DEPDC5 35910

Name: DEPDC5	Sequence: fasta or formatted (1572aa)		NCBI GI: 7662222
Description: DEP domain containing 5 isoform 1		Referenced in: Additional Interaction Domain Families
Other entries for this name: alt prot [1594aa] DEP domain containing 5 isoform 3 alt prot [559aa] DEP domain containing 5 isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.1 96 3 C cysteine 1.8 29 2 D aspartate 5.5 86 2 E glutamate 6.3 99 3 F phenylalanine 4.8 76 1 G glycine 5.7 90 2 H histidine 2.9 45 2 I isoleucine 3.8 60 2 K lysine 4.6 73 2 L leucine 8.3 131 3 M methionine 2.9 45 2 N asparagine 3.5 55 2 P proline 5.3 83 3 Q glutamine 5.0 79 2 R arginine 6.0 95 4 S serine 9.7 153 3 T threonine 6.1 96 2 V valine 6.4 100 3 W tryptophan 1.6 25 1 Y tyrosine 3.6 56 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 DEP domain containing 5 isoform 1 DEPDC5 0.996 DEP domain containing 5 isoform 3 DEPDC5 0.345 DEP domain containing 5 isoform 2 DEPDC6 0.006 DEP domain containing 6 DVL3 0.005 dishevelled 3 DVL2 0.005 dishevelled 2 MUC21 0.004 mucin 21 DVL1 0.004 dishevelled 1 SMTN 0.003 smoothelin isoform b SMTN 0.003 smoothelin isoform c RAPGEF4 0.003 Rap guanine nucleotide exchange factor (GEF) 4 isof... RAPGEF4 0.003 Rap guanine nucleotide exchange factor (GEF) 4 isof... PIKFYVE 0.003 phosphatidylinositol-3-phosphate 5-kinase type III ... PIKFYVE 0.003 phosphatidylinositol-3-phosphate 5-kinase type III i... STIM2 0.003 stromal interaction molecule 2 SMTN 0.003 smoothelin isoform a MED1 0.003 mediator complex subunit 1 MUC12 0.003 PREDICTED: mucin 12 GJA10 0.003 gap junction protein, alpha 10 LOC100294249 0.003 PREDICTED: hypothetical protein XP_002344067 NCSTN 0.003 nicastrin precursor TNRC18 0.003 trinucleotide repeat containing 18 MLL 0.003 myeloid/lymphoid or mixed-lineage leukemia protein [... LOC100292681 0.003 PREDICTED: hypothetical protein LOC100289011 0.003 PREDICTED: hypothetical protein XP_002343210 UPF1 0.003 regulator of nonsense transcripts 1 FAM65A 0.003 hypothetical protein LOC79567 LOC729792 0.002 PREDICTED: hypothetical protein LOC729792 0.002 PREDICTED: hypothetical protein LOC729792 0.002 PREDICTED: hypothetical protein Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.