Guide to the Human Genome
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Name: SPDYE2 Sequence: fasta or formatted (258aa) NCBI GI: 71979927
Description:

speedy homolog E2

Referenced in:

Cyclins and Related Functions

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.2         16           1
 C cysteine            1.2          3           1
 D aspartate           4.3         11           2
 E glutamate           8.5         22           3
 F phenylalanine       5.8         15           2
 G glycine             1.2          3           1
 H histidine           3.1          8           2
 I isoleucine          3.9         10           1
 K lysine              6.2         16           1
 L leucine            11.2         29           2
 M methionine          3.1          8           1
 N asparagine          3.9         10           1
 P proline             5.0         13           1
 Q glutamine           3.5          9           1
 R arginine           14.7         38           3
 S serine              7.4         19           1
 T threonine           0.4          1           1
 V valine              3.9         10           1
 W tryptophan          3.5          9           2
 Y tyrosine            3.1          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   speedy homolog E2 
SPDYE6                1.000   speedy homolog E6 
SPDYE6                1.000   PREDICTED: speedy homolog E6 
SPDYE6                0.996   PREDICTED: speedy homolog E6 (Xenopus laevis) [Homo...
LOC442609             0.994   PREDICTED: similar to speedy homolog A isoform 1 [H...
LOC442609             0.994   PREDICTED: similar to speedy homolog A isoform 7 [H...
LOC442572             0.912   PREDICTED: WBSCR19-like protein 8-like isoform 2 [H...
LOC442572             0.912   PREDICTED: WBSCR19-like protein 8-like 
SPDYE5                0.816   speedy homolog E5 
SPDYE1                0.790   Williams Beuren syndrome chromosome region 19 protei...
LOC100288807          0.655   PREDICTED: hypothetical protein XP_002342780 
LOC100288807          0.655   PREDICTED: similar to Putative WBSCR19-like protein...
LOC100132585          0.569   PREDICTED: similar to speedy homolog A 
LOC100132585          0.569   PREDICTED: similar to speedy homolog A 
SPDYE3                0.494   speedy homolog E3 
SPDYE4                0.390   speedy homolog E4 
LOC100132581          0.127   PREDICTED: hypothetical protein 
LOC100132581          0.127   PREDICTED: hypothetical protein 
LOC442572             0.110   PREDICTED: hypothetical protein 
SPDYA                 0.108   speedy homolog A isoform 2 
SPDYA                 0.108   speedy homolog A isoform 1 
SPDYA                 0.108   speedy homolog A isoform 1 
SPDYC                 0.100   speedy C 
SRRM2                 0.027   splicing coactivator subunit SRm300 
PRPF4B                0.020   serine/threonine-protein kinase PRP4K 
GNAS                  0.020   GNAS complex locus XLas 
SON                   0.018   SON DNA-binding protein isoform F 
SON                   0.018   SON DNA-binding protein isoform B 
PRPF38A               0.016   PRP38 pre-mRNA processing factor 38 (yeast) domain c...
KIAA0100              0.016   hypothetical protein LOC9703 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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