Guide to the Human Genome
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Search of human proteins with 7705338

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|7705338 C-type lectin domain family 4, member A isoform 1
[Homo sapiens]
         (237 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|7705338 C-type lectin domain family 4, member A isoform 1 [Ho...   499   e-141
gi|37577119 C-type lectin domain family 4, member A isoform 2 [H...   415   e-116
gi|148536836 C-type lectin domain family 4, member A isoform 3 [...   404   e-113
gi|37577117 C-type lectin domain family 4, member A isoform 4 [H...   308   3e-84
gi|18466806 C-type lectin domain family 4, member C isoform 1 [H...   214   5e-56
gi|45580692 C-type lectin domain family 4, member C isoform 2 [H...   208   3e-54
gi|55742774 dectin-2 [Homo sapiens]                                   179   2e-45
gi|31542313 C-type lectin domain family 4, member D [Homo sapiens]    155   4e-38
gi|7657333 C-type lectin domain family 4, member E [Homo sapiens]     129   2e-30
gi|53832016 C-type lectin, superfamily member 14 isoform 2 [Homo...    97   2e-20
gi|33667103 C-type lectin, superfamily member 14 isoform 1 [Homo...    96   3e-20
gi|223278347 C-type lectin domain family 4, member M isoform 9 [...    89   3e-18
gi|223278339 C-type lectin domain family 4, member M isoform 7 [...    89   3e-18
gi|223278337 C-type lectin domain family 4, member M isoform 12 ...    89   3e-18
gi|223278335 C-type lectin domain family 4, member M isoform 2 [...    89   3e-18
gi|223278350 C-type lectin domain family 4, member M isoform 8 [...    89   3e-18
gi|223278342 C-type lectin domain family 4, member M isoform 11 ...    89   3e-18
gi|42542390 C-type lectin domain family 4, member M isoform 1 [H...    89   3e-18
gi|18426877 asialoglycoprotein receptor 2 isoform c [Homo sapiens]     86   2e-17
gi|18426875 asialoglycoprotein receptor 2 isoform b [Homo sapiens]     86   2e-17
gi|18426873 asialoglycoprotein receptor 2 isoform a [Homo sapiens]     86   2e-17
gi|4502253 asialoglycoprotein receptor 2 isoform a [Homo sapiens]      86   2e-17
gi|18641360 collectin sub-family member 12 [Homo sapiens]              85   6e-17
gi|4502251 asialoglycoprotein receptor 1 [Homo sapiens]                84   1e-16
gi|223029517 CD209 molecule isoform 8 [Homo sapiens]                   80   2e-15
gi|90991712 CD207 antigen, langerin [Homo sapiens]                     80   2e-15
gi|223029386 CD209 molecule isoform 3 [Homo sapiens]                   79   3e-15
gi|223029384 CD209 molecule isoform 7 [Homo sapiens]                   79   3e-15
gi|223029382 CD209 molecule isoform 6 [Homo sapiens]                   79   3e-15
gi|223029380 CD209 molecule isoform 5 [Homo sapiens]                   79   3e-15

>gi|7705338 C-type lectin domain family 4, member A isoform 1 [Homo
           sapiens]
          Length = 237

 Score =  499 bits (1284), Expect = e-141
 Identities = 237/237 (100%), Positives = 237/237 (100%)

Query: 1   MTSEITYAEVRFKNEFKSSGINTASSAASKERTAPHKSNTGFPKLLCASLLIFFLLLAIS 60
           MTSEITYAEVRFKNEFKSSGINTASSAASKERTAPHKSNTGFPKLLCASLLIFFLLLAIS
Sbjct: 1   MTSEITYAEVRFKNEFKSSGINTASSAASKERTAPHKSNTGFPKLLCASLLIFFLLLAIS 60

Query: 61  FFIAFVIFFQKYSQLLEKKTTKELVHTTLECVKKNMPVEETAWSCCPKNWKSFSSNCYFI 120
           FFIAFVIFFQKYSQLLEKKTTKELVHTTLECVKKNMPVEETAWSCCPKNWKSFSSNCYFI
Sbjct: 61  FFIAFVIFFQKYSQLLEKKTTKELVHTTLECVKKNMPVEETAWSCCPKNWKSFSSNCYFI 120

Query: 121 STESASWQDSEKDCARMEAHLLVINTQEEQDFIFQNLQEESAYFVGLSDPEGQRHWQWVD 180
           STESASWQDSEKDCARMEAHLLVINTQEEQDFIFQNLQEESAYFVGLSDPEGQRHWQWVD
Sbjct: 121 STESASWQDSEKDCARMEAHLLVINTQEEQDFIFQNLQEESAYFVGLSDPEGQRHWQWVD 180

Query: 181 QTPYNESSTFWHPREPSDPNERCVVLNFRKSPKRWGWNDVNCLGPQRSVCEMMKIHL 237
           QTPYNESSTFWHPREPSDPNERCVVLNFRKSPKRWGWNDVNCLGPQRSVCEMMKIHL
Sbjct: 181 QTPYNESSTFWHPREPSDPNERCVVLNFRKSPKRWGWNDVNCLGPQRSVCEMMKIHL 237


>gi|37577119 C-type lectin domain family 4, member A isoform 2 [Homo
           sapiens]
          Length = 204

 Score =  415 bits (1066), Expect = e-116
 Identities = 203/237 (85%), Positives = 204/237 (86%), Gaps = 33/237 (13%)

Query: 1   MTSEITYAEVRFKNEFKSSGINTASSAASKERTAPHKSNTGFPKLLCASLLIFFLLLAIS 60
           MTSEITYAEVRFKNEFKSSGINTASSAASKERTAPHKSNTGFPKLLCASLLIFFLLLAIS
Sbjct: 1   MTSEITYAEVRFKNEFKSSGINTASSAASKERTAPHKSNTGFPKLLCASLLIFFLLLAIS 60

Query: 61  FFIAFVIFFQKYSQLLEKKTTKELVHTTLECVKKNMPVEETAWSCCPKNWKSFSSNCYFI 120
           FFIAFV                                 +TAWSCCPKNWKSFSSNCYFI
Sbjct: 61  FFIAFV---------------------------------KTAWSCCPKNWKSFSSNCYFI 87

Query: 121 STESASWQDSEKDCARMEAHLLVINTQEEQDFIFQNLQEESAYFVGLSDPEGQRHWQWVD 180
           STESASWQDSEKDCARMEAHLLVINTQEEQDFIFQNLQEESAYFVGLSDPEGQRHWQWVD
Sbjct: 88  STESASWQDSEKDCARMEAHLLVINTQEEQDFIFQNLQEESAYFVGLSDPEGQRHWQWVD 147

Query: 181 QTPYNESSTFWHPREPSDPNERCVVLNFRKSPKRWGWNDVNCLGPQRSVCEMMKIHL 237
           QTPYNESSTFWHPREPSDPNERCVVLNFRKSPKRWGWNDVNCLGPQRSVCEMMKIHL
Sbjct: 148 QTPYNESSTFWHPREPSDPNERCVVLNFRKSPKRWGWNDVNCLGPQRSVCEMMKIHL 204


>gi|148536836 C-type lectin domain family 4, member A isoform 3
           [Homo sapiens]
          Length = 198

 Score =  404 bits (1039), Expect = e-113
 Identities = 197/237 (83%), Positives = 198/237 (83%), Gaps = 39/237 (16%)

Query: 1   MTSEITYAEVRFKNEFKSSGINTASSAASKERTAPHKSNTGFPKLLCASLLIFFLLLAIS 60
           MTSEITYAEVRFKNEFKSSGINTASSA                                 
Sbjct: 1   MTSEITYAEVRFKNEFKSSGINTASSA--------------------------------- 27

Query: 61  FFIAFVIFFQKYSQLLEKKTTKELVHTTLECVKKNMPVEETAWSCCPKNWKSFSSNCYFI 120
                 +FFQKYSQLLEKKTTKELVHTTLECVKKNMPVEETAWSCCPKNWKSFSSNCYFI
Sbjct: 28  ------VFFQKYSQLLEKKTTKELVHTTLECVKKNMPVEETAWSCCPKNWKSFSSNCYFI 81

Query: 121 STESASWQDSEKDCARMEAHLLVINTQEEQDFIFQNLQEESAYFVGLSDPEGQRHWQWVD 180
           STESASWQDSEKDCARMEAHLLVINTQEEQDFIFQNLQEESAYFVGLSDPEGQRHWQWVD
Sbjct: 82  STESASWQDSEKDCARMEAHLLVINTQEEQDFIFQNLQEESAYFVGLSDPEGQRHWQWVD 141

Query: 181 QTPYNESSTFWHPREPSDPNERCVVLNFRKSPKRWGWNDVNCLGPQRSVCEMMKIHL 237
           QTPYNESSTFWHPREPSDPNERCVVLNFRKSPKRWGWNDVNCLGPQRSVCEMMKIHL
Sbjct: 142 QTPYNESSTFWHPREPSDPNERCVVLNFRKSPKRWGWNDVNCLGPQRSVCEMMKIHL 198


>gi|37577117 C-type lectin domain family 4, member A isoform 4 [Homo
           sapiens]
          Length = 165

 Score =  308 bits (789), Expect = 3e-84
 Identities = 138/138 (100%), Positives = 138/138 (100%)

Query: 100 ETAWSCCPKNWKSFSSNCYFISTESASWQDSEKDCARMEAHLLVINTQEEQDFIFQNLQE 159
           ETAWSCCPKNWKSFSSNCYFISTESASWQDSEKDCARMEAHLLVINTQEEQDFIFQNLQE
Sbjct: 28  ETAWSCCPKNWKSFSSNCYFISTESASWQDSEKDCARMEAHLLVINTQEEQDFIFQNLQE 87

Query: 160 ESAYFVGLSDPEGQRHWQWVDQTPYNESSTFWHPREPSDPNERCVVLNFRKSPKRWGWND 219
           ESAYFVGLSDPEGQRHWQWVDQTPYNESSTFWHPREPSDPNERCVVLNFRKSPKRWGWND
Sbjct: 88  ESAYFVGLSDPEGQRHWQWVDQTPYNESSTFWHPREPSDPNERCVVLNFRKSPKRWGWND 147

Query: 220 VNCLGPQRSVCEMMKIHL 237
           VNCLGPQRSVCEMMKIHL
Sbjct: 148 VNCLGPQRSVCEMMKIHL 165


>gi|18466806 C-type lectin domain family 4, member C isoform 1 [Homo
           sapiens]
          Length = 213

 Score =  214 bits (545), Expect = 5e-56
 Identities = 97/191 (50%), Positives = 135/191 (70%), Gaps = 7/191 (3%)

Query: 51  LIFFLLLAISFFIAFVI----FFQKYSQLLEKKTTKELVHTTLECVKKNMPVEETAWSCC 106
           ++  LLL++ F ++ V+     + K  + L K    +  H +L CV +   +E+  WSCC
Sbjct: 26  VVSILLLSVCFTVSSVVPHNFMYSKTVKRLSKLREYQQYHPSLTCVMEGKDIED--WSCC 83

Query: 107 PKNWKSFSSNCYFISTESASWQDSEKDCARMEAHLLVINTQEEQDFIFQNLQEESAYFVG 166
           P  W SF S+CYFIST   SW  S+K+C+ M A L+VINT+EEQDFI QNL+  S+YF+G
Sbjct: 84  PTPWTSFQSSCYFISTGMQSWTKSQKNCSVMGADLVVINTREEQDFIIQNLKRNSSYFLG 143

Query: 167 LSDPEGQRHWQWVDQTPYNESSTFWHPREPSDPNERCVVLNFRKSPKRWGWNDVNCLGPQ 226
           LSDP G+RHWQWVDQTPYNE+ TFWH  EP++ +ERC ++NFR S + WGWND++C  PQ
Sbjct: 144 LSDPGGRRHWQWVDQTPYNENVTFWHSGEPNNLDERCAIINFRSS-EEWGWNDIHCHVPQ 202

Query: 227 RSVCEMMKIHL 237
           +S+C+M KI++
Sbjct: 203 KSICKMKKIYI 213


>gi|45580692 C-type lectin domain family 4, member C isoform 2 [Homo
           sapiens]
          Length = 182

 Score =  208 bits (530), Expect = 3e-54
 Identities = 92/169 (54%), Positives = 123/169 (72%), Gaps = 3/169 (1%)

Query: 69  FQKYSQLLEKKTTKELVHTTLECVKKNMPVEETAWSCCPKNWKSFSSNCYFISTESASWQ 128
           + K  + L K    +  H +L CV +   +E+  WSCCP  W SF S+CYFIST   SW 
Sbjct: 17  YSKTVKRLSKLREYQQYHPSLTCVMEGKDIED--WSCCPTPWTSFQSSCYFISTGMQSWT 74

Query: 129 DSEKDCARMEAHLLVINTQEEQDFIFQNLQEESAYFVGLSDPEGQRHWQWVDQTPYNESS 188
            S+K+C+ M A L+VINT+EEQDFI QNL+  S+YF+GLSDP G+RHWQWVDQTPYNE+ 
Sbjct: 75  KSQKNCSVMGADLVVINTREEQDFIIQNLKRNSSYFLGLSDPGGRRHWQWVDQTPYNENV 134

Query: 189 TFWHPREPSDPNERCVVLNFRKSPKRWGWNDVNCLGPQRSVCEMMKIHL 237
           TFWH  EP++ +ERC ++NFR S + WGWND++C  PQ+S+C+M KI++
Sbjct: 135 TFWHSGEPNNLDERCAIINFRSS-EEWGWNDIHCHVPQKSICKMKKIYI 182


>gi|55742774 dectin-2 [Homo sapiens]
          Length = 209

 Score =  179 bits (453), Expect = 2e-45
 Identities = 83/187 (44%), Positives = 117/187 (62%), Gaps = 4/187 (2%)

Query: 52  IFFLLLAISFFIAFVIFFQ-KYSQLLEKKTTKELVHTTLECVKKNMPVEETAWSCCPKNW 110
           I   LL+  F ++ V+ +   Y +  ++ +     H++L C  +   V   AW CCP +W
Sbjct: 26  ISIALLSACFIVSCVVTYHFTYGETGKRLSELHSYHSSLTCFSEGTKVP--AWGCCPASW 83

Query: 111 KSFSSNCYFISTESASWQDSEKDCARMEAHLLVINTQEEQDFIFQNLQEESAYFVGLSDP 170
           KSF S+CYFIS+E   W  SE++C  M AHL+V NT+ EQ+FI Q L E  +YF+GLSDP
Sbjct: 84  KSFGSSCYFISSEEKVWSKSEQNCVEMGAHLVVFNTEAEQNFIVQQLNESFSYFLGLSDP 143

Query: 171 EGQRHWQWVDQTPYNESSTFWHPREPSDPNERCVVLNFRKSPKRWGWNDVNCLGPQRSVC 230
           +G  +WQW+D+TPY ++  FWH  EP+   E+C  + F K P  WGWNDV C   + S+C
Sbjct: 144 QGNNNWQWIDKTPYEKNVRFWHLGEPNHSAEQCASIVFWK-PTGWGWNDVICETRRNSIC 202

Query: 231 EMMKIHL 237
           EM KI+L
Sbjct: 203 EMNKIYL 209


>gi|31542313 C-type lectin domain family 4, member D [Homo sapiens]
          Length = 215

 Score =  155 bits (391), Expect = 4e-38
 Identities = 70/187 (37%), Positives = 112/187 (59%), Gaps = 7/187 (3%)

Query: 51  LIFFLLLAISFFIAFVIFFQKYSQLLEKKTTKELVH-TTLECVKKNMPV---EETAWSCC 106
           ++F LLL++ F  + ++    +S+        +L H   L+C+K+   +   E + W+CC
Sbjct: 25  VVFILLLSVCFIASCLVTHHNFSRCKRGTGVHKLEHHAKLKCIKEKSELKSAEGSTWNCC 84

Query: 107 PKNWKSFSSNCYFISTESASWQDSEKDCARMEAHLLVINTQEEQDFIFQNLQEESAYFVG 166
           P +W++F SNCYF  T++ +W +SE++C+ M AHL+ I+T+ EQ+FI Q L    +YF+G
Sbjct: 85  PIDWRAFQSNCYFPLTDNKTWAESERNCSGMGAHLMTISTEAEQNFIIQFLDRRLSYFLG 144

Query: 167 LSDPEGQRHWQWVDQTPYNESSTFWHPREP-SDPNERCVVLNFRKSPKRWGWNDVNCLGP 225
           L D   +  W+WVDQTP+N    FWH  EP +   E CVVL + +   +W WNDV C   
Sbjct: 145 LRDENAKGQWRWVDQTPFNPRRVFWHKNEPDNSQGENCVVLVYNQD--KWAWNDVPCNFE 202

Query: 226 QRSVCEM 232
              +C++
Sbjct: 203 ASRICKI 209


>gi|7657333 C-type lectin domain family 4, member E [Homo sapiens]
          Length = 219

 Score =  129 bits (324), Expect = 2e-30
 Identities = 70/184 (38%), Positives = 99/184 (53%), Gaps = 6/184 (3%)

Query: 55  LLLAISFFIAFVIFFQKYSQLLEKKTTKELVHTTLECVKKNMPVEETAWSCCPKNWKSFS 114
           L L+  F    V+ F+ +    EKK       T L C         +  +CCP NW+ F 
Sbjct: 32  LFLSACFITRCVVTFRIFQTCDEKKFQLPENFTELSCYNYG---SGSVKNCCPLNWEYFQ 88

Query: 115 SNCYFISTESASWQDSEKDCARMEAHLLVINTQEEQDFIFQNLQEESAYFVGLSDPEGQR 174
           S+CYF ST++ SW  S K+C+ M AHL+VIN+QEEQ+F+     +   +F+GLSD   + 
Sbjct: 89  SSCYFFSTDTISWALSLKNCSAMGAHLVVINSQEEQEFLSYKKPKMREFFIGLSDQVVEG 148

Query: 175 HWQWVDQTPYNESSTFWHPREPSD--PNERCVVLNFRKSPKRWGWNDVNCLGPQRSVCEM 232
            WQWVD TP  +S +FW   EP++    E C  +    +P R  WNDV C      +CEM
Sbjct: 149 QWQWVDGTPLTKSLSFWDVGEPNNIATLEDCATMRDSSNP-RQNWNDVTCFLNYFRICEM 207

Query: 233 MKIH 236
           + I+
Sbjct: 208 VGIN 211


>gi|53832016 C-type lectin, superfamily member 14 isoform 2 [Homo
           sapiens]
          Length = 292

 Score = 96.7 bits (239), Expect = 2e-20
 Identities = 61/164 (37%), Positives = 83/164 (50%), Gaps = 19/164 (11%)

Query: 78  KKTTKELVHTTLECVKKNMPVEE--TAWSCCPKNWKSFSSNCYFISTESASWQDSEKDCA 135
           ++  ++L   T +    N   EE  T  +CCP NW     +CY+ S    SW ++EK C 
Sbjct: 127 QQLVQDLKKLTCQVATLNNNGEEASTEGTCCPVNWVEHQDSCYWFSHSGMSWAEAEKYCQ 186

Query: 136 RMEAHLLVINTQEEQDFIFQNLQEESAY-FVGLSDPEGQRHWQWVDQTPYNESSTFWHPR 194
              AHL+VIN++EEQ+F+ + L   SAY ++GLSDPEG   W+WVD T Y      W P 
Sbjct: 187 LKNAHLVVINSREEQNFVQKYL--GSAYTWMGLSDPEGA--WKWVDGTDYATGFQNWKPG 242

Query: 195 EPSD-------PNERCVVLNFRKSPKRWGWNDVNCLGPQRSVCE 231
           +P D         E C   +F    +   WND  C  P   VCE
Sbjct: 243 QPDDWQGHGLGGGEDCA--HFHPDGR---WNDDVCQRPYHWVCE 281


>gi|33667103 C-type lectin, superfamily member 14 isoform 1 [Homo
           sapiens]
          Length = 316

 Score = 95.9 bits (237), Expect = 3e-20
 Identities = 56/139 (40%), Positives = 73/139 (52%), Gaps = 17/139 (12%)

Query: 101 TAWSCCPKNWKSFSSNCYFISTESASWQDSEKDCARMEAHLLVINTQEEQDFIFQNLQEE 160
           T  +CCP NW     +CY+ S    SW ++EK C    AHL+VIN++EEQ+F+ + L   
Sbjct: 176 TEGTCCPVNWVEHQDSCYWFSHSGMSWAEAEKYCQLKNAHLVVINSREEQNFVQKYL--G 233

Query: 161 SAY-FVGLSDPEGQRHWQWVDQTPYNESSTFWHPREPSD-------PNERCVVLNFRKSP 212
           SAY ++GLSDPEG   W+WVD T Y      W P +P D         E C   +F    
Sbjct: 234 SAYTWMGLSDPEGA--WKWVDGTDYATGFQNWKPGQPDDWQGHGLGGGEDCA--HFHPDG 289

Query: 213 KRWGWNDVNCLGPQRSVCE 231
           +   WND  C  P   VCE
Sbjct: 290 R---WNDDVCQRPYHWVCE 305


>gi|223278347 C-type lectin domain family 4, member M isoform 9
           [Homo sapiens]
          Length = 353

 Score = 89.0 bits (219), Expect = 3e-18
 Identities = 48/120 (40%), Positives = 65/120 (54%), Gaps = 9/120 (7%)

Query: 106 CPKNWKSFSSNCYFISTESASWQDSEKDCARMEAHLLVINTQEEQDFI-FQNLQEESAYF 164
           CPK+W  F  NCYF+S    +W DS   C  + A L+VI T EEQ+F+  Q  +     +
Sbjct: 222 CPKDWTFFQGNCYFMSNSQRNWHDSVTACQEVRAQLVVIKTAEEQNFLQLQTSRSNRFSW 281

Query: 165 VGLSDPEGQRHWQWVDQTPYNES-STFWHPREPSDP-NERCVVLNFRKSPKRWGWNDVNC 222
           +GLSD   +  WQWVD +P + S   +W+  EP++  NE C    F  S    GWND  C
Sbjct: 282 MGLSDLNQEGTWQWVDGSPLSPSFQRYWNSGEPNNSGNEDCA--EFSGS----GWNDNRC 335


>gi|223278339 C-type lectin domain family 4, member M isoform 7
           [Homo sapiens]
          Length = 263

 Score = 89.0 bits (219), Expect = 3e-18
 Identities = 48/120 (40%), Positives = 65/120 (54%), Gaps = 9/120 (7%)

Query: 106 CPKNWKSFSSNCYFISTESASWQDSEKDCARMEAHLLVINTQEEQDFI-FQNLQEESAYF 164
           CPK+W  F  NCYF+S    +W DS   C  + A L+VI T EEQ+F+  Q  +     +
Sbjct: 132 CPKDWTFFQGNCYFMSNSQRNWHDSVTACQEVRAQLVVIKTAEEQNFLQLQTSRSNRFSW 191

Query: 165 VGLSDPEGQRHWQWVDQTPYNES-STFWHPREPSDP-NERCVVLNFRKSPKRWGWNDVNC 222
           +GLSD   +  WQWVD +P + S   +W+  EP++  NE C    F  S    GWND  C
Sbjct: 192 MGLSDLNQEGTWQWVDGSPLSPSFQRYWNSGEPNNSGNEDCA--EFSGS----GWNDNRC 245


>gi|223278337 C-type lectin domain family 4, member M isoform 12
           [Homo sapiens]
          Length = 375

 Score = 89.0 bits (219), Expect = 3e-18
 Identities = 48/120 (40%), Positives = 65/120 (54%), Gaps = 9/120 (7%)

Query: 106 CPKNWKSFSSNCYFISTESASWQDSEKDCARMEAHLLVINTQEEQDFI-FQNLQEESAYF 164
           CPK+W  F  NCYF+S    +W DS   C  + A L+VI T EEQ+F+  Q  +     +
Sbjct: 244 CPKDWTFFQGNCYFMSNSQRNWHDSVTACQEVRAQLVVIKTAEEQNFLQLQTSRSNRFSW 303

Query: 165 VGLSDPEGQRHWQWVDQTPYNES-STFWHPREPSDP-NERCVVLNFRKSPKRWGWNDVNC 222
           +GLSD   +  WQWVD +P + S   +W+  EP++  NE C    F  S    GWND  C
Sbjct: 304 MGLSDLNQEGTWQWVDGSPLSPSFQRYWNSGEPNNSGNEDCA--EFSGS----GWNDNRC 357


>gi|223278335 C-type lectin domain family 4, member M isoform 2
           [Homo sapiens]
          Length = 348

 Score = 89.0 bits (219), Expect = 3e-18
 Identities = 48/120 (40%), Positives = 65/120 (54%), Gaps = 9/120 (7%)

Query: 106 CPKNWKSFSSNCYFISTESASWQDSEKDCARMEAHLLVINTQEEQDFI-FQNLQEESAYF 164
           CPK+W  F  NCYF+S    +W DS   C  + A L+VI T EEQ+F+  Q  +     +
Sbjct: 217 CPKDWTFFQGNCYFMSNSQRNWHDSVTACQEVRAQLVVIKTAEEQNFLQLQTSRSNRFSW 276

Query: 165 VGLSDPEGQRHWQWVDQTPYNES-STFWHPREPSDP-NERCVVLNFRKSPKRWGWNDVNC 222
           +GLSD   +  WQWVD +P + S   +W+  EP++  NE C    F  S    GWND  C
Sbjct: 277 MGLSDLNQEGTWQWVDGSPLSPSFQRYWNSGEPNNSGNEDCA--EFSGS----GWNDNRC 330


>gi|223278350 C-type lectin domain family 4, member M isoform 8
           [Homo sapiens]
          Length = 376

 Score = 89.0 bits (219), Expect = 3e-18
 Identities = 48/120 (40%), Positives = 65/120 (54%), Gaps = 9/120 (7%)

Query: 106 CPKNWKSFSSNCYFISTESASWQDSEKDCARMEAHLLVINTQEEQDFI-FQNLQEESAYF 164
           CPK+W  F  NCYF+S    +W DS   C  + A L+VI T EEQ+F+  Q  +     +
Sbjct: 245 CPKDWTFFQGNCYFMSNSQRNWHDSVTACQEVRAQLVVIKTAEEQNFLQLQTSRSNRFSW 304

Query: 165 VGLSDPEGQRHWQWVDQTPYNES-STFWHPREPSDP-NERCVVLNFRKSPKRWGWNDVNC 222
           +GLSD   +  WQWVD +P + S   +W+  EP++  NE C    F  S    GWND  C
Sbjct: 305 MGLSDLNQEGTWQWVDGSPLSPSFQRYWNSGEPNNSGNEDCA--EFSGS----GWNDNRC 358


>gi|223278342 C-type lectin domain family 4, member M isoform 11
           [Homo sapiens]
          Length = 332

 Score = 89.0 bits (219), Expect = 3e-18
 Identities = 48/120 (40%), Positives = 65/120 (54%), Gaps = 9/120 (7%)

Query: 106 CPKNWKSFSSNCYFISTESASWQDSEKDCARMEAHLLVINTQEEQDFI-FQNLQEESAYF 164
           CPK+W  F  NCYF+S    +W DS   C  + A L+VI T EEQ+F+  Q  +     +
Sbjct: 201 CPKDWTFFQGNCYFMSNSQRNWHDSVTACQEVRAQLVVIKTAEEQNFLQLQTSRSNRFSW 260

Query: 165 VGLSDPEGQRHWQWVDQTPYNES-STFWHPREPSDP-NERCVVLNFRKSPKRWGWNDVNC 222
           +GLSD   +  WQWVD +P + S   +W+  EP++  NE C    F  S    GWND  C
Sbjct: 261 MGLSDLNQEGTWQWVDGSPLSPSFQRYWNSGEPNNSGNEDCA--EFSGS----GWNDNRC 314


>gi|42542390 C-type lectin domain family 4, member M isoform 1 [Homo
           sapiens]
          Length = 399

 Score = 89.0 bits (219), Expect = 3e-18
 Identities = 48/120 (40%), Positives = 65/120 (54%), Gaps = 9/120 (7%)

Query: 106 CPKNWKSFSSNCYFISTESASWQDSEKDCARMEAHLLVINTQEEQDFI-FQNLQEESAYF 164
           CPK+W  F  NCYF+S    +W DS   C  + A L+VI T EEQ+F+  Q  +     +
Sbjct: 268 CPKDWTFFQGNCYFMSNSQRNWHDSVTACQEVRAQLVVIKTAEEQNFLQLQTSRSNRFSW 327

Query: 165 VGLSDPEGQRHWQWVDQTPYNES-STFWHPREPSDP-NERCVVLNFRKSPKRWGWNDVNC 222
           +GLSD   +  WQWVD +P + S   +W+  EP++  NE C    F  S    GWND  C
Sbjct: 328 MGLSDLNQEGTWQWVDGSPLSPSFQRYWNSGEPNNSGNEDCA--EFSGS----GWNDNRC 381


>gi|18426877 asialoglycoprotein receptor 2 isoform c [Homo sapiens]
          Length = 292

 Score = 86.3 bits (212), Expect = 2e-17
 Identities = 48/135 (35%), Positives = 68/135 (50%), Gaps = 15/135 (11%)

Query: 104 SCCPKNWKSFSSNCYFISTESASWQDSEKDCARMEAHLLVINTQEEQDFIFQNLQEESAY 163
           +CCP NW     +CY+ S    +W ++EK C    AHL+VIN+ EEQ FI Q+    + +
Sbjct: 156 TCCPVNWVEHQGSCYWFSHSGKAWAEAEKYCQLENAHLVVINSWEEQKFIVQHTNPFNTW 215

Query: 164 FVGLSDPEGQRHWQWVDQTPYNESSTFWHPREPSD-------PNERCVVLNFRKSPKRWG 216
            +GL+D +G   W+WVD T Y  +   W   +P +        +E CV +          
Sbjct: 216 -IGLTDSDGS--WKWVDGTDYRHNYKNWAVTQPDNWHGHELGGSEDCVEVQ-----PDGR 267

Query: 217 WNDVNCLGPQRSVCE 231
           WND  CL   R VCE
Sbjct: 268 WNDDFCLQVYRWVCE 282


>gi|18426875 asialoglycoprotein receptor 2 isoform b [Homo sapiens]
          Length = 287

 Score = 86.3 bits (212), Expect = 2e-17
 Identities = 48/135 (35%), Positives = 68/135 (50%), Gaps = 15/135 (11%)

Query: 104 SCCPKNWKSFSSNCYFISTESASWQDSEKDCARMEAHLLVINTQEEQDFIFQNLQEESAY 163
           +CCP NW     +CY+ S    +W ++EK C    AHL+VIN+ EEQ FI Q+    + +
Sbjct: 151 TCCPVNWVEHQGSCYWFSHSGKAWAEAEKYCQLENAHLVVINSWEEQKFIVQHTNPFNTW 210

Query: 164 FVGLSDPEGQRHWQWVDQTPYNESSTFWHPREPSD-------PNERCVVLNFRKSPKRWG 216
            +GL+D +G   W+WVD T Y  +   W   +P +        +E CV +          
Sbjct: 211 -IGLTDSDGS--WKWVDGTDYRHNYKNWAVTQPDNWHGHELGGSEDCVEVQ-----PDGR 262

Query: 217 WNDVNCLGPQRSVCE 231
           WND  CL   R VCE
Sbjct: 263 WNDDFCLQVYRWVCE 277


>gi|18426873 asialoglycoprotein receptor 2 isoform a [Homo sapiens]
          Length = 311

 Score = 86.3 bits (212), Expect = 2e-17
 Identities = 48/135 (35%), Positives = 68/135 (50%), Gaps = 15/135 (11%)

Query: 104 SCCPKNWKSFSSNCYFISTESASWQDSEKDCARMEAHLLVINTQEEQDFIFQNLQEESAY 163
           +CCP NW     +CY+ S    +W ++EK C    AHL+VIN+ EEQ FI Q+    + +
Sbjct: 175 TCCPVNWVEHQGSCYWFSHSGKAWAEAEKYCQLENAHLVVINSWEEQKFIVQHTNPFNTW 234

Query: 164 FVGLSDPEGQRHWQWVDQTPYNESSTFWHPREPSD-------PNERCVVLNFRKSPKRWG 216
            +GL+D +G   W+WVD T Y  +   W   +P +        +E CV +          
Sbjct: 235 -IGLTDSDGS--WKWVDGTDYRHNYKNWAVTQPDNWHGHELGGSEDCVEVQ-----PDGR 286

Query: 217 WNDVNCLGPQRSVCE 231
           WND  CL   R VCE
Sbjct: 287 WNDDFCLQVYRWVCE 301


>gi|4502253 asialoglycoprotein receptor 2 isoform a [Homo sapiens]
          Length = 311

 Score = 86.3 bits (212), Expect = 2e-17
 Identities = 48/135 (35%), Positives = 68/135 (50%), Gaps = 15/135 (11%)

Query: 104 SCCPKNWKSFSSNCYFISTESASWQDSEKDCARMEAHLLVINTQEEQDFIFQNLQEESAY 163
           +CCP NW     +CY+ S    +W ++EK C    AHL+VIN+ EEQ FI Q+    + +
Sbjct: 175 TCCPVNWVEHQGSCYWFSHSGKAWAEAEKYCQLENAHLVVINSWEEQKFIVQHTNPFNTW 234

Query: 164 FVGLSDPEGQRHWQWVDQTPYNESSTFWHPREPSD-------PNERCVVLNFRKSPKRWG 216
            +GL+D +G   W+WVD T Y  +   W   +P +        +E CV +          
Sbjct: 235 -IGLTDSDGS--WKWVDGTDYRHNYKNWAVTQPDNWHGHELGGSEDCVEVQ-----PDGR 286

Query: 217 WNDVNCLGPQRSVCE 231
           WND  CL   R VCE
Sbjct: 287 WNDDFCLQVYRWVCE 301


>gi|18641360 collectin sub-family member 12 [Homo sapiens]
          Length = 742

 Score = 84.7 bits (208), Expect = 6e-17
 Identities = 42/144 (29%), Positives = 72/144 (50%), Gaps = 13/144 (9%)

Query: 94  KNMPVEETAWSCCPKNWKSFSSNCYFISTESASWQDSEKDCARMEAHLLVINTQEEQDFI 153
           +N P      + CP +WK+F+  CY+ S E   ++D++  C    +HL+ INT+EEQ +I
Sbjct: 595 QNEPTPAPEDNGCPPHWKNFTDKCYYFSVEKEIFEDAKLFCEDKSSHLVFINTREEQQWI 654

Query: 154 FQNLQEESAYFVGLSDPEGQRHWQWVDQTPYNESSTFWHPREPSD------PNERCVVLN 207
            + +    ++++GL+D E +  W+W+D T  +  +  W   +P +      P E C  L 
Sbjct: 655 KKQMVGRESHWIGLTDSERENEWKWLDGTSPDYKN--WKAGQPDNWGHGHGPGEDCAGLI 712

Query: 208 FRKSPKRWGWNDVNCLGPQRSVCE 231
           +        WND  C      +CE
Sbjct: 713 YAGQ-----WNDFQCEDVNNFICE 731


>gi|4502251 asialoglycoprotein receptor 1 [Homo sapiens]
          Length = 291

 Score = 84.0 bits (206), Expect = 1e-16
 Identities = 47/151 (31%), Positives = 70/151 (46%), Gaps = 15/151 (9%)

Query: 88  TLECVKKNMPVEETAWSCCPKNWKSFSSNCYFISTESASWQDSEKDCARMEAHLLVINTQ 147
           +L C    +    +  +CCP NW     +CY+ S    +W D++  C   +AHL+V+ + 
Sbjct: 136 SLSCQMAALQGNGSERTCCPVNWVEHERSCYWFSRSGKAWADADNYCRLEDAHLVVVTSW 195

Query: 148 EEQDFIFQNLQEESAYFVGLSDPEGQRHWQWVDQTPYNESSTFWHPREPSD-------PN 200
           EEQ F+  ++   + + +GL D  G   W+WVD T Y      W P +P D         
Sbjct: 196 EEQKFVQHHIGPVNTW-MGLHDQNGP--WKWVDGTDYETGFKNWRPEQPDDWYGHGLGGG 252

Query: 201 ERCVVLNFRKSPKRWGWNDVNCLGPQRSVCE 231
           E C   +F    +   WND  C  P R VCE
Sbjct: 253 EDCA--HFTDDGR---WNDDVCQRPYRWVCE 278


>gi|223029517 CD209 molecule isoform 8 [Homo sapiens]
          Length = 243

 Score = 80.1 bits (196), Expect = 2e-15
 Identities = 50/171 (29%), Positives = 83/171 (48%), Gaps = 13/171 (7%)

Query: 56  LLAISFFIAFVIFFQKY-SQLLEKKTTKELVHTTLECVKKNMPVEETAWSCCPKNWKSFS 114
           LL+ +     ++   K  S + ++++ ++ ++  L  +K  +   E     CP  W  F 
Sbjct: 47  LLSFTLLAGLLVQVSKVPSSISQEQSRQDAIYQNLTQLKAAV---ERLCHPCPWEWTFFQ 103

Query: 115 SNCYFISTESASWQDSEKDCARMEAHLLVINTQEEQDFI-FQNLQEESAYFVGLSDPEGQ 173
            NCYF+S    +W DS   C  + A L+VI + EEQ+F+  Q+ +     ++GLSD   +
Sbjct: 104 GNCYFMSNSQRNWHDSITACKEVGAQLVVIKSAEEQNFLQLQSSRSNRFTWMGLSDLNQE 163

Query: 174 RHWQWVDQTPYNES-STFWHPREPSDPNER-CVVLNFRKSPKRWGWNDVNC 222
             WQWVD +P   S   +W+  EP++  E  C   +        GWND  C
Sbjct: 164 GTWQWVDGSPLLPSFKQYWNRGEPNNVGEEDCAEFSGN------GWNDDKC 208


>gi|90991712 CD207 antigen, langerin [Homo sapiens]
          Length = 328

 Score = 79.7 bits (195), Expect = 2e-15
 Identities = 42/139 (30%), Positives = 69/139 (49%), Gaps = 8/139 (5%)

Query: 88  TLECVKKNMPVEETAWSCCPKNWKSFSSNCYFISTESASWQDSEKDCARMEAHLLVINTQ 147
           +LE + K +  +        + WK F  N Y+ S    +W  +E+ C    +HL  + ++
Sbjct: 177 SLENMSKLLKRQNDILQVVSQGWKYFKGNFYYFSLIPKTWYSAEQFCVSRNSHLTSVTSE 236

Query: 148 EEQDFIFQNLQEESAYFVGLSDPEGQRHWQWVDQTPYN--ESSTFWHPREPSDP--NERC 203
            EQ+F+++       Y++GL+    +  W WVD TP+N  +S  FW P EP++   NE C
Sbjct: 237 SEQEFLYKT-AGGLIYWIGLTKAGMEGDWSWVDDTPFNKVQSVRFWIPGEPNNAGNNEHC 295

Query: 204 VVLNFRKSPKRWGWNDVNC 222
             +   K+P    WND  C
Sbjct: 296 GNI---KAPSLQAWNDAPC 311


>gi|223029386 CD209 molecule isoform 3 [Homo sapiens]
          Length = 380

 Score = 79.3 bits (194), Expect = 3e-15
 Identities = 43/120 (35%), Positives = 61/120 (50%), Gaps = 9/120 (7%)

Query: 106 CPKNWKSFSSNCYFISTESASWQDSEKDCARMEAHLLVINTQEEQDFI-FQNLQEESAYF 164
           CP  W  F  NCYF+S    +W DS   C  + A L+VI + EEQ+F+  Q+ +     +
Sbjct: 232 CPWEWTFFQGNCYFMSNSQRNWHDSITACKEVGAQLVVIKSAEEQNFLQLQSSRSNRFTW 291

Query: 165 VGLSDPEGQRHWQWVDQTPYNES-STFWHPREPSDPNER-CVVLNFRKSPKRWGWNDVNC 222
           +GLSD   +  WQWVD +P   S   +W+  EP++  E  C   +        GWND  C
Sbjct: 292 MGLSDLNQEGTWQWVDGSPLLPSFKQYWNRGEPNNVGEEDCAEFSGN------GWNDDKC 345


>gi|223029384 CD209 molecule isoform 7 [Homo sapiens]
          Length = 312

 Score = 79.3 bits (194), Expect = 3e-15
 Identities = 43/120 (35%), Positives = 61/120 (50%), Gaps = 9/120 (7%)

Query: 106 CPKNWKSFSSNCYFISTESASWQDSEKDCARMEAHLLVINTQEEQDFI-FQNLQEESAYF 164
           CP  W  F  NCYF+S    +W DS   C  + A L+VI + EEQ+F+  Q+ +     +
Sbjct: 164 CPWEWTFFQGNCYFMSNSQRNWHDSITACKEVGAQLVVIKSAEEQNFLQLQSSRSNRFTW 223

Query: 165 VGLSDPEGQRHWQWVDQTPYNES-STFWHPREPSDPNER-CVVLNFRKSPKRWGWNDVNC 222
           +GLSD   +  WQWVD +P   S   +W+  EP++  E  C   +        GWND  C
Sbjct: 224 MGLSDLNQEGTWQWVDGSPLLPSFKQYWNRGEPNNVGEEDCAEFSGN------GWNDDKC 277


>gi|223029382 CD209 molecule isoform 6 [Homo sapiens]
          Length = 360

 Score = 79.3 bits (194), Expect = 3e-15
 Identities = 43/120 (35%), Positives = 61/120 (50%), Gaps = 9/120 (7%)

Query: 106 CPKNWKSFSSNCYFISTESASWQDSEKDCARMEAHLLVINTQEEQDFI-FQNLQEESAYF 164
           CP  W  F  NCYF+S    +W DS   C  + A L+VI + EEQ+F+  Q+ +     +
Sbjct: 212 CPWEWTFFQGNCYFMSNSQRNWHDSITACKEVGAQLVVIKSAEEQNFLQLQSSRSNRFTW 271

Query: 165 VGLSDPEGQRHWQWVDQTPYNES-STFWHPREPSDPNER-CVVLNFRKSPKRWGWNDVNC 222
           +GLSD   +  WQWVD +P   S   +W+  EP++  E  C   +        GWND  C
Sbjct: 272 MGLSDLNQEGTWQWVDGSPLLPSFKQYWNRGEPNNVGEEDCAEFSGN------GWNDDKC 325


>gi|223029380 CD209 molecule isoform 5 [Homo sapiens]
          Length = 268

 Score = 79.3 bits (194), Expect = 3e-15
 Identities = 43/120 (35%), Positives = 61/120 (50%), Gaps = 9/120 (7%)

Query: 106 CPKNWKSFSSNCYFISTESASWQDSEKDCARMEAHLLVINTQEEQDFI-FQNLQEESAYF 164
           CP  W  F  NCYF+S    +W DS   C  + A L+VI + EEQ+F+  Q+ +     +
Sbjct: 120 CPWEWTFFQGNCYFMSNSQRNWHDSITACKEVGAQLVVIKSAEEQNFLQLQSSRSNRFTW 179

Query: 165 VGLSDPEGQRHWQWVDQTPYNES-STFWHPREPSDPNER-CVVLNFRKSPKRWGWNDVNC 222
           +GLSD   +  WQWVD +P   S   +W+  EP++  E  C   +        GWND  C
Sbjct: 180 MGLSDLNQEGTWQWVDGSPLLPSFKQYWNRGEPNNVGEEDCAEFSGN------GWNDDKC 233


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.130    0.416 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,430,865
Number of Sequences: 37866
Number of extensions: 417688
Number of successful extensions: 1424
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 120
Number of HSP's successfully gapped in prelim test: 41
Number of HSP's that attempted gapping in prelim test: 1145
Number of HSP's gapped (non-prelim): 215
length of query: 237
length of database: 18,247,518
effective HSP length: 99
effective length of query: 138
effective length of database: 14,498,784
effective search space: 2000832192
effective search space used: 2000832192
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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