LSP1 34015

Name: LSP1	Sequence: fasta or formatted (277aa)		NCBI GI: 61742793
Description: lymphocyte-specific protein 1 isoform 2		Not currently referenced in the text
Other entries for this name: alt prot {339aa} lymphocyte-specific protein 1 isoform 1 alt mRNA {277aa} lymphocyte-specific protein 1 isoform 2 alt mRNA {277aa} lymphocyte-specific protein 1 isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.9 19 2 C cysteine 1.1 3 1 D aspartate 5.1 14 1 E glutamate 12.3 34 3 F phenylalanine 0.7 2 1 G glycine 7.9 22 2 H histidine 1.8 5 1 I isoleucine 3.2 9 1 K lysine 7.9 22 2 L leucine 7.6 21 2 M methionine 1.1 3 1 N asparagine 1.1 3 1 P proline 8.3 23 2 Q glutamine 7.6 21 2 R arginine 4.0 11 1 S serine 11.2 31 2 T threonine 5.8 16 2 V valine 3.6 10 1 W tryptophan 1.4 4 1 Y tyrosine 1.4 4 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 lymphocyte-specific protein 1 isoform 2 LSP1 1.000 lymphocyte-specific protein 1 isoform 2 LSP1 1.000 lymphocyte-specific protein 1 isoform 2 LSP1 1.000 lymphocyte-specific protein 1 isoform 1 CALD1 0.084 caldesmon 1 isoform 5 CALD1 0.084 caldesmon 1 isoform 4 CALD1 0.084 caldesmon 1 isoform 3 CALD1 0.084 caldesmon 1 isoform 2 CALD1 0.084 caldesmon 1 isoform 1 LOC100133284 0.062 PREDICTED: similar to hCG1791648 LOC100133284 0.062 PREDICTED: similar to hCG1791648 LOC100133284 0.060 PREDICTED: similar to hCG1791648 NEFM 0.054 neurofilament, medium polypeptide 150kDa isoform 1 ... NEFM 0.054 neurofilament, medium polypeptide 150kDa isoform 2 ... RPGR 0.026 retinitis pigmentosa GTPase regulator isoform C [Hom... RGPD3 0.024 RANBP2-like and GRIP domain containing 3 SLC24A1 0.022 solute carrier family 24 (sodium/potassium/calcium ex... CDC2L1 0.022 cell division cycle 2-like 1 (PITSLRE proteins) isof... CDC2L1 0.022 cell division cycle 2-like 1 (PITSLRE proteins) isof... CDC2L1 0.022 cell division cycle 2-like 1 (PITSLRE proteins) isof... CDC2L1 0.022 cell division cycle 2-like 1 (PITSLRE proteins) isof... CDC2L1 0.022 cell division cycle 2-like 1 (PITSLRE proteins) isof... CDC2L1 0.022 cell division cycle 2-like 1 (PITSLRE proteins) isof... GIGYF1 0.022 PERQ amino acid rich, with GYF domain 1 ENAH 0.021 enabled homolog isoform a ENAH 0.021 enabled homolog isoform b C10orf12 0.021 hypothetical protein LOC26148 CENPB 0.019 centromere protein B NIPBL 0.019 delangin isoform B NIPBL 0.019 delangin isoform A Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.