Guide to the Human Genome
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Name: ZNF175 Sequence: fasta or formatted (711aa) NCBI GI: 6005970
Description:

zinc finger protein 175

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.1         22           1
 C cysteine            6.0         43           2
 D aspartate           3.4         24           2
 E glutamate           7.5         53           2
 F phenylalanine       4.9         35           2
 G glycine             6.3         45           2
 H histidine           6.8         48           2
 I isoleucine          4.4         31           2
 K lysine             10.3         73           2
 L leucine             5.8         41           2
 M methionine          1.4         10           1
 N asparagine          3.2         23           2
 P proline             3.4         24           1
 Q glutamine           7.9         56           2
 R arginine            4.8         34           1
 S serine              8.7         62           3
 T threonine           5.6         40           2
 V valine              3.8         27           2
 W tryptophan          0.3          2           1
 Y tyrosine            2.5         18           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 175 
ZNF81                 0.505   zinc finger protein 81 
ZNF41                 0.485   zinc finger protein 41 
ZNF41                 0.485   zinc finger protein 41 
ZNF585B               0.445   zinc finger protein 585B 
ZNF484                0.441   zinc finger protein 484 isoform a 
ZNF585A               0.409   zinc finger protein 585A 
ZNF585A               0.409   zinc finger protein 585A 
ZNF484                0.408   zinc finger protein 484 isoform b 
ZNF268                0.387   zinc finger protein 268 
ZNF569                0.386   zinc finger protein 569 
LOC100287429          0.385   PREDICTED: hypothetical protein XP_002343926 isofor...
LOC100287429          0.385   PREDICTED: hypothetical protein XP_002343925 isofor...
LOC100287429          0.385   PREDICTED: hypothetical protein XP_002343927 isofor...
ZNF84                 0.385   zinc finger protein 84 
ZNF84                 0.385   zinc finger protein 84 
ZNF184                0.384   zinc finger protein 184 
ZNF624                0.376   zinc finger protein 624 
ZNF630                0.373   zinc finger protein 630 
ZNF615                0.373   zinc finger protein 615 
ZNF420                0.372   zinc finger protein 420 
ZNF300                0.371   zinc finger protein 300 
ZNF665                0.369   zinc finger protein 665 
ZNF135                0.368   zinc finger protein 135 
ZNF470                0.367   zinc finger protein 470 
ZNF33B                0.367   zinc finger protein 33B 
ZNF568                0.365   zinc finger protein 568 
ZNF432                0.364   zinc finger protein 432 
ZNF33A                0.363   zinc finger protein 33A isoform a 
ZNF182                0.362   zinc finger protein 21 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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