Guide to the Human Genome
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Name: ARSA Sequence: fasta or formatted (507aa) NCBI GI: 6005990
Description:

arylsulfatase A isoform a precursor

Referenced in:

Lysosomes and Related Organelles
Phosphatases and Sulfatases

Other entries for this name:
alt mRNA [507aa] arylsulfatase A isoform a precursor
alt prot [423aa] arylsulfatase A isoform b
alt mRNA [507aa] arylsulfatase A isoform a precursor
alt mRNA [507aa] arylsulfatase A isoform a precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.8         55           2
 C cysteine            3.0         15           2
 D aspartate           5.1         26           2
 E glutamate           3.7         19           2
 F phenylalanine       4.3         22           2
 G glycine            11.2         57           2
 H histidine           3.6         18           2
 I isoleucine          1.6          8           1
 K lysine              1.6          8           1
 L leucine            13.4         68           3
 M methionine          2.0         10           1
 N asparagine          1.6          8           1
 P proline             9.9         50           2
 Q glutamine           3.6         18           1
 R arginine            4.5         23           1
 S serine              5.7         29           3
 T threonine           5.7         29           2
 V valine              4.9         25           1
 W tryptophan          0.6          3           1
 Y tyrosine            3.2         16           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   arylsulfatase A isoform a precursor 
ARSA                  1.000   arylsulfatase A isoform a precursor 
ARSA                  1.000   arylsulfatase A isoform a precursor 
ARSA                  1.000   arylsulfatase A isoform a precursor 
ARSA                  0.837   arylsulfatase A isoform b 
GALNS                 0.236   galactosamine (N-acetyl)-6-sulfate sulfatase precurso...
ARSG                  0.235   Arylsulfatase G 
ARSE                  0.202   arylsulfatase E precursor 
ARSF                  0.188   arylsulfatase F precursor 
ARSB                  0.123   arylsulfatase B isoform 1 precursor 
ARSI                  0.121   arylsulfatase family, member I 
ARSB                  0.120   arylsulfatase B isoform 2 precursor 
STS                   0.118   steryl-sulfatase precursor 
ARSH                  0.106   arylsulfatase family, member H 
ARSJ                  0.105   arylsulfatase J 
ARSD                  0.096   arylsulfatase D isoform a precursor 
ARSD                  0.096   arylsulfatase D isoform b precursor 
SGSH                  0.072   N-sulfoglucosamine sulfohydrolase precursor 
GNS                   0.046   glucosamine (N-acetyl)-6-sulfatase precursor 
ARSK                  0.040   arylsulfatase K 
SULF2                 0.038   sulfatase 2 isoform a precursor 
SULF2                 0.038   sulfatase 2 isoform b precursor 
SULF2                 0.038   sulfatase 2 isoform a precursor 
IDS                   0.037   iduronate-2-sulfatase isoform b precursor 
IDS                   0.037   iduronate-2-sulfatase isoform a precursor 
LOC727913             0.021   PREDICTED: similar to iduronate 2-sulfatase (Hunter...
SULF1                 0.020   sulfatase 1 
SULF1                 0.020   sulfatase 1 
SULF1                 0.020   sulfatase 1 
SULF1                 0.020   sulfatase 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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