Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Search of human proteins with 7705574

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|7705574 killer cell lectin-like receptor subfamily F, member
1 [Homo sapiens]
         (231 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|7705574 killer cell lectin-like receptor subfamily F, member ...   476   e-135
gi|4504879 killer cell lectin-like receptor subfamily B, member ...   100   1e-21
gi|47717096 killer cell lectin-like receptor subfamily G, member...    89   4e-18
gi|223029517 CD209 molecule isoform 8 [Homo sapiens]                   87   9e-18
gi|223029386 CD209 molecule isoform 3 [Homo sapiens]                   77   1e-14
gi|223029384 CD209 molecule isoform 7 [Homo sapiens]                   77   1e-14
gi|223029382 CD209 molecule isoform 6 [Homo sapiens]                   77   1e-14
gi|223029380 CD209 molecule isoform 5 [Homo sapiens]                   77   1e-14
gi|10863957 CD209 molecule isoform 1 [Homo sapiens]                    77   1e-14
gi|37675373 dendritic cell-associated C-type lectin 1 isoform a ...    75   6e-14
gi|18426877 asialoglycoprotein receptor 2 isoform c [Homo sapiens]     75   6e-14
gi|18426875 asialoglycoprotein receptor 2 isoform b [Homo sapiens]     75   6e-14
gi|18426873 asialoglycoprotein receptor 2 isoform a [Homo sapiens]     75   6e-14
gi|4502253 asialoglycoprotein receptor 2 isoform a [Homo sapiens]      75   6e-14
gi|37577103 C-type lectin-like receptor-1 [Homo sapiens]               75   6e-14
gi|223278347 C-type lectin domain family 4, member M isoform 9 [...    74   8e-14
gi|223278339 C-type lectin domain family 4, member M isoform 7 [...    74   8e-14
gi|223278337 C-type lectin domain family 4, member M isoform 12 ...    74   8e-14
gi|223278335 C-type lectin domain family 4, member M isoform 2 [...    74   8e-14
gi|223278350 C-type lectin domain family 4, member M isoform 8 [...    74   8e-14
gi|223278342 C-type lectin domain family 4, member M isoform 11 ...    74   8e-14
gi|42542390 C-type lectin domain family 4, member M isoform 1 [H...    74   8e-14
gi|167614498 killer cell lectin-like receptor subfamily D, membe...    74   1e-13
gi|4504889 killer cell lectin-like receptor subfamily D, member ...    74   1e-13
gi|194018501 C-type lectin domain family 12, member B isoform 1 ...    74   1e-13
gi|168229214 C-type lectin domain family 2, member L [Homo sapiens]    74   1e-13
gi|37675379 dendritic cell-associated C-type lectin 1 isoform e ...    72   3e-13
gi|13384604 dendritic cell-associated C-type lectin 1 isoform b ...    72   3e-13
gi|223029388 CD209 molecule isoform 4 [Homo sapiens]                   72   5e-13
gi|4505501 oxidized low density lipoprotein (lectin-like) recept...    71   9e-13

>gi|7705574 killer cell lectin-like receptor subfamily F, member 1
           [Homo sapiens]
          Length = 231

 Score =  476 bits (1226), Expect = e-135
 Identities = 231/231 (100%), Positives = 231/231 (100%)

Query: 1   MQDEERYMTLNVQSKKRSSAQTSQLTFKDYSVTLHWYKILLGISGTVNGILTLTLISLIL 60
           MQDEERYMTLNVQSKKRSSAQTSQLTFKDYSVTLHWYKILLGISGTVNGILTLTLISLIL
Sbjct: 1   MQDEERYMTLNVQSKKRSSAQTSQLTFKDYSVTLHWYKILLGISGTVNGILTLTLISLIL 60

Query: 61  LVSQGVLLKCQKGSCSNATQYEDTGDLKVNNGTRRNISNKDLCASRSADQTVLCQSEWLK 120
           LVSQGVLLKCQKGSCSNATQYEDTGDLKVNNGTRRNISNKDLCASRSADQTVLCQSEWLK
Sbjct: 61  LVSQGVLLKCQKGSCSNATQYEDTGDLKVNNGTRRNISNKDLCASRSADQTVLCQSEWLK 120

Query: 121 YQGKCYWFSNEMKSWSDSYVYCLERKSHLLIIHDQLEMAFIQKNLRQLNYVWIGLNFTSL 180
           YQGKCYWFSNEMKSWSDSYVYCLERKSHLLIIHDQLEMAFIQKNLRQLNYVWIGLNFTSL
Sbjct: 121 YQGKCYWFSNEMKSWSDSYVYCLERKSHLLIIHDQLEMAFIQKNLRQLNYVWIGLNFTSL 180

Query: 181 KMTWTWVDGSPIDSKIFFIKGPAKENSCAAIKESKIFSETCSSVFKWICQY 231
           KMTWTWVDGSPIDSKIFFIKGPAKENSCAAIKESKIFSETCSSVFKWICQY
Sbjct: 181 KMTWTWVDGSPIDSKIFFIKGPAKENSCAAIKESKIFSETCSSVFKWICQY 231


>gi|4504879 killer cell lectin-like receptor subfamily B, member 1
           [Homo sapiens]
          Length = 225

 Score =  100 bits (249), Expect = 1e-21
 Identities = 67/231 (29%), Positives = 109/231 (47%), Gaps = 21/231 (9%)

Query: 1   MQDEERYMTLNVQSKKRSSAQTSQLTFKDYSVTLHWYKILLGISGTVNGILTLTLISLIL 60
           M  +  Y  LN+ +     + +     +D      W++  L +S    GI+ L L+   L
Sbjct: 1   MDQQAIYAELNLPTDSGPESSSPSSLPRDVCQGSPWHQFALKLSCA--GIILLVLVVTGL 58

Query: 61  LVSQGVLLKCQKGSCSNATQYEDTGDLKVNNGTRRNISNKDLCASRSADQTVLCQSEWLK 120
            VS   L+  QK S    +   D    +     R  + N              C   W +
Sbjct: 59  SVSVTSLI--QKSSIEKCSV--DIQQSRNKTTERPGLLN--------------CPIYWQQ 100

Query: 121 YQGKCYWFSNEMKSWSDSYVYCLERKSHLLIIHDQLEMAFIQKNLRQLNYV-WIGLNFTS 179
            + KC  FS+ +  W++S   C  ++S LL+I D+ E+   Q  +R    + WIGLNF+ 
Sbjct: 101 LREKCLLFSHTVNPWNNSLADCSTKESSLLLIRDKDELIHTQNLIRDKAILFWIGLNFSL 160

Query: 180 LKMTWTWVDGSPIDSKIFFIKGPAKENSCAAIKESKIFSETCSSVFKWICQ 230
            +  W W++GS ++S    I+G AKENSC +I ++ ++SE CS+  +WICQ
Sbjct: 161 SEKNWKWINGSFLNSNDLEIRGDAKENSCISISQTSVYSEYCSTEIRWICQ 211


>gi|47717096 killer cell lectin-like receptor subfamily G, member 1
           [Homo sapiens]
          Length = 189

 Score = 88.6 bits (218), Expect = 4e-18
 Identities = 48/133 (36%), Positives = 69/133 (51%), Gaps = 11/133 (8%)

Query: 98  SNKDLCASRSADQTVLCQSEWLKYQGKCYWFSNEMKSWSDSYVYCLERKSHLLIIHDQLE 157
           SN   CAS  +     C   W+KY   CY+FS E K W+ S  +CL R SHLL+I D  E
Sbjct: 64  SNYSTCASCPS-----CPDRWMKYGNHCYYFSVEEKDWNSSLEFCLARDSHLLVITDNQE 118

Query: 158 MAFIQKNLRQLNYVWIGLNFTSLKMTWTWVDGSPIDSKIFFIKGPAKENSCAAIKESKIF 217
           M+ +Q  L +  + WIGL   S    W W DGSP++     I   +   +C AI ++ + 
Sbjct: 119 MSLLQVFLSEA-FCWIGLRNNS---GWRWEDGSPLN--FSRISSNSFVQTCGAINKNGLQ 172

Query: 218 SETCSSVFKWICQ 230
           + +C     W+C+
Sbjct: 173 ASSCEVPLHWVCK 185


>gi|223029517 CD209 molecule isoform 8 [Homo sapiens]
          Length = 243

 Score = 87.4 bits (215), Expect = 9e-18
 Identities = 62/200 (31%), Positives = 96/200 (48%), Gaps = 19/200 (9%)

Query: 37  YKILLGISGTVNGILTLTLISLILLVSQGVLLKCQKGSCSNATQYEDTGDLKVNNGTRRN 96
           YK L G  G  +G L L L+S  LL   G+L++  K   S+ +Q +   D    N T+  
Sbjct: 31  YKSLAGCLG--HGPLVLQLLSFTLLA--GLLVQVSKVP-SSISQEQSRQDAIYQNLTQLK 85

Query: 97  ISNKDLCASRSADQTVLCQSEWLKYQGKCYWFSNEMKSWSDSYVYCLERKSHLLIIHDQL 156
            + + LC          C  EW  +QG CY+ SN  ++W DS   C E  + L++I    
Sbjct: 86  AAVERLCHP--------CPWEWTFFQGNCYFMSNSQRNWHDSITACKEVGAQLVVIKSAE 137

Query: 157 EMAFIQ-KNLRQLNYVWIGLNFTSLKMTWTWVDGSPI--DSKIFFIKGPAK---ENSCAA 210
           E  F+Q ++ R   + W+GL+  + + TW WVDGSP+    K ++ +G      E  CA 
Sbjct: 138 EQNFLQLQSSRSNRFTWMGLSDLNQEGTWQWVDGSPLLPSFKQYWNRGEPNNVGEEDCAE 197

Query: 211 IKESKIFSETCSSVFKWICQ 230
              +    + C+    WIC+
Sbjct: 198 FSGNGWNDDKCNLAKFWICK 217


>gi|223029386 CD209 molecule isoform 3 [Homo sapiens]
          Length = 380

 Score = 77.4 bits (189), Expect = 1e-14
 Identities = 40/123 (32%), Positives = 63/123 (51%), Gaps = 6/123 (4%)

Query: 114 CQSEWLKYQGKCYWFSNEMKSWSDSYVYCLERKSHLLIIHDQLEMAFIQ-KNLRQLNYVW 172
           C  EW  +QG CY+ SN  ++W DS   C E  + L++I    E  F+Q ++ R   + W
Sbjct: 232 CPWEWTFFQGNCYFMSNSQRNWHDSITACKEVGAQLVVIKSAEEQNFLQLQSSRSNRFTW 291

Query: 173 IGLNFTSLKMTWTWVDGSPI--DSKIFFIKGPAK---ENSCAAIKESKIFSETCSSVFKW 227
           +GL+  + + TW WVDGSP+    K ++ +G      E  CA    +    + C+    W
Sbjct: 292 MGLSDLNQEGTWQWVDGSPLLPSFKQYWNRGEPNNVGEEDCAEFSGNGWNDDKCNLAKFW 351

Query: 228 ICQ 230
           IC+
Sbjct: 352 ICK 354


>gi|223029384 CD209 molecule isoform 7 [Homo sapiens]
          Length = 312

 Score = 77.4 bits (189), Expect = 1e-14
 Identities = 40/123 (32%), Positives = 63/123 (51%), Gaps = 6/123 (4%)

Query: 114 CQSEWLKYQGKCYWFSNEMKSWSDSYVYCLERKSHLLIIHDQLEMAFIQ-KNLRQLNYVW 172
           C  EW  +QG CY+ SN  ++W DS   C E  + L++I    E  F+Q ++ R   + W
Sbjct: 164 CPWEWTFFQGNCYFMSNSQRNWHDSITACKEVGAQLVVIKSAEEQNFLQLQSSRSNRFTW 223

Query: 173 IGLNFTSLKMTWTWVDGSPI--DSKIFFIKGPAK---ENSCAAIKESKIFSETCSSVFKW 227
           +GL+  + + TW WVDGSP+    K ++ +G      E  CA    +    + C+    W
Sbjct: 224 MGLSDLNQEGTWQWVDGSPLLPSFKQYWNRGEPNNVGEEDCAEFSGNGWNDDKCNLAKFW 283

Query: 228 ICQ 230
           IC+
Sbjct: 284 ICK 286


>gi|223029382 CD209 molecule isoform 6 [Homo sapiens]
          Length = 360

 Score = 77.4 bits (189), Expect = 1e-14
 Identities = 40/123 (32%), Positives = 63/123 (51%), Gaps = 6/123 (4%)

Query: 114 CQSEWLKYQGKCYWFSNEMKSWSDSYVYCLERKSHLLIIHDQLEMAFIQ-KNLRQLNYVW 172
           C  EW  +QG CY+ SN  ++W DS   C E  + L++I    E  F+Q ++ R   + W
Sbjct: 212 CPWEWTFFQGNCYFMSNSQRNWHDSITACKEVGAQLVVIKSAEEQNFLQLQSSRSNRFTW 271

Query: 173 IGLNFTSLKMTWTWVDGSPI--DSKIFFIKGPAK---ENSCAAIKESKIFSETCSSVFKW 227
           +GL+  + + TW WVDGSP+    K ++ +G      E  CA    +    + C+    W
Sbjct: 272 MGLSDLNQEGTWQWVDGSPLLPSFKQYWNRGEPNNVGEEDCAEFSGNGWNDDKCNLAKFW 331

Query: 228 ICQ 230
           IC+
Sbjct: 332 ICK 334


>gi|223029380 CD209 molecule isoform 5 [Homo sapiens]
          Length = 268

 Score = 77.4 bits (189), Expect = 1e-14
 Identities = 40/123 (32%), Positives = 63/123 (51%), Gaps = 6/123 (4%)

Query: 114 CQSEWLKYQGKCYWFSNEMKSWSDSYVYCLERKSHLLIIHDQLEMAFIQ-KNLRQLNYVW 172
           C  EW  +QG CY+ SN  ++W DS   C E  + L++I    E  F+Q ++ R   + W
Sbjct: 120 CPWEWTFFQGNCYFMSNSQRNWHDSITACKEVGAQLVVIKSAEEQNFLQLQSSRSNRFTW 179

Query: 173 IGLNFTSLKMTWTWVDGSPI--DSKIFFIKGPAK---ENSCAAIKESKIFSETCSSVFKW 227
           +GL+  + + TW WVDGSP+    K ++ +G      E  CA    +    + C+    W
Sbjct: 180 MGLSDLNQEGTWQWVDGSPLLPSFKQYWNRGEPNNVGEEDCAEFSGNGWNDDKCNLAKFW 239

Query: 228 ICQ 230
           IC+
Sbjct: 240 ICK 242


>gi|10863957 CD209 molecule isoform 1 [Homo sapiens]
          Length = 404

 Score = 77.4 bits (189), Expect = 1e-14
 Identities = 40/123 (32%), Positives = 63/123 (51%), Gaps = 6/123 (4%)

Query: 114 CQSEWLKYQGKCYWFSNEMKSWSDSYVYCLERKSHLLIIHDQLEMAFIQ-KNLRQLNYVW 172
           C  EW  +QG CY+ SN  ++W DS   C E  + L++I    E  F+Q ++ R   + W
Sbjct: 256 CPWEWTFFQGNCYFMSNSQRNWHDSITACKEVGAQLVVIKSAEEQNFLQLQSSRSNRFTW 315

Query: 173 IGLNFTSLKMTWTWVDGSPI--DSKIFFIKGPAK---ENSCAAIKESKIFSETCSSVFKW 227
           +GL+  + + TW WVDGSP+    K ++ +G      E  CA    +    + C+    W
Sbjct: 316 MGLSDLNQEGTWQWVDGSPLLPSFKQYWNRGEPNNVGEEDCAEFSGNGWNDDKCNLAKFW 375

Query: 228 ICQ 230
           IC+
Sbjct: 376 ICK 378


>gi|37675373 dendritic cell-associated C-type lectin 1 isoform a
           [Homo sapiens]
          Length = 247

 Score = 74.7 bits (182), Expect = 6e-14
 Identities = 61/239 (25%), Positives = 105/239 (43%), Gaps = 18/239 (7%)

Query: 3   DEERYMTLNVQSKKRSSAQTSQLTFKDYSVTLHWYKILLGISGTVNGILTLTLISLILLV 62
           DE+ Y  L+  S+  S+ + + ++ K        ++++      + GIL L ++ + +++
Sbjct: 11  DEDGYTQLHFDSQ--SNTRIAVVSEKGSCAASPPWRLI----AVILGILCLVILVIAVVL 64

Query: 63  SQGVLLKCQKGSCSNATQYEDTGDLKVNNGTRRNISNKDLCASRSADQTV-----LCQSE 117
               + +   GS +    Y  + + K N+      S +D      A +T       C   
Sbjct: 65  GTMAIWRSNSGSNTLENGYFLSRN-KENHSQPTQSSLEDSVTPTKAVKTTGVLSSPCPPN 123

Query: 118 WLKYQGKCYWFSNEMKSWSDSYVYCLERKSHLLIIHDQLEMAFIQKNLRQL--NYVWIGL 175
           W+ Y+  CY FS  + SW  S   C +  S+LL I    E+ FI K +     N  WIGL
Sbjct: 124 WIIYEKSCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSNELGFIVKQVSSQPDNSFWIGL 183

Query: 176 NFTSLKMTWTWVDGSPIDSKIFFIKGPAKEN----SCAAIKESKIFSETCSSVFKWICQ 230
           +    ++ W W DGS   S +F I+  A +     +C  I  S I+ + CS     IC+
Sbjct: 184 SRPQTEVPWLWEDGSTFSSNLFQIRTTATQENPSPNCVWIHVSVIYDQLCSVPSYSICE 242


>gi|18426877 asialoglycoprotein receptor 2 isoform c [Homo sapiens]
          Length = 292

 Score = 74.7 bits (182), Expect = 6e-14
 Identities = 38/135 (28%), Positives = 66/135 (48%), Gaps = 14/135 (10%)

Query: 107 SADQTVLCQSEWLKYQGKCYWFSNEMKSWSDSYVYCLERKSHLLIIHDQLEMAFIQKNLR 166
           +  Q   C   W+++QG CYWFS+  K+W+++  YC    +HL++I+   E  FI ++  
Sbjct: 151 NGSQRTCCPVNWVEHQGSCYWFSHSGKAWAEAEKYCQLENAHLVVINSWEEQKFIVQHTN 210

Query: 167 QLNYVWIGLNFTSLKMTWTWVDGSPI--DSKIFFIKGP---------AKENSCAAIKESK 215
             N  WIGL  T    +W WVDG+    + K + +  P           E+      + +
Sbjct: 211 PFN-TWIGL--TDSDGSWKWVDGTDYRHNYKNWAVTQPDNWHGHELGGSEDCVEVQPDGR 267

Query: 216 IFSETCSSVFKWICQ 230
              + C  V++W+C+
Sbjct: 268 WNDDFCLQVYRWVCE 282


>gi|18426875 asialoglycoprotein receptor 2 isoform b [Homo sapiens]
          Length = 287

 Score = 74.7 bits (182), Expect = 6e-14
 Identities = 38/135 (28%), Positives = 66/135 (48%), Gaps = 14/135 (10%)

Query: 107 SADQTVLCQSEWLKYQGKCYWFSNEMKSWSDSYVYCLERKSHLLIIHDQLEMAFIQKNLR 166
           +  Q   C   W+++QG CYWFS+  K+W+++  YC    +HL++I+   E  FI ++  
Sbjct: 146 NGSQRTCCPVNWVEHQGSCYWFSHSGKAWAEAEKYCQLENAHLVVINSWEEQKFIVQHTN 205

Query: 167 QLNYVWIGLNFTSLKMTWTWVDGSPI--DSKIFFIKGP---------AKENSCAAIKESK 215
             N  WIGL  T    +W WVDG+    + K + +  P           E+      + +
Sbjct: 206 PFN-TWIGL--TDSDGSWKWVDGTDYRHNYKNWAVTQPDNWHGHELGGSEDCVEVQPDGR 262

Query: 216 IFSETCSSVFKWICQ 230
              + C  V++W+C+
Sbjct: 263 WNDDFCLQVYRWVCE 277


>gi|18426873 asialoglycoprotein receptor 2 isoform a [Homo sapiens]
          Length = 311

 Score = 74.7 bits (182), Expect = 6e-14
 Identities = 38/135 (28%), Positives = 66/135 (48%), Gaps = 14/135 (10%)

Query: 107 SADQTVLCQSEWLKYQGKCYWFSNEMKSWSDSYVYCLERKSHLLIIHDQLEMAFIQKNLR 166
           +  Q   C   W+++QG CYWFS+  K+W+++  YC    +HL++I+   E  FI ++  
Sbjct: 170 NGSQRTCCPVNWVEHQGSCYWFSHSGKAWAEAEKYCQLENAHLVVINSWEEQKFIVQHTN 229

Query: 167 QLNYVWIGLNFTSLKMTWTWVDGSPI--DSKIFFIKGP---------AKENSCAAIKESK 215
             N  WIGL  T    +W WVDG+    + K + +  P           E+      + +
Sbjct: 230 PFN-TWIGL--TDSDGSWKWVDGTDYRHNYKNWAVTQPDNWHGHELGGSEDCVEVQPDGR 286

Query: 216 IFSETCSSVFKWICQ 230
              + C  V++W+C+
Sbjct: 287 WNDDFCLQVYRWVCE 301


>gi|4502253 asialoglycoprotein receptor 2 isoform a [Homo sapiens]
          Length = 311

 Score = 74.7 bits (182), Expect = 6e-14
 Identities = 38/135 (28%), Positives = 66/135 (48%), Gaps = 14/135 (10%)

Query: 107 SADQTVLCQSEWLKYQGKCYWFSNEMKSWSDSYVYCLERKSHLLIIHDQLEMAFIQKNLR 166
           +  Q   C   W+++QG CYWFS+  K+W+++  YC    +HL++I+   E  FI ++  
Sbjct: 170 NGSQRTCCPVNWVEHQGSCYWFSHSGKAWAEAEKYCQLENAHLVVINSWEEQKFIVQHTN 229

Query: 167 QLNYVWIGLNFTSLKMTWTWVDGSPI--DSKIFFIKGP---------AKENSCAAIKESK 215
             N  WIGL  T    +W WVDG+    + K + +  P           E+      + +
Sbjct: 230 PFN-TWIGL--TDSDGSWKWVDGTDYRHNYKNWAVTQPDNWHGHELGGSEDCVEVQPDGR 286

Query: 216 IFSETCSSVFKWICQ 230
              + C  V++W+C+
Sbjct: 287 WNDDFCLQVYRWVCE 301


>gi|37577103 C-type lectin-like receptor-1 [Homo sapiens]
          Length = 280

 Score = 74.7 bits (182), Expect = 6e-14
 Identities = 58/206 (28%), Positives = 88/206 (42%), Gaps = 26/206 (12%)

Query: 50  ILTLTLISLILLVSQGVLLKCQKGSCSNATQ-------------YEDTGDLKVNN----G 92
           +LTL L+ LI L + G+L   Q    SN  Q              ++   L+V N    G
Sbjct: 54  LLTLCLVLLIGLAALGLLF-FQYYQLSNTGQDTISQMEERLGNTSQELQSLQVQNIKLAG 112

Query: 93  TRRNISNK---DLCASRSADQTVLCQSEWLKYQGKCYWFSNEMKSWSDSYVYCLERKSHL 149
           + ++++ K   +L     A +   C  +W  +   CY F  + KSW D   +CL   S +
Sbjct: 113 SLQHVAEKLCRELYNKAGAHRCSPCTEQWKWHGDNCYQFYKDSKSWEDCKYFCLSENSTM 172

Query: 150 LIIHDQ--LEMAFIQKNLRQLNYVWIGLNFTSLKMTWTWVDGSPIDSKIFFI---KGPAK 204
           L I+ Q  LE A  Q         W GL        W W+DG+P  S++F I       +
Sbjct: 173 LKINKQEDLEFAASQSYSEFFYSYWTGLLRPDSGKAWLWMDGTPFTSELFHIIIDVTSPR 232

Query: 205 ENSCAAIKESKIFSETCSSVFKWICQ 230
              C AI    IFS+ C  + + +C+
Sbjct: 233 SRDCVAILNGMIFSKDCKELKRCVCE 258


>gi|223278347 C-type lectin domain family 4, member M isoform 9
           [Homo sapiens]
          Length = 353

 Score = 74.3 bits (181), Expect = 8e-14
 Identities = 38/123 (30%), Positives = 58/123 (47%), Gaps = 6/123 (4%)

Query: 114 CQSEWLKYQGKCYWFSNEMKSWSDSYVYCLERKSHLLIIHDQLEMAFIQ-KNLRQLNYVW 172
           C  +W  +QG CY+ SN  ++W DS   C E ++ L++I    E  F+Q +  R   + W
Sbjct: 222 CPKDWTFFQGNCYFMSNSQRNWHDSVTACQEVRAQLVVIKTAEEQNFLQLQTSRSNRFSW 281

Query: 173 IGLNFTSLKMTWTWVDGSPIDSKIFFIKGPAKENS-----CAAIKESKIFSETCSSVFKW 227
           +GL+  + + TW WVDGSP+           + N+     CA    S      C     W
Sbjct: 282 MGLSDLNQEGTWQWVDGSPLSPSFQRYWNSGEPNNSGNEDCAEFSGSGWNDNRCDVDNYW 341

Query: 228 ICQ 230
           IC+
Sbjct: 342 ICK 344


>gi|223278339 C-type lectin domain family 4, member M isoform 7
           [Homo sapiens]
          Length = 263

 Score = 74.3 bits (181), Expect = 8e-14
 Identities = 38/123 (30%), Positives = 58/123 (47%), Gaps = 6/123 (4%)

Query: 114 CQSEWLKYQGKCYWFSNEMKSWSDSYVYCLERKSHLLIIHDQLEMAFIQ-KNLRQLNYVW 172
           C  +W  +QG CY+ SN  ++W DS   C E ++ L++I    E  F+Q +  R   + W
Sbjct: 132 CPKDWTFFQGNCYFMSNSQRNWHDSVTACQEVRAQLVVIKTAEEQNFLQLQTSRSNRFSW 191

Query: 173 IGLNFTSLKMTWTWVDGSPIDSKIFFIKGPAKENS-----CAAIKESKIFSETCSSVFKW 227
           +GL+  + + TW WVDGSP+           + N+     CA    S      C     W
Sbjct: 192 MGLSDLNQEGTWQWVDGSPLSPSFQRYWNSGEPNNSGNEDCAEFSGSGWNDNRCDVDNYW 251

Query: 228 ICQ 230
           IC+
Sbjct: 252 ICK 254


>gi|223278337 C-type lectin domain family 4, member M isoform 12
           [Homo sapiens]
          Length = 375

 Score = 74.3 bits (181), Expect = 8e-14
 Identities = 38/123 (30%), Positives = 58/123 (47%), Gaps = 6/123 (4%)

Query: 114 CQSEWLKYQGKCYWFSNEMKSWSDSYVYCLERKSHLLIIHDQLEMAFIQ-KNLRQLNYVW 172
           C  +W  +QG CY+ SN  ++W DS   C E ++ L++I    E  F+Q +  R   + W
Sbjct: 244 CPKDWTFFQGNCYFMSNSQRNWHDSVTACQEVRAQLVVIKTAEEQNFLQLQTSRSNRFSW 303

Query: 173 IGLNFTSLKMTWTWVDGSPIDSKIFFIKGPAKENS-----CAAIKESKIFSETCSSVFKW 227
           +GL+  + + TW WVDGSP+           + N+     CA    S      C     W
Sbjct: 304 MGLSDLNQEGTWQWVDGSPLSPSFQRYWNSGEPNNSGNEDCAEFSGSGWNDNRCDVDNYW 363

Query: 228 ICQ 230
           IC+
Sbjct: 364 ICK 366


>gi|223278335 C-type lectin domain family 4, member M isoform 2
           [Homo sapiens]
          Length = 348

 Score = 74.3 bits (181), Expect = 8e-14
 Identities = 38/123 (30%), Positives = 58/123 (47%), Gaps = 6/123 (4%)

Query: 114 CQSEWLKYQGKCYWFSNEMKSWSDSYVYCLERKSHLLIIHDQLEMAFIQ-KNLRQLNYVW 172
           C  +W  +QG CY+ SN  ++W DS   C E ++ L++I    E  F+Q +  R   + W
Sbjct: 217 CPKDWTFFQGNCYFMSNSQRNWHDSVTACQEVRAQLVVIKTAEEQNFLQLQTSRSNRFSW 276

Query: 173 IGLNFTSLKMTWTWVDGSPIDSKIFFIKGPAKENS-----CAAIKESKIFSETCSSVFKW 227
           +GL+  + + TW WVDGSP+           + N+     CA    S      C     W
Sbjct: 277 MGLSDLNQEGTWQWVDGSPLSPSFQRYWNSGEPNNSGNEDCAEFSGSGWNDNRCDVDNYW 336

Query: 228 ICQ 230
           IC+
Sbjct: 337 ICK 339


>gi|223278350 C-type lectin domain family 4, member M isoform 8
           [Homo sapiens]
          Length = 376

 Score = 74.3 bits (181), Expect = 8e-14
 Identities = 38/123 (30%), Positives = 58/123 (47%), Gaps = 6/123 (4%)

Query: 114 CQSEWLKYQGKCYWFSNEMKSWSDSYVYCLERKSHLLIIHDQLEMAFIQ-KNLRQLNYVW 172
           C  +W  +QG CY+ SN  ++W DS   C E ++ L++I    E  F+Q +  R   + W
Sbjct: 245 CPKDWTFFQGNCYFMSNSQRNWHDSVTACQEVRAQLVVIKTAEEQNFLQLQTSRSNRFSW 304

Query: 173 IGLNFTSLKMTWTWVDGSPIDSKIFFIKGPAKENS-----CAAIKESKIFSETCSSVFKW 227
           +GL+  + + TW WVDGSP+           + N+     CA    S      C     W
Sbjct: 305 MGLSDLNQEGTWQWVDGSPLSPSFQRYWNSGEPNNSGNEDCAEFSGSGWNDNRCDVDNYW 364

Query: 228 ICQ 230
           IC+
Sbjct: 365 ICK 367


>gi|223278342 C-type lectin domain family 4, member M isoform 11
           [Homo sapiens]
          Length = 332

 Score = 74.3 bits (181), Expect = 8e-14
 Identities = 38/123 (30%), Positives = 58/123 (47%), Gaps = 6/123 (4%)

Query: 114 CQSEWLKYQGKCYWFSNEMKSWSDSYVYCLERKSHLLIIHDQLEMAFIQ-KNLRQLNYVW 172
           C  +W  +QG CY+ SN  ++W DS   C E ++ L++I    E  F+Q +  R   + W
Sbjct: 201 CPKDWTFFQGNCYFMSNSQRNWHDSVTACQEVRAQLVVIKTAEEQNFLQLQTSRSNRFSW 260

Query: 173 IGLNFTSLKMTWTWVDGSPIDSKIFFIKGPAKENS-----CAAIKESKIFSETCSSVFKW 227
           +GL+  + + TW WVDGSP+           + N+     CA    S      C     W
Sbjct: 261 MGLSDLNQEGTWQWVDGSPLSPSFQRYWNSGEPNNSGNEDCAEFSGSGWNDNRCDVDNYW 320

Query: 228 ICQ 230
           IC+
Sbjct: 321 ICK 323


>gi|42542390 C-type lectin domain family 4, member M isoform 1 [Homo
           sapiens]
          Length = 399

 Score = 74.3 bits (181), Expect = 8e-14
 Identities = 38/123 (30%), Positives = 58/123 (47%), Gaps = 6/123 (4%)

Query: 114 CQSEWLKYQGKCYWFSNEMKSWSDSYVYCLERKSHLLIIHDQLEMAFIQ-KNLRQLNYVW 172
           C  +W  +QG CY+ SN  ++W DS   C E ++ L++I    E  F+Q +  R   + W
Sbjct: 268 CPKDWTFFQGNCYFMSNSQRNWHDSVTACQEVRAQLVVIKTAEEQNFLQLQTSRSNRFSW 327

Query: 173 IGLNFTSLKMTWTWVDGSPIDSKIFFIKGPAKENS-----CAAIKESKIFSETCSSVFKW 227
           +GL+  + + TW WVDGSP+           + N+     CA    S      C     W
Sbjct: 328 MGLSDLNQEGTWQWVDGSPLSPSFQRYWNSGEPNNSGNEDCAEFSGSGWNDNRCDVDNYW 387

Query: 228 ICQ 230
           IC+
Sbjct: 388 ICK 390


>gi|167614498 killer cell lectin-like receptor subfamily D, member 1
           isoform 1 [Homo sapiens]
          Length = 179

 Score = 73.6 bits (179), Expect = 1e-13
 Identities = 45/180 (25%), Positives = 83/180 (46%), Gaps = 20/180 (11%)

Query: 52  TLTLISLILLVSQGVLLKCQKGSCSNATQYEDTGDLKVNNGTRRNISNKDLCASRSADQT 111
           TL +I L L+ + G+LLK      S    +    ++++         + D C+       
Sbjct: 15  TLGIICLSLMATLGILLKNSFTKLSIEPAFTPGPNIELQK-------DSDCCS------- 60

Query: 112 VLCQSEWLKYQGKCYWFSNEMKSWSDSYVYCLERKSHLLIIHDQLEMAFIQKNLRQLNYV 171
             CQ +W+ Y+  CY+ S+E K+W++S   C  +KS LL + +  E+ F+  + +   + 
Sbjct: 61  --CQEKWVGYRCNCYFISSEQKTWNESRHLCASQKSSLLQLQNTDELDFMSSSQQ---FY 115

Query: 172 WIGLNFTSLKMTWTWVDGSPIDSKIFFIKGPAKENSCAAIK-ESKIFSETCSSVFKWICQ 230
           WIGL+++     W W +GS +   +F         +C A         E+C    ++IC+
Sbjct: 116 WIGLSYSEEHTAWLWENGSALSQYLFPSFETFNTKNCIAYNPNGNALDESCEDKNRYICK 175


>gi|4504889 killer cell lectin-like receptor subfamily D, member 1
           isoform 1 [Homo sapiens]
          Length = 179

 Score = 73.6 bits (179), Expect = 1e-13
 Identities = 45/180 (25%), Positives = 83/180 (46%), Gaps = 20/180 (11%)

Query: 52  TLTLISLILLVSQGVLLKCQKGSCSNATQYEDTGDLKVNNGTRRNISNKDLCASRSADQT 111
           TL +I L L+ + G+LLK      S    +    ++++         + D C+       
Sbjct: 15  TLGIICLSLMATLGILLKNSFTKLSIEPAFTPGPNIELQK-------DSDCCS------- 60

Query: 112 VLCQSEWLKYQGKCYWFSNEMKSWSDSYVYCLERKSHLLIIHDQLEMAFIQKNLRQLNYV 171
             CQ +W+ Y+  CY+ S+E K+W++S   C  +KS LL + +  E+ F+  + +   + 
Sbjct: 61  --CQEKWVGYRCNCYFISSEQKTWNESRHLCASQKSSLLQLQNTDELDFMSSSQQ---FY 115

Query: 172 WIGLNFTSLKMTWTWVDGSPIDSKIFFIKGPAKENSCAAIK-ESKIFSETCSSVFKWICQ 230
           WIGL+++     W W +GS +   +F         +C A         E+C    ++IC+
Sbjct: 116 WIGLSYSEEHTAWLWENGSALSQYLFPSFETFNTKNCIAYNPNGNALDESCEDKNRYICK 175


>gi|194018501 C-type lectin domain family 12, member B isoform 1
           [Homo sapiens]
          Length = 276

 Score = 73.6 bits (179), Expect = 1e-13
 Identities = 39/122 (31%), Positives = 62/122 (50%), Gaps = 5/122 (4%)

Query: 114 CQSEWLKYQGKCYWFS-NEMKSWSDSYVYCLERKSHLLIIHDQLEMAFIQKN-LRQLNYV 171
           C   W  YQ  CY+F+ NE K+W++S   C+++ S L+ I    E  F+    L   ++ 
Sbjct: 143 CPKMWQWYQNSCYYFTTNEEKTWANSRKDCIDKNSTLVKIDSLEEKDFLMSQPLLMFSFF 202

Query: 172 WIGLNFTSLKMTWTWVDGSPIDSKIFFIKGPAKEN---SCAAIKESKIFSETCSSVFKWI 228
           W+GL++ S   +W W DGS     +F  K   + N    CA  ++  I+   CS+   WI
Sbjct: 203 WLGLSWDSSGRSWFWEDGSVPSPSLFSTKELDQINGSKGCAYFQKGNIYISRCSAEIFWI 262

Query: 229 CQ 230
           C+
Sbjct: 263 CE 264


>gi|168229214 C-type lectin domain family 2, member L [Homo sapiens]
          Length = 214

 Score = 73.6 bits (179), Expect = 1e-13
 Identities = 38/116 (32%), Positives = 58/116 (50%), Gaps = 7/116 (6%)

Query: 114 CQSEWLKYQGKCYWFSNEMKSWSDSYVYCLERKSHLLIIHDQLEMAFIQKNLRQLNYVWI 173
           C  +WL Y  KCY+FS E + W+    YC   ++ L +I  Q E+ F+ K  R+    WI
Sbjct: 100 CPEDWLLYGRKCYFFSEEPRDWNTGRQYCHTHEAVLAVIQSQKELEFMFKFTRR--EPWI 157

Query: 174 GLNFTSLKMTWTWVDGSPIDSKIFFIKGPAKENSCAAIKESKIFSETCSSVFKWIC 229
           GL    +   + WV+G P D   F I GP +   C  ++ +++ S  C     W+C
Sbjct: 158 GLR--RVGDEFHWVNGDPFDPDTFTIAGPGE---CVFVEPTRLVSTECLMTRPWVC 208


>gi|37675379 dendritic cell-associated C-type lectin 1 isoform e
           [Homo sapiens]
          Length = 168

 Score = 72.4 bits (176), Expect = 3e-13
 Identities = 41/123 (33%), Positives = 58/123 (47%), Gaps = 6/123 (4%)

Query: 114 CQSEWLKYQGKCYWFSNEMKSWSDSYVYCLERKSHLLIIHDQLEMAFIQKNLRQL--NYV 171
           C   W+ Y+  CY FS  + SW  S   C +  S+LL I    E+ FI K +     N  
Sbjct: 41  CPPNWIIYEKSCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSNELGFIVKQVSSQPDNSF 100

Query: 172 WIGLNFTSLKMTWTWVDGSPIDSKIFFIKGPAKEN----SCAAIKESKIFSETCSSVFKW 227
           WIGL+    ++ W W DGS   S +F I+  A +     +C  I  S I+ + CS     
Sbjct: 101 WIGLSRPQTEVPWLWEDGSTFSSNLFQIRTTATQENPSPNCVWIHVSVIYDQLCSVPSYS 160

Query: 228 ICQ 230
           IC+
Sbjct: 161 ICE 163


>gi|13384604 dendritic cell-associated C-type lectin 1 isoform b
           [Homo sapiens]
          Length = 201

 Score = 72.4 bits (176), Expect = 3e-13
 Identities = 41/123 (33%), Positives = 58/123 (47%), Gaps = 6/123 (4%)

Query: 114 CQSEWLKYQGKCYWFSNEMKSWSDSYVYCLERKSHLLIIHDQLEMAFIQKNLRQL--NYV 171
           C   W+ Y+  CY FS  + SW  S   C +  S+LL I    E+ FI K +     N  
Sbjct: 74  CPPNWIIYEKSCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSNELGFIVKQVSSQPDNSF 133

Query: 172 WIGLNFTSLKMTWTWVDGSPIDSKIFFIKGPAKEN----SCAAIKESKIFSETCSSVFKW 227
           WIGL+    ++ W W DGS   S +F I+  A +     +C  I  S I+ + CS     
Sbjct: 134 WIGLSRPQTEVPWLWEDGSTFSSNLFQIRTTATQENPSPNCVWIHVSVIYDQLCSVPSYS 193

Query: 228 ICQ 230
           IC+
Sbjct: 194 ICE 196


>gi|223029388 CD209 molecule isoform 4 [Homo sapiens]
          Length = 398

 Score = 71.6 bits (174), Expect = 5e-13
 Identities = 38/122 (31%), Positives = 60/122 (49%), Gaps = 10/122 (8%)

Query: 114 CQSEWLKYQGKCYWFSNEMKSWSDSYVYCLERKSHLLIIHDQLEMAFIQKNLRQLNYVWI 173
           C  EW  +QG CY+ SN  ++W DS   C E  + L++I    E     ++ R   + W+
Sbjct: 256 CPWEWTFFQGNCYFMSNSQRNWHDSITACKEVGAQLVVIKSAEE-----QSSRSNRFTWM 310

Query: 174 GLNFTSLKMTWTWVDGSPI--DSKIFFIKGPAK---ENSCAAIKESKIFSETCSSVFKWI 228
           GL+  + + TW WVDGSP+    K ++ +G      E  CA    +    + C+    WI
Sbjct: 311 GLSDLNQEGTWQWVDGSPLLPSFKQYWNRGEPNNVGEEDCAEFSGNGWNDDKCNLAKFWI 370

Query: 229 CQ 230
           C+
Sbjct: 371 CK 372


>gi|4505501 oxidized low density lipoprotein (lectin-like) receptor
           1 [Homo sapiens]
          Length = 273

 Score = 70.9 bits (172), Expect = 9e-13
 Identities = 37/130 (28%), Positives = 65/130 (50%), Gaps = 5/130 (3%)

Query: 106 RSADQTVLCQSEWLKYQGKCYWFSNEMKSWSDSYVYCLERKSHLLIIHDQLEMAFIQKNL 165
           R A+ +  C  +W+ +   CY FS+   +W  S   CL   + LL I+   ++ FIQ+ +
Sbjct: 136 RVANCSAPCPQDWIWHGENCYLFSSGSFNWEKSQEKCLSLDAKLLKINSTADLDFIQQAI 195

Query: 166 RQLNY-VWIGLNFTSLKMTWTWVDGSPIDSKIFFIKGPAKE----NSCAAIKESKIFSET 220
              ++  W+GL+  +    W W DGSP+   +F ++G   +     +CA I+   +++E 
Sbjct: 196 SYSSFPFWMGLSRRNPSYPWLWEDGSPLMPHLFRVRGAVSQTYPSGTCAYIQRGAVYAEN 255

Query: 221 CSSVFKWICQ 230
           C      ICQ
Sbjct: 256 CILAAFSICQ 265


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.131    0.408 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,294,696
Number of Sequences: 37866
Number of extensions: 331637
Number of successful extensions: 915
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 102
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 677
Number of HSP's gapped (non-prelim): 174
length of query: 231
length of database: 18,247,518
effective HSP length: 99
effective length of query: 132
effective length of database: 14,498,784
effective search space: 1913839488
effective search space used: 1913839488
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press