Search of human proteins with 71037379

Search of human proteins with 71037379

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|71037379 liver glycogen phosphorylase [Homo sapiens]
         (847 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|71037379 liver glycogen phosphorylase [Homo sapiens]              1709   0.0  
gi|21361370 brain glycogen phosphorylase [Homo sapiens]              1438   0.0  
gi|5032009 muscle glycogen phosphorylase [Homo sapiens]              1418   0.0  
gi|59891448 rapamycin-insensitive companion of mTOR [Homo sapiens]     33   0.85 
gi|24308169 dynein, axonemal, heavy chain 3 [Homo sapiens]             32   1.9  
gi|149589008 peptidase D [Homo sapiens]                                31   4.2  
gi|4504919 keratin 8 [Homo sapiens]                                    30   9.4  

>gi|71037379 liver glycogen phosphorylase [Homo sapiens]
          Length = 847

 Score = 1709 bits (4426), Expect = 0.0
 Identities = 847/847 (100%), Positives = 847/847 (100%)

Query: 1   MAKPLTDQEKRRQISIRGIVGVENVAELKKSFNRHLHFTLVKDRNVATTRDYYFALAHTV 60
           MAKPLTDQEKRRQISIRGIVGVENVAELKKSFNRHLHFTLVKDRNVATTRDYYFALAHTV
Sbjct: 1   MAKPLTDQEKRRQISIRGIVGVENVAELKKSFNRHLHFTLVKDRNVATTRDYYFALAHTV 60

Query: 61  RDHLVGRWIRTQQHYYDKCPKRVYYLSLEFYMGRTLQNTMINLGLQNACDEAIYQLGLDI 120
           RDHLVGRWIRTQQHYYDKCPKRVYYLSLEFYMGRTLQNTMINLGLQNACDEAIYQLGLDI
Sbjct: 61  RDHLVGRWIRTQQHYYDKCPKRVYYLSLEFYMGRTLQNTMINLGLQNACDEAIYQLGLDI 120

Query: 121 EELEEIEEDAGLGNGGLGRLAACFLDSMATLGLAAYGYGIRYEYGIFNQKIRDGWQVEEA 180
           EELEEIEEDAGLGNGGLGRLAACFLDSMATLGLAAYGYGIRYEYGIFNQKIRDGWQVEEA
Sbjct: 121 EELEEIEEDAGLGNGGLGRLAACFLDSMATLGLAAYGYGIRYEYGIFNQKIRDGWQVEEA 180

Query: 181 DDWLRYGNPWEKSRPEFMLPVHFYGKVEHTNTGTKWIDTQVVLALPYDTPVPGYMNNTVN 240
           DDWLRYGNPWEKSRPEFMLPVHFYGKVEHTNTGTKWIDTQVVLALPYDTPVPGYMNNTVN
Sbjct: 181 DDWLRYGNPWEKSRPEFMLPVHFYGKVEHTNTGTKWIDTQVVLALPYDTPVPGYMNNTVN 240

Query: 241 TMRLWSARAPNDFNLRDFNVGDYIQAVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFV 300
           TMRLWSARAPNDFNLRDFNVGDYIQAVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFV
Sbjct: 241 TMRLWSARAPNDFNLRDFNVGDYIQAVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFV 300

Query: 301 VAATLQDIIRRFKASKFGSTRGAGTVFDAFPDQVAIQLNDTHPALAIPELMRIFVDIEKL 360
           VAATLQDIIRRFKASKFGSTRGAGTVFDAFPDQVAIQLNDTHPALAIPELMRIFVDIEKL
Sbjct: 301 VAATLQDIIRRFKASKFGSTRGAGTVFDAFPDQVAIQLNDTHPALAIPELMRIFVDIEKL 360

Query: 361 PWSKAWELTQKTFAYTNHTVLPEALERWPVDLVEKLLPRHLEIIYEINQKHLDRIVALFP 420
           PWSKAWELTQKTFAYTNHTVLPEALERWPVDLVEKLLPRHLEIIYEINQKHLDRIVALFP
Sbjct: 361 PWSKAWELTQKTFAYTNHTVLPEALERWPVDLVEKLLPRHLEIIYEINQKHLDRIVALFP 420

Query: 421 KDVDRLRRMSLIEEEGSKRINMAHLCIVGSHAVNGVAKIHSDIVKTKVFKDFSELEPDKF 480
           KDVDRLRRMSLIEEEGSKRINMAHLCIVGSHAVNGVAKIHSDIVKTKVFKDFSELEPDKF
Sbjct: 421 KDVDRLRRMSLIEEEGSKRINMAHLCIVGSHAVNGVAKIHSDIVKTKVFKDFSELEPDKF 480

Query: 481 QNKTNGITPRRWLLLCNPGLAELIAEKIGEDYVKDLSQLTKLHSFLGDDVFLRELAKVKQ 540
           QNKTNGITPRRWLLLCNPGLAELIAEKIGEDYVKDLSQLTKLHSFLGDDVFLRELAKVKQ
Sbjct: 481 QNKTNGITPRRWLLLCNPGLAELIAEKIGEDYVKDLSQLTKLHSFLGDDVFLRELAKVKQ 540

Query: 541 ENKLKFSQFLETEYKVKINPSSMFDVQVKRIHEYKRQLLNCLHVITMYNRIKKDPKKLFV 600
           ENKLKFSQFLETEYKVKINPSSMFDVQVKRIHEYKRQLLNCLHVITMYNRIKKDPKKLFV
Sbjct: 541 ENKLKFSQFLETEYKVKINPSSMFDVQVKRIHEYKRQLLNCLHVITMYNRIKKDPKKLFV 600

Query: 601 PRTVIIGGKAAPGYHMAKMIIKLITSVADVVNNDPMVGSKLKVIFLENYRVSLAEKVIPA 660
           PRTVIIGGKAAPGYHMAKMIIKLITSVADVVNNDPMVGSKLKVIFLENYRVSLAEKVIPA
Sbjct: 601 PRTVIIGGKAAPGYHMAKMIIKLITSVADVVNNDPMVGSKLKVIFLENYRVSLAEKVIPA 660

Query: 661 TDLSEQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENLFIFGMRIDDVA 720
           TDLSEQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENLFIFGMRIDDVA
Sbjct: 661 TDLSEQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENLFIFGMRIDDVA 720

Query: 721 ALDKKGYEAKEYYEALPELKLVIDQIDNGFFSPKQPDLFKDIINMLFYHDRFKVFADYEA 780
           ALDKKGYEAKEYYEALPELKLVIDQIDNGFFSPKQPDLFKDIINMLFYHDRFKVFADYEA
Sbjct: 721 ALDKKGYEAKEYYEALPELKLVIDQIDNGFFSPKQPDLFKDIINMLFYHDRFKVFADYEA 780

Query: 781 YVKCQDKVSQLYMNPKAWNTMVLKNIAASGKFSSDRTIKEYAQNIWNVEPSDLKISLSNE 840
           YVKCQDKVSQLYMNPKAWNTMVLKNIAASGKFSSDRTIKEYAQNIWNVEPSDLKISLSNE
Sbjct: 781 YVKCQDKVSQLYMNPKAWNTMVLKNIAASGKFSSDRTIKEYAQNIWNVEPSDLKISLSNE 840

Query: 841 SNKVNGN 847
           SNKVNGN
Sbjct: 841 SNKVNGN 847


>gi|21361370 brain glycogen phosphorylase [Homo sapiens]
          Length = 843

 Score = 1438 bits (3722), Expect = 0.0
 Identities = 687/839 (81%), Positives = 765/839 (91%)

Query: 1   MAKPLTDQEKRRQISIRGIVGVENVAELKKSFNRHLHFTLVKDRNVATTRDYYFALAHTV 60
           MAKPLTD EKR+QIS+RG+ G+ +VAE++KSFNRHLHFTLVKDRNVAT RDY+FALAHTV
Sbjct: 1   MAKPLTDSEKRKQISVRGLAGLGDVAEVRKSFNRHLHFTLVKDRNVATPRDYFFALAHTV 60

Query: 61  RDHLVGRWIRTQQHYYDKCPKRVYYLSLEFYMGRTLQNTMINLGLQNACDEAIYQLGLDI 120
           RDHLVGRWIRTQQHYY++ PKR+YYLSLEFYMGRTLQNTM+NLGLQNACDEAIYQLGLD+
Sbjct: 61  RDHLVGRWIRTQQHYYERDPKRIYYLSLEFYMGRTLQNTMVNLGLQNACDEAIYQLGLDL 120

Query: 121 EELEEIEEDAGLGNGGLGRLAACFLDSMATLGLAAYGYGIRYEYGIFNQKIRDGWQVEEA 180
           EELEEIEEDAGLGNGGLGRLAACFLDSMATLGLAAYGYGIRYE+GIFNQKI +GWQVEEA
Sbjct: 121 EELEEIEEDAGLGNGGLGRLAACFLDSMATLGLAAYGYGIRYEFGIFNQKIVNGWQVEEA 180

Query: 181 DDWLRYGNPWEKSRPEFMLPVHFYGKVEHTNTGTKWIDTQVVLALPYDTPVPGYMNNTVN 240
           DDWLRYGNPWEK+RPE+MLPVHFYG+VEHT  G KW+DTQVVLA+PYDTPVPGY NNTVN
Sbjct: 181 DDWLRYGNPWEKARPEYMLPVHFYGRVEHTPDGVKWLDTQVVLAMPYDTPVPGYKNNTVN 240

Query: 241 TMRLWSARAPNDFNLRDFNVGDYIQAVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFV 300
           TMRLWSA+APNDF L+DFNVGDYI+AVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFV
Sbjct: 241 TMRLWSAKAPNDFKLQDFNVGDYIEAVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFV 300

Query: 301 VAATLQDIIRRFKASKFGSTRGAGTVFDAFPDQVAIQLNDTHPALAIPELMRIFVDIEKL 360
           VAATLQDIIRRFK+SKFG      T F+ FPD+VAIQLNDTHPAL+IPELMRI VD+EK+
Sbjct: 301 VAATLQDIIRRFKSSKFGCRDPVRTCFETFPDKVAIQLNDTHPALSIPELMRILVDVEKV 360

Query: 361 PWSKAWELTQKTFAYTNHTVLPEALERWPVDLVEKLLPRHLEIIYEINQKHLDRIVALFP 420
            W KAWE+T+KT AYTNHTVLPEALERWPV + EKLLPRHLEIIY INQ+HLD + ALFP
Sbjct: 361 DWDKAWEITKKTCAYTNHTVLPEALERWPVSMFEKLLPRHLEIIYAINQRHLDHVAALFP 420

Query: 421 KDVDRLRRMSLIEEEGSKRINMAHLCIVGSHAVNGVAKIHSDIVKTKVFKDFSELEPDKF 480
            DVDRLRRMS+IEE   KRINMAHLC++GSHAVNGVA+IHS+IVK  VFKDF ELEP+KF
Sbjct: 421 GDVDRLRRMSVIEEGDCKRINMAHLCVIGSHAVNGVARIHSEIVKQSVFKDFYELEPEKF 480

Query: 481 QNKTNGITPRRWLLLCNPGLAELIAEKIGEDYVKDLSQLTKLHSFLGDDVFLRELAKVKQ 540
           QNKTNGITPRRWLLLCNPGLA+ I EKIGE+++ DLSQL KL   + D+VF+R++AKVKQ
Sbjct: 481 QNKTNGITPRRWLLLCNPGLADTIVEKIGEEFLTDLSQLKKLLPLVSDEVFIRDVAKVKQ 540

Query: 541 ENKLKFSQFLETEYKVKINPSSMFDVQVKRIHEYKRQLLNCLHVITMYNRIKKDPKKLFV 600
           ENKLKFS FLE EYKVKINPSSMFDV VKRIHEYKRQLLNCLHV+T+YNRIK+DP K FV
Sbjct: 541 ENKLKFSAFLEKEYKVKINPSSMFDVHVKRIHEYKRQLLNCLHVVTLYNRIKRDPAKAFV 600

Query: 601 PRTVIIGGKAAPGYHMAKMIIKLITSVADVVNNDPMVGSKLKVIFLENYRVSLAEKVIPA 660
           PRTV+IGGKAAPGYHMAK+IIKL+TS+ DVVN+DP+VG +LKVIFLENYRVSLAEKVIPA
Sbjct: 601 PRTVMIGGKAAPGYHMAKLIIKLVTSIGDVVNHDPVVGDRLKVIFLENYRVSLAEKVIPA 660

Query: 661 TDLSEQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENLFIFGMRIDDVA 720
            DLS+QISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAG ENLFIFG+R++DV 
Sbjct: 661 ADLSQQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGAENLFIFGLRVEDVE 720

Query: 721 ALDKKGYEAKEYYEALPELKLVIDQIDNGFFSPKQPDLFKDIINMLFYHDRFKVFADYEA 780
           ALD+KGY A+EYY+ LPELK  +DQI +GFFSPK+PD FKDI+NML +HDRFKVFADYEA
Sbjct: 721 ALDRKGYNAREYYDHLPELKQAVDQISSGFFSPKEPDCFKDIVNMLMHHDRFKVFADYEA 780

Query: 781 YVKCQDKVSQLYMNPKAWNTMVLKNIAASGKFSSDRTIKEYAQNIWNVEPSDLKISLSN 839
           Y++CQ +V QLY NPK W   V++NIA SGKFSSDRTI EYA+ IW VEPSDL+I   N
Sbjct: 781 YMQCQAQVDQLYRNPKEWTKKVIRNIACSGKFSSDRTITEYAREIWGVEPSDLQIPPPN 839


>gi|5032009 muscle glycogen phosphorylase [Homo sapiens]
          Length = 842

 Score = 1418 bits (3670), Expect = 0.0
 Identities = 673/841 (80%), Positives = 762/841 (90%)

Query: 1   MAKPLTDQEKRRQISIRGIVGVENVAELKKSFNRHLHFTLVKDRNVATTRDYYFALAHTV 60
           M++PL+DQEKR+QIS+RG+ GVENV ELKK+FNRHLHFTLVKDRNVAT RDYYFALAHTV
Sbjct: 1   MSRPLSDQEKRKQISVRGLAGVENVTELKKNFNRHLHFTLVKDRNVATPRDYYFALAHTV 60

Query: 61  RDHLVGRWIRTQQHYYDKCPKRVYYLSLEFYMGRTLQNTMINLGLQNACDEAIYQLGLDI 120
           RDHLVGRWIRTQQHYY+K PKR+YYLSLEFYMGRTLQNTM+NL L+NACDEA YQLGLD+
Sbjct: 61  RDHLVGRWIRTQQHYYEKDPKRIYYLSLEFYMGRTLQNTMVNLALENACDEATYQLGLDM 120

Query: 121 EELEEIEEDAGLGNGGLGRLAACFLDSMATLGLAAYGYGIRYEYGIFNQKIRDGWQVEEA 180
           EELEEIEEDAGLGNGGLGRLAACFLDSMATLGLAAYGYGIRYE+GIFNQKI  GWQ+EEA
Sbjct: 121 EELEEIEEDAGLGNGGLGRLAACFLDSMATLGLAAYGYGIRYEFGIFNQKISGGWQMEEA 180

Query: 181 DDWLRYGNPWEKSRPEFMLPVHFYGKVEHTNTGTKWIDTQVVLALPYDTPVPGYMNNTVN 240
           DDWLRYGNPWEK+RPEF LPVHFYG VEHT+ G KW+DTQVVLA+PYDTPVPGY NN VN
Sbjct: 181 DDWLRYGNPWEKARPEFTLPVHFYGHVEHTSQGAKWVDTQVVLAMPYDTPVPGYRNNVVN 240

Query: 241 TMRLWSARAPNDFNLRDFNVGDYIQAVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFV 300
           TMRLWSA+APNDFNL+DFNVG YIQAVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFV
Sbjct: 241 TMRLWSAKAPNDFNLKDFNVGGYIQAVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFV 300

Query: 301 VAATLQDIIRRFKASKFGSTRGAGTVFDAFPDQVAIQLNDTHPALAIPELMRIFVDIEKL 360
           VAATLQDIIRRFK+SKFG      T FDAFPD+VAIQLNDTHP+LAIPELMRI VD+E++
Sbjct: 301 VAATLQDIIRRFKSSKFGCRDPVRTNFDAFPDKVAIQLNDTHPSLAIPELMRILVDLERM 360

Query: 361 PWSKAWELTQKTFAYTNHTVLPEALERWPVDLVEKLLPRHLEIIYEINQKHLDRIVALFP 420
            W KAW++T +T AYTNHTVLPEALERWPV L+E LLPRHL+IIYEINQ+ L+R+ A FP
Sbjct: 361 DWDKAWDVTVRTCAYTNHTVLPEALERWPVHLLETLLPRHLQIIYEINQRFLNRVAAAFP 420

Query: 421 KDVDRLRRMSLIEEEGSKRINMAHLCIVGSHAVNGVAKIHSDIVKTKVFKDFSELEPDKF 480
            DVDRLRRMSL+EE   KRINMAHLCI GSHAVNGVA+IHS+I+K  +FKDF ELEP KF
Sbjct: 421 GDVDRLRRMSLVEEGAVKRINMAHLCIAGSHAVNGVARIHSEILKKTIFKDFYELEPHKF 480

Query: 481 QNKTNGITPRRWLLLCNPGLAELIAEKIGEDYVKDLSQLTKLHSFLGDDVFLRELAKVKQ 540
           QNKTNGITPRRWL+LCNPGLAE+IAE+IGED++ DL QL KL SF+ D+ F+R++AKVKQ
Sbjct: 481 QNKTNGITPRRWLVLCNPGLAEVIAERIGEDFISDLDQLRKLLSFVDDEAFIRDVAKVKQ 540

Query: 541 ENKLKFSQFLETEYKVKINPSSMFDVQVKRIHEYKRQLLNCLHVITMYNRIKKDPKKLFV 600
           ENKLKF+ +LE EYKV INP+S+FD+QVKRIHEYKRQLLNCLHVIT+YNRIK++P K FV
Sbjct: 541 ENKLKFAAYLEREYKVHINPNSLFDIQVKRIHEYKRQLLNCLHVITLYNRIKREPNKFFV 600

Query: 601 PRTVIIGGKAAPGYHMAKMIIKLITSVADVVNNDPMVGSKLKVIFLENYRVSLAEKVIPA 660
           PRTV+IGGKAAPGYHMAKMII+L+T++ DVVN+DP VG +L+VIFLENYRVSLAEKVIPA
Sbjct: 601 PRTVMIGGKAAPGYHMAKMIIRLVTAIGDVVNHDPAVGDRLRVIFLENYRVSLAEKVIPA 660

Query: 661 TDLSEQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENLFIFGMRIDDVA 720
            DLSEQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGEEN FIFGMR++DV 
Sbjct: 661 ADLSEQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENFFIFGMRVEDVD 720

Query: 721 ALDKKGYEAKEYYEALPELKLVIDQIDNGFFSPKQPDLFKDIINMLFYHDRFKVFADYEA 780
            LD++GY A+EYY+ +PEL+ VI+Q+ +GFFSPKQPDLFKDI+NML +HDRFKVFADYE 
Sbjct: 721 KLDQRGYNAQEYYDRIPELRQVIEQLSSGFFSPKQPDLFKDIVNMLMHHDRFKVFADYED 780

Query: 781 YVKCQDKVSQLYMNPKAWNTMVLKNIAASGKFSSDRTIKEYAQNIWNVEPSDLKISLSNE 840
           Y+KCQ+KVS LY NP+ W  MV++NIA SGKFSSDRTI +YA+ IW VEPS  ++   +E
Sbjct: 781 YIKCQEKVSALYKNPREWTRMVIRNIATSGKFSSDRTIAQYAREIWGVEPSRQRLPAPDE 840

Query: 841 S 841
           +
Sbjct: 841 A 841


>gi|59891448 rapamycin-insensitive companion of mTOR [Homo sapiens]
          Length = 1708

 Score = 33.5 bits (75), Expect = 0.85
 Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 1/45 (2%)

Query: 179 EADDWLRYGNPWEKSRPEFMLPVHFYGKVEHTNTGTKWIDTQVVL 223
           + D+++R  N     RP   LP+H YG++ H  TG   ++ Q ++
Sbjct: 859 DGDNYVRRSNQ-RLQRPHVYLPIHLYGQLVHHKTGCHLLEVQNII 902


>gi|24308169 dynein, axonemal, heavy chain 3 [Homo sapiens]
          Length = 4116

 Score = 32.3 bits (72), Expect = 1.9
 Identities = 17/48 (35%), Positives = 27/48 (56%)

Query: 719  VAALDKKGYEAKEYYEALPELKLVIDQIDNGFFSPKQPDLFKDIINML 766
            V  +D     AKE Y A P ++L+   ID+G++  K+     DI++ML
Sbjct: 2137 VVFVDDLNMPAKEVYGAQPPIELLRQWIDHGYWFDKKDTTRLDIVDML 2184


>gi|149589008 peptidase D [Homo sapiens]
          Length = 493

 Score = 31.2 bits (69), Expect = 4.2
 Identities = 17/54 (31%), Positives = 27/54 (50%)

Query: 459 IHSDIVKTKVFKDFSELEPDKFQNKTNGITPRRWLLLCNPGLAELIAEKIGEDY 512
           +H +IV+ +VFK   ELE  ++ NK +    R  +     G+ E   E + E Y
Sbjct: 176 LHPEIVECRVFKTDMELEVLRYTNKISSEAHREVMKAVKVGMKEYELESLFEHY 229


>gi|4504919 keratin 8 [Homo sapiens]
          Length = 483

 Score = 30.0 bits (66), Expect = 9.4
 Identities = 61/315 (19%), Positives = 120/315 (38%), Gaps = 36/315 (11%)

Query: 453 VNGVAKIHSDIVKTKVFKDFSELEPDKFQNKTNGITPRRWLLLCNPGLAELIAEKIGEDY 512
           +  V     + +KT   K  S ++  +F  + N +   +W LL     A    + + E Y
Sbjct: 84  IQAVRTQEKEQIKTLNNKFASFIDKVRFLEQQNKMLETKWSLLQQQKTARSNMDNMFESY 143

Query: 513 VKDL--------SQLTKLHSFLGDDVFLRELAKVKQENKLKFSQFLETEY---KVKINPS 561
           + +L         +  KL + LG+   L E  K K E+++     +E E+   K  ++ +
Sbjct: 144 INNLRRQLETLGQEKLKLEAELGNMQGLVEDFKNKYEDEINKRTEMENEFVLIKKDVDEA 203

Query: 562 SMFDVQVKRIHEYKRQLLNCLHVITMYNRIKKDPKKLFVPRTVIIGGKAAPGYHMAKMII 621
            M  V+++   E     +N L    +Y    ++ +      +V++    +    M  +I 
Sbjct: 204 YMNKVELESRLEGLTDEINFLR--QLYEEEIRELQSQISDTSVVLSMDNSRSLDMDSIIA 261

Query: 622 KLITSVADVVNNDPMVGSKLKVIFLENYRVSLAEK--------VIPATDLSEQISTAGTE 673
           ++     D+ N        +  I  E  + SLA K            ++++  IS    E
Sbjct: 262 EVKAQYEDIANRSRAEAESMYQIKYEELQ-SLAGKHGDDLRRTKTEISEMNRNISRLQAE 320

Query: 674 ASGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENLFIFGMRIDDV-AALDKKGYEAKEY 732
             G    +  L  A          +  AE+ GE  +     ++ ++ AAL +   +    
Sbjct: 321 IEGLKGQRASLEAA----------IADAEQRGELAIKDANAKLSELEAALQRAKQDMARQ 370

Query: 733 ---YEALPELKLVID 744
              Y+ L  +KL +D
Sbjct: 371 LREYQELMNVKLALD 385


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.137    0.406 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,151,233
Number of Sequences: 37866
Number of extensions: 1305667
Number of successful extensions: 2656
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 2648
Number of HSP's gapped (non-prelim): 9
length of query: 847
length of database: 18,247,518
effective HSP length: 111
effective length of query: 736
effective length of database: 14,044,392
effective search space: 10336672512
effective search space used: 10336672512
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.