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Search of human proteins with 60302875
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|60302875 shugoshin-like 1 isoform A1 [Homo sapiens]
(527 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|60302875 shugoshin-like 1 isoform A1 [Homo sapiens] 1054 0.0
gi|60302870 shugoshin-like 1 isoform A2 [Homo sapiens] 1043 0.0
gi|60302877 shugoshin-like 1 isoform B1 [Homo sapiens] 350 2e-96
gi|60302873 shugoshin-like 1 isoform B2 [Homo sapiens] 350 2e-96
gi|60302879 shugoshin-like 1 isoform C1 [Homo sapiens] 315 5e-86
gi|24308448 shugoshin-like 1 isoform C2 [Homo sapiens] 315 5e-86
gi|55741677 SET domain containing 1A [Homo sapiens] 47 6e-05
gi|239752449 PREDICTED: hypothetical protein [Homo sapiens] 43 6e-04
gi|157817073 Cdc2-related kinase, arginine/serine-rich isoform 2... 43 8e-04
gi|157817023 Cdc2-related kinase, arginine/serine-rich isoform 1... 43 8e-04
gi|239508778 PREDICTED: hypothetical protein, partial [Homo sapi... 42 0.001
gi|38569484 kinesin family member 21A [Homo sapiens] 42 0.001
gi|117935038 cylicin, basic protein of sperm head cytoskeleton 1... 42 0.002
gi|117553580 adaptor-related protein complex 3, delta 1 subunit ... 41 0.002
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 41 0.002
gi|102467235 inner centromere protein antigens 135/155kDa isofor... 41 0.003
gi|102467242 inner centromere protein antigens 135/155kDa isofor... 41 0.003
gi|239754909 PREDICTED: hypothetical protein [Homo sapiens] 40 0.004
gi|239749449 PREDICTED: hypothetical protein [Homo sapiens] 40 0.004
gi|134948605 ankyrin repeat domain 12 isoform 2 [Homo sapiens] 40 0.004
gi|134948558 ankyrin repeat domain 12 isoform 1 [Homo sapiens] 40 0.004
gi|190194412 thyroid hormone receptor interactor 11 [Homo sapiens] 40 0.005
gi|21361684 G patch domain containing 1 [Homo sapiens] 40 0.005
gi|27734775 hypothetical protein LOC286499 [Homo sapiens] 40 0.005
gi|87299628 biorientation of chromosomes in cell division 1-like... 40 0.007
gi|118600973 RNA binding motif protein, X-linked 2 [Homo sapiens] 40 0.007
gi|118766347 zinc finger CCCH-type domain containing 6 [Homo sap... 40 0.007
gi|17978469 cyclin T2 isoform b [Homo sapiens] 39 0.009
gi|42560244 peptidylprolyl isomerase G [Homo sapiens] 39 0.009
gi|148839362 LSM14 homolog B [Homo sapiens] 39 0.009
>gi|60302875 shugoshin-like 1 isoform A1 [Homo sapiens]
Length = 527
Score = 1054 bits (2725), Expect = 0.0
Identities = 527/527 (100%), Positives = 527/527 (100%)
Query: 1 MAKERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN 60
MAKERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN
Sbjct: 1 MAKERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN 60
Query: 61 NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSS 120
NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSS
Sbjct: 61 NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSS 120
Query: 121 GMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIEDQIPTIPQDTLGVDFDSGEAKS 180
GMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIEDQIPTIPQDTLGVDFDSGEAKS
Sbjct: 121 GMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIEDQIPTIPQDTLGVDFDSGEAKS 180
Query: 181 TDNVLPRTVSVRSSLKKHCNSICQFDSLDDFETSHLAGKSFEFERVGFLDPLVNMHIPEN 240
TDNVLPRTVSVRSSLKKHCNSICQFDSLDDFETSHLAGKSFEFERVGFLDPLVNMHIPEN
Sbjct: 181 TDNVLPRTVSVRSSLKKHCNSICQFDSLDDFETSHLAGKSFEFERVGFLDPLVNMHIPEN 240
Query: 241 VQHNACQWSKDQVNLSPKLIQPGTFTKTKEDILESKSEQTKSKQRDTQERKREEKRKANR 300
VQHNACQWSKDQVNLSPKLIQPGTFTKTKEDILESKSEQTKSKQRDTQERKREEKRKANR
Sbjct: 241 VQHNACQWSKDQVNLSPKLIQPGTFTKTKEDILESKSEQTKSKQRDTQERKREEKRKANR 300
Query: 301 RKSKRMSKYKENKSENKKTVPQKKMHKSVSSNDAYNFNLEEGVHLTPFRQKVSNDSNREE 360
RKSKRMSKYKENKSENKKTVPQKKMHKSVSSNDAYNFNLEEGVHLTPFRQKVSNDSNREE
Sbjct: 301 RKSKRMSKYKENKSENKKTVPQKKMHKSVSSNDAYNFNLEEGVHLTPFRQKVSNDSNREE 360
Query: 361 NNESEVSLCESSGSGDDSDDLYLPTCKYIQNPTSNSDRPVTRPLAKRALKYTDEKETEGS 420
NNESEVSLCESSGSGDDSDDLYLPTCKYIQNPTSNSDRPVTRPLAKRALKYTDEKETEGS
Sbjct: 361 NNESEVSLCESSGSGDDSDDLYLPTCKYIQNPTSNSDRPVTRPLAKRALKYTDEKETEGS 420
Query: 421 KPTKTPTTTPPETQQSPHLSLKDITNVSLYPVVKIRRLSLSPKKNKASPAVALPKRRCTA 480
KPTKTPTTTPPETQQSPHLSLKDITNVSLYPVVKIRRLSLSPKKNKASPAVALPKRRCTA
Sbjct: 421 KPTKTPTTTPPETQQSPHLSLKDITNVSLYPVVKIRRLSLSPKKNKASPAVALPKRRCTA 480
Query: 481 SVNYKEPTLASKLRRGDPFTDLCFLNSPIFKQKKDLRRSKKSMKQIQ 527
SVNYKEPTLASKLRRGDPFTDLCFLNSPIFKQKKDLRRSKKSMKQIQ
Sbjct: 481 SVNYKEPTLASKLRRGDPFTDLCFLNSPIFKQKKDLRRSKKSMKQIQ 527
>gi|60302870 shugoshin-like 1 isoform A2 [Homo sapiens]
Length = 561
Score = 1043 bits (2698), Expect = 0.0
Identities = 521/526 (99%), Positives = 523/526 (99%)
Query: 1 MAKERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN 60
MAKERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN
Sbjct: 1 MAKERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN 60
Query: 61 NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSS 120
NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSS
Sbjct: 61 NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSS 120
Query: 121 GMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIEDQIPTIPQDTLGVDFDSGEAKS 180
GMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIEDQIPTIPQDTLGVDFDSGEAKS
Sbjct: 121 GMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIEDQIPTIPQDTLGVDFDSGEAKS 180
Query: 181 TDNVLPRTVSVRSSLKKHCNSICQFDSLDDFETSHLAGKSFEFERVGFLDPLVNMHIPEN 240
TDNVLPRTVSVRSSLKKHCNSICQFDSLDDFETSHLAGKSFEFERVGFLDPLVNMHIPEN
Sbjct: 181 TDNVLPRTVSVRSSLKKHCNSICQFDSLDDFETSHLAGKSFEFERVGFLDPLVNMHIPEN 240
Query: 241 VQHNACQWSKDQVNLSPKLIQPGTFTKTKEDILESKSEQTKSKQRDTQERKREEKRKANR 300
VQHNACQWSKDQVNLSPKLIQPGTFTKTKEDILESKSEQTKSKQRDTQERKREEKRKANR
Sbjct: 241 VQHNACQWSKDQVNLSPKLIQPGTFTKTKEDILESKSEQTKSKQRDTQERKREEKRKANR 300
Query: 301 RKSKRMSKYKENKSENKKTVPQKKMHKSVSSNDAYNFNLEEGVHLTPFRQKVSNDSNREE 360
RKSKRMSKYKENKSENKKTVPQKKMHKSVSSNDAYNFNLEEGVHLTPFRQKVSNDSNREE
Sbjct: 301 RKSKRMSKYKENKSENKKTVPQKKMHKSVSSNDAYNFNLEEGVHLTPFRQKVSNDSNREE 360
Query: 361 NNESEVSLCESSGSGDDSDDLYLPTCKYIQNPTSNSDRPVTRPLAKRALKYTDEKETEGS 420
NNESEVSLCESSGSGDDSDDLYLPTCKYIQNPTSNSDRPVTRPLAKRALKYTDEKETEGS
Sbjct: 361 NNESEVSLCESSGSGDDSDDLYLPTCKYIQNPTSNSDRPVTRPLAKRALKYTDEKETEGS 420
Query: 421 KPTKTPTTTPPETQQSPHLSLKDITNVSLYPVVKIRRLSLSPKKNKASPAVALPKRRCTA 480
KPTKTPTTTPPETQQSPHLSLKDITNVSLYPVVKIRRLSLSPKKNKASPAVALPKRRCTA
Sbjct: 421 KPTKTPTTTPPETQQSPHLSLKDITNVSLYPVVKIRRLSLSPKKNKASPAVALPKRRCTA 480
Query: 481 SVNYKEPTLASKLRRGDPFTDLCFLNSPIFKQKKDLRRSKKSMKQI 526
SVNYKEPTLASKLRRGDPFTDLCFLNSPIFKQKKDLRRSKK ++
Sbjct: 481 SVNYKEPTLASKLRRGDPFTDLCFLNSPIFKQKKDLRRSKKRALEV 526
>gi|60302877 shugoshin-like 1 isoform B1 [Homo sapiens]
Length = 275
Score = 350 bits (897), Expect = 2e-96
Identities = 176/181 (97%), Positives = 176/181 (97%)
Query: 1 MAKERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN 60
MAKERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN
Sbjct: 1 MAKERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN 60
Query: 61 NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSS 120
NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSS
Sbjct: 61 NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSS 120
Query: 121 GMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIEDQIPTIPQDTLGVDFDSGEAKS 180
GMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIEDQIPTIPQDTLGVDFDS
Sbjct: 121 GMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIEDQIPTIPQDTLGVDFDSATPPE 180
Query: 181 T 181
T
Sbjct: 181 T 181
Score = 199 bits (507), Expect = 4e-51
Identities = 99/101 (98%), Positives = 100/101 (99%)
Query: 427 TTTPPETQQSPHLSLKDITNVSLYPVVKIRRLSLSPKKNKASPAVALPKRRCTASVNYKE 486
+ TPPETQQSPHLSLKDITNVSLYPVVKIRRLSLSPKKNKASPAVALPKRRCTASVNYKE
Sbjct: 175 SATPPETQQSPHLSLKDITNVSLYPVVKIRRLSLSPKKNKASPAVALPKRRCTASVNYKE 234
Query: 487 PTLASKLRRGDPFTDLCFLNSPIFKQKKDLRRSKKSMKQIQ 527
PTLASKLRRGDPFTDLCFLNSPIFKQKKDLRRSKKSMKQIQ
Sbjct: 235 PTLASKLRRGDPFTDLCFLNSPIFKQKKDLRRSKKSMKQIQ 275
>gi|60302873 shugoshin-like 1 isoform B2 [Homo sapiens]
Length = 309
Score = 350 bits (897), Expect = 2e-96
Identities = 176/181 (97%), Positives = 176/181 (97%)
Query: 1 MAKERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN 60
MAKERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN
Sbjct: 1 MAKERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN 60
Query: 61 NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSS 120
NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSS
Sbjct: 61 NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSS 120
Query: 121 GMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIEDQIPTIPQDTLGVDFDSGEAKS 180
GMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIEDQIPTIPQDTLGVDFDS
Sbjct: 121 GMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIEDQIPTIPQDTLGVDFDSATPPE 180
Query: 181 T 181
T
Sbjct: 181 T 181
Score = 189 bits (480), Expect = 5e-48
Identities = 93/100 (93%), Positives = 96/100 (96%)
Query: 427 TTTPPETQQSPHLSLKDITNVSLYPVVKIRRLSLSPKKNKASPAVALPKRRCTASVNYKE 486
+ TPPETQQSPHLSLKDITNVSLYPVVKIRRLSLSPKKNKASPAVALPKRRCTASVNYKE
Sbjct: 175 SATPPETQQSPHLSLKDITNVSLYPVVKIRRLSLSPKKNKASPAVALPKRRCTASVNYKE 234
Query: 487 PTLASKLRRGDPFTDLCFLNSPIFKQKKDLRRSKKSMKQI 526
PTLASKLRRGDPFTDLCFLNSPIFKQKKDLRRSKK ++
Sbjct: 235 PTLASKLRRGDPFTDLCFLNSPIFKQKKDLRRSKKRALEV 274
>gi|60302879 shugoshin-like 1 isoform C1 [Homo sapiens]
Length = 258
Score = 315 bits (808), Expect = 5e-86
Identities = 160/166 (96%), Positives = 160/166 (96%)
Query: 1 MAKERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN 60
MAKERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN
Sbjct: 1 MAKERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN 60
Query: 61 NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSS 120
NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSS
Sbjct: 61 NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSS 120
Query: 121 GMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIEDQIPTIPQ 166
GMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIE P Q
Sbjct: 121 GMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIEATPPETQQ 166
Score = 201 bits (511), Expect = 1e-51
Identities = 102/115 (88%), Positives = 104/115 (90%)
Query: 413 DEKETEGSKPTKTPTTTPPETQQSPHLSLKDITNVSLYPVVKIRRLSLSPKKNKASPAVA 472
+E E G + TPPETQQSPHLSLKDITNVSLYPVVKIRRLSLSPKKNKASPAVA
Sbjct: 144 EETELPGQGESFQIEATPPETQQSPHLSLKDITNVSLYPVVKIRRLSLSPKKNKASPAVA 203
Query: 473 LPKRRCTASVNYKEPTLASKLRRGDPFTDLCFLNSPIFKQKKDLRRSKKSMKQIQ 527
LPKRRCTASVNYKEPTLASKLRRGDPFTDLCFLNSPIFKQKKDLRRSKKSMKQIQ
Sbjct: 204 LPKRRCTASVNYKEPTLASKLRRGDPFTDLCFLNSPIFKQKKDLRRSKKSMKQIQ 258
>gi|24308448 shugoshin-like 1 isoform C2 [Homo sapiens]
Length = 292
Score = 315 bits (808), Expect = 5e-86
Identities = 160/166 (96%), Positives = 160/166 (96%)
Query: 1 MAKERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN 60
MAKERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN
Sbjct: 1 MAKERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN 60
Query: 61 NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSS 120
NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSS
Sbjct: 61 NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSS 120
Query: 121 GMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIEDQIPTIPQ 166
GMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIE P Q
Sbjct: 121 GMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIEATPPETQQ 166
Score = 191 bits (484), Expect = 2e-48
Identities = 96/114 (84%), Positives = 100/114 (87%)
Query: 413 DEKETEGSKPTKTPTTTPPETQQSPHLSLKDITNVSLYPVVKIRRLSLSPKKNKASPAVA 472
+E E G + TPPETQQSPHLSLKDITNVSLYPVVKIRRLSLSPKKNKASPAVA
Sbjct: 144 EETELPGQGESFQIEATPPETQQSPHLSLKDITNVSLYPVVKIRRLSLSPKKNKASPAVA 203
Query: 473 LPKRRCTASVNYKEPTLASKLRRGDPFTDLCFLNSPIFKQKKDLRRSKKSMKQI 526
LPKRRCTASVNYKEPTLASKLRRGDPFTDLCFLNSPIFKQKKDLRRSKK ++
Sbjct: 204 LPKRRCTASVNYKEPTLASKLRRGDPFTDLCFLNSPIFKQKKDLRRSKKRALEV 257
>gi|55741677 SET domain containing 1A [Homo sapiens]
Length = 1707
Score = 46.6 bits (109), Expect = 6e-05
Identities = 39/172 (22%), Positives = 74/172 (43%), Gaps = 5/172 (2%)
Query: 261 QPGTFTKTKEDILESKSEQTKSKQRDTQERKREEKRKANRRKSKRMSKYKENKSENKKTV 320
+P T + ED E + E + + T+ KR+E+R + K R S +++ E
Sbjct: 913 RPSTPAEEDEDDPEQEKEAGEPGRPGTKPPKRDEERGKTQGK-HRKSFALDSEGEEASQE 971
Query: 321 PQKKMHKSVSSNDAYNFNLEEGVHLTPFRQKVSNDSNREENNESEVSL-CESSGSGDDSD 379
+ + D + + EE V T +VS+ + E ++ S+ SL +S G D +
Sbjct: 972 SSSEKDEEDDEEDEEDEDREEAVDTTKKETEVSDGEDEESDSSSKCSLYADSDGENDSTS 1031
Query: 380 DLYLPTCKYIQNPTSNSDRPVTRPLAKRALKYTDEKETEGSKPTKTPTTTPP 431
D + +S+S + + + + + E E E +P P+ +PP
Sbjct: 1032 D---SESSSSSSSSSSSSSSSSSSSSSSSSESSSEDEEEEERPAALPSASPP 1080
>gi|239752449 PREDICTED: hypothetical protein [Homo sapiens]
Length = 170
Score = 43.1 bits (100), Expect = 6e-04
Identities = 27/122 (22%), Positives = 54/122 (44%), Gaps = 24/122 (19%)
Query: 213 TSHLAGKSFEFERVGFLDPLVNMHIPENVQHNACQWSKDQVNLSPKLIQPGTFTKTKEDI 272
T L GK F + F D ++H+P H Q +E+
Sbjct: 70 THRLKGKIFHLISIAFCDAGPSLHLP---LHGLPQ---------------------REEK 105
Query: 273 LESKSEQTKSKQRDTQERKREEKRKANRRKSKRMSKYKENKSENKKTVPQKKMHKSVSSN 332
E + E+ K K++ +++K+++K+K ++K K+ + ++ K + K+ +KK K +
Sbjct: 106 KEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKKTGNE 165
Query: 333 DA 334
A
Sbjct: 166 GA 167
>gi|157817073 Cdc2-related kinase, arginine/serine-rich isoform 2
[Homo sapiens]
Length = 1481
Score = 42.7 bits (99), Expect = 8e-04
Identities = 51/242 (21%), Positives = 101/242 (41%), Gaps = 16/242 (6%)
Query: 250 KDQVNLSPKLIQPGTFTKTKEDILESKSEQTKSKQRDTQERKREEKRKANRRKSKRMSKY 309
KD+++ S K T K + +S S++++S + +E+ R+E+ + K + S
Sbjct: 144 KDRISGSSKRSNEETDDYGKAQVAKSSSKESRSSKLH-KEKTRKERELKSGHKDRSKSHR 202
Query: 310 KENKSENKKTV---------PQKKMHKSVSSNDAYN-FNLEEGVHLTPFRQKVSNDSNRE 359
K ++ KTV P +K S +D+ + + + L+P R S++ +
Sbjct: 203 KRETPKSYKTVDSPKRRSRSPHRKWSDSSKQDDSPSGASYGQDYDLSPSRSHTSSNYDSY 262
Query: 360 ENNESEVSLCESSGSGDDSDDLYLPTCKYIQNPTSNSDRPVTRPLAKRALKYTDEKETEG 419
+ + S +S Y + + +P S R V+ +R+ Y E G
Sbjct: 263 KKSPGSTSRRQSVSPPYKEPSAYQSSTR-SPSPYSRRQRSVSPYSRRRSSSY----ERSG 317
Query: 420 SKPTKTPTTTPPETQQSPHLSLKDITNVSLYPVVKIRRLSLSPKKNKASPAVALPKRRCT 479
S ++P+ SP LS + ++ L ++ S SP ++ S + + KR +
Sbjct: 318 SYSGRSPSPYGRRRSSSPFLSKRSLSRSPLPSRKSMKSRSRSPAYSRHSSSHSKKKRSSS 377
Query: 480 AS 481
S
Sbjct: 378 RS 379
Score = 31.2 bits (69), Expect = 2.4
Identities = 36/144 (25%), Positives = 53/144 (36%), Gaps = 26/144 (18%)
Query: 301 RKSKRMSKYKENKSENKKTVPQKKMHKSVSSNDAYNFNLEEGVHLTPFRQKVSNDSNR-- 358
RK + K++ E+KK K+ KS + N +T +V N S+
Sbjct: 429 RKENSSVEAKDSGLESKKLPRSVKLEKSAPDTELVN--------VTHLNTEVKNSSDTGK 480
Query: 359 ---EENNESEVSLCESSGSGDDSDDLYLPTCKYIQNPTSNSDRPVTRPLAKRALKYTDEK 415
+EN+E + + DS + L T S++ PL
Sbjct: 481 VKLDENSEKHLVKDLKAQGTRDSKPIALKEEIVTPKETETSEKETPPPLP---------- 530
Query: 416 ETEGSKPTKTPTTTPPETQQSPHL 439
T S P PTTTPP Q+P L
Sbjct: 531 -TIASPPPPLPTTTPP--PQTPPL 551
>gi|157817023 Cdc2-related kinase, arginine/serine-rich isoform 1
[Homo sapiens]
Length = 1490
Score = 42.7 bits (99), Expect = 8e-04
Identities = 51/242 (21%), Positives = 101/242 (41%), Gaps = 16/242 (6%)
Query: 250 KDQVNLSPKLIQPGTFTKTKEDILESKSEQTKSKQRDTQERKREEKRKANRRKSKRMSKY 309
KD+++ S K T K + +S S++++S + +E+ R+E+ + K + S
Sbjct: 144 KDRISGSSKRSNEETDDYGKAQVAKSSSKESRSSKLH-KEKTRKERELKSGHKDRSKSHR 202
Query: 310 KENKSENKKTV---------PQKKMHKSVSSNDAYN-FNLEEGVHLTPFRQKVSNDSNRE 359
K ++ KTV P +K S +D+ + + + L+P R S++ +
Sbjct: 203 KRETPKSYKTVDSPKRRSRSPHRKWSDSSKQDDSPSGASYGQDYDLSPSRSHTSSNYDSY 262
Query: 360 ENNESEVSLCESSGSGDDSDDLYLPTCKYIQNPTSNSDRPVTRPLAKRALKYTDEKETEG 419
+ + S +S Y + + +P S R V+ +R+ Y E G
Sbjct: 263 KKSPGSTSRRQSVSPPYKEPSAYQSSTR-SPSPYSRRQRSVSPYSRRRSSSY----ERSG 317
Query: 420 SKPTKTPTTTPPETQQSPHLSLKDITNVSLYPVVKIRRLSLSPKKNKASPAVALPKRRCT 479
S ++P+ SP LS + ++ L ++ S SP ++ S + + KR +
Sbjct: 318 SYSGRSPSPYGRRRSSSPFLSKRSLSRSPLPSRKSMKSRSRSPAYSRHSSSHSKKKRSSS 377
Query: 480 AS 481
S
Sbjct: 378 RS 379
Score = 31.2 bits (69), Expect = 2.4
Identities = 36/144 (25%), Positives = 53/144 (36%), Gaps = 26/144 (18%)
Query: 301 RKSKRMSKYKENKSENKKTVPQKKMHKSVSSNDAYNFNLEEGVHLTPFRQKVSNDSNR-- 358
RK + K++ E+KK K+ KS + N +T +V N S+
Sbjct: 429 RKENSSVEAKDSGLESKKLPRSVKLEKSAPDTELVN--------VTHLNTEVKNSSDTGK 480
Query: 359 ---EENNESEVSLCESSGSGDDSDDLYLPTCKYIQNPTSNSDRPVTRPLAKRALKYTDEK 415
+EN+E + + DS + L T S++ PL
Sbjct: 481 VKLDENSEKHLVKDLKAQGTRDSKPIALKEEIVTPKETETSEKETPPPLP---------- 530
Query: 416 ETEGSKPTKTPTTTPPETQQSPHL 439
T S P PTTTPP Q+P L
Sbjct: 531 -TIASPPPPLPTTTPP--PQTPPL 551
>gi|239508778 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 123
Score = 42.4 bits (98), Expect = 0.001
Identities = 24/100 (24%), Positives = 45/100 (45%)
Query: 266 TKTKEDILESKSEQTKSKQRDTQERKREEKRKANRRKSKRMSKYKENKSENKKTVPQKKM 325
T+ E+ E + ++ K K++ ++RK +EK+K + KR K +E K +K +K+
Sbjct: 13 TEETEETEEEEEKEGKRKEKRKEKRKEKEKKKKTKETEKRKEKEEEEKKRKRKRKKKKEE 72
Query: 326 HKSVSSNDAYNFNLEEGVHLTPFRQKVSNDSNREENNESE 365
+ + EE R+K R+E E +
Sbjct: 73 EEREEEEEEEEEEKEEEEKEEGRRRKKKKKRRRKEEEEEK 112
Score = 41.2 bits (95), Expect = 0.002
Identities = 25/99 (25%), Positives = 43/99 (43%), Gaps = 20/99 (20%)
Query: 267 KTKEDILESKSEQTKSKQRDTQERKREEKRKANRRKSKRMSKYKENKSENKKTVPQKKMH 326
K K+ E E ++++ + +E KR+EKRK R++ ++ K KE + +K +KK
Sbjct: 4 KKKKKETEETEETEETEEEEEKEGKRKEKRKEKRKEKEKKKKTKETEKRKEKEEEEKKRK 63
Query: 327 KSVSSNDAYNFNLEEGVHLTPFRQKVSNDSNREENNESE 365
+ R+K + REE E E
Sbjct: 64 RK--------------------RKKKKEEEEREEEEEEE 82
Score = 38.9 bits (89), Expect = 0.012
Identities = 18/61 (29%), Positives = 33/61 (54%)
Query: 267 KTKEDILESKSEQTKSKQRDTQERKREEKRKANRRKSKRMSKYKENKSENKKTVPQKKMH 326
K K + + E+ + ++ + +E++ EEK + RRK K+ + KE + E KK +K
Sbjct: 63 KRKRKKKKEEEEREEEEEEEEEEKEEEEKEEGRRRKKKKKRRRKEEEEEKKKKRRRKTKK 122
Query: 327 K 327
K
Sbjct: 123 K 123
>gi|38569484 kinesin family member 21A [Homo sapiens]
Length = 1661
Score = 42.0 bits (97), Expect = 0.001
Identities = 26/80 (32%), Positives = 36/80 (45%), Gaps = 7/80 (8%)
Query: 300 RRKSKRMSKYKENKSENKKTVPQKKMHKSVSSNDAYNFNLEEGVHLTPFRQKVSNDSNRE 359
+RK KR K K +N T +KK K VS + +EE Q+VS+ + E
Sbjct: 549 KRKEKRKKKSVAGKEDNTDTDQEKKEEKGVSERENNELEVEES-------QEVSDHEDEE 601
Query: 360 ENNESEVSLCESSGSGDDSD 379
E E E + S D+SD
Sbjct: 602 EEEEEEEDDIDGGESSDESD 621
>gi|117935038 cylicin, basic protein of sperm head cytoskeleton 1
[Homo sapiens]
Length = 651
Score = 41.6 bits (96), Expect = 0.002
Identities = 42/207 (20%), Positives = 90/207 (43%), Gaps = 22/207 (10%)
Query: 269 KEDILESKSEQTKSKQRDTQERKREEKRKANRRKSKRMSK--YKENKSENKKTVPQKKMH 326
K+D +SK++ KS + D + + + K + +K K+ K K++K ++KK +K
Sbjct: 423 KKDKKDSKTDNKKSVKNDEESTDADSEPKGDSKKGKKDEKKGKKDSKKDDKKKDAKKNAE 482
Query: 327 KSVSSND-AYNFNLEEGVHLTPFRQKVSNDSNREENNESEVSLCESSGSG---------- 375
+ +D + + ++ + D+ R++ ++ ESS +G
Sbjct: 483 STEMESDLELKKDKKHSKEKKGSKKDIKKDA-RKDTESTDAEFDESSKTGFKTSTKIKGS 541
Query: 376 --DDSDDLYLPTC--KYIQNPTSNSDRPVTRPLAKRALKYTDEKETEGSKPTKTPTTTPP 431
+ + LY P K ++ ++++ + +KR + + +K T K K T P
Sbjct: 542 DTESEESLYKPGAKKKIDESDGTSANSKMEGLESKRGFRMSSKKTTFNEKGEKASTGRVP 601
Query: 432 ETQQSPHLSLKDITNVSLYPVVKIRRL 458
+++ P L + + P K+RRL
Sbjct: 602 PSREKPPLPACEPS----LPSPKVRRL 624
Score = 31.6 bits (70), Expect = 1.9
Identities = 41/173 (23%), Positives = 65/173 (37%), Gaps = 25/173 (14%)
Query: 275 SKSEQTKSKQRDTQERKREEKRKANRRKSKRMSKYKENKSENKKTVPQKKMHKSVSSN-- 332
S + +SKQ ++ KR+ + KS ++ + + +T P+ + K+VS N
Sbjct: 137 SYATNPESKQIVEEKTKRQNEADKTPLKSSHENEQSKKSKSSSETNPESQNSKTVSKNCS 196
Query: 333 -----DAYN--------FNLEEGVHLTPFRQKVSNDSNRE--ENNESEVSLCESSGSGDD 377
D+ N + + R K SND E N V G DD
Sbjct: 197 QKDKKDSKNSKKTNTEFLHTKNNPKKDLKRSKTSNDPISEICSENSLNVDFLMLVGQSDD 256
Query: 378 SD---DLYLPTCKYIQNPTSNSD---RPVTRPLAKRALKYTDEKETEGSKPTK 424
D +L Y QN + N T+ K+ K + + E+E SK K
Sbjct: 257 ESINFDAWLR--NYSQNNSKNYSLKYTKYTKKDTKKNAKKSSDAESEDSKDAK 307
>gi|117553580 adaptor-related protein complex 3, delta 1 subunit
isoform 2 [Homo sapiens]
Length = 1153
Score = 41.2 bits (95), Expect = 0.002
Identities = 21/67 (31%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Query: 252 QVNLSPKLIQPGTFTKTKEDILESKSEQTKSKQRDTQERKREEKRKANRRKSKRMSKYKE 311
+ + SP+ P K+K+ + K ++ K K+RD +++K +EK+K+ + K K+ K KE
Sbjct: 825 ETSKSPEKDVPMVEKKSKKP--KKKEKKHKEKERDKEKKKEKEKKKSPKPKKKKHRKEKE 882
Query: 312 NKSENKK 318
+++ KK
Sbjct: 883 ERTKGKK 889
Score = 38.1 bits (87), Expect = 0.020
Identities = 17/54 (31%), Positives = 32/54 (59%)
Query: 274 ESKSEQTKSKQRDTQERKREEKRKANRRKSKRMSKYKENKSENKKTVPQKKMHK 327
+SK + K K+ +ER +E+K++ ++KS + K K K + ++T +KK K
Sbjct: 840 KSKKPKKKEKKHKEKERDKEKKKEKEKKKSPKPKKKKHRKEKEERTKGKKKSKK 893
Score = 31.2 bits (69), Expect = 2.4
Identities = 41/198 (20%), Positives = 75/198 (37%), Gaps = 27/198 (13%)
Query: 252 QVNLSPKLIQPGTFTKTKEDILESKSEQTKSKQRDTQERKREEKRKANRRKSKRMSKYKE 311
Q++LS L PG + LE + + ++D + +KR+EK K +R+ +
Sbjct: 706 QIDLSVPLKVPGLPMSDQYVKLEEERRHRQKLEKDKRRKKRKEKEKKGKRRHSSLP---- 761
Query: 312 NKSENKKTVPQKKMHKSVSSNDAYNFNLEEGVHLTPFRQKVSNDSNREENNESEVSLCES 371
++ P +++ D + E + K ND R + + + L +S
Sbjct: 762 -TESDEDIAPAQQV-------DIVTEEMPENALPSDEDDKDPNDPYRALDIDLDKPLADS 813
Query: 372 SGSGDDSDDLYLPTCKYIQNPTSNS---DRPVTRPLAKRALKYT---DEKETEGSKPTKT 425
LP K+ TS S D P+ +K+ K EKE + K +
Sbjct: 814 E---------KLPIQKHRNTETSKSPEKDVPMVEKKSKKPKKKEKKHKEKERDKEKKKEK 864
Query: 426 PTTTPPETQQSPHLSLKD 443
P+ ++ H K+
Sbjct: 865 EKKKSPKPKKKKHRKEKE 882
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 41.2 bits (95), Expect = 0.002
Identities = 64/321 (19%), Positives = 113/321 (35%), Gaps = 46/321 (14%)
Query: 124 PNSD--DSSRNLFVKDLPQIPLEETELPGQGESFQIEDQIPTIPQDTLGVDFDSGEAKST 181
PN D D R V +L + LEE E QI++++ T L D + G + T
Sbjct: 53 PNPDILDHERKRRV-ELRCLELEEMMEEQGYEEQQIQEKVATFRLMLLEKDVNPGGKEET 111
Query: 182 DNVLPRTVSVRSSLKKHCNSICQFDSLDDFETSHLAGKSFEFERVGFLDPLVNMHIPENV 241
P + + + + S++ G SF+ P+
Sbjct: 112 PGQRPAVTETHQLAELNEKKNERLRAAFGISDSYVDGSSFD---------------PQRR 156
Query: 242 QHNACQWSKDQVNLSPKLIQPGTFTKTKEDILESKSEQTKSKQRDTQERKREEKRKANRR 301
A Q P P ++ +E + K++ ++R R + + RR
Sbjct: 157 AREAKQ---------PAPEPPKPYSLVRESSSSRSPTPKQKKKKKKKDRGRRSESSSPRR 207
Query: 302 KSKRMSKYKENKSENKKTVPQKKMHKSVSSNDAYNFNLEEGVHLTPFRQKVSNDSNREEN 361
+ K+ SK K+++SE++ +K+ H+S TP ++ S D R+ +
Sbjct: 208 ERKKSSKKKKHRSESES---KKRKHRSP----------------TPKSKRKSKDKKRKRS 248
Query: 362 NESEVSLCESSGSGDDSDDLYLPTCKYIQNPTSNSDRPVTRPLAKRALKYTDEKETEGSK 421
+ + S D + S + + T LA R+ + EG
Sbjct: 249 RSTTPAPKSRRAHRSTSADSASSSDTSRSRSRSAAAKTHTTALAGRSPSPASGRRGEGDA 308
Query: 422 PTKTPTTTPPETQQSPHLSLK 442
P P TT + SP + K
Sbjct: 309 PFSEPGTTSTQRPSSPETATK 329
Score = 30.8 bits (68), Expect = 3.2
Identities = 43/235 (18%), Positives = 84/235 (35%), Gaps = 31/235 (13%)
Query: 266 TKTKEDILESKSEQTKSK------QRDTQERKRE---------EKRKANRRKSKRMSKYK 310
+K K+ ES+S++ K + +R ++++KR+ + R+A+R S +
Sbjct: 213 SKKKKHRSESESKKRKHRSPTPKSKRKSKDKKRKRSRSTTPAPKSRRAHRSTSADSASSS 272
Query: 311 ENKSENKKTVPQKKMHKSVSSNDAYNFNLEEGVHLTPFRQKVSNDSNREENNESEVSLCE 370
+ ++ K +++ + G PF + + + R + E+
Sbjct: 273 DTSRSRSRSAAAKTHTTALAGRSPSPASGRRGEGDAPFSEPGTTSTQRPSSPETATKQPS 332
Query: 371 SSGSGDDSDDLYLPTCKYIQNPTSNSDRP---------------VTRPLAKRALKYTDEK 415
S D D + +P +S P +PLA L
Sbjct: 333 SPYEDKDKDKKEKSATRPSPSPERSSTGPEPPAPTPLLAERHGGSPQPLATTPLSQEPVN 392
Query: 416 ETEGSKPTKTPTTTPPETQQSPHLSLKDITNVSLYPVVKIRRLSLSPKKNKASPA 470
+ PT+ + P ++ P S + + S P R S SP+ K +PA
Sbjct: 393 PPSEASPTR-DRSPPKSPEKLPQSSSSESSPPSPQPTKVSRHASSSPESPKPAPA 446
>gi|102467235 inner centromere protein antigens 135/155kDa isoform 1
[Homo sapiens]
Length = 918
Score = 40.8 bits (94), Expect = 0.003
Identities = 25/136 (18%), Positives = 62/136 (45%), Gaps = 4/136 (2%)
Query: 272 ILESKSEQTKSKQRDTQERKREEKRKANRRKSKRMSKYKENKSENKKTVPQKKMHKSVSS 331
+ E + ++ + ++R QER+ +E+R+ RR+ +R +E + E ++ ++++ + +
Sbjct: 684 LAEQREQERREQERREQERREQERREQERREQERQLAEQERRREQERLQAERELQEREKA 743
Query: 332 NDAYNFNLEEGVHLTPFRQKVSNDSNREENNESEVSLCESSGSG---DDSDDLYLPTC-K 387
L+ + +++ + R+ E E E++G+ + + D+ P C
Sbjct: 744 LRLQKEQLQRELEEKKKKEEQQRLAERQLQEEQEKKAKEAAGASKALNVTVDVQSPACTS 803
Query: 388 YIQNPTSNSDRPVTRP 403
Y P + P P
Sbjct: 804 YQMTPQGHRAPPKINP 819
>gi|102467242 inner centromere protein antigens 135/155kDa isoform 2
[Homo sapiens]
Length = 914
Score = 40.8 bits (94), Expect = 0.003
Identities = 25/136 (18%), Positives = 62/136 (45%), Gaps = 4/136 (2%)
Query: 272 ILESKSEQTKSKQRDTQERKREEKRKANRRKSKRMSKYKENKSENKKTVPQKKMHKSVSS 331
+ E + ++ + ++R QER+ +E+R+ RR+ +R +E + E ++ ++++ + +
Sbjct: 680 LAEQREQERREQERREQERREQERREQERREQERQLAEQERRREQERLQAERELQEREKA 739
Query: 332 NDAYNFNLEEGVHLTPFRQKVSNDSNREENNESEVSLCESSGSG---DDSDDLYLPTC-K 387
L+ + +++ + R+ E E E++G+ + + D+ P C
Sbjct: 740 LRLQKEQLQRELEEKKKKEEQQRLAERQLQEEQEKKAKEAAGASKALNVTVDVQSPACTS 799
Query: 388 YIQNPTSNSDRPVTRP 403
Y P + P P
Sbjct: 800 YQMTPQGHRAPPKINP 815
>gi|239754909 PREDICTED: hypothetical protein [Homo sapiens]
Length = 245
Score = 40.4 bits (93), Expect = 0.004
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 254 NLSPKLIQPGTFTKTKEDILESKSEQTKSKQRDTQ---ERKREEKRKANRRKS-KRMSKY 309
++S QPG ++ +E E ++ + K+R+++ ER+ EKRK R K KR
Sbjct: 24 HISKPCTQPGWQSEIREREREIETRKEGKKERESERKKERREREKRKREREKERKRERGK 83
Query: 310 KENKSENKKTVPQKKMHKSVSSN 332
KE K E KK ++K + N
Sbjct: 84 KEKKGERKKEERERKKRRREKEN 106
Score = 40.4 bits (93), Expect = 0.004
Identities = 17/50 (34%), Positives = 31/50 (62%)
Query: 269 KEDILESKSEQTKSKQRDTQERKREEKRKANRRKSKRMSKYKENKSENKK 318
+E+ E + ++ K ++R+ +ERK+E +RK R + K K +E K E +K
Sbjct: 175 EEERKEKERKERKKRERNRKERKKERERKERRERKKERKKKEERKKERQK 224
Score = 38.9 bits (89), Expect = 0.012
Identities = 17/62 (27%), Positives = 36/62 (58%)
Query: 267 KTKEDILESKSEQTKSKQRDTQERKREEKRKANRRKSKRMSKYKENKSENKKTVPQKKMH 326
K +E E K E+ K ++R +ER++E +RK +++ ++ KE + + K+ +KK
Sbjct: 131 KERERKEERKREERKERERKKEEREKERERKERKKRERKQVGEKEEERKEKERKERKKRE 190
Query: 327 KS 328
++
Sbjct: 191 RN 192
Score = 38.1 bits (87), Expect = 0.020
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 276 KSEQTKSKQRDTQERKREEKRKANRRKSKRMSKYKENKSENKKTVPQKK 324
K E+ K K+R +ERK+ E+ + R+K + + +E K E KK +KK
Sbjct: 174 KEEERKEKER--KERKKRERNRKERKKERERKERRERKKERKKKEERKK 220
Score = 38.1 bits (87), Expect = 0.020
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 274 ESKSEQTKSKQRDTQERKREEKRKANRRKSKRMSKYKENKSENKKTVPQK 323
E + ++ + K+R +ER R+E++K RK +R K + K E +K QK
Sbjct: 175 EEERKEKERKERKKRERNRKERKKERERKERRERKKERKKKEERKKERQK 224
Score = 37.0 bits (84), Expect = 0.044
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 268 TKEDILESKSEQTKSKQRDTQERKREEKRKANRRKSKRMSKYKE--NKSENKKTVPQKKM 325
+KE + E+ K ++R +ERK+EE+ K RK ++ + K+ K E +K +K+
Sbjct: 127 SKEGKERERKEERKREERKERERKKEEREKERERKERKKRERKQVGEKEEERKEKERKER 186
Query: 326 HK 327
K
Sbjct: 187 KK 188
Score = 35.8 bits (81), Expect = 0.099
Identities = 17/61 (27%), Positives = 35/61 (57%)
Query: 267 KTKEDILESKSEQTKSKQRDTQERKREEKRKANRRKSKRMSKYKENKSENKKTVPQKKMH 326
K + + + K E+ K ++R+ +++++ +RK R+ K+ + KENK +K +KK
Sbjct: 61 KERREREKRKREREKERKRERGKKEKKGERKKEERERKKRRREKENKEGEEKEKRKKKEK 120
Query: 327 K 327
K
Sbjct: 121 K 121
Score = 34.3 bits (77), Expect = 0.29
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 8/69 (11%)
Query: 267 KTKEDILESKSEQTKSKQRDTQERK--------REEKRKANRRKSKRMSKYKENKSENKK 318
K +E E + ++ + K+R +ERK R+EK + R+K +R K ++ + E K+
Sbjct: 145 KERERKKEEREKERERKERKKRERKQVGEKEEERKEKERKERKKRERNRKERKKERERKE 204
Query: 319 TVPQKKMHK 327
+KK K
Sbjct: 205 RRERKKERK 213
Score = 33.5 bits (75), Expect = 0.49
Identities = 11/61 (18%), Positives = 35/61 (57%)
Query: 267 KTKEDILESKSEQTKSKQRDTQERKREEKRKANRRKSKRMSKYKENKSENKKTVPQKKMH 326
K +E + ++ + K+R+ +ERK+ E+++ ++ +R K ++ + + ++ ++K
Sbjct: 140 KREERKERERKKEEREKERERKERKKRERKQVGEKEEERKEKERKERKKRERNRKERKKE 199
Query: 327 K 327
+
Sbjct: 200 R 200
Score = 33.1 bits (74), Expect = 0.64
Identities = 15/61 (24%), Positives = 31/61 (50%)
Query: 267 KTKEDILESKSEQTKSKQRDTQERKREEKRKANRRKSKRMSKYKENKSENKKTVPQKKMH 326
+ KE+ K + K + ++ KR++K K R ++ + K +E K E K+ +++
Sbjct: 90 RKKEERERKKRRREKENKEGEEKEKRKKKEKKERGRTSKEGKERERKEERKREERKERER 149
Query: 327 K 327
K
Sbjct: 150 K 150
Score = 33.1 bits (74), Expect = 0.64
Identities = 25/104 (24%), Positives = 45/104 (43%), Gaps = 6/104 (5%)
Query: 267 KTKEDILESKSEQTKSKQR-----DTQERKREEKRKANRRKSKRMSKYKENKSENKKTVP 321
+ KE + K ++ + K+R + +ER+R+E+RK RK +R K +E + E ++
Sbjct: 105 ENKEGEEKEKRKKKEKKERGRTSKEGKERERKEERKREERK-ERERKKEEREKERERKER 163
Query: 322 QKKMHKSVSSNDAYNFNLEEGVHLTPFRQKVSNDSNREENNESE 365
+K+ K V + E R + RE E
Sbjct: 164 KKRERKQVGEKEEERKEKERKERKKRERNRKERKKERERKERRE 207
Score = 33.1 bits (74), Expect = 0.64
Identities = 15/68 (22%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 267 KTKEDILESKSEQTKSKQRDTQERKREEKRKANR-RKSKRMSKYKENKSENKKTVPQKKM 325
+ +++ + + +Q K+ + +E++R+E++K R RK ++ + ++ + E KK +K+
Sbjct: 158 RERKERKKRERKQVGEKEEERKEKERKERKKRERNRKERKKERERKERRERKKERKKKEE 217
Query: 326 HKSVSSND 333
K D
Sbjct: 218 RKKERQKD 225
Score = 32.0 bits (71), Expect = 1.4
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 10/69 (14%)
Query: 269 KEDILESKSEQTKSK---QRDTQERKREEKR-------KANRRKSKRMSKYKENKSENKK 318
KE E +SE+ K + ++ +ER++E KR K R+K +R K + + ENK+
Sbjct: 49 KEGKKERESERKKERREREKRKREREKERKRERGKKEKKGERKKEERERKKRRREKENKE 108
Query: 319 TVPQKKMHK 327
++K K
Sbjct: 109 GEEKEKRKK 117
Score = 31.2 bits (69), Expect = 2.4
Identities = 21/104 (20%), Positives = 43/104 (41%), Gaps = 1/104 (0%)
Query: 278 EQTKSKQRDTQERKREEKRKAN-RRKSKRMSKYKENKSENKKTVPQKKMHKSVSSNDAYN 336
E+ + ++R +E+K E K++ R+K +R + KE + + K+ +KK S
Sbjct: 74 EKERKRERGKKEKKGERKKEERERKKRRREKENKEGEEKEKRKKKEKKERGRTSKEGKER 133
Query: 337 FNLEEGVHLTPFRQKVSNDSNREENNESEVSLCESSGSGDDSDD 380
EE ++ + +E E E G+ ++
Sbjct: 134 ERKEERKREERKERERKKEEREKERERKERKKRERKQVGEKEEE 177
Score = 31.2 bits (69), Expect = 2.4
Identities = 17/59 (28%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
Query: 267 KTKEDILESKSEQTKSKQRDTQ-ERKREEKRKANRRKSKRMSKYKENKSENKKTVPQKK 324
K + + E K E+ + ++R+ + ERK++E+RK R+K R + ++E + ++ +KK
Sbjct: 188 KRERNRKERKKERERKERRERKKERKKKEERKKERQKD-RQTNWREKERGKRERKERKK 245
Score = 29.3 bits (64), Expect = 9.3
Identities = 15/64 (23%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 263 GTFTKTKEDILESKSEQTKSKQRDTQERKREEKRKANR--RKSKRMSKYKENKSENKKTV 320
G K + + + + E+ + + ++RK++EK++ R ++ K + +E K E +K
Sbjct: 88 GERKKEERERKKRRREKENKEGEEKEKRKKKEKKERGRTSKEGKERERKEERKREERKER 147
Query: 321 PQKK 324
+KK
Sbjct: 148 ERKK 151
>gi|239749449 PREDICTED: hypothetical protein [Homo sapiens]
Length = 275
Score = 40.4 bits (93), Expect = 0.004
Identities = 17/43 (39%), Positives = 26/43 (60%)
Query: 276 KSEQTKSKQRDTQERKREEKRKANRRKSKRMSKYKENKSENKK 318
K E+ K ++R+ +ERK+E +RK R + K K + K E KK
Sbjct: 165 KEEREKKRERNRKERKKERERKERRERKKERKKERRKKKERKK 207
Score = 39.7 bits (91), Expect = 0.007
Identities = 18/64 (28%), Positives = 34/64 (53%)
Query: 274 ESKSEQTKSKQRDTQERKREEKRKANRRKSKRMSKYKENKSENKKTVPQKKMHKSVSSND 333
E K ++ K ++R+ + + ++RK R + +R + KE K E +K +KK K+ D
Sbjct: 157 ERKRKKRKKEEREKKRERNRKERKKERERKERRERKKERKKERRKKKERKKDRKTDRQTD 216
Query: 334 AYNF 337
+ F
Sbjct: 217 SQVF 220
Score = 38.9 bits (89), Expect = 0.012
Identities = 17/58 (29%), Positives = 35/58 (60%)
Query: 267 KTKEDILESKSEQTKSKQRDTQERKREEKRKANRRKSKRMSKYKENKSENKKTVPQKK 324
K KE + K + K +++ +E+K+ E+++ RR+ K+ + KE + ENK+ +K+
Sbjct: 78 KRKEREKQRKERREKERRKRKKEKKKRERKQRGRRERKKKKERKERERENKQRRERKR 135
Score = 38.9 bits (89), Expect = 0.012
Identities = 17/61 (27%), Positives = 35/61 (57%)
Query: 267 KTKEDILESKSEQTKSKQRDTQERKREEKRKANRRKSKRMSKYKENKSENKKTVPQKKMH 326
K +E + E+ K K+R +ER+ +++R+ R+K ++ + KE K E ++ ++K
Sbjct: 102 KKRERKQRGRRERKKKKERKERERENKQRRERKRKKRRKKKRRKERKREKERGKRERKRK 161
Query: 327 K 327
K
Sbjct: 162 K 162
Score = 38.5 bits (88), Expect = 0.015
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 269 KEDILESKSEQTKSKQRDTQERK--REEKRKANRRKSKRMSKYKENKSENKKTVPQKKMH 326
KE K E+ K ++R +ER+ R+E+R+ RRK K+ K +E K ++ +KK
Sbjct: 61 KEKKKRKKRERGKERERKRKEREKQRKERREKERRKRKKEKKKRERKQRGRRERKKKKER 120
Query: 327 K 327
K
Sbjct: 121 K 121
Score = 37.0 bits (84), Expect = 0.044
Identities = 17/65 (26%), Positives = 31/65 (47%)
Query: 269 KEDILESKSEQTKSKQRDTQERKREEKRKANRRKSKRMSKYKENKSENKKTVPQKKMHKS 328
K + K E+ + K++ + K+ E+ + R+K + + +E K E KK +KK K
Sbjct: 148 KREKERGKRERKRKKRKKEEREKKRERNRKERKKERERKERRERKKERKKERRKKKERKK 207
Query: 329 VSSND 333
D
Sbjct: 208 DRKTD 212
Score = 36.6 bits (83), Expect = 0.058
Identities = 16/54 (29%), Positives = 32/54 (59%)
Query: 274 ESKSEQTKSKQRDTQERKREEKRKANRRKSKRMSKYKENKSENKKTVPQKKMHK 327
+ + ++ + KQR +ERK++++RK R++K+ + K K KK ++K K
Sbjct: 98 KKEKKKRERKQRGRRERKKKKERKERERENKQRRERKRKKRRKKKRRKERKREK 151
Score = 36.6 bits (83), Expect = 0.058
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 276 KSEQTKSKQRDTQERKREEKRKANRRKSKRMSKYKENKSENKKTVPQKK 324
K ++ K ++R+ + KRE KRK R+K +R K + N+ E KK +K+
Sbjct: 140 KKKRRKERKREKERGKRERKRK-KRKKEEREKKRERNRKERKKERERKE 187
Score = 36.6 bits (83), Expect = 0.058
Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Query: 267 KTKEDILESKSEQTKSKQRDTQERKREEKRKANRRKSKRMSKYKENKSENK 317
K K++ E K E+ + +++ +ERK +RK R+K +R K KE K + K
Sbjct: 162 KRKKEEREKKRERNRKERKKERERKERRERKKERKKERR--KKKERKKDRK 210
Score = 36.2 bits (82), Expect = 0.076
Identities = 18/59 (30%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 274 ESKSEQTKSKQRDTQERKREEKRKANRRKSKRMSKYKENKSENKKTVPQKKMHKSVSSN 332
E K + ++KQR +ERKR+++RK RRK ++ K + + +K +++ K N
Sbjct: 119 ERKERERENKQR--RERKRKKRRKKKRRKERKREKERGKRERKRKKRKKEEREKKRERN 175
Score = 34.3 bits (77), Expect = 0.29
Identities = 11/54 (20%), Positives = 35/54 (64%)
Query: 274 ESKSEQTKSKQRDTQERKREEKRKANRRKSKRMSKYKENKSENKKTVPQKKMHK 327
E + ++ + ++++ ++RK+E+K++ +++ +R K K+ + E ++ Q++ K
Sbjct: 81 EREKQRKERREKERRKRKKEKKKRERKQRGRRERKKKKERKERERENKQRRERK 134
Score = 33.5 bits (75), Expect = 0.49
Identities = 17/59 (28%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 266 TKTKEDILESKSEQTKSKQRDTQERKREEKRKANRRKSKRMSKYKENKSENKKTVPQKK 324
T+ + + + + E+ K K+ +ERKRE +K +++ KR + KE + + K+ Q+K
Sbjct: 30 TQRESERKKERREREKRKREREKERKRERGKKEKKKRKKR-ERGKERERKRKEREKQRK 87
Score = 33.5 bits (75), Expect = 0.49
Identities = 15/59 (25%), Positives = 31/59 (52%)
Query: 269 KEDILESKSEQTKSKQRDTQERKREEKRKANRRKSKRMSKYKENKSENKKTVPQKKMHK 327
KE + K + + K+R +ER++ +K K R + +R + ++ K E K+ + K +
Sbjct: 73 KERERKRKEREKQRKERREKERRKRKKEKKKRERKQRGRRERKKKKERKERERENKQRR 131
Score = 33.1 bits (74), Expect = 0.64
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 269 KEDILESKSE-QTKSKQRDTQERKREEKRKANRRKSKRMSKYKENKSENKKTVPQKKMHK 327
KE E+K + K K+R ++R++E KR+ R K +R K ++ + KK +K K
Sbjct: 121 KERERENKQRRERKRKKRRKKKRRKERKREKERGKRERKRKKRKKEEREKKRERNRKERK 180
Score = 32.7 bits (73), Expect = 0.84
Identities = 11/52 (21%), Positives = 30/52 (57%)
Query: 276 KSEQTKSKQRDTQERKREEKRKANRRKSKRMSKYKENKSENKKTVPQKKMHK 327
+ ++ + +++ +ER++E KR+ +++ K+ K + K +K ++K K
Sbjct: 36 RKKERREREKRKREREKERKRERGKKEKKKRKKRERGKERERKRKEREKQRK 87
Score = 32.3 bits (72), Expect = 1.1
Identities = 14/61 (22%), Positives = 34/61 (55%)
Query: 267 KTKEDILESKSEQTKSKQRDTQERKREEKRKANRRKSKRMSKYKENKSENKKTVPQKKMH 326
+ +E E K E+ K +++ ++R+R ++R+ R++ ++ K + K K+ +KK
Sbjct: 46 RKREREKERKRERGKKEKKKRKKRERGKERERKRKEREKQRKERREKERRKRKKEKKKRE 105
Query: 327 K 327
+
Sbjct: 106 R 106
Score = 32.0 bits (71), Expect = 1.4
Identities = 13/61 (21%), Positives = 32/61 (52%)
Query: 267 KTKEDILESKSEQTKSKQRDTQERKREEKRKANRRKSKRMSKYKENKSENKKTVPQKKMH 326
+ KE K ++ + K+R + K+E+K++ R + K + ++ + + +K +K+
Sbjct: 36 RKKERREREKRKREREKERKRERGKKEKKKRKKRERGKERERKRKEREKQRKERREKERR 95
Query: 327 K 327
K
Sbjct: 96 K 96
Score = 31.2 bits (69), Expect = 2.4
Identities = 23/94 (24%), Positives = 40/94 (42%), Gaps = 7/94 (7%)
Query: 276 KSEQTKSKQRDTQERKREEKRK------ANRRKSKRMSKYKENKSENKKTVPQKKMHKSV 329
K E+ K K+R+ + ++RE KRK RR+ +R + KE K +K +++ K
Sbjct: 60 KKEKKKRKKRE-RGKERERKRKEREKQRKERREKERRKRKKEKKKRERKQRGRRERKKKK 118
Query: 330 SSNDAYNFNLEEGVHLTPFRQKVSNDSNREENNE 363
+ N + R+K R+ E
Sbjct: 119 ERKERERENKQRRERKRKKRRKKKRRKERKREKE 152
Score = 31.2 bits (69), Expect = 2.4
Identities = 13/61 (21%), Positives = 31/61 (50%)
Query: 267 KTKEDILESKSEQTKSKQRDTQERKREEKRKANRRKSKRMSKYKENKSENKKTVPQKKMH 326
K + + K ++ K K+ Q +RE K+K R++ +R +K + + K+ +++
Sbjct: 87 KERREKERRKRKKEKKKRERKQRGRRERKKKKERKERERENKQRRERKRKKRRKKKRRKE 146
Query: 327 K 327
+
Sbjct: 147 R 147
Score = 31.2 bits (69), Expect = 2.4
Identities = 12/52 (23%), Positives = 30/52 (57%)
Query: 267 KTKEDILESKSEQTKSKQRDTQERKREEKRKANRRKSKRMSKYKENKSENKK 318
K +++ ++ + K++ +++KR ++RK + + KR K K+ K E ++
Sbjct: 118 KERKERERENKQRRERKRKKRRKKKRRKERKREKERGKRERKRKKRKKEERE 169
Score = 30.4 bits (67), Expect = 4.2
Identities = 12/52 (23%), Positives = 28/52 (53%)
Query: 267 KTKEDILESKSEQTKSKQRDTQERKREEKRKANRRKSKRMSKYKENKSENKK 318
+ KE + ++ + +++ +ERK E+ RR+ KR + K+ + + +K
Sbjct: 97 RKKEKKKRERKQRGRRERKKKKERKERERENKQRRERKRKKRRKKKRRKERK 148
>gi|134948605 ankyrin repeat domain 12 isoform 2 [Homo sapiens]
Length = 2039
Score = 40.4 bits (93), Expect = 0.004
Identities = 48/260 (18%), Positives = 99/260 (38%), Gaps = 21/260 (8%)
Query: 267 KTKEDILESKSEQTKSKQRDTQERKREEKRKANRRKSKRMSKYKENKSENKKTVPQKKMH 326
K++E + ++ K+R E K + + ++S K K +NK+ +++
Sbjct: 879 KSREKMDRKHDKEKPEKERHLAESKEKHLMEKKNKQSDNSEYSKSEKGKNKE--KDRELD 936
Query: 327 KSVSSNDAYNFNLEEGVHLTPFRQKVSNDSNREENNESEVSLCESSGSGDDSDDLYLPTC 386
K S D + N+ H+ ++ D N+ + +E +SL E + + L P
Sbjct: 937 KKEKSRDKESINITNSKHIQEEKKSSIVDGNKAQ-HEKPLSLKEKT----KDEPLKTPDG 991
Query: 387 KYIQNPTSNSDRPVTRPLAKRALKYTD----EKETEGSKPTKTPTTTPPETQQSPHLSLK 442
K + DR R K ++ + E + KP +P + ++ L
Sbjct: 992 KEKDKKDKDIDRYKERDKHKDKIQINSLLKLKSEADKPKPKSSPASKDTRPKEK-RLVND 1050
Query: 443 DITNVSLYPVVKIRRLSLSPKKNKASPAVALPKRRCTASVNYKEPTLASKLRRGDPFTDL 502
D+ S ++ ++ L + K + ++ + N E + K +
Sbjct: 1051 DLMQTSFERMLSLKDLEIEQWHKKHKEKIKQKEKERLRNRNCLELKIKDKEKT------- 1103
Query: 503 CFLNSPIFKQKKDLRRSKKS 522
++P + K+L RSK S
Sbjct: 1104 --KHTPTESKNKELTRSKSS 1121
Score = 30.4 bits (67), Expect = 4.2
Identities = 23/99 (23%), Positives = 42/99 (42%)
Query: 267 KTKEDILESKSEQTKSKQRDTQERKREEKRKANRRKSKRMSKYKENKSENKKTVPQKKMH 326
K KE I + + E+ +++ + K +EK K +SK + SE ++K
Sbjct: 1074 KHKEKIKQKEKERLRNRNCLELKIKDKEKTKHTPTESKNKELTRSKSSEVTDAYTKEKQP 1133
Query: 327 KSVSSNDAYNFNLEEGVHLTPFRQKVSNDSNREENNESE 365
K SN + + + + + L N NR +E+E
Sbjct: 1134 KDAVSNRSQSVDTKNVMTLGKSSFVSDNSLNRSPRSENE 1172
>gi|134948558 ankyrin repeat domain 12 isoform 1 [Homo sapiens]
Length = 2062
Score = 40.4 bits (93), Expect = 0.004
Identities = 48/260 (18%), Positives = 99/260 (38%), Gaps = 21/260 (8%)
Query: 267 KTKEDILESKSEQTKSKQRDTQERKREEKRKANRRKSKRMSKYKENKSENKKTVPQKKMH 326
K++E + ++ K+R E K + + ++S K K +NK+ +++
Sbjct: 902 KSREKMDRKHDKEKPEKERHLAESKEKHLMEKKNKQSDNSEYSKSEKGKNKE--KDRELD 959
Query: 327 KSVSSNDAYNFNLEEGVHLTPFRQKVSNDSNREENNESEVSLCESSGSGDDSDDLYLPTC 386
K S D + N+ H+ ++ D N+ + +E +SL E + + L P
Sbjct: 960 KKEKSRDKESINITNSKHIQEEKKSSIVDGNKAQ-HEKPLSLKEKT----KDEPLKTPDG 1014
Query: 387 KYIQNPTSNSDRPVTRPLAKRALKYTD----EKETEGSKPTKTPTTTPPETQQSPHLSLK 442
K + DR R K ++ + E + KP +P + ++ L
Sbjct: 1015 KEKDKKDKDIDRYKERDKHKDKIQINSLLKLKSEADKPKPKSSPASKDTRPKEK-RLVND 1073
Query: 443 DITNVSLYPVVKIRRLSLSPKKNKASPAVALPKRRCTASVNYKEPTLASKLRRGDPFTDL 502
D+ S ++ ++ L + K + ++ + N E + K +
Sbjct: 1074 DLMQTSFERMLSLKDLEIEQWHKKHKEKIKQKEKERLRNRNCLELKIKDKEKT------- 1126
Query: 503 CFLNSPIFKQKKDLRRSKKS 522
++P + K+L RSK S
Sbjct: 1127 --KHTPTESKNKELTRSKSS 1144
Score = 30.4 bits (67), Expect = 4.2
Identities = 23/99 (23%), Positives = 42/99 (42%)
Query: 267 KTKEDILESKSEQTKSKQRDTQERKREEKRKANRRKSKRMSKYKENKSENKKTVPQKKMH 326
K KE I + + E+ +++ + K +EK K +SK + SE ++K
Sbjct: 1097 KHKEKIKQKEKERLRNRNCLELKIKDKEKTKHTPTESKNKELTRSKSSEVTDAYTKEKQP 1156
Query: 327 KSVSSNDAYNFNLEEGVHLTPFRQKVSNDSNREENNESE 365
K SN + + + + + L N NR +E+E
Sbjct: 1157 KDAVSNRSQSVDTKNVMTLGKSSFVSDNSLNRSPRSENE 1195
>gi|190194412 thyroid hormone receptor interactor 11 [Homo sapiens]
Length = 1979
Score = 40.0 bits (92), Expect = 0.005
Identities = 84/451 (18%), Positives = 181/451 (40%), Gaps = 48/451 (10%)
Query: 7 LKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDNNKMLVL 66
L+++ D+ +I + ++ +LAE + + +++ +LL ++ +M +L
Sbjct: 390 LQQALSDAENEIMRLSSLNQDNSLAEDNLK---LKMRIEVLEKEKSLLSQEKEELQMSLL 446
Query: 67 ALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSSGMDPNS 126
L NE +K + L E + L L A + +L + + EI +D +
Sbjct: 447 KLNNEYEVIKSTATRDISLDSELHDLRLNLEAKEQELNQSISEKETLIAEI--EELDRQN 504
Query: 127 DDSSRNLF-VKDLPQIPLEETELPGQGESFQIEDQIPTIPQDTLGVDFDSGEAKSTDNVL 185
++++++ +KD Q+ ++ E G+S I + QD + E K +
Sbjct: 505 QEATKHMILIKD--QLSKQQNE----GDSI-----ISKLKQDL------NDEKKRVHQLE 547
Query: 186 PRTVSVRSSLKKHCNSICQFD-SLDDFETSHLAGKSFEFERVGFLDPLVNMHIPENVQHN 244
+ + L + Q + +L+D HL + E + +D L Q +
Sbjct: 548 DDKMDITKELDVQKEKLIQSEVALNDL---HLTKQKLEDKVENLVDQL------NKSQES 598
Query: 245 ACQWSKDQVNLSPKLIQ-PGTFTKTKEDILESKSEQTKSKQRDTQERKREEKRKANRRKS 303
K+ + L + Q ++ + ++++S ++ + S +DT ++RE + + ++
Sbjct: 599 NVSIQKENLELKEHIRQNEEELSRIRNELMQSLNQDSNSNFKDTLLKEREAEVRNLKQNL 658
Query: 304 KRMSKYKENKSENKKTVPQKKM--HKSVSSNDAYNFNLEE---GVHLTPFRQKVSNDSNR 358
+ + EN KK KM K V + + LEE G + + ++ +
Sbjct: 659 SELEQLNENL---KKVAFDVKMENEKLVLACEDVRHQLEECLAGNNQLSLEKNTIVETLK 715
Query: 359 EENNESEVSLCESSGSGDDSDDLYLPTCKYIQNPTSNSDRPVTRPLAKRALKYTDEKETE 418
E E E LC + + + Y T + + N N + + + +K +K+ E
Sbjct: 716 MEKGEIEAELCWAKKRLLEEANKYEKTIEELSN-ARNLNTSALQLEHEHLIKLNQKKDME 774
Query: 419 GSKPTKTPTTTPPETQQSPHLSLKDITNVSL 449
++ K E + H KD+ + SL
Sbjct: 775 IAELKKN-----IEQMDTDHKETKDVLSSSL 800
>gi|21361684 G patch domain containing 1 [Homo sapiens]
Length = 931
Score = 40.0 bits (92), Expect = 0.005
Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 6/97 (6%)
Query: 251 DQVNLSPKLIQPGTFTKTKEDILESKSEQTKSKQRDTQERKREEKRKANRRKSKRMSKYK 310
++ P+L P F LE ++ K +D + K+E +RK ++K R K+K
Sbjct: 826 EREEFGPRL--PPVFCPNARQTLEVPQKEKHKKNKDKHKAKKEHRRKKEKKKKHRKHKHK 883
Query: 311 ENKSENKKTVPQKKMHKSVSSNDAYNFNLEEGVHLTP 347
K +NKK +K S SS+ + + + EE ++P
Sbjct: 884 -GKQKNKK---PEKSSSSESSDSSDSQSDEETADVSP 916
>gi|27734775 hypothetical protein LOC286499 [Homo sapiens]
Length = 248
Score = 40.0 bits (92), Expect = 0.005
Identities = 46/205 (22%), Positives = 79/205 (38%), Gaps = 20/205 (9%)
Query: 293 EEKRKANRRK--SKRMSKYKENKSENKKTVPQKKMHKSVSSNDAYNFNLEEGVHLTPFRQ 350
E K++ +K SK +++++E +EN K +K K +S N++ + E ++
Sbjct: 43 EVKKQLENKKTGSKALAEFEEKMNENWKKELEKSREKLLSGNESSSKKRER-------KK 95
Query: 351 KVSNDSNREENNESEVSLCESSGSGDDSDDLYLPTCKYIQNPTSNSDRPVTRPLAKRALK 410
K S R ++ S +SS S DS+D K + + S K +
Sbjct: 96 KRKKKSCRSSSSSSS---SDSSSSSSDSEDEEKKQGKRRKKKKNRS--------YKSSQS 144
Query: 411 YTDEKETEGSKPTKTPTTTPPETQQSPHLSLKDITNVSLYPVVKIRRLSLSPKKNKASPA 470
T E E+E + K + ET++ + YP K S + +
Sbjct: 145 STHESESESKESVKKKKKSKDETEKEKDVRSLSKKRKKSYPDDKPLSSESSSESDYEEDV 204
Query: 471 VALPKRRCTASVNYKEPTLASKLRR 495
A KRRC KE K ++
Sbjct: 205 QAKKKRRCEEREQAKEKVKKKKKKQ 229
Score = 40.0 bits (92), Expect = 0.005
Identities = 27/108 (25%), Positives = 54/108 (50%), Gaps = 8/108 (7%)
Query: 267 KTKEDILESKSEQTKSKQRDTQERKREEKRKANRRKSKRMSKYK-------ENKSENKKT 319
+ K+ S S + + + + EEK++ RRK K+ YK E++SE+K++
Sbjct: 97 RKKKSCRSSSSSSSSDSSSSSSDSEDEEKKQGKRRKKKKNRSYKSSQSSTHESESESKES 156
Query: 320 VPQKKMHKSVSSNDAYNFNLEEGVHLT-PFRQKVSNDSNREENNESEV 366
V +KK K + + +L + + P + +S++S+ E + E +V
Sbjct: 157 VKKKKKSKDETEKEKDVRSLSKKRKKSYPDDKPLSSESSSESDYEEDV 204
Score = 33.1 bits (74), Expect = 0.64
Identities = 26/117 (22%), Positives = 50/117 (42%), Gaps = 4/117 (3%)
Query: 267 KTKEDILESKSEQTKSKQRDTQERKREEKRKANRRKSKRMSKYKENKSEN-KKTVPQKKM 325
KT L E+ + E+ RE+ N SK+ + K+ K ++ + +
Sbjct: 52 KTGSKALAEFEEKMNENWKKELEKSREKLLSGNESSSKKRERKKKRKKKSCRSSSSSSSS 111
Query: 326 HKSVSSNDAYNFNLEEGVHLTPFRQ---KVSNDSNREENNESEVSLCESSGSGDDSD 379
S SS+D+ + ++G + K S S E +ES+ S+ + S D+++
Sbjct: 112 DSSSSSSDSEDEEKKQGKRRKKKKNRSYKSSQSSTHESESESKESVKKKKKSKDETE 168
Score = 31.2 bits (69), Expect = 2.4
Identities = 25/118 (21%), Positives = 52/118 (44%), Gaps = 9/118 (7%)
Query: 269 KEDILESKSEQTKSKQRDTQERKREEKRKANRRKSKRMSKYKENKS-------ENKKTVP 321
K+++ +S+ + + +++R+R++KRK +S S ++ S E KK
Sbjct: 70 KKELEKSREKLLSGNESSSKKRERKKKRKKKSCRSSSSSSSSDSSSSSSDSEDEEKKQGK 129
Query: 322 --QKKMHKSVSSNDAYNFNLEEGVHLTPFRQKVSNDSNREENNESEVSLCESSGSGDD 377
+KK ++S S+ + E + ++K S D +E + +S DD
Sbjct: 130 RRKKKKNRSYKSSQSSTHESESESKESVKKKKKSKDETEKEKDVRSLSKKRKKSYPDD 187
Score = 31.2 bits (69), Expect = 2.4
Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
Query: 250 KDQVNLSPKLIQPGTFTKTKEDILESKSEQTKSKQRDTQERKREEKRKANRRKSKRMSKY 309
KD +LS K + ++ K ES SE + ++++R E+R+ + K K+ K
Sbjct: 171 KDVRSLSKK--RKKSYPDDKPLSSESSSESDYEEDVQAKKKRRCEEREQAKEKVKKKKKK 228
Query: 310 KENKSENKKTVPQKKMHKS 328
+ K KK HKS
Sbjct: 229 QHKKHSKKKKKKSGSSHKS 247
>gi|87299628 biorientation of chromosomes in cell division 1-like
[Homo sapiens]
Length = 3051
Score = 39.7 bits (91), Expect = 0.007
Identities = 47/208 (22%), Positives = 79/208 (37%), Gaps = 20/208 (9%)
Query: 270 EDILESKSEQTKSKQRDTQERKREEKRKANRRKSKRMSKYKENKSENKKTVPQK-KMHKS 328
+D+ + SEQ K+K D E+K + K R+K K+ K+ K QK K K
Sbjct: 305 KDVQQESSEQ-KNKSTDKGEKKPDSNEKGERKKEKKEKTEKKFDHSKKSEDTQKVKDEKQ 363
Query: 329 VSSNDAYNFNLEEGVHLTPFRQKVSNDSNREENNESEVSLCESSGSG-DDSDDLYLPTCK 387
+ + L +K SN + E + + SL +S G D + T
Sbjct: 364 AKEKEVESLKLPS--------EKNSNKAKTVEGTKEDFSLIDSDVDGLTDITVSSVHTSD 415
Query: 388 YIQNPTSNSDRPVTRPLAKRALKYTDEKETEGSKPTKTPTTTPPETQ---------QSPH 438
+ VT + +D++E TKT T+ E + P+
Sbjct: 416 LSSFEEDTEEEVVTSDSMEEGEITSDDEEKNKQNKTKTQTSDSSEGKTKSVRHAYVHKPY 475
Query: 439 LSLKDITNVSLYPVVKIRRLSLSPKKNK 466
L K ++ V+ RR S++ +K +
Sbjct: 476 LYSKYYSDSDDELTVEQRRQSIAKEKEE 503
Score = 31.2 bits (69), Expect = 2.4
Identities = 59/273 (21%), Positives = 106/273 (38%), Gaps = 22/273 (8%)
Query: 268 TKEDILESKSEQTKSKQRDTQERKREEKRKANRRKSKRMSKYKENKSENKKTVPQKKMHK 327
T +D ++K +TK++ D+ E K + R A K SKY + S+++ TV Q++
Sbjct: 439 TSDDEEKNKQNKTKTQTSDSSEGKTKSVRHAYVHKPYLYSKYYSD-SDDELTVEQRRQSI 497
Query: 328 SVSSNDAY---NFNLEEGVHLTPFRQKVSNDSNREENNESEVSLCESSGSGDDSDDL--- 381
+ + N E+ + + + S + S V L ESS +
Sbjct: 498 AKEKEERLLRRQINREKLEEKRKQKAEKTKSSKTKGQGRSSVDLEESSTKSLEPKAARIK 557
Query: 382 -YLPTCKYIQNPTSNSDRPVTRPLAKRALKYTDEKETEGSKPTKTPTTTPPETQQSPHLS 440
L K ++ + S + R R ++ +K+ + + +K T ++ S
Sbjct: 558 EVLKERKVLEKKVALSKK---RKKDSRNVEENSKKKQQYEEDSKETLKTSEHCEKEKISS 614
Query: 441 LKDITNV--SLYPVVKIRRLSLS----PKKNKASPAVALPKRRCTASV---NYKEPTLAS 491
K++ +V P RRLS S + S KRR + V +E T
Sbjct: 615 SKELKHVHAKSEPSKPARRLSESLHVVDENKNESKLEREHKRRTSTPVIMEGVQEETDTR 674
Query: 492 KLRRGDPFTDLCFLNSPIFKQKKDLRRSKKSMK 524
++R +++C KQK L+ K K
Sbjct: 675 DVKRQVERSEIC--TEEPQKQKSTLKNEKHLKK 705
Score = 30.8 bits (68), Expect = 3.2
Identities = 29/175 (16%), Positives = 68/175 (38%), Gaps = 16/175 (9%)
Query: 250 KDQVNLSPKLIQPGTFTKTKEDILESKSEQTKSKQRDTQERKREEKRKANRRKSKRMSKY 309
KD N+ + + + ++ L++ K K ++E K + + ++R+S+
Sbjct: 578 KDSRNVEENSKKKQQYEEDSKETLKTSEHCEKEKISSSKELKHVHAKSEPSKPARRLSES 637
Query: 310 KENKSENKKTVPQKKMHKSVSSNDAYNFNLEEGVHLTPFRQKVSNDSNREENNESEVSLC 369
ENK ++ HK +S ++E +++V E + + S
Sbjct: 638 LHVVDENKNESKLEREHKRRTSTPVIMEGVQEETDTRDVKRQVERSEICTEEPQKQKSTL 697
Query: 370 ESSGSGDDSDDLYLPTCKYIQNPTSNSDRPVTRPLAKRALKYTDEKETEGSKPTK 424
++ K+++ +S+ P + L K+ +K + EK P++
Sbjct: 698 KNE--------------KHLKK--DDSETPHLKSLLKKEVKSSKEKPEREKTPSE 736
Score = 30.4 bits (67), Expect = 4.2
Identities = 61/297 (20%), Positives = 104/297 (35%), Gaps = 57/297 (19%)
Query: 270 EDILESKSEQTKSKQRDTQERK----REEKRKANRRKSKRMSKY---------KENKSEN 316
E+ ++ +S+QTK D ERK E K + K +S+Y KEN +
Sbjct: 769 EENIQKQSQQTKLSSDDKTERKSKHRNERKLSVLGKDGKPVSEYIIKTDENVRKENNKKE 828
Query: 317 KKTVPQKKM--HKSVSSNDAYNFNLEEGVHLTPFRQKVSNDSNREENNESEVSLCESSGS 374
++ +K HKS S+D+ K+ DS + + + S S
Sbjct: 829 RRLSAEKTKAEHKSRRSSDS----------------KIQKDSLGSKQHGITLQRRSESYS 872
Query: 375 GDDSD-DLYLPTCKYIQNPTSNSDRPVTRPLAKRALKYTDEKETEGSK-----------P 422
D D D + ++ T+ L + L + +T+G +
Sbjct: 873 EDKCDMDSTNMDSNLKPEEVVHKEKRRTKSLLEEKLVLKSKSKTQGKQVKVVETELQEGA 932
Query: 423 TKTPTTTPP-----------ETQQSPHLSLKDITNVSLYPVVKIRRLSLSPKKNKASPAV 471
TK TT P E Q+ + K + PV++ S + +S
Sbjct: 933 TKQATTPKPDKEKNTEENDSEKQRKSKVEDKPFEETGVEPVLETASSSAHSTQKDSSHRA 992
Query: 472 ALP--KRRCTASVNYKEPTLASKLRRGDPFTDLCFLNSPIFKQKKDLRRSKKSMKQI 526
LP K + + + L KL G L + I K+K + + K K++
Sbjct: 993 KLPLAKEKYKSDKDSTSTRLERKLSDGHKSRSLKHSSKDI-KKKDENKSDDKDGKEV 1048
>gi|118600973 RNA binding motif protein, X-linked 2 [Homo sapiens]
Length = 322
Score = 39.7 bits (91), Expect = 0.007
Identities = 38/167 (22%), Positives = 71/167 (42%), Gaps = 24/167 (14%)
Query: 207 SLDDFETSHLAGKSFEFERVGFLDPLVNMHIPENVQHNACQWSKDQVNLSPKLIQPGTFT 266
++D+F + G++ + V N P++ S++ +++ +L + G
Sbjct: 93 AVDNFNGIKIKGRTIRVDHVS------NYRAPKD--------SEEIDDVTRQLQEKGCGA 138
Query: 267 KTKEDILESKSEQTKSKQRDTQERKREEKRKANRRKSKR--MSKYKENKSENKKTVPQK- 323
+T L SE K ++ +++K ++K+K + K+ R ++ + S +KTV +K
Sbjct: 139 RTPSPSLSESSEDEKPTKKHKKDKKEKKKKKKEKEKADREVQAEQPSSSSPRRKTVKEKD 198
Query: 324 ----KMHKSVSSNDAYNFNLEEGVHLTPFRQKVS---NDSNREENNE 363
K H S +S A EG L R S D RE E
Sbjct: 199 DTGPKKHSSKNSERAQKSEPREGQKLPKSRTAYSGGAEDLERELKKE 245
>gi|118766347 zinc finger CCCH-type domain containing 6 [Homo
sapiens]
Length = 1189
Score = 39.7 bits (91), Expect = 0.007
Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 288 QERKREEKRKANR--RKSKRMSKYKENKSENKKTVPQKKMHKSVSSNDAYNFNLEEGVHL 345
+E K EK+K+ + RKS++ K + K ++K+ +K H S SS+D+ +++L+ V
Sbjct: 32 KEAKENEKQKSEKAYRKSRKKHKKEREKKKSKRRKREKHKHNSPSSDDSSDYSLDSDVEH 91
Query: 346 TPFRQK 351
T K
Sbjct: 92 TESSHK 97
>gi|17978469 cyclin T2 isoform b [Homo sapiens]
Length = 730
Score = 39.3 bits (90), Expect = 0.009
Identities = 60/329 (18%), Positives = 121/329 (36%), Gaps = 24/329 (7%)
Query: 97 YALKGKLTSQQTVEPAQNQEICSSGMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQ 156
Y L Q + A+ +++ S + + S N+ + P I L + L + +
Sbjct: 343 YGLSSHQEWPQHQDSARTEQLYSQKQETSLSGSQYNINFQQGPSISLH-SGLHHRPDKIS 401
Query: 157 IEDQIPTIPQDTLGVDFDSGEAKSTDNVLPRTVSVRSSLKKHCNSICQFDSLDDF----- 211
+ G G +T ++P+ +S+ +K D D +
Sbjct: 402 DHSSVKQEYTHKAGSSKHHGPISTTPGIIPQKMSLDKYREKRKLETLDLDVRDHYIAAQV 461
Query: 212 ETSHLAGKSFEFERVGFLDPLVNMHIP-ENVQHNACQWSKDQVNLSPKLIQPGTFTKTKE 270
E H G+S P + M IP N + + +L ++ P T +
Sbjct: 462 EQQHKQGQSQAASSSSVTSP-IKMKIPIANTEKYMADKKEKSGSLKLRIPIPPTDKSASK 520
Query: 271 DILESKSEQTKSKQRDTQERKREEKRKANRRKSK-RMSKYKENKSENKKTVPQKKMHKSV 329
+ L+ K + + S++ + + + + ++ S+ K+KE+ S T K H
Sbjct: 521 EELKMKIKVSSSERHSSSDEGSGKSKHSSPHISRDHKEKHKEHPSSRHHTSSHKHSHSHS 580
Query: 330 SSNDAYNFNLEEGVHLTPFRQKV---------SNDSNREENNESEVS------LCESSGS 374
S+ + + +G+ T R V S+ S+R+ + ++ S + +SS S
Sbjct: 581 GSSSGGSKHSADGIPPTVLRSPVGLSSDGISSSSSSSRKRLHVNDASHNHHSKMSKSSKS 640
Query: 375 GDDSDDLYLPTCKYIQNPTSNSDRPVTRP 403
S +YI + S + P+ P
Sbjct: 641 SGSSSSSSSSVKQYISSHNSVFNHPLPPP 669
>gi|42560244 peptidylprolyl isomerase G [Homo sapiens]
Length = 754
Score = 39.3 bits (90), Expect = 0.009
Identities = 42/177 (23%), Positives = 76/177 (42%), Gaps = 23/177 (12%)
Query: 266 TKTKEDILESKSEQTKSKQRDTQERKREEKRKANRRKSKRMSKYKE--------NKSENK 317
TK K E+++S+ R + R R R +R +SK +Y+E ++S +
Sbjct: 552 TKGKHSYNSRTRERSRSRDRSRRVRSRTHDR--DRSRSKEYHRYREQEYRRRGRSRSRER 609
Query: 318 KTVPQKKMHKS--VSSNDAYNFNLEEGV--HLTPFRQKVSNDSNREENNESEVSLCESSG 373
+T P + K D+ + EE + +R + S S+R+EN+ESE + S
Sbjct: 610 RTPPGRSRSKDRRRRRRDSRSSEREESQSRNKDKYRNQESKSSHRKENSESEKRMYSKSR 669
Query: 374 SGDDSDDLYLPTCKYIQNP-----TSNSDRPVTRPLAK----RALKYTDEKETEGSK 421
+ S++ Q+P S+ D + + K ++ + EKE + SK
Sbjct: 670 DHNSSNNSREKKADRDQSPFSKIKQSSQDNELKSSMLKNKEDEKIRSSVEKENQKSK 726
Score = 36.2 bits (82), Expect = 0.076
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 261 QPGTFTKTKEDILESKSEQTKSKQRDTQERKREEKRKANRRKSKRMSKYKENKSENKKTV 320
Q + + E E KS++ K K R + ++EK+K R+KSK+ S E+++EN +
Sbjct: 211 QSSSDSSDSESATEEKSKKRKKKHRKNSRKHKKEKKK--RKKSKK-SASSESEAENLEAQ 267
Query: 321 PQ 322
PQ
Sbjct: 268 PQ 269
Score = 35.8 bits (81), Expect = 0.099
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 267 KTKEDILESKSEQTKSKQRDTQERKREEKRKANRRKSK--RMSKYKENKSENKKTVPQKK 324
+ K E++KSK+RD++ + EEKR +R K + K KE +S++K ++
Sbjct: 455 RAKSKSRSKSKEKSKSKERDSKHNRNEEKRMRSRSKGRDHENVKEKEKQSDSKGKDQERS 514
Query: 325 MHKSVS 330
K S
Sbjct: 515 RSKEKS 520
Score = 35.4 bits (80), Expect = 0.13
Identities = 27/136 (19%), Positives = 61/136 (44%), Gaps = 15/136 (11%)
Query: 275 SKSEQTKSKQRDTQERKREEKRKANRRKSKRMSKYKENKSENKKTVPQKKMHKSVSSNDA 334
S+S+ + ++RD++ +REE + N+ K + ++ EN ++ +K+M+ +++
Sbjct: 616 SRSKDRRRRRRDSRSSEREESQSRNKDKYRNQESKSSHRKENSES--EKRMYSKSRDHNS 673
Query: 335 YNFNLEEGV--HLTPFRQ-KVSNDSN----------REENNESEVSLCESSGSGDDSDDL 381
N + E+ +PF + K S+ N +E S V G ++D +
Sbjct: 674 SNNSREKKADRDQSPFSKIKQSSQDNELKSSMLKNKEDEKIRSSVEKENQKSKGQENDHV 733
Query: 382 YLPTCKYIQNPTSNSD 397
+ K+ + +D
Sbjct: 734 HEKNKKFDHESSPGTD 749
Score = 33.5 bits (75), Expect = 0.49
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 6/67 (8%)
Query: 274 ESKSEQTKSKQRDTQERKREEKRKANRRKSKRMSKYKENKSENKKTVPQKKMHKSVSSND 333
+S S+ S E EEK K KR K+++N ++KK ++K K +S++
Sbjct: 205 DSSSDSQSSSDSSDSESATEEKSK------KRKKKHRKNSRKHKKEKKKRKKSKKSASSE 258
Query: 334 AYNFNLE 340
+ NLE
Sbjct: 259 SEAENLE 265
Score = 31.2 bits (69), Expect = 2.4
Identities = 30/182 (16%), Positives = 77/182 (42%), Gaps = 5/182 (2%)
Query: 243 HNACQWSKDQVNLSPKLIQPGTFTKTKEDILESKSEQTKSKQRDTQERKREEKRKANRRK 302
H S ++ N K ++ + DI + + K K + ++R + + R ++ K
Sbjct: 409 HRNVSESPNRKNEKEKKVKDHKSNSKERDIRRNSEKDDKYKNK-VKKRAKSKSRSKSKEK 467
Query: 303 SK---RMSKYKENKSENKKTVPQKKMHKSVSSNDAYNFNLEEGVHLTPFRQKVSNDSNRE 359
SK R SK+ N+ + ++ + + H++V + + + + + ++K ++
Sbjct: 468 SKSKERDSKHNRNEEKRMRSRSKGRDHENVKEKEKQSDSKGKDQERSRSKEKSKQLESKS 527
Query: 360 ENNESEVSLCESSGSGDDSDDLYLPTCKYIQNPTSNSDRPVTRPLAKRALKYTDEKETEG 419
++ S + + S + + K+ N + +R +R ++R T +++
Sbjct: 528 NEHDHSKSKEKDRRAQSRSRECDITKGKHSYN-SRTRERSRSRDRSRRVRSRTHDRDRSR 586
Query: 420 SK 421
SK
Sbjct: 587 SK 588
Score = 30.0 bits (66), Expect = 5.4
Identities = 28/141 (19%), Positives = 60/141 (42%), Gaps = 9/141 (6%)
Query: 267 KTKEDILESKSEQTKSKQRDTQERKREEKRKAN-RRKSKRMSKYKENKSEN--------K 317
+ KE + ++S R ++ K+ + K+N + + R + K++K +N K
Sbjct: 400 RVKERKITDHRNVSESPNRKNEKEKKVKDHKSNSKERDIRRNSEKDDKYKNKVKKRAKSK 459
Query: 318 KTVPQKKMHKSVSSNDAYNFNLEEGVHLTPFRQKVSNDSNREENNESEVSLCESSGSGDD 377
K+ KS + +N N E+ + + N +E+ ++S+ E S S +
Sbjct: 460 SRSKSKEKSKSKERDSKHNRNEEKRMRSRSKGRDHENVKEKEKQSDSKGKDQERSRSKEK 519
Query: 378 SDDLYLPTCKYIQNPTSNSDR 398
S L + ++ + + DR
Sbjct: 520 SKQLESKSNEHDHSKSKEKDR 540
>gi|148839362 LSM14 homolog B [Homo sapiens]
Length = 385
Score = 39.3 bits (90), Expect = 0.009
Identities = 31/135 (22%), Positives = 65/135 (48%), Gaps = 8/135 (5%)
Query: 255 LSPKLIQPGTFTKTKEDILESKSEQTKSKQRDTQERKREEKRKANRRKSKRMSKYKENKS 314
L+ + QP + KT D+++ + Q + + D E +R ++R++ R+++ S+ + +
Sbjct: 185 LNGRQAQPSS--KTASDVVQPAAVQAQGQVND--ENRRPQRRRSGNRRTRNRSRGQNRPT 240
Query: 315 ENKKTVPQKKMHKSVSSNDAYNFNLEEGVHLTPFRQKVS-NDSNREENNESEVSLCESSG 373
K+ + + S +A FN EE F++K++ D E+ E ++++ S
Sbjct: 241 NVKENTIKFEGDFDFESANA-QFNREELDK--EFKKKLNFKDDKAEKGEEKDLAVVTQSA 297
Query: 374 SGDDSDDLYLPTCKY 388
+DL P C Y
Sbjct: 298 EAPAEEDLLGPNCYY 312
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.310 0.127 0.353
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,635,767
Number of Sequences: 37866
Number of extensions: 1001374
Number of successful extensions: 8554
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 186
Number of HSP's successfully gapped in prelim test: 379
Number of HSP's that attempted gapping in prelim test: 5982
Number of HSP's gapped (non-prelim): 2369
length of query: 527
length of database: 18,247,518
effective HSP length: 107
effective length of query: 420
effective length of database: 14,195,856
effective search space: 5962259520
effective search space used: 5962259520
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.