Search of human proteins with 7019551

Search of human proteins with 7019551

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|7019551 UbiA prenyltransferase domain containing 1 [Homo
sapiens]
         (338 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|7019551 UbiA prenyltransferase domain containing 1 [Homo sapi...   669   0.0  
gi|34808710 solute carrier family 19 member 1 [Homo sapiens]           31   1.8  
gi|71773324 aldehyde dehydrogenase 3B1 isoform b [Homo sapiens]        30   3.1  
gi|42476325 solute carrier family 18 (vesicular monoamine), memb...    29   5.2  
gi|5803050 KDEL receptor 2 isoform 1 [Homo sapiens]                    29   5.2  
gi|78000213 DNA methyltransferase 1 associated protein 1 [Homo s...    29   6.8  
gi|78000211 DNA methyltransferase 1 associated protein 1 [Homo s...    29   6.8  
gi|13123776 DNA methyltransferase 1 associated protein 1 [Homo s...    29   6.8  

>gi|7019551 UbiA prenyltransferase domain containing 1 [Homo
           sapiens]
          Length = 338

 Score =  669 bits (1725), Expect = 0.0
 Identities = 338/338 (100%), Positives = 338/338 (100%)

Query: 1   MAASQVLGEKINILSGETVKAGDRDPLGNDCPEQDRLPQRSWRQKCASYVLALRPWSFSA 60
           MAASQVLGEKINILSGETVKAGDRDPLGNDCPEQDRLPQRSWRQKCASYVLALRPWSFSA
Sbjct: 1   MAASQVLGEKINILSGETVKAGDRDPLGNDCPEQDRLPQRSWRQKCASYVLALRPWSFSA 60

Query: 61  SLTPVALGSALAYRSHGVLDPRLLVGCAVAVLAVHGAGNLVNTYYDFSKGIDHKKSDDRT 120
           SLTPVALGSALAYRSHGVLDPRLLVGCAVAVLAVHGAGNLVNTYYDFSKGIDHKKSDDRT
Sbjct: 61  SLTPVALGSALAYRSHGVLDPRLLVGCAVAVLAVHGAGNLVNTYYDFSKGIDHKKSDDRT 120

Query: 121 LVDRILEPQDVVRFGVFLYTLGCVCAACLYYLSPLKLEHLALIYFGGLSGSFLYTGGIGF 180
           LVDRILEPQDVVRFGVFLYTLGCVCAACLYYLSPLKLEHLALIYFGGLSGSFLYTGGIGF
Sbjct: 121 LVDRILEPQDVVRFGVFLYTLGCVCAACLYYLSPLKLEHLALIYFGGLSGSFLYTGGIGF 180

Query: 181 KYVALGDLIILITFGPLAVMFAYAIQVGSLAIFPLVYAIPLALSTEAILHSNNTRDMESD 240
           KYVALGDLIILITFGPLAVMFAYAIQVGSLAIFPLVYAIPLALSTEAILHSNNTRDMESD
Sbjct: 181 KYVALGDLIILITFGPLAVMFAYAIQVGSLAIFPLVYAIPLALSTEAILHSNNTRDMESD 240

Query: 241 REAGIVTLAILIGPTFSYILYNTLLFLPYLVFSILATHCTISLALPLLTIPMAFSLERQF 300
           REAGIVTLAILIGPTFSYILYNTLLFLPYLVFSILATHCTISLALPLLTIPMAFSLERQF
Sbjct: 241 REAGIVTLAILIGPTFSYILYNTLLFLPYLVFSILATHCTISLALPLLTIPMAFSLERQF 300

Query: 301 RSQAFNKLPQRTAKLNLLLGLFYVFGIILAPAGSLPKI 338
           RSQAFNKLPQRTAKLNLLLGLFYVFGIILAPAGSLPKI
Sbjct: 301 RSQAFNKLPQRTAKLNLLLGLFYVFGIILAPAGSLPKI 338


>gi|34808710 solute carrier family 19 member 1 [Homo sapiens]
          Length = 591

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 38/150 (25%), Positives = 67/150 (44%), Gaps = 9/150 (6%)

Query: 160 LALIYFGGLSGSFLYTGGIGFKYVALGDLIILITFGPLAVMFAYAIQVGSLAIFPLVYAI 219
           L+  Y   L   FL T  + +  V L   +  ++F  + ++      V  + +  L Y++
Sbjct: 72  LSYSYLAVLVPVFLLTDYLRYTPVLL---LQGLSFVSVWLLLLLGHSVAHMQLMELFYSV 128

Query: 220 PLA--LSTEAILHSNNTRDMESDREAGIVTLAILIGPTFSYILYNTLLFLPYLVFSILAT 277
            +A  ++  + + S   R     R AG    A+L+G   S +L   L+ +  + FS L  
Sbjct: 129 TMAARIAYSSYIFSL-VRPARYQRVAGYSRAAVLLGVFTSSVLGQLLVTVGRVSFSTLNY 187

Query: 278 HCTISLALPLLTIPMAFSLERQFRSQAFNK 307
              ISLA    ++ +A  L+R  RS  FN+
Sbjct: 188 ---ISLAFLTFSVVLALFLKRPKRSLFFNR 214


>gi|71773324 aldehyde dehydrogenase 3B1 isoform b [Homo sapiens]
          Length = 431

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 19/57 (33%), Positives = 28/57 (49%)

Query: 25  DPLGNDCPEQDRLPQRSWRQKCASYVLALRPWSFSASLTPVALGSALAYRSHGVLDP 81
           D L  D  +  +L     R++    VL + PW++  +LT V L  ALA  +  VL P
Sbjct: 46  DALAQDLHKATQLDSAFIRKEPFGLVLIIAPWNYPLNLTLVPLVGALAAGNCVVLKP 102


>gi|42476325 solute carrier family 18 (vesicular monoamine), member
           2 [Homo sapiens]
          Length = 514

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 30/111 (27%), Positives = 47/111 (42%), Gaps = 11/111 (9%)

Query: 173 LYTGGIGFKYVALGDLIILITFGPLAVMFAYAIQVGSLAIFPLVYAIPLALSTEA---IL 229
           L T  IG+         I+       +MFA++     L I   +  I  + S+ A   +L
Sbjct: 151 LLTNRIGYPIPIFAGFCIMFVS---TIMFAFSSSYAFLLIARSLQGIGSSCSSVAGMGML 207

Query: 230 HSNNTRDMESDREAGI----VTLAILIGPTFSYILYNTL-LFLPYLVFSIL 275
            S  T D E     GI    + + +L+GP F  +LY  +    P+LV + L
Sbjct: 208 ASVYTDDEERGNVMGIALGGLAMGVLVGPPFGSVLYEFVGKTAPFLVLAAL 258


>gi|5803050 KDEL receptor 2 isoform 1 [Homo sapiens]
          Length = 212

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%)

Query: 178 IGFKYVALGDLIILIT--FGPLAVMFAYAIQVGSLAIFPLVYAIPLALSTEAI 228
           + F  V +G L  L+   F PL +++ ++I + S+AI P ++ I      E I
Sbjct: 95  VEFLVVPVGGLSFLVNHDFSPLEILWTFSIYLESVAILPQLFMISKTGEAETI 147


>gi|78000213 DNA methyltransferase 1 associated protein 1 [Homo
           sapiens]
          Length = 467

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 18/44 (40%), Positives = 19/44 (43%)

Query: 136 VFLYTLGCVCAACLYYLSPLKLEHLALIYFGGLSGSFLYTGGIG 179
           V LY L   CA C Y L  L+  H AL   G L G      G G
Sbjct: 372 VLLYELKQACANCEYELQMLRHRHEALARAGVLGGPATPASGPG 415


>gi|78000211 DNA methyltransferase 1 associated protein 1 [Homo
           sapiens]
          Length = 467

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 18/44 (40%), Positives = 19/44 (43%)

Query: 136 VFLYTLGCVCAACLYYLSPLKLEHLALIYFGGLSGSFLYTGGIG 179
           V LY L   CA C Y L  L+  H AL   G L G      G G
Sbjct: 372 VLLYELKQACANCEYELQMLRHRHEALARAGVLGGPATPASGPG 415


>gi|13123776 DNA methyltransferase 1 associated protein 1 [Homo
           sapiens]
          Length = 467

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 18/44 (40%), Positives = 19/44 (43%)

Query: 136 VFLYTLGCVCAACLYYLSPLKLEHLALIYFGGLSGSFLYTGGIG 179
           V LY L   CA C Y L  L+  H AL   G L G      G G
Sbjct: 372 VLLYELKQACANCEYELQMLRHRHEALARAGVLGGPATPASGPG 415


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.326    0.142    0.428 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,911,928
Number of Sequences: 37866
Number of extensions: 502138
Number of successful extensions: 1099
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 1094
Number of HSP's gapped (non-prelim): 8
length of query: 338
length of database: 18,247,518
effective HSP length: 103
effective length of query: 235
effective length of database: 14,347,320
effective search space: 3371620200
effective search space used: 3371620200
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.