Guide to the Human Genome
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Name: ANKMY1 Sequence: fasta or formatted (941aa) NCBI GI: 75750529
Description:

ankyrin repeat and MYND domain containing 1 isoform 1

Referenced in:

Ankyrin Family
Zinc Finger Proteins

Other entries for this name:
alt prot [717aa] ankyrin repeat and MYND domain containing 1 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.1         57           4
 C cysteine            3.1         29           2
 D aspartate           5.4         51           2
 E glutamate           6.7         63           3
 F phenylalanine       4.5         42           2
 G glycine             7.5         71           2
 H histidine           2.9         27           1
 I isoleucine          3.7         35           2
 K lysine              5.4         51           3
 L leucine            11.8        111           3
 M methionine          2.6         24           1
 N asparagine          2.8         26           1
 P proline             6.5         61           3
 Q glutamine           3.8         36           1
 R arginine            5.6         53           3
 S serine              7.8         73           3
 T threonine           4.9         46           1
 V valine              4.4         41           2
 W tryptophan          1.3         12           1
 Y tyrosine            3.4         32           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ankyrin repeat and MYND domain containing 1 isoform ... 
ANKMY1                0.470   ankyrin repeat and MYND domain containing 1 isoform ...
RSPH1                 0.021   testis-specific gene A2 
ANKRD50               0.019   ankyrin repeat domain 50 
ANK1                  0.018   ankyrin 1 isoform 9 
ANK1                  0.018   ankyrin 1 isoform 1 
ANK1                  0.018   ankyrin 1 isoform 3 
ANK1                  0.018   ankyrin 1 isoform 2 
ANK1                  0.018   ankyrin 1 isoform 4 
ANK2                  0.018   ankyrin 2 isoform 3 
ANK2                  0.018   ankyrin 2 isoform 2 
ANK2                  0.018   ankyrin 2 isoform 1 
ANK3                  0.017   ankyrin 3 isoform 1 
ASB3                  0.017   ankyrin repeat and SOCS box-containing protein 3 iso...
ASB3                  0.017   ankyrin repeat and SOCS box-containing protein 3 isof...
ANKRD17               0.017   ankyrin repeat domain protein 17 isoform b 
ANKRD17               0.016   ankyrin repeat domain protein 17 isoform a 
MORN1                 0.015   MORN repeat containing 1 
ANKK1                 0.015   ankyrin repeat and kinase domain containing 1 
ANKRD44               0.014   ankyrin repeat domain 44 
TNKS2                 0.014   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
ASB16                 0.014   ankyrin repeat and SOCS box-containing protein 16 [H...
RSPH10B2              0.013   radial spoke head 10 homolog B2 
MORN4                 0.013   MORN repeat containing 4 
MORN4                 0.013   MORN repeat containing 4 
RSPH10B               0.013   radial spoke head 10 homolog B 
ANKRD28               0.013   ankyrin repeat domain 28 
ANKRD27               0.013   ankyrin repeat domain 27 (VPS9 domain) 
MORN2                 0.011   MORN repeat containing 2 
ANKS1A                0.011   ankyrin repeat and sterile alpha motif domain conta...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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