Search of human proteins with 58293756

Search of human proteins with 58293756

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|58293756 sterile alpha motif domain containing 13 isoform 1
[Homo sapiens]
         (116 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|58293756 sterile alpha motif domain containing 13 isoform 1 [...   236   3e-63
gi|197927257 sterile alpha motif domain containing 13 isoform 2 ...   207   1e-54
gi|197927255 sterile alpha motif domain containing 13 isoform 2 ...   207   1e-54
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]    113   4e-26
gi|37595530 polyhomeotic-like 2 isoform b [Homo sapiens]               60   4e-10
gi|37595528 polyhomeotic-like 2 isoform a [Homo sapiens]               60   4e-10
gi|158138528 l(3)mbt-like 4 [Homo sapiens]                             58   1e-09
gi|71274154 Scm-like with four mbt domains 2 [Homo sapiens]            56   7e-09
gi|53692193 Scm-like with four mbt domains 1 [Homo sapiens]            54   3e-08
gi|53692191 Scm-like with four mbt domains 1 [Homo sapiens]            54   3e-08
gi|53692195 Scm-like with four mbt domains 1 [Homo sapiens]            54   3e-08
gi|72534680 sex comb on midleg 1 isoform 1 [Homo sapiens]              52   8e-08
gi|6912642 sex comb on midleg 1 isoform 2 [Homo sapiens]               52   1e-07
gi|62953127 polyhomeotic 1-like [Homo sapiens]                         52   1e-07
gi|55770872 l(3)mbt-like 3 isoform b [Homo sapiens]                    52   1e-07
gi|55770870 l(3)mbt-like 3 isoform a [Homo sapiens]                    52   1e-07
gi|76881819 sterile alpha motif domain containing 11 [Homo sapiens]    52   1e-07
gi|148612879 polyhomeotic like 3 [Homo sapiens]                        50   3e-07
gi|5174669 sex comb on midleg-like 2 [Homo sapiens]                    48   2e-06
gi|158508495 sex comb on midleg-like 4 [Homo sapiens]                  47   2e-06
gi|32699038 sterile alpha motif domain containing 7 [Homo sapiens]     44   2e-05
gi|154090976 sterile alpha and TIR motif containing 1 [Homo sapi...    43   6e-05
gi|82830432 sex comb on midleg-like 1 isoform a [Homo sapiens]         41   2e-04
gi|82830436 sex comb on midleg-like 1 isoform c [Homo sapiens]         41   2e-04
gi|82830430 sex comb on midleg-like 1 isoform c [Homo sapiens]         41   2e-04
gi|82830426 sex comb on midleg-like 1 isoform b [Homo sapiens]         41   2e-04
gi|189571685 WD repeat, sterile alpha motif and U-box domain con...    31   0.24 
gi|189571683 WD repeat, sterile alpha motif and U-box domain con...    31   0.24 
gi|189571681 WD repeat, sterile alpha motif and U-box domain con...    31   0.24 
gi|6005824 Sec23-interacting protein p125 [Homo sapiens]               30   0.54 

>gi|58293756 sterile alpha motif domain containing 13 isoform 1
           [Homo sapiens]
          Length = 116

 Score =  236 bits (602), Expect = 3e-63
 Identities = 116/116 (100%), Positives = 116/116 (100%)

Query: 1   MRGVAEVKEPCSLPMLSVDMENKENGSVGVKNSMENGRPPDPADWAVMDVVNYFRTVGFE 60
           MRGVAEVKEPCSLPMLSVDMENKENGSVGVKNSMENGRPPDPADWAVMDVVNYFRTVGFE
Sbjct: 1   MRGVAEVKEPCSLPMLSVDMENKENGSVGVKNSMENGRPPDPADWAVMDVVNYFRTVGFE 60

Query: 61  EQASAFQEQEIDGKSLLLMTRNDVLTGLQLKLGPALKIYEYHVKPLQTKHLKNNSS 116
           EQASAFQEQEIDGKSLLLMTRNDVLTGLQLKLGPALKIYEYHVKPLQTKHLKNNSS
Sbjct: 61  EQASAFQEQEIDGKSLLLMTRNDVLTGLQLKLGPALKIYEYHVKPLQTKHLKNNSS 116


>gi|197927257 sterile alpha motif domain containing 13 isoform 2
           [Homo sapiens]
          Length = 102

 Score =  207 bits (528), Expect = 1e-54
 Identities = 102/102 (100%), Positives = 102/102 (100%)

Query: 15  MLSVDMENKENGSVGVKNSMENGRPPDPADWAVMDVVNYFRTVGFEEQASAFQEQEIDGK 74
           MLSVDMENKENGSVGVKNSMENGRPPDPADWAVMDVVNYFRTVGFEEQASAFQEQEIDGK
Sbjct: 1   MLSVDMENKENGSVGVKNSMENGRPPDPADWAVMDVVNYFRTVGFEEQASAFQEQEIDGK 60

Query: 75  SLLLMTRNDVLTGLQLKLGPALKIYEYHVKPLQTKHLKNNSS 116
           SLLLMTRNDVLTGLQLKLGPALKIYEYHVKPLQTKHLKNNSS
Sbjct: 61  SLLLMTRNDVLTGLQLKLGPALKIYEYHVKPLQTKHLKNNSS 102


>gi|197927255 sterile alpha motif domain containing 13 isoform 2
           [Homo sapiens]
          Length = 102

 Score =  207 bits (528), Expect = 1e-54
 Identities = 102/102 (100%), Positives = 102/102 (100%)

Query: 15  MLSVDMENKENGSVGVKNSMENGRPPDPADWAVMDVVNYFRTVGFEEQASAFQEQEIDGK 74
           MLSVDMENKENGSVGVKNSMENGRPPDPADWAVMDVVNYFRTVGFEEQASAFQEQEIDGK
Sbjct: 1   MLSVDMENKENGSVGVKNSMENGRPPDPADWAVMDVVNYFRTVGFEEQASAFQEQEIDGK 60

Query: 75  SLLLMTRNDVLTGLQLKLGPALKIYEYHVKPLQTKHLKNNSS 116
           SLLLMTRNDVLTGLQLKLGPALKIYEYHVKPLQTKHLKNNSS
Sbjct: 61  SLLLMTRNDVLTGLQLKLGPALKIYEYHVKPLQTKHLKNNSS 102


>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
          Length = 538

 Score =  113 bits (282), Expect = 4e-26
 Identities = 52/77 (67%), Positives = 62/77 (80%)

Query: 38  RPPDPADWAVMDVVNYFRTVGFEEQASAFQEQEIDGKSLLLMTRNDVLTGLQLKLGPALK 97
           +P DP +W VMDVV YF   GF EQA+AFQEQEIDGKSLLLM R DVLTGL ++LGPALK
Sbjct: 455 KPSDPVEWTVMDVVEYFTEAGFPEQATAFQEQEIDGKSLLLMQRTDVLTGLSIRLGPALK 514

Query: 98  IYEYHVKPLQTKHLKNN 114
           IYE+H+K LQ  H +++
Sbjct: 515 IYEHHIKVLQQGHFEDD 531


>gi|37595530 polyhomeotic-like 2 isoform b [Homo sapiens]
          Length = 323

 Score = 60.1 bits (144), Expect = 4e-10
 Identities = 28/62 (45%), Positives = 43/62 (69%), Gaps = 1/62 (1%)

Query: 39  PPDPADWAVMDVVNYFRTV-GFEEQASAFQEQEIDGKSLLLMTRNDVLTGLQLKLGPALK 97
           P +P  W V DV  + R++ G +E A  F+ QEIDG++LLL+  + +++ + +KLGPALK
Sbjct: 253 PSEPTKWNVEDVYEFIRSLPGCQEIAEEFRAQEIDGQALLLLKEDHLMSAMNIKLGPALK 312

Query: 98  IY 99
           IY
Sbjct: 313 IY 314


>gi|37595528 polyhomeotic-like 2 isoform a [Homo sapiens]
          Length = 858

 Score = 60.1 bits (144), Expect = 4e-10
 Identities = 28/62 (45%), Positives = 43/62 (69%), Gaps = 1/62 (1%)

Query: 39  PPDPADWAVMDVVNYFRTV-GFEEQASAFQEQEIDGKSLLLMTRNDVLTGLQLKLGPALK 97
           P +P  W V DV  + R++ G +E A  F+ QEIDG++LLL+  + +++ + +KLGPALK
Sbjct: 788 PSEPTKWNVEDVYEFIRSLPGCQEIAEEFRAQEIDGQALLLLKEDHLMSAMNIKLGPALK 847

Query: 98  IY 99
           IY
Sbjct: 848 IY 849


>gi|158138528 l(3)mbt-like 4 [Homo sapiens]
          Length = 623

 Score = 58.2 bits (139), Expect = 1e-09
 Identities = 27/63 (42%), Positives = 44/63 (69%), Gaps = 1/63 (1%)

Query: 38  RPPDPADWAVMDVVNYFRTV-GFEEQASAFQEQEIDGKSLLLMTRNDVLTGLQLKLGPAL 96
           R    A W V +V  + +++ G EE A  F++++IDGK+ LL+T+ D++  +++KLGPAL
Sbjct: 536 RASQVARWTVDEVAEFVQSLLGCEEHAKCFKKEQIDGKAFLLLTQTDIVKVMKIKLGPAL 595

Query: 97  KIY 99
           KIY
Sbjct: 596 KIY 598


>gi|71274154 Scm-like with four mbt domains 2 [Homo sapiens]
          Length = 894

 Score = 55.8 bits (133), Expect = 7e-09
 Identities = 26/58 (44%), Positives = 38/58 (65%)

Query: 41  DPADWAVMDVVNYFRTVGFEEQASAFQEQEIDGKSLLLMTRNDVLTGLQLKLGPALKI 98
           +P +W V DVV + +       A  FQEQ+IDG++LLL+T   V   ++LKLGPA+K+
Sbjct: 820 NPLEWTVTDVVRFIKLTDCAPLAKIFQEQDIDGQALLLLTLPTVQECMELKLGPAIKL 877


>gi|53692193 Scm-like with four mbt domains 1 [Homo sapiens]
          Length = 866

 Score = 53.5 bits (127), Expect = 3e-08
 Identities = 27/67 (40%), Positives = 43/67 (64%), Gaps = 1/67 (1%)

Query: 41  DPADWAVMDVVNYFRTVGFEEQASAFQEQEIDGKSLLLMTRNDVLTGLQLKLGPALKIYE 100
           +P  W+V DVV + R+      A  F +QEIDG++LLL+T   V   + LKLGPA+K+  
Sbjct: 792 NPLKWSVADVVRFIRSTDCAPLARIFLDQEIDGQALLLLTLPTVQECMDLKLGPAIKLC- 850

Query: 101 YHVKPLQ 107
           +H++ ++
Sbjct: 851 HHIERIK 857


>gi|53692191 Scm-like with four mbt domains 1 [Homo sapiens]
          Length = 866

 Score = 53.5 bits (127), Expect = 3e-08
 Identities = 27/67 (40%), Positives = 43/67 (64%), Gaps = 1/67 (1%)

Query: 41  DPADWAVMDVVNYFRTVGFEEQASAFQEQEIDGKSLLLMTRNDVLTGLQLKLGPALKIYE 100
           +P  W+V DVV + R+      A  F +QEIDG++LLL+T   V   + LKLGPA+K+  
Sbjct: 792 NPLKWSVADVVRFIRSTDCAPLARIFLDQEIDGQALLLLTLPTVQECMDLKLGPAIKLC- 850

Query: 101 YHVKPLQ 107
           +H++ ++
Sbjct: 851 HHIERIK 857


>gi|53692195 Scm-like with four mbt domains 1 [Homo sapiens]
          Length = 866

 Score = 53.5 bits (127), Expect = 3e-08
 Identities = 27/67 (40%), Positives = 43/67 (64%), Gaps = 1/67 (1%)

Query: 41  DPADWAVMDVVNYFRTVGFEEQASAFQEQEIDGKSLLLMTRNDVLTGLQLKLGPALKIYE 100
           +P  W+V DVV + R+      A  F +QEIDG++LLL+T   V   + LKLGPA+K+  
Sbjct: 792 NPLKWSVADVVRFIRSTDCAPLARIFLDQEIDGQALLLLTLPTVQECMDLKLGPAIKLC- 850

Query: 101 YHVKPLQ 107
           +H++ ++
Sbjct: 851 HHIERIK 857


>gi|72534680 sex comb on midleg 1 isoform 1 [Homo sapiens]
          Length = 660

 Score = 52.4 bits (124), Expect = 8e-08
 Identities = 38/100 (38%), Positives = 56/100 (56%), Gaps = 14/100 (14%)

Query: 19  DMEN--KENGSVGVKNSMEN-------GRPPDPADWAVMDVVNYFRTVGFE--EQASAFQ 67
           DME+  K N S G    +E+       GR  DP+ W V DV+ + R    +    A  F+
Sbjct: 560 DMESFWKLNRSPGSDRYLESRDASRLSGR--DPSSWTVEDVMQFVREADPQLGPHADLFR 617

Query: 68  EQEIDGKSLLLMTRNDVLTGLQLKLGPALKIYEYHVKPLQ 107
           + EIDGK+LLL+  + ++  + LKLGPALK+  YH+  L+
Sbjct: 618 KHEIDGKALLLLRSDMMMKYMGLKLGPALKL-SYHIDRLK 656


>gi|6912642 sex comb on midleg 1 isoform 2 [Homo sapiens]
          Length = 591

 Score = 52.0 bits (123), Expect = 1e-07
 Identities = 28/69 (40%), Positives = 43/69 (62%), Gaps = 3/69 (4%)

Query: 41  DPADWAVMDVVNYFRTVGFE--EQASAFQEQEIDGKSLLLMTRNDVLTGLQLKLGPALKI 98
           DP+ W V DV+ + R    +    A  F++ EIDGK+LLL+  + ++  + LKLGPALK+
Sbjct: 520 DPSSWTVEDVMQFVREADPQLGPHADLFRKHEIDGKALLLLRSDMMMKYMGLKLGPALKL 579

Query: 99  YEYHVKPLQ 107
             YH+  L+
Sbjct: 580 -SYHIDRLK 587


>gi|62953127 polyhomeotic 1-like [Homo sapiens]
          Length = 1004

 Score = 52.0 bits (123), Expect = 1e-07
 Identities = 24/59 (40%), Positives = 41/59 (69%), Gaps = 1/59 (1%)

Query: 41  DPADWAVMDVVNYFRTV-GFEEQASAFQEQEIDGKSLLLMTRNDVLTGLQLKLGPALKI 98
           +P+ W+V +V  +  ++ G +E A  F+ QEIDG++LLL+    +++ + +KLGPALKI
Sbjct: 936 NPSRWSVEEVYEFIASLQGCQEIAEEFRSQEIDGQALLLLKEEHLMSAMNIKLGPALKI 994


>gi|55770872 l(3)mbt-like 3 isoform b [Homo sapiens]
          Length = 755

 Score = 51.6 bits (122), Expect = 1e-07
 Identities = 22/56 (39%), Positives = 40/56 (71%), Gaps = 1/56 (1%)

Query: 45  WAVMDVVNYFRTV-GFEEQASAFQEQEIDGKSLLLMTRNDVLTGLQLKLGPALKIY 99
           W+  +V  + +++ G EE    F++++IDG++ LLMT+ D++  + +KLGPALKI+
Sbjct: 683 WSTDEVSEFIQSLPGCEEHGKVFKDEQIDGEAFLLMTQTDIVKIMSIKLGPALKIF 738


>gi|55770870 l(3)mbt-like 3 isoform a [Homo sapiens]
          Length = 780

 Score = 51.6 bits (122), Expect = 1e-07
 Identities = 22/56 (39%), Positives = 40/56 (71%), Gaps = 1/56 (1%)

Query: 45  WAVMDVVNYFRTV-GFEEQASAFQEQEIDGKSLLLMTRNDVLTGLQLKLGPALKIY 99
           W+  +V  + +++ G EE    F++++IDG++ LLMT+ D++  + +KLGPALKI+
Sbjct: 708 WSTDEVSEFIQSLPGCEEHGKVFKDEQIDGEAFLLMTQTDIVKIMSIKLGPALKIF 763


>gi|76881819 sterile alpha motif domain containing 11 [Homo sapiens]
          Length = 681

 Score = 51.6 bits (122), Expect = 1e-07
 Identities = 31/70 (44%), Positives = 41/70 (58%), Gaps = 4/70 (5%)

Query: 33  SMENGRPPDPAD---WAVMDVVNYFRTV-GFEEQASAFQEQEIDGKSLLLMTRNDVLTGL 88
           SM+    P P D   W V DV ++   + G  E    F+EQ IDG++L L+T   +LT +
Sbjct: 528 SMDGEEAPAPEDVTKWTVDDVCSFVGGLSGCGEYTRVFREQGIDGETLPLLTEEHLLTNM 587

Query: 89  QLKLGPALKI 98
            LKLGPALKI
Sbjct: 588 GLKLGPALKI 597


>gi|148612879 polyhomeotic like 3 [Homo sapiens]
          Length = 995

 Score = 50.4 bits (119), Expect = 3e-07
 Identities = 24/59 (40%), Positives = 41/59 (69%), Gaps = 1/59 (1%)

Query: 41  DPADWAVMDVVNYFRTV-GFEEQASAFQEQEIDGKSLLLMTRNDVLTGLQLKLGPALKI 98
           +P+ W V DV  +  ++ G ++ A  F+ QEIDG++LLL+  + +++ + +KLGPALKI
Sbjct: 927 EPSIWTVDDVWAFIHSLPGCQDIADEFRAQEIDGQALLLLKEDHLMSAMNIKLGPALKI 985


>gi|5174669 sex comb on midleg-like 2 [Homo sapiens]
          Length = 700

 Score = 47.8 bits (112), Expect = 2e-06
 Identities = 26/80 (32%), Positives = 46/80 (57%), Gaps = 3/80 (3%)

Query: 34  MENGRPPDPADWAVMDVVNYFRTVGFEEQ---ASAFQEQEIDGKSLLLMTRNDVLTGLQL 90
           ++ G   DP+ W+V +V+ + +    +     A  F++ EIDGK+L L+  + ++  + L
Sbjct: 620 LKQGFSKDPSTWSVDEVIQFMKHTDPQISGPLADLFRQHEIDGKALFLLKSDVMMKYMGL 679

Query: 91  KLGPALKIYEYHVKPLQTKH 110
           KLGPALK+  Y  K  + K+
Sbjct: 680 KLGPALKLCYYIEKLKEGKY 699


>gi|158508495 sex comb on midleg-like 4 [Homo sapiens]
          Length = 414

 Score = 47.4 bits (111), Expect = 2e-06
 Identities = 34/107 (31%), Positives = 55/107 (51%), Gaps = 7/107 (6%)

Query: 7   VKEPCSLPMLSV-DMENKENGSVGVKNSMENGRPP--DPADWAVMDVVNYFRTV---GFE 60
           ++ P S P  +   +E     S   +++ +  RP   +P+ W V DVV + +        
Sbjct: 305 LRPPASSPKRNTTSLEGNRCASSPSQDAQDARRPRSRNPSAWTVEDVVWFVKDADPQALG 364

Query: 61  EQASAFQEQEIDGKSLLLMTRNDVLTGLQLKLGPALKIYEYHVKPLQ 107
                F++ EIDG +LLL+  + V+  L LKLGPALK+  YH+  L+
Sbjct: 365 PHVELFRKHEIDGNALLLLKSDMVMKYLGLKLGPALKLC-YHIDKLK 410


>gi|32699038 sterile alpha motif domain containing 7 [Homo sapiens]
          Length = 446

 Score = 44.3 bits (103), Expect = 2e-05
 Identities = 24/59 (40%), Positives = 36/59 (61%), Gaps = 1/59 (1%)

Query: 41  DPADWAVMDVVNYFRTV-GFEEQASAFQEQEIDGKSLLLMTRNDVLTGLQLKLGPALKI 98
           D   W V DV ++ R++ G  + A  F++  IDG++L L+T   +   + LKLGPALKI
Sbjct: 323 DIQKWTVDDVHSFIRSLPGCSDYAQVFKDHAIDGETLPLLTEEHLRGTMGLKLGPALKI 381


>gi|154090976 sterile alpha and TIR motif containing 1 [Homo
           sapiens]
          Length = 724

 Score = 42.7 bits (99), Expect = 6e-05
 Identities = 20/69 (28%), Positives = 36/69 (52%)

Query: 40  PDPADWAVMDVVNYFRTVGFEEQASAFQEQEIDGKSLLLMTRNDVLTGLQLKLGPALKIY 99
           P    W   +V  + + +GF +   +F+EQ++DG  LL +T  ++ T L +K G   K +
Sbjct: 407 PSVPSWKEAEVQTWLQQIGFSKYCESFREQQVDGDLLLRLTEEELQTDLGMKSGITRKRF 466

Query: 100 EYHVKPLQT 108
              +  L+T
Sbjct: 467 FRELTELKT 475


>gi|82830432 sex comb on midleg-like 1 isoform a [Homo sapiens]
          Length = 329

 Score = 40.8 bits (94), Expect = 2e-04
 Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 3/75 (4%)

Query: 42  PADWAVMDVVNYFRT---VGFEEQASAFQEQEIDGKSLLLMTRNDVLTGLQLKLGPALKI 98
           P+ W+V  VV + +    +        F+  EIDGK+LLL+T + +L  L +KLG A+K+
Sbjct: 255 PSTWSVEAVVLFLKQTDPLALCPLVDLFRSHEIDGKALLLLTSDVLLKHLGVKLGTAVKL 314

Query: 99  YEYHVKPLQTKHLKN 113
             Y  +  Q K  +N
Sbjct: 315 CYYIDRLKQGKCFEN 329


>gi|82830436 sex comb on midleg-like 1 isoform c [Homo sapiens]
          Length = 208

 Score = 40.8 bits (94), Expect = 2e-04
 Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 3/75 (4%)

Query: 42  PADWAVMDVVNYFRT---VGFEEQASAFQEQEIDGKSLLLMTRNDVLTGLQLKLGPALKI 98
           P+ W+V  VV + +    +        F+  EIDGK+LLL+T + +L  L +KLG A+K+
Sbjct: 134 PSTWSVEAVVLFLKQTDPLALCPLVDLFRSHEIDGKALLLLTSDVLLKHLGVKLGTAVKL 193

Query: 99  YEYHVKPLQTKHLKN 113
             Y  +  Q K  +N
Sbjct: 194 CYYIDRLKQGKCFEN 208


>gi|82830430 sex comb on midleg-like 1 isoform c [Homo sapiens]
          Length = 208

 Score = 40.8 bits (94), Expect = 2e-04
 Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 3/75 (4%)

Query: 42  PADWAVMDVVNYFRT---VGFEEQASAFQEQEIDGKSLLLMTRNDVLTGLQLKLGPALKI 98
           P+ W+V  VV + +    +        F+  EIDGK+LLL+T + +L  L +KLG A+K+
Sbjct: 134 PSTWSVEAVVLFLKQTDPLALCPLVDLFRSHEIDGKALLLLTSDVLLKHLGVKLGTAVKL 193

Query: 99  YEYHVKPLQTKHLKN 113
             Y  +  Q K  +N
Sbjct: 194 CYYIDRLKQGKCFEN 208


>gi|82830426 sex comb on midleg-like 1 isoform b [Homo sapiens]
          Length = 302

 Score = 40.8 bits (94), Expect = 2e-04
 Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 3/75 (4%)

Query: 42  PADWAVMDVVNYFRT---VGFEEQASAFQEQEIDGKSLLLMTRNDVLTGLQLKLGPALKI 98
           P+ W+V  VV + +    +        F+  EIDGK+LLL+T + +L  L +KLG A+K+
Sbjct: 228 PSTWSVEAVVLFLKQTDPLALCPLVDLFRSHEIDGKALLLLTSDVLLKHLGVKLGTAVKL 287

Query: 99  YEYHVKPLQTKHLKN 113
             Y  +  Q K  +N
Sbjct: 288 CYYIDRLKQGKCFEN 302


>gi|189571685 WD repeat, sterile alpha motif and U-box domain
           containing 1 [Homo sapiens]
          Length = 476

 Score = 30.8 bits (68), Expect = 0.24
 Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 2/67 (2%)

Query: 44  DWAVMDVVNYFRTVGFEEQASAFQEQEIDGKSLLLMTRNDVLTGLQLK-LGPALKIYEYH 102
           DW+  DV  +      ++    F+   IDGK LL +T+  +   L+++ LG   K+    
Sbjct: 331 DWSEEDVSTWLCAQDLKDLVGIFKMNNIDGKELLNLTKESLADDLKIESLGLRSKVLR-K 389

Query: 103 VKPLQTK 109
           ++ L+TK
Sbjct: 390 IEELRTK 396


>gi|189571683 WD repeat, sterile alpha motif and U-box domain
           containing 1 [Homo sapiens]
          Length = 476

 Score = 30.8 bits (68), Expect = 0.24
 Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 2/67 (2%)

Query: 44  DWAVMDVVNYFRTVGFEEQASAFQEQEIDGKSLLLMTRNDVLTGLQLK-LGPALKIYEYH 102
           DW+  DV  +      ++    F+   IDGK LL +T+  +   L+++ LG   K+    
Sbjct: 331 DWSEEDVSTWLCAQDLKDLVGIFKMNNIDGKELLNLTKESLADDLKIESLGLRSKVLR-K 389

Query: 103 VKPLQTK 109
           ++ L+TK
Sbjct: 390 IEELRTK 396


>gi|189571681 WD repeat, sterile alpha motif and U-box domain
           containing 1 [Homo sapiens]
          Length = 476

 Score = 30.8 bits (68), Expect = 0.24
 Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 2/67 (2%)

Query: 44  DWAVMDVVNYFRTVGFEEQASAFQEQEIDGKSLLLMTRNDVLTGLQLK-LGPALKIYEYH 102
           DW+  DV  +      ++    F+   IDGK LL +T+  +   L+++ LG   K+    
Sbjct: 331 DWSEEDVSTWLCAQDLKDLVGIFKMNNIDGKELLNLTKESLADDLKIESLGLRSKVLR-K 389

Query: 103 VKPLQTK 109
           ++ L+TK
Sbjct: 390 IEELRTK 396


>gi|6005824 Sec23-interacting protein p125 [Homo sapiens]
          Length = 1000

 Score = 29.6 bits (65), Expect = 0.54
 Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 1/55 (1%)

Query: 47  VMDVVNYFRTVGFEEQASAFQEQEIDGKSLLLMTRNDVLTGLQLKLGPALKIYEY 101
           V+ +      +   E  S F++++ID +SLL+ T +D L  + + LGP  KI  +
Sbjct: 646 VLTLQETLEALSLSEYFSTFEKEKIDMESLLMCTVDD-LKEMGIPLGPRKKIANF 699


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.313    0.131    0.375 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,664,201
Number of Sequences: 37866
Number of extensions: 187370
Number of successful extensions: 328
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 286
Number of HSP's gapped (non-prelim): 43
length of query: 116
length of database: 18,247,518
effective HSP length: 86
effective length of query: 30
effective length of database: 14,991,042
effective search space: 449731260
effective search space used: 449731260
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.