GALC 36428

Name: GALC	Sequence: fasta or formatted (407aa)		NCBI GI: 83281452
Description: galactosylceramidase isoform b precursor		Referenced in: Sphingomyelin, Ceramides, and Glycolipids Lysosomes and Related Organelles
Other entries for this name: alt prot [685aa] galactosylceramidase isoform a precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.1 33 3 C cysteine 1.5 6 3 D aspartate 4.7 19 2 E glutamate 4.2 17 1 F phenylalanine 2.5 10 1 G glycine 9.8 40 3 H histidine 2.2 9 1 I isoleucine 5.9 24 3 K lysine 4.9 20 2 L leucine 10.8 44 3 M methionine 2.5 10 1 N asparagine 4.9 20 1 P proline 3.7 15 1 Q glutamine 2.7 11 1 R arginine 3.4 14 2 S serine 6.6 27 2 T threonine 5.2 21 2 V valine 5.2 21 2 W tryptophan 4.4 18 2 Y tyrosine 6.9 28 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 galactosylceramidase isoform b precursor GALC 0.941 galactosylceramidase isoform a precursor KIAA1199 0.011 KIAA1199 SLC6A6 0.006 solute carrier family 6 (neurotransmitter transport... SLC6A6 0.006 solute carrier family 6 (neurotransmitter transport... SLC6A6 0.006 solute carrier family 6 (neurotransmitter transporte... LOC100293676 0.005 PREDICTED: similar to Fc fragment of IgG binding pr... CAPN11 0.005 calpain 11 TMEM2 0.005 transmembrane protein 2 isoform b TMEM2 0.005 transmembrane protein 2 isoform a Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.