Guide to the Human Genome
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Search of human proteins with 7662276

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|7662276 hypothetical protein LOC9747 [Homo sapiens]
         (921 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|7662276 hypothetical protein LOC9747 [Homo sapiens]               1891   0.0  
gi|194097428 hypothetical protein LOC285966 A [Homo sapiens]         1103   0.0  
gi|194097425 hypothetical protein LOC285966 A [Homo sapiens]         1103   0.0  
gi|194097432 hypothetical protein LOC285966 B [Homo sapiens]          741   0.0  
gi|239754750 PREDICTED: similar to FAM115A protein [Homo sapiens]     420   e-117
gi|209977080 REST corepressor 3 isoform a [Homo sapiens]               31   6.1  
gi|8922733 REST corepressor 3 isoform d [Homo sapiens]                 31   6.1  
gi|5902072 serine (or cysteine) proteinase inhibitor, clade B (o...    30   7.9  
gi|4826645 aquaporin 3 [Homo sapiens]                                  30   7.9  
gi|56676335 RAP1 interacting factor 1 [Homo sapiens]                   30   7.9  

>gi|7662276 hypothetical protein LOC9747 [Homo sapiens]
          Length = 921

 Score = 1891 bits (4898), Expect = 0.0
 Identities = 921/921 (100%), Positives = 921/921 (100%)

Query: 1   MATPSAAFEALMNGVTSWDVPEDAVPCELLLIGEASFPVMVNDMGQVLIAASSYGRGRLV 60
           MATPSAAFEALMNGVTSWDVPEDAVPCELLLIGEASFPVMVNDMGQVLIAASSYGRGRLV
Sbjct: 1   MATPSAAFEALMNGVTSWDVPEDAVPCELLLIGEASFPVMVNDMGQVLIAASSYGRGRLV 60

Query: 61  VVSHEDYLVEAQLTPFLLNAVGWLCSSPGAPIGVHPSLAPLAKILEGSGVDAKVEPEVKD 120
           VVSHEDYLVEAQLTPFLLNAVGWLCSSPGAPIGVHPSLAPLAKILEGSGVDAKVEPEVKD
Sbjct: 61  VVSHEDYLVEAQLTPFLLNAVGWLCSSPGAPIGVHPSLAPLAKILEGSGVDAKVEPEVKD 120

Query: 121 SLGVYCIDAYNETMTEKLVKFMKCGGGLLIGGQAWDWANQGEDERVLFTFPGNLVTSVAG 180
           SLGVYCIDAYNETMTEKLVKFMKCGGGLLIGGQAWDWANQGEDERVLFTFPGNLVTSVAG
Sbjct: 121 SLGVYCIDAYNETMTEKLVKFMKCGGGLLIGGQAWDWANQGEDERVLFTFPGNLVTSVAG 180

Query: 181 IYFTDNKGDTSFFKVSKKMPKIPVLVSCEDDLSDDREELLHGISELDISNSDCFPSQLLV 240
           IYFTDNKGDTSFFKVSKKMPKIPVLVSCEDDLSDDREELLHGISELDISNSDCFPSQLLV
Sbjct: 181 IYFTDNKGDTSFFKVSKKMPKIPVLVSCEDDLSDDREELLHGISELDISNSDCFPSQLLV 240

Query: 241 HGALAFPLGLDSYHGCVIAAARYGRGRVVVTGHKVLFTVGKLGPFLLNAVRWLDGGRRGK 300
           HGALAFPLGLDSYHGCVIAAARYGRGRVVVTGHKVLFTVGKLGPFLLNAVRWLDGGRRGK
Sbjct: 241 HGALAFPLGLDSYHGCVIAAARYGRGRVVVTGHKVLFTVGKLGPFLLNAVRWLDGGRRGK 300

Query: 301 IVVQTELRTLSGLLAVGGIDTSIEPNLTSDASVYCFEPVSEVGVKELQEFVAEGGGLFVG 360
           IVVQTELRTLSGLLAVGGIDTSIEPNLTSDASVYCFEPVSEVGVKELQEFVAEGGGLFVG
Sbjct: 301 IVVQTELRTLSGLLAVGGIDTSIEPNLTSDASVYCFEPVSEVGVKELQEFVAEGGGLFVG 360

Query: 361 AQAWWWAFKNPGVSPLARFPGNLLLNPFGISITSQSLNPGPFRTPKAGIRTYHFRSTLAE 420
           AQAWWWAFKNPGVSPLARFPGNLLLNPFGISITSQSLNPGPFRTPKAGIRTYHFRSTLAE
Sbjct: 361 AQAWWWAFKNPGVSPLARFPGNLLLNPFGISITSQSLNPGPFRTPKAGIRTYHFRSTLAE 420

Query: 421 FQVIMGRKRGNVEKGWLAKLGPDGAAFLQIPAEEIPAYMSVHRLLRKLLSRYRLPVATRE 480
           FQVIMGRKRGNVEKGWLAKLGPDGAAFLQIPAEEIPAYMSVHRLLRKLLSRYRLPVATRE
Sbjct: 421 FQVIMGRKRGNVEKGWLAKLGPDGAAFLQIPAEEIPAYMSVHRLLRKLLSRYRLPVATRE 480

Query: 481 NPVINDCCRGAMLSLATGLAHSGSDLSLLVPEIEDMYSSPYLRPSESPITVEVNCTNPGT 540
           NPVINDCCRGAMLSLATGLAHSGSDLSLLVPEIEDMYSSPYLRPSESPITVEVNCTNPGT
Sbjct: 481 NPVINDCCRGAMLSLATGLAHSGSDLSLLVPEIEDMYSSPYLRPSESPITVEVNCTNPGT 540

Query: 541 RYCWMSTGLYIPGRQIIEVSLPEAAASADLKIQIGCHTDDLTRASKLFRGPLVINRCCLD 600
           RYCWMSTGLYIPGRQIIEVSLPEAAASADLKIQIGCHTDDLTRASKLFRGPLVINRCCLD
Sbjct: 541 RYCWMSTGLYIPGRQIIEVSLPEAAASADLKIQIGCHTDDLTRASKLFRGPLVINRCCLD 600

Query: 601 KPTKSITCLWGGLLYIIVPQNSKLGSVPVTVKGAVHAPYYKLGETTLEEWKRRIQENPGP 660
           KPTKSITCLWGGLLYIIVPQNSKLGSVPVTVKGAVHAPYYKLGETTLEEWKRRIQENPGP
Sbjct: 601 KPTKSITCLWGGLLYIIVPQNSKLGSVPVTVKGAVHAPYYKLGETTLEEWKRRIQENPGP 660

Query: 661 WGELATDNIILTVPTANLRTLENPEPLLRLWDEVMQAVARLGAEPFPLRLPQRIVADVQI 720
           WGELATDNIILTVPTANLRTLENPEPLLRLWDEVMQAVARLGAEPFPLRLPQRIVADVQI
Sbjct: 661 WGELATDNIILTVPTANLRTLENPEPLLRLWDEVMQAVARLGAEPFPLRLPQRIVADVQI 720

Query: 721 SVGWMHAGYPIMCHLESVQELINEKLIRTKGLWGPVHELGRNQQRQEWEFPPHTTEATCN 780
           SVGWMHAGYPIMCHLESVQELINEKLIRTKGLWGPVHELGRNQQRQEWEFPPHTTEATCN
Sbjct: 721 SVGWMHAGYPIMCHLESVQELINEKLIRTKGLWGPVHELGRNQQRQEWEFPPHTTEATCN 780

Query: 781 LWCVYVHETVLGIPRSRANIALWPPVREKRVRIYLSKGPNVKNWNAWTALETYLQLQEAF 840
           LWCVYVHETVLGIPRSRANIALWPPVREKRVRIYLSKGPNVKNWNAWTALETYLQLQEAF
Sbjct: 781 LWCVYVHETVLGIPRSRANIALWPPVREKRVRIYLSKGPNVKNWNAWTALETYLQLQEAF 840

Query: 841 GWEPFIRLFTEYRNQTNLPTENVDKMNLWVKMFSHQVQKNLAPFFEAWAWPIQKEVATSL 900
           GWEPFIRLFTEYRNQTNLPTENVDKMNLWVKMFSHQVQKNLAPFFEAWAWPIQKEVATSL
Sbjct: 841 GWEPFIRLFTEYRNQTNLPTENVDKMNLWVKMFSHQVQKNLAPFFEAWAWPIQKEVATSL 900

Query: 901 AYLPEWKENIMKLYLLTQMPH 921
           AYLPEWKENIMKLYLLTQMPH
Sbjct: 901 AYLPEWKENIMKLYLLTQMPH 921


>gi|194097428 hypothetical protein LOC285966 A [Homo sapiens]
          Length = 845

 Score = 1103 bits (2852), Expect = 0.0
 Identities = 540/837 (64%), Positives = 654/837 (78%), Gaps = 2/837 (0%)

Query: 1   MAT-PSAAFEALMNGVTSWDVPEDAVPCELLLIGEASFPVMVNDMGQVLIAASSYGRGRL 59
           MAT  +AAFEALM+GVT WDVP   +P ELLLIGEA+FPVMVND GQVLIAASSYGRGRL
Sbjct: 1   MATIAAAAFEALMDGVTCWDVPRGPIPSELLLIGEAAFPVMVNDKGQVLIAASSYGRGRL 60

Query: 60  VVVSHEDYLVEAQLTPFLLNAVGWLCSSPGAPIGVHPSLAPLAKILEGSGVDAKVEPEVK 119
           VVVSHE YL    L PFLLNAV WLC  PGAP+GVHPSLAPL  IL+ +G++A+V+PE  
Sbjct: 61  VVVSHEGYLSHTGLAPFLLNAVSWLCPCPGAPVGVHPSLAPLVNILQDAGLEAQVKPEPG 120

Query: 120 DSLGVYCIDAYNETMTEKLVKFMKCGGGLLIGGQAWDWANQGEDERVLFTFPGNLVTSVA 179
           + LGVYCI+AYN+T+T  L++F+K GGGLLIGGQAW WA+Q   ++VL  FPGN VTSVA
Sbjct: 121 EPLGVYCINAYNDTLTATLIQFVKHGGGLLIGGQAWYWASQHGPDKVLSRFPGNKVTSVA 180

Query: 180 GIYFTDNKGDTSFFKVSKKMPKIPVLVSCEDDLSDDREELLHGISELDISNSDCFPSQLL 239
           G+YFTD  GD   FKVSKK+PKIP+ V   +D+  D+++LL GISELDI      PSQLL
Sbjct: 181 GVYFTDTYGDRDRFKVSKKVPKIPLHVRYGEDVRQDQQQLLEGISELDIRTGGV-PSQLL 239

Query: 240 VHGALAFPLGLDSYHGCVIAAARYGRGRVVVTGHKVLFTVGKLGPFLLNAVRWLDGGRRG 299
           VHGALAFPLGLD+   C +AAA YGRGRVV+  H+ L    K+GPFLLNAVRWL  G+ G
Sbjct: 240 VHGALAFPLGLDASLNCFLAAAHYGRGRVVLAAHECLLCAPKMGPFLLNAVRWLARGQTG 299

Query: 300 KIVVQTELRTLSGLLAVGGIDTSIEPNLTSDASVYCFEPVSEVGVKELQEFVAEGGGLFV 359
           K+ V T L+ L  LL+  G+  S+EP+L SD  VYC +  S+   K+LQEFVAEGGGL +
Sbjct: 300 KVGVNTNLKDLCPLLSEHGLQCSLEPHLNSDLCVYCCKAYSDKEAKQLQEFVAEGGGLLI 359

Query: 360 GAQAWWWAFKNPGVSPLARFPGNLLLNPFGISITSQSLNPGPFRTPKAGIRTYHFRSTLA 419
           G QAWWWA +NPG  PLA FPGN++LN FG+SI  Q+L  G F  P   +R+YHFR  L+
Sbjct: 360 GGQAWWWASQNPGHCPLAGFPGNIILNCFGLSILPQTLKAGCFPVPTPEMRSYHFRKALS 419

Query: 420 EFQVIMGRKRGNVEKGWLAKLGPDGAAFLQIPAEEIPAYMSVHRLLRKLLSRYRLPVATR 479
           +FQ I+  + GN+EK  LAKL  DGAAFLQIPAE +PAY+S+HRLLRK+L    LP  +R
Sbjct: 420 QFQAILNHENGNLEKSCLAKLRVDGAAFLQIPAEGVPAYISLHRLLRKMLRGSGLPAVSR 479

Query: 480 ENPVINDCCRGAMLSLATGLAHSGSDLSLLVPEIEDMYSSPYLRPSESPITVEVNCTNPG 539
           ENPV +D    A+LSLATGLAHSG+D S L   +     S  L PS+ PITVE+N  NPG
Sbjct: 480 ENPVASDSYEAAVLSLATGLAHSGTDCSQLAQGLGTWTCSSSLYPSKHPITVEINGINPG 539

Query: 540 TRYCWMSTGLYIPGRQIIEVSLPEAAASADLKIQIGCHTDDLTRASKLFRGPLVINRCCL 599
              CW+STGLY+   Q  EVSL EAAASA L++QIGCHTDDLT+A KL R P+V ++C +
Sbjct: 540 NNDCWVSTGLYLLEGQNAEVSLSEAAASAGLRVQIGCHTDDLTKARKLSRAPVVTHQCWM 599

Query: 600 DKPTKSITCLWGGLLYIIVPQNSKLGSVPVTVKGAVHAPYYKLGETTLEEWKRRIQENPG 659
           D+  +S++CLWGGLLY+IVP+ S+LG VPVT++GAV APYYKLG+T+LEEWKR++QEN  
Sbjct: 600 DRTERSVSCLWGGLLYVIVPKGSQLGPVPVTIRGAVPAPYYKLGKTSLEEWKRQMQENLA 659

Query: 660 PWGELATDNIILTVPTANLRTLENPEPLLRLWDEVMQAVARLGAEPFPLRLPQRIVADVQ 719
           PWGELATDNIILTVPT NL+ L++PEP+LRLWDE+MQAVARL AEPFP R P+RIVADVQ
Sbjct: 660 PWGELATDNIILTVPTTNLQALKDPEPVLRLWDEMMQAVARLAAEPFPFRRPERIVADVQ 719

Query: 720 ISVGWMHAGYPIMCHLESVQELINEKLIRTKGLWGPVHELGRNQQRQEWEFPPHTTEATC 779
           IS GWMH+GYPIMCHLESV+E+INE  +R++G+WGP+HELG NQQR  WEFPPHTTEATC
Sbjct: 720 ISAGWMHSGYPIMCHLESVKEIINEMDMRSRGVWGPIHELGHNQQRHGWEFPPHTTEATC 779

Query: 780 NLWCVYVHETVLGIPRSRANIALWPPVREKRVRIYLSKGPNVKNWNAWTALETYLQL 836
           NLW VYVHETVLGIPR++A+ AL PP RE+R++ +L KG  + +WN WTALETYLQ+
Sbjct: 780 NLWSVYVHETVLGIPRAQAHEALSPPERERRIKAHLGKGAPLCDWNVWTALETYLQV 836


>gi|194097425 hypothetical protein LOC285966 A [Homo sapiens]
          Length = 845

 Score = 1103 bits (2852), Expect = 0.0
 Identities = 540/837 (64%), Positives = 654/837 (78%), Gaps = 2/837 (0%)

Query: 1   MAT-PSAAFEALMNGVTSWDVPEDAVPCELLLIGEASFPVMVNDMGQVLIAASSYGRGRL 59
           MAT  +AAFEALM+GVT WDVP   +P ELLLIGEA+FPVMVND GQVLIAASSYGRGRL
Sbjct: 1   MATIAAAAFEALMDGVTCWDVPRGPIPSELLLIGEAAFPVMVNDKGQVLIAASSYGRGRL 60

Query: 60  VVVSHEDYLVEAQLTPFLLNAVGWLCSSPGAPIGVHPSLAPLAKILEGSGVDAKVEPEVK 119
           VVVSHE YL    L PFLLNAV WLC  PGAP+GVHPSLAPL  IL+ +G++A+V+PE  
Sbjct: 61  VVVSHEGYLSHTGLAPFLLNAVSWLCPCPGAPVGVHPSLAPLVNILQDAGLEAQVKPEPG 120

Query: 120 DSLGVYCIDAYNETMTEKLVKFMKCGGGLLIGGQAWDWANQGEDERVLFTFPGNLVTSVA 179
           + LGVYCI+AYN+T+T  L++F+K GGGLLIGGQAW WA+Q   ++VL  FPGN VTSVA
Sbjct: 121 EPLGVYCINAYNDTLTATLIQFVKHGGGLLIGGQAWYWASQHGPDKVLSRFPGNKVTSVA 180

Query: 180 GIYFTDNKGDTSFFKVSKKMPKIPVLVSCEDDLSDDREELLHGISELDISNSDCFPSQLL 239
           G+YFTD  GD   FKVSKK+PKIP+ V   +D+  D+++LL GISELDI      PSQLL
Sbjct: 181 GVYFTDTYGDRDRFKVSKKVPKIPLHVRYGEDVRQDQQQLLEGISELDIRTGGV-PSQLL 239

Query: 240 VHGALAFPLGLDSYHGCVIAAARYGRGRVVVTGHKVLFTVGKLGPFLLNAVRWLDGGRRG 299
           VHGALAFPLGLD+   C +AAA YGRGRVV+  H+ L    K+GPFLLNAVRWL  G+ G
Sbjct: 240 VHGALAFPLGLDASLNCFLAAAHYGRGRVVLAAHECLLCAPKMGPFLLNAVRWLARGQTG 299

Query: 300 KIVVQTELRTLSGLLAVGGIDTSIEPNLTSDASVYCFEPVSEVGVKELQEFVAEGGGLFV 359
           K+ V T L+ L  LL+  G+  S+EP+L SD  VYC +  S+   K+LQEFVAEGGGL +
Sbjct: 300 KVGVNTNLKDLCPLLSEHGLQCSLEPHLNSDLCVYCCKAYSDKEAKQLQEFVAEGGGLLI 359

Query: 360 GAQAWWWAFKNPGVSPLARFPGNLLLNPFGISITSQSLNPGPFRTPKAGIRTYHFRSTLA 419
           G QAWWWA +NPG  PLA FPGN++LN FG+SI  Q+L  G F  P   +R+YHFR  L+
Sbjct: 360 GGQAWWWASQNPGHCPLAGFPGNIILNCFGLSILPQTLKAGCFPVPTPEMRSYHFRKALS 419

Query: 420 EFQVIMGRKRGNVEKGWLAKLGPDGAAFLQIPAEEIPAYMSVHRLLRKLLSRYRLPVATR 479
           +FQ I+  + GN+EK  LAKL  DGAAFLQIPAE +PAY+S+HRLLRK+L    LP  +R
Sbjct: 420 QFQAILNHENGNLEKSCLAKLRVDGAAFLQIPAEGVPAYISLHRLLRKMLRGSGLPAVSR 479

Query: 480 ENPVINDCCRGAMLSLATGLAHSGSDLSLLVPEIEDMYSSPYLRPSESPITVEVNCTNPG 539
           ENPV +D    A+LSLATGLAHSG+D S L   +     S  L PS+ PITVE+N  NPG
Sbjct: 480 ENPVASDSYEAAVLSLATGLAHSGTDCSQLAQGLGTWTCSSSLYPSKHPITVEINGINPG 539

Query: 540 TRYCWMSTGLYIPGRQIIEVSLPEAAASADLKIQIGCHTDDLTRASKLFRGPLVINRCCL 599
              CW+STGLY+   Q  EVSL EAAASA L++QIGCHTDDLT+A KL R P+V ++C +
Sbjct: 540 NNDCWVSTGLYLLEGQNAEVSLSEAAASAGLRVQIGCHTDDLTKARKLSRAPVVTHQCWM 599

Query: 600 DKPTKSITCLWGGLLYIIVPQNSKLGSVPVTVKGAVHAPYYKLGETTLEEWKRRIQENPG 659
           D+  +S++CLWGGLLY+IVP+ S+LG VPVT++GAV APYYKLG+T+LEEWKR++QEN  
Sbjct: 600 DRTERSVSCLWGGLLYVIVPKGSQLGPVPVTIRGAVPAPYYKLGKTSLEEWKRQMQENLA 659

Query: 660 PWGELATDNIILTVPTANLRTLENPEPLLRLWDEVMQAVARLGAEPFPLRLPQRIVADVQ 719
           PWGELATDNIILTVPT NL+ L++PEP+LRLWDE+MQAVARL AEPFP R P+RIVADVQ
Sbjct: 660 PWGELATDNIILTVPTTNLQALKDPEPVLRLWDEMMQAVARLAAEPFPFRRPERIVADVQ 719

Query: 720 ISVGWMHAGYPIMCHLESVQELINEKLIRTKGLWGPVHELGRNQQRQEWEFPPHTTEATC 779
           IS GWMH+GYPIMCHLESV+E+INE  +R++G+WGP+HELG NQQR  WEFPPHTTEATC
Sbjct: 720 ISAGWMHSGYPIMCHLESVKEIINEMDMRSRGVWGPIHELGHNQQRHGWEFPPHTTEATC 779

Query: 780 NLWCVYVHETVLGIPRSRANIALWPPVREKRVRIYLSKGPNVKNWNAWTALETYLQL 836
           NLW VYVHETVLGIPR++A+ AL PP RE+R++ +L KG  + +WN WTALETYLQ+
Sbjct: 780 NLWSVYVHETVLGIPRAQAHEALSPPERERRIKAHLGKGAPLCDWNVWTALETYLQV 836


>gi|194097432 hypothetical protein LOC285966 B [Homo sapiens]
          Length = 564

 Score =  741 bits (1913), Expect = 0.0
 Identities = 354/555 (63%), Positives = 435/555 (78%)

Query: 282 LGPFLLNAVRWLDGGRRGKIVVQTELRTLSGLLAVGGIDTSIEPNLTSDASVYCFEPVSE 341
           +GPFLLNAVRWL  G+ GK+ V T L+ L  LL+  G+  S+EP+L SD  VYC +  S+
Sbjct: 1   MGPFLLNAVRWLARGQTGKVGVNTNLKDLCPLLSEHGLQCSLEPHLNSDLCVYCCKAYSD 60

Query: 342 VGVKELQEFVAEGGGLFVGAQAWWWAFKNPGVSPLARFPGNLLLNPFGISITSQSLNPGP 401
              K+LQEFVAEGGGL +G QAWWWA +NPG  PLA FPGN++LN FG+SI  Q+L  G 
Sbjct: 61  KEAKQLQEFVAEGGGLLIGGQAWWWASQNPGHCPLAGFPGNIILNCFGLSILPQTLKAGC 120

Query: 402 FRTPKAGIRTYHFRSTLAEFQVIMGRKRGNVEKGWLAKLGPDGAAFLQIPAEEIPAYMSV 461
           F  P   +R+YHFR  L++FQ I+  + GN+EK  LAKL  DGAAFLQIPAE +PAY+S+
Sbjct: 121 FPVPTPEMRSYHFRKALSQFQAILNHENGNLEKSCLAKLRVDGAAFLQIPAEGVPAYISL 180

Query: 462 HRLLRKLLSRYRLPVATRENPVINDCCRGAMLSLATGLAHSGSDLSLLVPEIEDMYSSPY 521
           HRLLRK+L    LP  +RENPV +D    A+LSLATGLAHSG+D S L   +     S  
Sbjct: 181 HRLLRKMLRGSGLPAVSRENPVASDSYEAAVLSLATGLAHSGTDCSQLAQGLGTWTCSSS 240

Query: 522 LRPSESPITVEVNCTNPGTRYCWMSTGLYIPGRQIIEVSLPEAAASADLKIQIGCHTDDL 581
           L PS+ PITVE+N  NPG   CW+STGLY+   Q  EVSL EAAASA L++QIGCHTDDL
Sbjct: 241 LYPSKHPITVEINGINPGNNDCWVSTGLYLLEGQNAEVSLSEAAASAGLRVQIGCHTDDL 300

Query: 582 TRASKLFRGPLVINRCCLDKPTKSITCLWGGLLYIIVPQNSKLGSVPVTVKGAVHAPYYK 641
           T+A KL R P+V ++C +D+  +S++CLWGGLLY+IVP+ S+LG VPVT++GAV APYYK
Sbjct: 301 TKARKLSRAPVVTHQCWMDRTERSVSCLWGGLLYVIVPKGSQLGPVPVTIRGAVPAPYYK 360

Query: 642 LGETTLEEWKRRIQENPGPWGELATDNIILTVPTANLRTLENPEPLLRLWDEVMQAVARL 701
           LG+T+LEEWKR++QEN  PWGELATDNIILTVPT NL+ L++PEP+LRLWDE+MQAVARL
Sbjct: 361 LGKTSLEEWKRQMQENLAPWGELATDNIILTVPTTNLQALKDPEPVLRLWDEMMQAVARL 420

Query: 702 GAEPFPLRLPQRIVADVQISVGWMHAGYPIMCHLESVQELINEKLIRTKGLWGPVHELGR 761
            AEPFP R P+RIVADVQIS GWMH+GYPIMCHLESV+E+INE  +R++G+WGP+HELG 
Sbjct: 421 AAEPFPFRRPERIVADVQISAGWMHSGYPIMCHLESVKEIINEMDMRSRGVWGPIHELGH 480

Query: 762 NQQRQEWEFPPHTTEATCNLWCVYVHETVLGIPRSRANIALWPPVREKRVRIYLSKGPNV 821
           NQQR  WEFPPHTTEATCNLW VYVHETVLGIPR++A+ AL PP RE+R++ +L KG  +
Sbjct: 481 NQQRHGWEFPPHTTEATCNLWSVYVHETVLGIPRAQAHEALSPPERERRIKAHLGKGAPL 540

Query: 822 KNWNAWTALETYLQL 836
            +WN WTALETYLQ+
Sbjct: 541 CDWNVWTALETYLQV 555



 Score = 93.2 bits (230), Expect = 1e-18
 Identities = 45/107 (42%), Positives = 63/107 (58%)

Query: 75  PFLLNAVGWLCSSPGAPIGVHPSLAPLAKILEGSGVDAKVEPEVKDSLGVYCIDAYNETM 134
           PFLLNAV WL       +GV+ +L  L  +L   G+   +EP +   L VYC  AY++  
Sbjct: 3   PFLLNAVRWLARGQTGKVGVNTNLKDLCPLLSEHGLQCSLEPHLNSDLCVYCCKAYSDKE 62

Query: 135 TEKLVKFMKCGGGLLIGGQAWDWANQGEDERVLFTFPGNLVTSVAGI 181
            ++L +F+  GGGLLIGGQAW WA+Q      L  FPGN++ +  G+
Sbjct: 63  AKQLQEFVAEGGGLLIGGQAWWWASQNPGHCPLAGFPGNIILNCFGL 109


>gi|239754750 PREDICTED: similar to FAM115A protein [Homo sapiens]
          Length = 195

 Score =  420 bits (1080), Expect = e-117
 Identities = 195/195 (100%), Positives = 195/195 (100%)

Query: 725 MHAGYPIMCHLESVQELINEKLIRTKGLWGPVHELGRNQQRQEWEFPPHTTEATCNLWCV 784
           MHAGYPIMCHLESVQELINEKLIRTKGLWGPVHELGRNQQRQEWEFPPHTTEATCNLWCV
Sbjct: 1   MHAGYPIMCHLESVQELINEKLIRTKGLWGPVHELGRNQQRQEWEFPPHTTEATCNLWCV 60

Query: 785 YVHETVLGIPRSRANIALWPPVREKRVRIYLSKGPNVKNWNAWTALETYLQLQEAFGWEP 844
           YVHETVLGIPRSRANIALWPPVREKRVRIYLSKGPNVKNWNAWTALETYLQLQEAFGWEP
Sbjct: 61  YVHETVLGIPRSRANIALWPPVREKRVRIYLSKGPNVKNWNAWTALETYLQLQEAFGWEP 120

Query: 845 FIRLFTEYRNQTNLPTENVDKMNLWVKMFSHQVQKNLAPFFEAWAWPIQKEVATSLAYLP 904
           FIRLFTEYRNQTNLPTENVDKMNLWVKMFSHQVQKNLAPFFEAWAWPIQKEVATSLAYLP
Sbjct: 121 FIRLFTEYRNQTNLPTENVDKMNLWVKMFSHQVQKNLAPFFEAWAWPIQKEVATSLAYLP 180

Query: 905 EWKENIMKLYLLTQM 919
           EWKENIMKLYLLTQM
Sbjct: 181 EWKENIMKLYLLTQM 195


>gi|209977080 REST corepressor 3 isoform a [Homo sapiens]
          Length = 553

 Score = 30.8 bits (68), Expect = 6.1
 Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 3/73 (4%)

Query: 643 GETTLEEWKRRIQENPGPWGELATDNIILTVPTANLRTLENPEPLLRLWDEVMQAVARLG 702
           G++T EE + +  + P   G           PTA + TL  P PLLR     + A   L 
Sbjct: 431 GKSTDEEEEAQTPQAPRTLGPSPPAPSSTPTPTAPIATLNQPPPLLR---PTLPAAPALH 487

Query: 703 AEPFPLRLPQRIV 715
            +P PL+   R +
Sbjct: 488 RQPPPLQQQARFI 500


>gi|8922733 REST corepressor 3 isoform d [Homo sapiens]
          Length = 495

 Score = 30.8 bits (68), Expect = 6.1
 Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 3/73 (4%)

Query: 643 GETTLEEWKRRIQENPGPWGELATDNIILTVPTANLRTLENPEPLLRLWDEVMQAVARLG 702
           G++T EE + +  + P   G           PTA + TL  P PLLR     + A   L 
Sbjct: 373 GKSTDEEEEAQTPQAPRTLGPSPPAPSSTPTPTAPIATLNQPPPLLR---PTLPAAPALH 429

Query: 703 AEPFPLRLPQRIV 715
            +P PL+   R +
Sbjct: 430 RQPPPLQQQARFI 442


>gi|5902072 serine (or cysteine) proteinase inhibitor, clade B
           (ovalbumin), member 3 [Homo sapiens]
          Length = 390

 Score = 30.4 bits (67), Expect = 7.9
 Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 1/54 (1%)

Query: 831 ETYLQLQEAF-GWEPFIRLFTEYRNQTNLPTENVDKMNLWVKMFSHQVQKNLAP 883
           +TYL LQE     + F +   E  +  N P E+  K+N WV+  +++  KNL P
Sbjct: 111 KTYLFLQEYLDAIKKFYQTSVESVDFANAPEESRKKINSWVESQTNEKIKNLIP 164


>gi|4826645 aquaporin 3 [Homo sapiens]
          Length = 292

 Score = 30.4 bits (67), Expect = 7.9
 Identities = 15/45 (33%), Positives = 18/45 (40%), Gaps = 3/45 (6%)

Query: 332 SVYCFEPVSEVGVKELQEFVAEGGGLFVGAQAWWWAFKNPGVSPL 376
           S Y   P  + G +        G  +F   Q WWW    P VSPL
Sbjct: 210 SGYAVNPARDFGPRLFTALAGWGSAVFTTGQHWWWV---PIVSPL 251


>gi|56676335 RAP1 interacting factor 1 [Homo sapiens]
          Length = 2472

 Score = 30.4 bits (67), Expect = 7.9
 Identities = 14/43 (32%), Positives = 22/43 (51%)

Query: 659 GPWGELATDNIILTVPTANLRTLENPEPLLRLWDEVMQAVARL 701
           GP   LA  + +L V   N + LEN E L ++W  ++  +  L
Sbjct: 617 GPTSPLAFSDSVLNVINQNAKQLENKEHLWKMWSVIVTPLTEL 659


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.137    0.434 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,079,311
Number of Sequences: 37866
Number of extensions: 1743058
Number of successful extensions: 3235
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 3219
Number of HSP's gapped (non-prelim): 12
length of query: 921
length of database: 18,247,518
effective HSP length: 112
effective length of query: 809
effective length of database: 14,006,526
effective search space: 11331279534
effective search space used: 11331279534
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 67 (30.4 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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