CLTB 33886

Name: CLTB	Sequence: fasta or formatted (229aa)		NCBI GI: 6005995
Description: clathrin, light polypeptide isoform b		Referenced in: ER, Golgi, and the Secretory Pathway
Other entries for this name: alt prot [211aa] clathrin, light polypeptide isoform a
Composition: Amino acid Percentage Count Longest homopolymer A alanine 13.1 30 3 C cysteine 0.9 2 1 D aspartate 6.6 15 2 E glutamate 12.7 29 2 F phenylalanine 3.9 9 2 G glycine 6.6 15 1 H histidine 0.4 1 1 I isoleucine 3.5 8 2 K lysine 7.0 16 2 L leucine 4.4 10 1 M methionine 1.3 3 1 N asparagine 3.5 8 2 P proline 5.2 12 1 Q glutamine 7.4 17 2 R arginine 4.8 11 1 S serine 8.3 19 3 T threonine 3.5 8 2 V valine 3.9 9 1 W tryptophan 1.7 4 1 Y tyrosine 1.3 3 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 clathrin, light polypeptide isoform b CLTB 0.892 clathrin, light polypeptide isoform a CLTA 0.585 clathrin, light polypeptide A isoform c CLTA 0.565 clathrin, light polypeptide A isoform b CLTA 0.493 clathrin, light polypeptide A isoform a MAP7D1 0.035 MAP7 domain containing 1 LEO1 0.035 Leo1, Paf1/RNA polymerase II complex component, homo... GLE1 0.035 GLE1 RNA export mediator homolog isoform 1 ZRSR2 0.035 U2 small nuclear RNA auxiliary factor 1-like 2 GLE1 0.035 GLE1 RNA export mediator homolog isoform 2 PAWR 0.032 PRKC, apoptosis, WT1, regulator MSN 0.032 moesin LOC727832 0.030 golgi autoantigen, golgin subfamily a-like C19orf26 0.030 downstream of Stk11 AP3B1 0.028 adaptor-related protein complex 3, beta 1 subunit [H... DDX46 0.028 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 LOC100131202 0.025 PREDICTED: hypothetical protein LOC400352 0.025 PREDICTED: similar to Putative golgin subfamily A m... LOC100132816 0.025 PREDICTED: similar to Putative golgin subfamily A m... RDX 0.025 radixin C1orf96 0.025 hypothetical protein LOC126731 BAT2D1 0.025 HBxAg transactivated protein 2 UBXN4 0.025 UBX domain containing 2 MAP9 0.025 aster-associated protein EZR 0.023 ezrin EZR 0.023 ezrin LOC283685 0.023 PREDICTED: golgi autoantigen, golgin subfamily a-li... FNBP4 0.023 formin binding protein 4 NOVA2 0.023 neuro-oncological ventral antigen 2 MYO10 0.023 myosin X Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.