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Search of human proteins with 56606142
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|56606142 complement component 1, q subcomponent-like 4 [Homo
sapiens]
(238 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|56606142 complement component 1, q subcomponent-like 4 [Homo ... 509 e-145
gi|5729785 complement component 1, q subcomponent-like 1 [Homo s... 351 3e-97
gi|58801559 complement component 1, q subcomponent-like 3 [Homo ... 348 2e-96
gi|154937344 complement component 1, q subcomponent-like 2 [Homo... 325 3e-89
gi|32895368 alpha 1 type VIII collagen precursor [Homo sapiens] 137 1e-32
gi|17738302 alpha 1 type VIII collagen precursor [Homo sapiens] 137 1e-32
gi|18105032 type X collagen alpha 1 precursor [Homo sapiens] 133 1e-31
gi|87298828 complement component 1, q subcomponent, B chain prec... 130 8e-31
gi|56786155 complement component 1, q subcomponent, C chain prec... 121 6e-28
gi|166235903 complement component 1, q subcomponent, C chain pre... 121 6e-28
gi|32964830 collagen, type VIII, alpha 2 [Homo sapiens] 121 6e-28
gi|94818738 C1q and tumor necrosis factor related protein 2 [Hom... 117 7e-27
gi|4757760 adiponectin precursor [Homo sapiens] 116 1e-26
gi|7705753 complement component 1, q subcomponent, A chain precu... 113 2e-25
gi|14149712 C1q and tumor necrosis factor related protein 5 prec... 113 2e-25
gi|13994280 C1q and tumor necrosis factor related protein 7 isof... 112 4e-25
gi|206597454 C1q and tumor necrosis factor related protein 7 iso... 112 4e-25
gi|206597452 C1q and tumor necrosis factor related protein 7 iso... 112 4e-25
gi|122937273 hypothetical protein LOC131149 [Homo sapiens] 111 6e-25
gi|65301115 C1q and tumor necrosis factor related protein 9 [Hom... 110 8e-25
gi|56847616 C1q and tumor necrosis factor related protein 9B [Ho... 110 1e-24
gi|13569919 C1q and tumor necrosis factor related protein 3 isof... 107 9e-24
gi|62739183 C1q and tumor necrosis factor related protein 3 isof... 107 9e-24
gi|5901944 elastin microfibril interfacer 1 [Homo sapiens] 98 5e-21
gi|116686136 C1q and tumor necrosis factor related protein 8 [Ho... 92 3e-19
gi|89886217 cerebellin 3 precursor [Homo sapiens] 90 2e-18
gi|50428933 C1q domain containing 1 isoform 1 [Homo sapiens] 87 1e-17
gi|50428931 C1q domain containing 1 isoform 3 [Homo sapiens] 87 1e-17
gi|23503235 C1q domain containing 1 isoform 2 [Homo sapiens] 87 1e-17
gi|32698861 cerebellin 2 precursor [Homo sapiens] 87 2e-17
>gi|56606142 complement component 1, q subcomponent-like 4 [Homo
sapiens]
Length = 238
Score = 509 bits (1311), Expect = e-145
Identities = 238/238 (100%), Positives = 238/238 (100%)
Query: 1 MVLLLLVAIPLLVHSSRGPAHYEMLGRCRMVCDPHGPRGPGPDGAPASVPPFPPGAKGEV 60
MVLLLLVAIPLLVHSSRGPAHYEMLGRCRMVCDPHGPRGPGPDGAPASVPPFPPGAKGEV
Sbjct: 1 MVLLLLVAIPLLVHSSRGPAHYEMLGRCRMVCDPHGPRGPGPDGAPASVPPFPPGAKGEV 60
Query: 61 GRRGKAGLRGPPGPPGPRGPPGEPGRPGPPGPPGPGPGGVAPAAGYVPRIAFYAGLRRPH 120
GRRGKAGLRGPPGPPGPRGPPGEPGRPGPPGPPGPGPGGVAPAAGYVPRIAFYAGLRRPH
Sbjct: 61 GRRGKAGLRGPPGPPGPRGPPGEPGRPGPPGPPGPGPGGVAPAAGYVPRIAFYAGLRRPH 120
Query: 121 EGYEVLRFDDVVTNVGNAYEAASGKFTCPMPGVYFFAYHVLMRGGDGTSMWADLMKNGQV 180
EGYEVLRFDDVVTNVGNAYEAASGKFTCPMPGVYFFAYHVLMRGGDGTSMWADLMKNGQV
Sbjct: 121 EGYEVLRFDDVVTNVGNAYEAASGKFTCPMPGVYFFAYHVLMRGGDGTSMWADLMKNGQV 180
Query: 181 RASAIAQDADQNYDYASNSVILHLDVGDEVFIKLDGGKVHGGNTNKYSTFSGFIIYPD 238
RASAIAQDADQNYDYASNSVILHLDVGDEVFIKLDGGKVHGGNTNKYSTFSGFIIYPD
Sbjct: 181 RASAIAQDADQNYDYASNSVILHLDVGDEVFIKLDGGKVHGGNTNKYSTFSGFIIYPD 238
>gi|5729785 complement component 1, q subcomponent-like 1 [Homo
sapiens]
Length = 258
Score = 351 bits (901), Expect = 3e-97
Identities = 180/258 (69%), Positives = 195/258 (75%), Gaps = 20/258 (7%)
Query: 1 MVLLLLVAIPLLVHSSRGPAHYEMLGRCRMVCDPHGPRGPGP----DGAPA-----SVPP 51
M+L+L+V IP+LV S HYEMLG CRMVCDP+ RGPG DG A PP
Sbjct: 1 MLLVLVVLIPVLVSSGGPEGHYEMLGTCRMVCDPYPARGPGAGARTDGGDALSEQSGAPP 60
Query: 52 ---FPPGAKGEVGRRGKAGLRGPPG---PPGPRGPPGE---PGRPGPPGPPGPGPGGVAP 102
G +G+ GR GK G GPPG PPGP GPPGE PG+PGPPG PG G G
Sbjct: 61 PSTLVQGPQGKPGRTGKPGPPGPPGDPGPPGPVGPPGEKGEPGKPGPPGLPGAGGSGAIS 120
Query: 103 AAGY--VPRIAFYAGLRRPHEGYEVLRFDDVVTNVGNAYEAASGKFTCPMPGVYFFAYHV 160
A Y VPR+AFYAGL+ PHEGYEVL+FDDVVTN+GN Y+AASGKFTC +PG YFF YHV
Sbjct: 121 TATYTTVPRVAFYAGLKNPHEGYEVLKFDDVVTNLGNNYDAASGKFTCNIPGTYFFTYHV 180
Query: 161 LMRGGDGTSMWADLMKNGQVRASAIAQDADQNYDYASNSVILHLDVGDEVFIKLDGGKVH 220
LMRGGDGTSMWADL KNGQVRASAIAQDADQNYDYASNSVILHLD GDEVFIKLDGGK H
Sbjct: 181 LMRGGDGTSMWADLCKNGQVRASAIAQDADQNYDYASNSVILHLDAGDEVFIKLDGGKAH 240
Query: 221 GGNTNKYSTFSGFIIYPD 238
GGN+NKYSTFSGFIIY D
Sbjct: 241 GGNSNKYSTFSGFIIYSD 258
>gi|58801559 complement component 1, q subcomponent-like 3 [Homo
sapiens]
Length = 255
Score = 348 bits (894), Expect = 2e-96
Identities = 179/255 (70%), Positives = 197/255 (77%), Gaps = 17/255 (6%)
Query: 1 MVLLLLVAIPLLVHSSRGPAHYEMLGRCRMVCDPHG-PRGPG----PD-GAPASVPPFPP 54
MVLLL++ IP+LV S+ AHYEMLG CRMVCDP+G + P PD G S+P F
Sbjct: 1 MVLLLVILIPVLVSSAGTSAHYEMLGTCRMVCDPYGGTKAPSTAATPDRGLMQSLPTFIQ 60
Query: 55 GAKGEVGRRGKAGLRGPPG---PPGPRGPPGE---PGR---PGPPGPPGPGPGGVAPAAG 105
G KGE GR GKAG RGPPG PPGP GPPGE PGR PGPPG PG G AA
Sbjct: 61 GPKGEAGRPGKAGPRGPPGEPGPPGPMGPPGEKGEPGRQGLPGPPGAPGLNAAGAISAAT 120
Query: 106 Y--VPRIAFYAGLRRPHEGYEVLRFDDVVTNVGNAYEAASGKFTCPMPGVYFFAYHVLMR 163
Y VP+IAFYAGL+R HEGYEVL+FDDVVTN+GN Y+ +GKFTC +PG+YFF YHVLMR
Sbjct: 121 YSTVPKIAFYAGLKRQHEGYEVLKFDDVVTNLGNHYDPTTGKFTCSIPGIYFFTYHVLMR 180
Query: 164 GGDGTSMWADLMKNGQVRASAIAQDADQNYDYASNSVILHLDVGDEVFIKLDGGKVHGGN 223
GGDGTSMWADL KN QVRASAIAQDADQNYDYASNSV+LHL+ GDEV+IKLDGGK HGGN
Sbjct: 181 GGDGTSMWADLCKNNQVRASAIAQDADQNYDYASNSVVLHLEPGDEVYIKLDGGKAHGGN 240
Query: 224 TNKYSTFSGFIIYPD 238
NKYSTFSGFIIY D
Sbjct: 241 NNKYSTFSGFIIYAD 255
>gi|154937344 complement component 1, q subcomponent-like 2 [Homo
sapiens]
Length = 287
Score = 325 bits (832), Expect = 3e-89
Identities = 170/287 (59%), Positives = 194/287 (67%), Gaps = 49/287 (17%)
Query: 1 MVLLLLVAIPLLVHSS-RGPAHYEMLGRCRMVCDPH--GPRG---------PGPDGAPAS 48
M L LL+A+PLL+ ++ RG AHYEM+G CRM+CDP+ P G PGP A
Sbjct: 1 MALGLLIAVPLLLQAAPRGAAHYEMMGTCRMICDPYTAAPGGEPPGAKAQPPGPSTAALE 60
Query: 49 V---------PPFPPGAKGEVGRRGKAGLRGPPG---PPGPRGPPGEPGRPGPPGPPG-- 94
V PPF G KG+ GR GK G RGPPG PPGPRGPPGE G G PG PG
Sbjct: 61 VMQDLSANPPPPFIQGPKGDPGRPGKPGPRGPPGEPGPPGPRGPPGEKGDSGRPGLPGLQ 120
Query: 95 ------PGPGGVAPAAGYV-----------------PRIAFYAGLRRPHEGYEVLRFDDV 131
G G V AG P+IAFY GL+ PHEGYEVL+FDDV
Sbjct: 121 LTAGTASGVGVVGGGAGVGGDSEGEVTSALSATFSGPKIAFYVGLKSPHEGYEVLKFDDV 180
Query: 132 VTNVGNAYEAASGKFTCPMPGVYFFAYHVLMRGGDGTSMWADLMKNGQVRASAIAQDADQ 191
VTN+GN Y+ +GKF+C + G+YFF YH+LMRGGDGTSMWADL KNGQVRASAIAQDADQ
Sbjct: 181 VTNLGNHYDPTTGKFSCQVRGIYFFTYHILMRGGDGTSMWADLCKNGQVRASAIAQDADQ 240
Query: 192 NYDYASNSVILHLDVGDEVFIKLDGGKVHGGNTNKYSTFSGFIIYPD 238
NYDYASNSV+LHLD GDEV++KLDGGK HGGN NKYSTFSGF++YPD
Sbjct: 241 NYDYASNSVVLHLDSGDEVYVKLDGGKAHGGNNNKYSTFSGFLLYPD 287
>gi|32895368 alpha 1 type VIII collagen precursor [Homo sapiens]
Length = 744
Score = 137 bits (344), Expect = 1e-32
Identities = 90/242 (37%), Positives = 121/242 (50%), Gaps = 44/242 (18%)
Query: 34 PHGPRG-PGPDGAPASVPPFPPGAKGEVGRRGKAGLRGPPGPPGPRGPPGEPGRPGPPGP 92
P GP G PGP G P P PPG G +G+ G AGL GPPG PG GP G+PG PGPPGP
Sbjct: 508 PIGPPGIPGPKGEPGL--PGPPGFPG-IGKPGVAGLHGPPGKPGALGPQGQPGLPGPPGP 564
Query: 93 PG-PGPGGV-----APAAGYVPRIAF-YAGLRRPH-----------EGYEV--------- 125
PG PGP V P Y+P + G++ PH YE+
Sbjct: 565 PGPPGPPAVMPPTPPPQGEYLPDMGLGIDGVKPPHAYGAKKGKNGGPAYEMPAFTAELTA 624
Query: 126 --------LRFDDVVTNVGNAYEAASGKFTCPMPGVYFFAYHVLMRGGDGTSMWADLMKN 177
++F+ ++ N Y +G FTC +PGVY+FAYHV +GG ++W L KN
Sbjct: 625 PFPPVGAPVKFNKLLYNGRQNYNPQTGIFTCEVPGVYYFAYHVHCKGG---NVWVALFKN 681
Query: 178 GQVRASAIAQDADQNYDYASNSVILHLDVGDEVFIKLDGGKVHGGNTNKY--STFSGFII 235
+ + D AS S +L L GD VF+++ + G +Y S+FSG+++
Sbjct: 682 NEPVMYTYDEYKKGFLDQASGSAVLLLRPGDRVFLQMPSEQAAGLYAGQYVHSSFSGYLL 741
Query: 236 YP 237
YP
Sbjct: 742 YP 743
Score = 68.2 bits (165), Expect = 6e-12
Identities = 49/125 (39%), Positives = 56/125 (44%), Gaps = 23/125 (18%)
Query: 18 GPAHYEMLGRCRMVCDPHGPRGP-------GPDGAPASV----PPFPPGAKGEVGRRGKA 66
GP +G P G +GP GP G P P PPGA G G +G+
Sbjct: 357 GPKGDRGMGGVPGALGPRGEKGPIGAPGIGGPPGEPGLPGIPGPMGPPGAIGFPGPKGEG 416
Query: 67 GLRGPPGPPGPRGPPGEPGRPGPP------GPPG----PGPGGVAPAAGY--VPRIAFYA 114
G+ GP GPPGP+G PG G PG P GPPG PGP G AG VP +
Sbjct: 417 GIVGPQGPPGPKGEPGLQGFPGKPGFLGEVGPPGMRGLPGPIGPKGEAGQKGVPGLPGVP 476
Query: 115 GLRRP 119
GL P
Sbjct: 477 GLLGP 481
Score = 66.6 bits (161), Expect = 2e-11
Identities = 41/94 (43%), Positives = 50/94 (53%), Gaps = 12/94 (12%)
Query: 36 GPRGP-GPDGAPASVPPFPPGAKGEVGRRGKAGLRGPPGPPGPRGPPGE-----PGRPGP 89
GP+GP GP G P P PG G+ G +G G +G PGP G RGP G+ PG PG
Sbjct: 194 GPQGPPGPHGLPGIGKPGGPGLPGQPGPKGDRGPKGLPGPQGLRGPKGDKGFGMPGAPGV 253
Query: 90 PGPPG----PGPGGVAPAAGYVPRIAFYAGLRRP 119
GPPG PGP G+ P G P + + G + P
Sbjct: 254 KGPPGMHGPPGPVGL-PGVG-KPGVTGFPGPQGP 285
Score = 66.2 bits (160), Expect = 2e-11
Identities = 41/97 (42%), Positives = 52/97 (53%), Gaps = 20/97 (20%)
Query: 18 GPAHYEMLGRCRMVCDPHGPRGPGPDGAPASVPPFPPGAKGEVGRRGK---AGLRGPPGP 74
GP Y +G+ P PG G P ++ PGAKGE+G++G+ G+ GP GP
Sbjct: 150 GPQGYPGVGK---------PGMPGMPGKPGAMGM--PGAKGEIGQKGEIGPMGIPGPQGP 198
Query: 75 PGPRGPP--GEPGRPGPPGPPGP----GPGGVAPAAG 105
PGP G P G+PG PG PG PGP GP G+ G
Sbjct: 199 PGPHGLPGIGKPGGPGLPGQPGPKGDRGPKGLPGPQG 235
Score = 63.9 bits (154), Expect = 1e-10
Identities = 35/70 (50%), Positives = 38/70 (54%), Gaps = 7/70 (10%)
Query: 37 PRGPGPDGAPASVPPFPPGAKGEVGRRGKAGL------RGPPGPPGPRGPPGEPGRPGPP 90
P PGP G P P PG KG+ G G G +GP G PG GPPGEPG PG P
Sbjct: 339 PGLPGPPGLPGIGKPGFPGPKGDRGMGGVPGALGPRGEKGPIGAPGIGGPPGEPGLPGIP 398
Query: 91 GPPGPGPGGV 100
GP GP PG +
Sbjct: 399 GPMGP-PGAI 407
Score = 62.8 bits (151), Expect = 3e-10
Identities = 40/86 (46%), Positives = 45/86 (52%), Gaps = 16/86 (18%)
Query: 34 PHGPRGPGPDGAPASVPPF--PPGAKGEVGRRGKAGLRGPPGPPGPRGPPGEPGRPGPPG 91
P P PGP G P VP PPG G +G+ G+ G+ G PG PG +G G PG PGPPG
Sbjct: 289 PGAPGEPGPQG-PIGVPGVQGPPGIPG-IGKPGQDGIPGQPGFPGGKGEQGLPGLPGPPG 346
Query: 92 PPG------PGP------GGVAPAAG 105
PG PGP GGV A G
Sbjct: 347 LPGIGKPGFPGPKGDRGMGGVPGALG 372
Score = 60.8 bits (146), Expect = 1e-09
Identities = 38/87 (43%), Positives = 43/87 (49%), Gaps = 15/87 (17%)
Query: 34 PHGPRG-PGPDGAPASVP-------------PFPPGAKGEVGRRGKAGLRGPPGPPGPRG 79
P GP+G PG G P P P G KGE G++G GL G PG GP+G
Sbjct: 424 PPGPKGEPGLQGFPGKPGFLGEVGPPGMRGLPGPIGPKGEAGQKGVPGLPGVPGLLGPKG 483
Query: 80 PPGEPGRPGPPGPPG-PGPGGVAPAAG 105
PG PG G GPPG PG GG + G
Sbjct: 484 EPGIPGDQGLQGPPGIPGIGGPSGPIG 510
Score = 60.5 bits (145), Expect = 1e-09
Identities = 33/72 (45%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Query: 35 HGPRGPGPDGAPASVPPFPPGAKGEVGRRGKAGLRGPPGPPGPRGPPGEPGRPGPPGPPG 94
HGP PGP G P P G G G GK G G PGP GP G PG G PG PG
Sbjct: 260 HGP--PGPVGLPGVGKPGVTGFPGPQGPLGKPGAPGEPGPQGPIGVPGVQGPPGIPGIGK 317
Query: 95 PGPGGVAPAAGY 106
PG G+ G+
Sbjct: 318 PGQDGIPGQPGF 329
Score = 57.4 bits (137), Expect = 1e-08
Identities = 35/75 (46%), Positives = 38/75 (50%), Gaps = 9/75 (12%)
Query: 34 PHGPRGPGPDGAPASV-------PPFPPGAKGEVGRRGKAGLRGPPGPPGPRGPPGEPGR 86
P G +G G GAP PP P G G VG+ G G GP GP G G PGEPG
Sbjct: 239 PKGDKGFGMPGAPGVKGPPGMHGPPGPVGLPG-VGKPGVTGFPGPQGPLGKPGAPGEPGP 297
Query: 87 PGPPGPPG-PGPGGV 100
GP G PG GP G+
Sbjct: 298 QGPIGVPGVQGPPGI 312
Score = 55.8 bits (133), Expect = 3e-08
Identities = 31/64 (48%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 40 PGPDGAPASVPPFPPGAKGEVGRRGKAGLRGPPGPPGPRGPPGEPGRPGPPGPPG-PG-- 96
PGP G P P PG G+ G G G +G G G GP G PG GPPGP G PG
Sbjct: 149 PGPQGYPGVGKPGMPGMPGKPGAMGMPGAKGEIGQKGEIGPMGIPGPQGPPGPHGLPGIG 208
Query: 97 -PGG 99
PGG
Sbjct: 209 KPGG 212
Score = 55.8 bits (133), Expect = 3e-08
Identities = 34/71 (47%), Positives = 37/71 (52%), Gaps = 7/71 (9%)
Query: 36 GPRG-PGPDGAPASVPPFPPGAKGEVGRRGKAGLRGPPGPPGPRGPPGEPGRPGPPGPPG 94
GP G PGP G PP P G G +G+ G GL G PGP G RGP G PG G GP G
Sbjct: 188 GPMGIPGPQG-----PPGPHGLPG-IGKPGGPGLPGQPGPKGDRGPKGLPGPQGLRGPKG 241
Query: 95 PGPGGVAPAAG 105
G+ A G
Sbjct: 242 DKGFGMPGAPG 252
Score = 53.5 bits (127), Expect = 2e-07
Identities = 35/74 (47%), Positives = 40/74 (54%), Gaps = 15/74 (20%)
Query: 36 GPRG-PGPDGAPASVPPFPPGAKGEVGRRGKAGLRGPPGPPGPRGPPGEPGRPGPPGPPG 94
GPRG PGP G PP PPG G G+ G G PGP+G PG G+PG PG PG
Sbjct: 121 GPRGEPGPRG-----PPGPPGLPGH-------GIPGIKGKPGPQGYPG-VGKPGMPGMPG 167
Query: 95 -PGPGGVAPAAGYV 107
PG G+ A G +
Sbjct: 168 KPGAMGMPGAKGEI 181
Score = 51.6 bits (122), Expect = 6e-07
Identities = 37/85 (43%), Positives = 39/85 (45%), Gaps = 14/85 (16%)
Query: 34 PHGPRGPGPDGAPASVPPFPPGAKG--EVGRRGKAGLRGPPGPPGPRGPPGE------PG 85
P P G G G P P PPG G + G G G RG G PG GP GE PG
Sbjct: 327 PGFPGGKGEQGLPGL--PGPPGLPGIGKPGFPGPKGDRGMGGVPGALGPRGEKGPIGAPG 384
Query: 86 RPGPPGPPG----PGPGGVAPAAGY 106
GPPG PG PGP G A G+
Sbjct: 385 IGGPPGEPGLPGIPGPMGPPGAIGF 409
Score = 49.3 bits (116), Expect = 3e-06
Identities = 25/51 (49%), Positives = 28/51 (54%), Gaps = 8/51 (15%)
Query: 63 RGKAGLRGPPGPPGPRGPPGEP--------GRPGPPGPPGPGPGGVAPAAG 105
RG+ G RG PGP GP GPPG P G+PGP G PG G G+ G
Sbjct: 117 RGEQGPRGEPGPRGPPGPPGLPGHGIPGIKGKPGPQGYPGVGKPGMPGMPG 167
Score = 45.4 bits (106), Expect = 4e-05
Identities = 27/62 (43%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
Query: 49 VPPFPPGAKGEVGRRGK----AGLRGPPGPPGPRGPPGEPGRPGPPGPPGPGPGGVAPAA 104
+ P P K V ++GK A LRG GP G GP G PG PG PG PG G
Sbjct: 93 IQPAPRMGKEAVPKKGKEIPLASLRGEQGPRGEPGPRGPPGPPGLPGHGIPGIKGKPGPQ 152
Query: 105 GY 106
GY
Sbjct: 153 GY 154
>gi|17738302 alpha 1 type VIII collagen precursor [Homo sapiens]
Length = 744
Score = 137 bits (344), Expect = 1e-32
Identities = 90/242 (37%), Positives = 121/242 (50%), Gaps = 44/242 (18%)
Query: 34 PHGPRG-PGPDGAPASVPPFPPGAKGEVGRRGKAGLRGPPGPPGPRGPPGEPGRPGPPGP 92
P GP G PGP G P P PPG G +G+ G AGL GPPG PG GP G+PG PGPPGP
Sbjct: 508 PIGPPGIPGPKGEPGL--PGPPGFPG-IGKPGVAGLHGPPGKPGALGPQGQPGLPGPPGP 564
Query: 93 PG-PGPGGV-----APAAGYVPRIAF-YAGLRRPH-----------EGYEV--------- 125
PG PGP V P Y+P + G++ PH YE+
Sbjct: 565 PGPPGPPAVMPPTPPPQGEYLPDMGLGIDGVKPPHAYGAKKGKNGGPAYEMPAFTAELTA 624
Query: 126 --------LRFDDVVTNVGNAYEAASGKFTCPMPGVYFFAYHVLMRGGDGTSMWADLMKN 177
++F+ ++ N Y +G FTC +PGVY+FAYHV +GG ++W L KN
Sbjct: 625 PFPPVGAPVKFNKLLYNGRQNYNPQTGIFTCEVPGVYYFAYHVHCKGG---NVWVALFKN 681
Query: 178 GQVRASAIAQDADQNYDYASNSVILHLDVGDEVFIKLDGGKVHGGNTNKY--STFSGFII 235
+ + D AS S +L L GD VF+++ + G +Y S+FSG+++
Sbjct: 682 NEPVMYTYDEYKKGFLDQASGSAVLLLRPGDRVFLQMPSEQAAGLYAGQYVHSSFSGYLL 741
Query: 236 YP 237
YP
Sbjct: 742 YP 743
Score = 68.2 bits (165), Expect = 6e-12
Identities = 49/125 (39%), Positives = 56/125 (44%), Gaps = 23/125 (18%)
Query: 18 GPAHYEMLGRCRMVCDPHGPRGP-------GPDGAPASV----PPFPPGAKGEVGRRGKA 66
GP +G P G +GP GP G P P PPGA G G +G+
Sbjct: 357 GPKGDRGMGGVPGALGPRGEKGPIGAPGIGGPPGEPGLPGIPGPMGPPGAIGFPGPKGEG 416
Query: 67 GLRGPPGPPGPRGPPGEPGRPGPP------GPPG----PGPGGVAPAAGY--VPRIAFYA 114
G+ GP GPPGP+G PG G PG P GPPG PGP G AG VP +
Sbjct: 417 GIVGPQGPPGPKGEPGLQGFPGKPGFLGEVGPPGMRGLPGPIGPKGEAGQKGVPGLPGVP 476
Query: 115 GLRRP 119
GL P
Sbjct: 477 GLLGP 481
Score = 66.6 bits (161), Expect = 2e-11
Identities = 41/94 (43%), Positives = 50/94 (53%), Gaps = 12/94 (12%)
Query: 36 GPRGP-GPDGAPASVPPFPPGAKGEVGRRGKAGLRGPPGPPGPRGPPGE-----PGRPGP 89
GP+GP GP G P P PG G+ G +G G +G PGP G RGP G+ PG PG
Sbjct: 194 GPQGPPGPHGLPGIGKPGGPGLPGQPGPKGDRGPKGLPGPQGLRGPKGDKGFGMPGAPGV 253
Query: 90 PGPPG----PGPGGVAPAAGYVPRIAFYAGLRRP 119
GPPG PGP G+ P G P + + G + P
Sbjct: 254 KGPPGMHGPPGPVGL-PGVG-KPGVTGFPGPQGP 285
Score = 66.2 bits (160), Expect = 2e-11
Identities = 41/97 (42%), Positives = 52/97 (53%), Gaps = 20/97 (20%)
Query: 18 GPAHYEMLGRCRMVCDPHGPRGPGPDGAPASVPPFPPGAKGEVGRRGK---AGLRGPPGP 74
GP Y +G+ P PG G P ++ PGAKGE+G++G+ G+ GP GP
Sbjct: 150 GPQGYPGVGK---------PGMPGMPGKPGAMGM--PGAKGEIGQKGEIGPMGIPGPQGP 198
Query: 75 PGPRGPP--GEPGRPGPPGPPGP----GPGGVAPAAG 105
PGP G P G+PG PG PG PGP GP G+ G
Sbjct: 199 PGPHGLPGIGKPGGPGLPGQPGPKGDRGPKGLPGPQG 235
Score = 63.9 bits (154), Expect = 1e-10
Identities = 35/70 (50%), Positives = 38/70 (54%), Gaps = 7/70 (10%)
Query: 37 PRGPGPDGAPASVPPFPPGAKGEVGRRGKAGL------RGPPGPPGPRGPPGEPGRPGPP 90
P PGP G P P PG KG+ G G G +GP G PG GPPGEPG PG P
Sbjct: 339 PGLPGPPGLPGIGKPGFPGPKGDRGMGGVPGALGPRGEKGPIGAPGIGGPPGEPGLPGIP 398
Query: 91 GPPGPGPGGV 100
GP GP PG +
Sbjct: 399 GPMGP-PGAI 407
Score = 62.8 bits (151), Expect = 3e-10
Identities = 40/86 (46%), Positives = 45/86 (52%), Gaps = 16/86 (18%)
Query: 34 PHGPRGPGPDGAPASVPPF--PPGAKGEVGRRGKAGLRGPPGPPGPRGPPGEPGRPGPPG 91
P P PGP G P VP PPG G +G+ G+ G+ G PG PG +G G PG PGPPG
Sbjct: 289 PGAPGEPGPQG-PIGVPGVQGPPGIPG-IGKPGQDGIPGQPGFPGGKGEQGLPGLPGPPG 346
Query: 92 PPG------PGP------GGVAPAAG 105
PG PGP GGV A G
Sbjct: 347 LPGIGKPGFPGPKGDRGMGGVPGALG 372
Score = 60.8 bits (146), Expect = 1e-09
Identities = 38/87 (43%), Positives = 43/87 (49%), Gaps = 15/87 (17%)
Query: 34 PHGPRG-PGPDGAPASVP-------------PFPPGAKGEVGRRGKAGLRGPPGPPGPRG 79
P GP+G PG G P P P G KGE G++G GL G PG GP+G
Sbjct: 424 PPGPKGEPGLQGFPGKPGFLGEVGPPGMRGLPGPIGPKGEAGQKGVPGLPGVPGLLGPKG 483
Query: 80 PPGEPGRPGPPGPPG-PGPGGVAPAAG 105
PG PG G GPPG PG GG + G
Sbjct: 484 EPGIPGDQGLQGPPGIPGIGGPSGPIG 510
Score = 60.5 bits (145), Expect = 1e-09
Identities = 33/72 (45%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Query: 35 HGPRGPGPDGAPASVPPFPPGAKGEVGRRGKAGLRGPPGPPGPRGPPGEPGRPGPPGPPG 94
HGP PGP G P P G G G GK G G PGP GP G PG G PG PG
Sbjct: 260 HGP--PGPVGLPGVGKPGVTGFPGPQGPLGKPGAPGEPGPQGPIGVPGVQGPPGIPGIGK 317
Query: 95 PGPGGVAPAAGY 106
PG G+ G+
Sbjct: 318 PGQDGIPGQPGF 329
Score = 57.4 bits (137), Expect = 1e-08
Identities = 35/75 (46%), Positives = 38/75 (50%), Gaps = 9/75 (12%)
Query: 34 PHGPRGPGPDGAPASV-------PPFPPGAKGEVGRRGKAGLRGPPGPPGPRGPPGEPGR 86
P G +G G GAP PP P G G VG+ G G GP GP G G PGEPG
Sbjct: 239 PKGDKGFGMPGAPGVKGPPGMHGPPGPVGLPG-VGKPGVTGFPGPQGPLGKPGAPGEPGP 297
Query: 87 PGPPGPPG-PGPGGV 100
GP G PG GP G+
Sbjct: 298 QGPIGVPGVQGPPGI 312
Score = 55.8 bits (133), Expect = 3e-08
Identities = 31/64 (48%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 40 PGPDGAPASVPPFPPGAKGEVGRRGKAGLRGPPGPPGPRGPPGEPGRPGPPGPPG-PG-- 96
PGP G P P PG G+ G G G +G G G GP G PG GPPGP G PG
Sbjct: 149 PGPQGYPGVGKPGMPGMPGKPGAMGMPGAKGEIGQKGEIGPMGIPGPQGPPGPHGLPGIG 208
Query: 97 -PGG 99
PGG
Sbjct: 209 KPGG 212
Score = 55.8 bits (133), Expect = 3e-08
Identities = 34/71 (47%), Positives = 37/71 (52%), Gaps = 7/71 (9%)
Query: 36 GPRG-PGPDGAPASVPPFPPGAKGEVGRRGKAGLRGPPGPPGPRGPPGEPGRPGPPGPPG 94
GP G PGP G PP P G G +G+ G GL G PGP G RGP G PG G GP G
Sbjct: 188 GPMGIPGPQG-----PPGPHGLPG-IGKPGGPGLPGQPGPKGDRGPKGLPGPQGLRGPKG 241
Query: 95 PGPGGVAPAAG 105
G+ A G
Sbjct: 242 DKGFGMPGAPG 252
Score = 53.5 bits (127), Expect = 2e-07
Identities = 35/74 (47%), Positives = 40/74 (54%), Gaps = 15/74 (20%)
Query: 36 GPRG-PGPDGAPASVPPFPPGAKGEVGRRGKAGLRGPPGPPGPRGPPGEPGRPGPPGPPG 94
GPRG PGP G PP PPG G G+ G G PGP+G PG G+PG PG PG
Sbjct: 121 GPRGEPGPRG-----PPGPPGLPGH-------GIPGIKGKPGPQGYPG-VGKPGMPGMPG 167
Query: 95 -PGPGGVAPAAGYV 107
PG G+ A G +
Sbjct: 168 KPGAMGMPGAKGEI 181
Score = 51.6 bits (122), Expect = 6e-07
Identities = 37/85 (43%), Positives = 39/85 (45%), Gaps = 14/85 (16%)
Query: 34 PHGPRGPGPDGAPASVPPFPPGAKG--EVGRRGKAGLRGPPGPPGPRGPPGE------PG 85
P P G G G P P PPG G + G G G RG G PG GP GE PG
Sbjct: 327 PGFPGGKGEQGLPGL--PGPPGLPGIGKPGFPGPKGDRGMGGVPGALGPRGEKGPIGAPG 384
Query: 86 RPGPPGPPG----PGPGGVAPAAGY 106
GPPG PG PGP G A G+
Sbjct: 385 IGGPPGEPGLPGIPGPMGPPGAIGF 409
Score = 49.3 bits (116), Expect = 3e-06
Identities = 25/51 (49%), Positives = 28/51 (54%), Gaps = 8/51 (15%)
Query: 63 RGKAGLRGPPGPPGPRGPPGEP--------GRPGPPGPPGPGPGGVAPAAG 105
RG+ G RG PGP GP GPPG P G+PGP G PG G G+ G
Sbjct: 117 RGEQGPRGEPGPRGPPGPPGLPGHGIPGIKGKPGPQGYPGVGKPGMPGMPG 167
Score = 45.4 bits (106), Expect = 4e-05
Identities = 27/62 (43%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
Query: 49 VPPFPPGAKGEVGRRGK----AGLRGPPGPPGPRGPPGEPGRPGPPGPPGPGPGGVAPAA 104
+ P P K V ++GK A LRG GP G GP G PG PG PG PG G
Sbjct: 93 IQPAPRMGKEAVPKKGKEIPLASLRGEQGPRGEPGPRGPPGPPGLPGHGIPGIKGKPGPQ 152
Query: 105 GY 106
GY
Sbjct: 153 GY 154
>gi|18105032 type X collagen alpha 1 precursor [Homo sapiens]
Length = 680
Score = 133 bits (335), Expect = 1e-31
Identities = 86/234 (36%), Positives = 119/234 (50%), Gaps = 37/234 (15%)
Query: 34 PHGPRG----PGPDGAPASVPPFPPGAKGEVGRRGKAGLRGPPGPPGPRGPPGEPGRPGP 89
P GP G PG G P S P PPG G + +G G GPPGPPGPRG GEPG PGP
Sbjct: 453 PIGPPGIPGFPGSKGDPGS--PGPPGPAG-IATKGLNGPTGPPGPPGPRGHSGEPGLPGP 509
Query: 90 PGPPGPGPG-----------GVAPAAGYVPRIAFYAGLR-RPHEGYEV------------ 125
PGPPGP PG G P+ P ++ G+ P + V
Sbjct: 510 PGPPGP-PGQAVMPEGFIKAGQRPSLSGTPLVSANQGVTGMPVSAFTVILSKAYPAIGTP 568
Query: 126 LRFDDVVTNVGNAYEAASGKFTCPMPGVYFFAYHVLMRGGDGTSMWADLMKNGQVRASAI 185
+ FD ++ N Y+ +G FTC +PG+Y+F+YHV ++ GT +W L KNG
Sbjct: 569 IPFDKILYNRQQHYDPRTGIFTCQIPGIYYFSYHVHVK---GTHVWVGLYKNGTPVMYTY 625
Query: 186 AQDADQNYDYASNSVILHLDVGDEVFIKLDGGKVHGGNTNKY--STFSGFIIYP 237
+ D AS S I+ L D+V+++L + +G +++Y S+FSGF++ P
Sbjct: 626 DEYTKGYLDQASGSAIIDLTENDQVWLQLPNAESNGLYSSEYVHSSFSGFLVAP 679
Score = 67.8 bits (164), Expect = 8e-12
Identities = 40/87 (45%), Positives = 43/87 (49%), Gaps = 19/87 (21%)
Query: 34 PHGPRG-PGPDGAPASVPPFPPGAKGEVGRRG-----------------KAGLRGPPGPP 75
P GPRG PGP G P PG +GE G G K G RGP GP
Sbjct: 67 PAGPRGHPGPSGPPGKPGYGSPGLQGEPGLPGPPGPSAVGKPGVPGLPGKPGERGPYGPK 126
Query: 76 GPRGPPGEPGRPGPPGPPG-PGPGGVA 101
G GP G PG GPPGPPG PGP G++
Sbjct: 127 GDVGPAGLPGPRGPPGPPGIPGPAGIS 153
Score = 67.0 bits (162), Expect = 1e-11
Identities = 38/77 (49%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 37 PRGPGPDGAPASVPPFPPGAKGEVGRRGKAGLRGPPGP---PGPRGPPGEPGRPGPPGPP 93
P PGP G A P PG G+ G RG G +G GP PGPRGPPG PG PGP G
Sbjct: 94 PGLPGPPGPSAVGKPGVPGLPGKPGERGPYGPKGDVGPAGLPGPRGPPGPPGIPGPAGIS 153
Query: 94 GPG-PGGVAPAAGYVPR 109
PG PG P PR
Sbjct: 154 VPGKPGQQGPTGAPGPR 170
Score = 67.0 bits (162), Expect = 1e-11
Identities = 40/91 (43%), Positives = 46/91 (50%), Gaps = 18/91 (19%)
Query: 34 PHGPRG-------PGPDG--APASVPPFP--------PGAKGEVGRRGKAGLRGPPGPPG 76
P GP+G PGP G PA +P PG+ G+ G GK GL GP G PG
Sbjct: 345 PQGPKGIPGSHGLPGPKGETGPAGPAGYPGAKGERGSPGSDGKPGYPGKPGLDGPKGNPG 404
Query: 77 PRGPPGEPGRPGPPGPPGP-GPGGVAPAAGY 106
GP G+PG GPPG PGP GP G G+
Sbjct: 405 LPGPKGDPGVGGPPGLPGPVGPAGAKGMPGH 435
Score = 63.9 bits (154), Expect = 1e-10
Identities = 41/89 (46%), Positives = 44/89 (49%), Gaps = 14/89 (15%)
Query: 31 VCDPHGPRGPGPDGAPA-------SVPPFPPGAKGE---VGRRGKAGLRGPPG---PPGP 77
+ P GP G G G P + P PGAKGE G GK GL GPPG P GP
Sbjct: 289 IAGPPGPPGFGKPGLPGLKGERGPAGLPGGPGAKGEQGPAGLPGKPGLTGPPGNMGPQGP 348
Query: 78 RGPPGEPGRPGPPGPPGP-GPGGVAPAAG 105
+G PG G PGP G GP GP G A G
Sbjct: 349 KGIPGSHGLPGPKGETGPAGPAGYPGAKG 377
Score = 63.5 bits (153), Expect = 1e-10
Identities = 34/71 (47%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 37 PRGPGPDGAPASVPPFPPGAKGE--VGRRGKAGLRGPPGPPGPRGPPGEPGRPGPPGPPG 94
P GP G P P PPG +G +G+ G AG G PG PG +G PG PG GPPGPPG
Sbjct: 240 PGEMGPIGPPG--PQGPPGERGPEGIGKPGAAGAPGQPGIPGTKGLPGAPGIAGPPGPPG 297
Query: 95 PGPGGVAPAAG 105
G G+ G
Sbjct: 298 FGKPGLPGLKG 308
Score = 63.2 bits (152), Expect = 2e-10
Identities = 36/76 (47%), Positives = 40/76 (52%), Gaps = 7/76 (9%)
Query: 34 PHGPRGPGPDGAPASVPPFPPGAKGEVGRRGKAGLRGPPGPPGPRGPPGEPGRPGPPGPP 93
P P GP G P P PG KGE RG AGL G PG G +GP G PG+PG GPP
Sbjct: 284 PGAPGIAGPPGPPGFGKPGLPGLKGE---RGPAGLPGGPGAKGEQGPAGLPGKPGLTGPP 340
Query: 94 G----PGPGGVAPAAG 105
G GP G+ + G
Sbjct: 341 GNMGPQGPKGIPGSHG 356
Score = 61.6 bits (148), Expect = 6e-10
Identities = 35/77 (45%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
Query: 37 PRGPGPDGAPASVPPFPPGAKGEVGRRGKAGLRGPPGPPGPRGPPGEPGRPGPPGPPGP- 95
P PG G P P P VG+RG+ G+ G PG G RG PGE G GPPGP GP
Sbjct: 196 PGRPGERGLPGPQGPTGPSGPPGVGKRGENGVPGQPGIKGDRGFPGEMGPIGPPGPQGPP 255
Query: 96 ---GPGGVA-PAAGYVP 108
GP G+ P A P
Sbjct: 256 GERGPEGIGKPGAAGAP 272
Score = 61.2 bits (147), Expect = 7e-10
Identities = 43/110 (39%), Positives = 53/110 (48%), Gaps = 25/110 (22%)
Query: 4 LLLVAIPLLVHSSRGPAHYEMLGRCRMVCDPHGPRGPGPDGAPASVPPFPPGAKGEVGRR 63
LLLV++ L VH Y+M P G +GP P+ P+ +KG + R
Sbjct: 8 LLLVSLNL-VHGVFYAERYQM---------PTGIKGPLPNTKTQFFIPYTIKSKG-IAVR 56
Query: 64 GKAGLRGPPGP------PGPRGPPGEP--------GRPGPPGPPGPGPGG 99
G+ G GPPGP PGP GPPG+P G PG PGPPGP G
Sbjct: 57 GEQGTPGPPGPAGPRGHPGPSGPPGKPGYGSPGLQGEPGLPGPPGPSAVG 106
Score = 61.2 bits (147), Expect = 7e-10
Identities = 38/75 (50%), Positives = 41/75 (54%), Gaps = 12/75 (16%)
Query: 36 GPRGPGPDGAPASVPPFP--PGAKGEVGRRGK---AGLRGPPGPPGPRGPPGE-----PG 85
GP GP G P VP P PG +G G +G AGL GP GPPGP G PG PG
Sbjct: 98 GPPGPSAVGKPG-VPGLPGKPGERGPYGPKGDVGPAGLPGPRGPPGPPGIPGPAGISVPG 156
Query: 86 RPGPPGPPG-PGPGG 99
+PG GP G PGP G
Sbjct: 157 KPGQQGPTGAPGPRG 171
Score = 60.5 bits (145), Expect = 1e-09
Identities = 39/83 (46%), Positives = 45/83 (54%), Gaps = 13/83 (15%)
Query: 36 GPRGP-GPDGAPA------SVPPFPPGAKGEVGRRGKAGLRGPPGPPGP---RGPP--GE 83
GP+GP GP G P + P PG KG+ G G+ G GPPGP GP RGP G+
Sbjct: 206 GPQGPTGPSGPPGVGKRGENGVPGQPGIKGDRGFPGEMGPIGPPGPQGPPGERGPEGIGK 265
Query: 84 PGRPGPPGPPG-PGPGGVAPAAG 105
PG G PG PG PG G+ A G
Sbjct: 266 PGAAGAPGQPGIPGTKGLPGAPG 288
Score = 59.3 bits (142), Expect = 3e-09
Identities = 41/91 (45%), Positives = 43/91 (47%), Gaps = 29/91 (31%)
Query: 36 GPRG-PGPDGAPASVPPFPPGAKGEVG-----RRGKAGLRGPPGPPGPRGPPGE------ 83
GPRG PG GAP P G KGE+G R G+ GL GP GP GP GPPG
Sbjct: 168 GPRGFPGEKGAPGV--PGMNGQKGEMGYGAPGRPGERGLPGPQGPTGPSGPPGVGKRGEN 225
Query: 84 --------------PGRPGPPGPPGP-GPGG 99
PG GP GPPGP GP G
Sbjct: 226 GVPGQPGIKGDRGFPGEMGPIGPPGPQGPPG 256
Score = 57.8 bits (138), Expect = 8e-09
Identities = 34/74 (45%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
Query: 36 GPRG-PGPDGAPASVPPFPPGAKGEVGRRGKAGLRGP---PGPPGPRGPPGEPGRPGPPG 91
G RG PGP G P G +GE G G+ G++G PG GP GPPG G PG G
Sbjct: 200 GERGLPGPQGPTGPSGPPGVGKRGENGVPGQPGIKGDRGFPGEMGPIGPPGPQGPPGERG 259
Query: 92 PPGPGPGGVAPAAG 105
P G G G A A G
Sbjct: 260 PEGIGKPGAAGAPG 273
Score = 57.4 bits (137), Expect = 1e-08
Identities = 41/98 (41%), Positives = 44/98 (44%), Gaps = 31/98 (31%)
Query: 34 PHGPRGP-GPDGAPASV-PPFPPGAKGEVGRR--GKAGLRGPPGPPGPRG------PPGE 83
P+GP+G GP G P PP PPG G G GK G +GP G PGPRG PG
Sbjct: 122 PYGPKGDVGPAGLPGPRGPPGPPGIPGPAGISVPGKPGQQGPTGAPGPRGFPGEKGAPGV 181
Query: 84 PGR--------------------PGPPGPPGP-GPGGV 100
PG PGP GP GP GP GV
Sbjct: 182 PGMNGQKGEMGYGAPGRPGERGLPGPQGPTGPSGPPGV 219
Score = 53.5 bits (127), Expect = 2e-07
Identities = 36/87 (41%), Positives = 38/87 (43%), Gaps = 3/87 (3%)
Query: 34 PHGPRGP-GPDGAPASVPPFPPGAKGEVGRRGKAGLRGPPGPPGPRGPPGEPGRPGPPGP 92
P G GP GP G P S PG KGE G G AG G G G G G+PG PG PG
Sbjct: 339 PPGNMGPQGPKGIPGSHGL--PGPKGETGPAGPAGYPGAKGERGSPGSDGKPGYPGKPGL 396
Query: 93 PGPGPGGVAPAAGYVPRIAFYAGLRRP 119
GP P P + GL P
Sbjct: 397 DGPKGNPGLPGPKGDPGVGGPPGLPGP 423
Score = 49.3 bits (116), Expect = 3e-06
Identities = 32/77 (41%), Positives = 35/77 (45%), Gaps = 7/77 (9%)
Query: 36 GPRGP-GPDGAPASVPPFPPGAKGEVGRRGKAGLRGPPGPPGPRGPPGEPGRP--GPPGP 92
GP GP GP G P P G G G G+ G+ G G PG G G PG P G PG
Sbjct: 244 GPIGPPGPQGPPGERGPEGIGKPGAAGAPGQPGIPGTKGLPGAPGIAGPPGPPGFGKPGL 303
Query: 93 PG----PGPGGVAPAAG 105
PG GP G+ G
Sbjct: 304 PGLKGERGPAGLPGGPG 320
Score = 48.5 bits (114), Expect = 5e-06
Identities = 33/80 (41%), Positives = 36/80 (45%), Gaps = 16/80 (20%)
Query: 36 GPRGPGPDGAPASVPPFPPGAKGEVGRRGKAGLRGP-----PGPPGPRGPPGEPGR---P 87
GP GP D PA +P G G G G+ GP PG PG +GP G PG P
Sbjct: 121 GPYGPKGDVGPAGLP-------GPRGPPGPPGIPGPAGISVPGKPGQQGPTGAPGPRGFP 173
Query: 88 GPPGPPG-PGPGGVAPAAGY 106
G G PG PG G GY
Sbjct: 174 GEKGAPGVPGMNGQKGEMGY 193
>gi|87298828 complement component 1, q subcomponent, B chain
precursor [Homo sapiens]
Length = 253
Score = 130 bits (328), Expect = 8e-31
Identities = 90/250 (36%), Positives = 125/250 (50%), Gaps = 24/250 (9%)
Query: 2 VLLLLVAIPLLVHSSRGPAHYEMLGRCRMVCDPHGPRGPGPDGAPASVP-------PFPP 54
VL+LL+ + L+ S A G + P P PGPDG P + P
Sbjct: 12 VLMLLLLLGLIDISQ---AQLSCTGPPAIPGIPGIPGTPGPDGQPGTPGIKGEKGLPGLA 68
Query: 55 GAKGEVGRRGKAGLRGPPGPPGPRGPPGEPGRPGPPGPPGP-GPGGVAPAAGYVPRIAFY 113
G GE G +G G+ G PG GP+GP G G PG PG PGP G G A +IAF
Sbjct: 69 GDHGEFGEKGDPGIPGNPGKVGPKGPMGPKGGPGAPGAPGPKGESGDYKAT---QKIAFS 125
Query: 114 AG--LRRPHEGYEVLRFDDVVTNVGNAYEAASGKFTCPMPGVYFFAYHVLMRGGDGTSMW 171
A + P + +RFD V+TN+ N YE SGKFTC +PG+Y+F YH RG ++
Sbjct: 126 ATRTINVPLRRDQTIRFDHVITNMNNNYEPRSGKFTCKVPGLYYFTYHASSRG----NLC 181
Query: 172 ADLMKNGQVRASAIAQDADQNYD---YASNSVILHLDVGDEVFIKLDGGKVHGGNTNKYS 228
+LM+ G+ RA + D Y+ + ++L L+ G+ VF++ G S
Sbjct: 182 VNLMR-GRERAQKVVTFCDYAYNTFQVTTGGMVLKLEQGENVFLQATDKNSLLGMEGANS 240
Query: 229 TFSGFIIYPD 238
FSGF+++PD
Sbjct: 241 IFSGFLLFPD 250
>gi|56786155 complement component 1, q subcomponent, C chain
precursor [Homo sapiens]
Length = 245
Score = 121 bits (303), Expect = 6e-28
Identities = 85/246 (34%), Positives = 121/246 (49%), Gaps = 24/246 (9%)
Query: 2 VLLLLVAIPLLVHSSRGPAHYEMLGRCRMVCDPHGPRGPGPDGAPA--SVPPFP--PGAK 57
+LLLL+ +PL RG A+ G M P P G DG P P P PG +
Sbjct: 15 LLLLLLLLPL-----RGQANTGCYGIPGMPGLPGAPGKDGYDGLPGPKGEPGIPAIPGIR 69
Query: 58 GEVGRRGKAGLRGPPGPPGPRGPPGEPGRPGPPGPPG-PGPGGVAPAAGYVPRI-AFYAG 115
G G++G+ GL G PG GP GPPG PG PGP G PG PG G Y + + +
Sbjct: 70 GPKGQKGEPGLPGHPGKNGPMGPPGMPGVPGPMGIPGEPGEEG-----RYKQKFQSVFTV 124
Query: 116 LRRPHE---GYEVLRFDDVVTNVGNAYEAASGKFTCPMPGVYFFAYHVLMRGGDGTSMWA 172
R+ H+ ++RF+ V+TN Y+ ++GKFTC +PG+Y+F YH T+
Sbjct: 125 TRQTHQPPAPNSLIRFNAVLTNPQGDYDTSTGKFTCKVPGLYYFVYH-----ASHTANLC 179
Query: 173 DLMKNGQVRASAIAQDADQNYDYASNSVILHLDVGDEVFIKLDGGKVHGGNTNKYSTFSG 232
L+ V+ + S V+L L VG+EV++ ++ G S FSG
Sbjct: 180 VLLYRSGVKVVTFCGHTSKTNQVNSGGVLLRLQVGEEVWLAVNDYYDMVGIQGSDSVFSG 239
Query: 233 FIIYPD 238
F+++PD
Sbjct: 240 FLLFPD 245
>gi|166235903 complement component 1, q subcomponent, C chain
precursor [Homo sapiens]
Length = 245
Score = 121 bits (303), Expect = 6e-28
Identities = 85/246 (34%), Positives = 121/246 (49%), Gaps = 24/246 (9%)
Query: 2 VLLLLVAIPLLVHSSRGPAHYEMLGRCRMVCDPHGPRGPGPDGAPA--SVPPFP--PGAK 57
+LLLL+ +PL RG A+ G M P P G DG P P P PG +
Sbjct: 15 LLLLLLLLPL-----RGQANTGCYGIPGMPGLPGAPGKDGYDGLPGPKGEPGIPAIPGIR 69
Query: 58 GEVGRRGKAGLRGPPGPPGPRGPPGEPGRPGPPGPPG-PGPGGVAPAAGYVPRI-AFYAG 115
G G++G+ GL G PG GP GPPG PG PGP G PG PG G Y + + +
Sbjct: 70 GPKGQKGEPGLPGHPGKNGPMGPPGMPGVPGPMGIPGEPGEEG-----RYKQKFQSVFTV 124
Query: 116 LRRPHE---GYEVLRFDDVVTNVGNAYEAASGKFTCPMPGVYFFAYHVLMRGGDGTSMWA 172
R+ H+ ++RF+ V+TN Y+ ++GKFTC +PG+Y+F YH T+
Sbjct: 125 TRQTHQPPAPNSLIRFNAVLTNPQGDYDTSTGKFTCKVPGLYYFVYH-----ASHTANLC 179
Query: 173 DLMKNGQVRASAIAQDADQNYDYASNSVILHLDVGDEVFIKLDGGKVHGGNTNKYSTFSG 232
L+ V+ + S V+L L VG+EV++ ++ G S FSG
Sbjct: 180 VLLYRSGVKVVTFCGHTSKTNQVNSGGVLLRLQVGEEVWLAVNDYYDMVGIQGSDSVFSG 239
Query: 233 FIIYPD 238
F+++PD
Sbjct: 240 FLLFPD 245
>gi|32964830 collagen, type VIII, alpha 2 [Homo sapiens]
Length = 703
Score = 121 bits (303), Expect = 6e-28
Identities = 84/234 (35%), Positives = 114/234 (48%), Gaps = 34/234 (14%)
Query: 34 PHGPRG-PGPDGAPASVPPFPPGAKGEVGRRGKAGLRGPPGPPGPRGPPGEPGRPGPPGP 92
P GP+G PG G P P G GE G G G G PG PG GPPG PG PGPPG
Sbjct: 473 PIGPQGLPGLKGEPGLPGPPGEGRAGEPGTAGPTGPPGVPGSPGITGPPGPPGPPGPPGA 532
Query: 93 PGP--------------GPGGVAPAAGYVPRI-----------AFYAGLRRPHEGYEV-L 126
PG G G G P+ AF A L P + +
Sbjct: 533 PGAFDETGIAGLHLPNGGVEGAVLGKGGKPQFGLGELSAHATPAFTAVLTSPFPASGMPV 592
Query: 127 RFDDVVTNVGNAYEAASGKFTCPMPGVYFFAYHVLMRGGDGTSMWADLMKNGQVRASAIA 186
+FD + N + Y A+G FTCP+ GVY+FAYHV ++ GT++W L KN V A+
Sbjct: 593 KFDRTLYNGHSGYNPATGIFTCPVGGVYYFAYHVHVK---GTNVWVALYKN-NVPATYTY 648
Query: 187 QDADQNY-DYASNSVILHLDVGDEVFIKLDGGKVHGGNTNKY--STFSGFIIYP 237
+ + Y D AS +L L D+V++++ + +G + +Y S+FSGF++ P
Sbjct: 649 DEYKKGYLDQASGGAVLQLRPNDQVWVQMPSDQANGLYSTEYIHSSFSGFLLCP 702
Score = 65.1 bits (157), Expect = 5e-11
Identities = 38/88 (43%), Positives = 43/88 (48%), Gaps = 17/88 (19%)
Query: 35 HGPRGP-GPDGAPASVP-PFPPGAKGEVGRRGKAGL---------------RGPPGPPGP 77
HGP GP GP G P P PG G +G++G GL +GP GP GP
Sbjct: 417 HGPPGPTGPKGEPGFTGRPGGPGVAGALGQKGDLGLPGQPGLRGPSGIPGLQGPAGPIGP 476
Query: 78 RGPPGEPGRPGPPGPPGPGPGGVAPAAG 105
+G PG G PG PGPPG G G AG
Sbjct: 477 QGLPGLKGEPGLPGPPGEGRAGEPGTAG 504
Score = 64.3 bits (155), Expect = 9e-11
Identities = 46/124 (37%), Positives = 50/124 (40%), Gaps = 54/124 (43%)
Query: 36 GPRGP---------GPDGAPASV-PPFPPGAKGEVGRRGKAGLRGPPGPPG--------- 76
GP GP GP G P V PP PG +GE G RG GLRGPPGPPG
Sbjct: 112 GPAGPPGFSRMGKAGPPGLPGKVGPPGQPGLRGEPGIRGDQGLRGPPGPPGLPGPSGITI 171
Query: 77 --------------------PRGPPGEP-----------GRPGPPGPPG----PGPGGVA 101
P+G PG P G+PG PG PG PGP G+
Sbjct: 172 PGKPGAQGVPGPPGFQGEPGPQGEPGPPGDRGLKGDNGVGQPGLPGAPGQGGAPGPPGLP 231
Query: 102 PAAG 105
AG
Sbjct: 232 GPAG 235
Score = 63.9 bits (154), Expect = 1e-10
Identities = 37/76 (48%), Positives = 38/76 (50%), Gaps = 6/76 (7%)
Query: 36 GPRGPGPDGAPASVPPF-----PPGAKGEVGRRGKAGLRGPPGPPGPRGPPGEPGRPGPP 90
G GP D PA VP PG GE G +G GL GPPG PG G PG G PGP
Sbjct: 319 GLPGPKGDRGPAGVPGLLGDRGEPGEDGEPGEQGPQGLGGPPGLPGSAGLPGRRGPPGPK 378
Query: 91 GPPGP-GPGGVAPAAG 105
G GP GP GV G
Sbjct: 379 GEAGPGGPPGVPGIRG 394
Score = 63.5 bits (153), Expect = 1e-10
Identities = 39/78 (50%), Positives = 41/78 (52%), Gaps = 10/78 (12%)
Query: 36 GPRGP-GPDGAPASVPPFPPGAKGEVGRRGKAGLRGPPGPPGPRGPPGEPGRPGPPGPPG 94
G RGP GP G P PPG G G +G +GL G PG PG RG PG G PGP GP G
Sbjct: 370 GRRGPPGPKGEAG--PGGPPGVPGIRGDQGPSGLAGKPGVPGERGLPGAHGPPGPTGPKG 427
Query: 95 -------PGPGGVAPAAG 105
PG GVA A G
Sbjct: 428 EPGFTGRPGGPGVAGALG 445
Score = 63.2 bits (152), Expect = 2e-10
Identities = 36/80 (45%), Positives = 41/80 (51%), Gaps = 13/80 (16%)
Query: 34 PHGPRG-PGPDGAPASVPPFPPGAKGEVGRRGKAGLRGPPGPPGPR-----------GPP 81
P GP G PGP G P G G G +G+ G +G PGPPG R G P
Sbjct: 157 PPGPPGLPGPSGITIPGKPGAQGVPGPPGFQGEPGPQGEPGPPGDRGLKGDNGVGQPGLP 216
Query: 82 GEPGRPGPPGPPG-PGPGGV 100
G PG+ G PGPPG PGP G+
Sbjct: 217 GAPGQGGAPGPPGLPGPAGL 236
Score = 63.2 bits (152), Expect = 2e-10
Identities = 40/81 (49%), Positives = 42/81 (51%), Gaps = 9/81 (11%)
Query: 31 VCDPHGPRGPGPDGAPASVPPFPPGAKGEVGRRGKAGLRGPPG------PPGPRGPPGEP 84
V P P PG GAP PP PG G +G+ G GL G PG PPG GP GEP
Sbjct: 210 VGQPGLPGAPGQGGAPG--PPGLPGPAG-LGKPGLDGLPGAPGDKGESGPPGVPGPRGEP 266
Query: 85 GRPGPPGPPGPGPGGVAPAAG 105
G GP GPPG GV AAG
Sbjct: 267 GAVGPKGPPGVDGVGVPGAAG 287
Score = 62.8 bits (151), Expect = 3e-10
Identities = 43/96 (44%), Positives = 45/96 (46%), Gaps = 23/96 (23%)
Query: 36 GPRGP-GPDGAPASVPPFPPGAKGEVG--------RRGKAGLRGPPGPPGPRGPPGEPGR 86
GPRGP GP G P PG G+ G R GKAG G PG GP G PG G
Sbjct: 86 GPRGPPGPPGFPGKPGMGKPGLHGQPGPAGPPGFSRMGKAGPPGLPGKVGPPGQPGLRGE 145
Query: 87 P---------GPPGPPG-PGPGGVA----PAAGYVP 108
P GPPGPPG PGP G+ P A VP
Sbjct: 146 PGIRGDQGLRGPPGPPGLPGPSGITIPGKPGAQGVP 181
Score = 62.8 bits (151), Expect = 3e-10
Identities = 40/78 (51%), Positives = 42/78 (53%), Gaps = 9/78 (11%)
Query: 36 GPRG-PGPDGAPASV-PPFPPGAKGEVGRRGKAGLRGPPGPPGPRGPPGEPGRPGPPGPP 93
GP G PGP G P +V P PPG G VG G AGL GP GP G +G PG G PG GP
Sbjct: 255 GPPGVPGPRGEPGAVGPKGPPGVDG-VGVPGAAGLPGPQGPSGAKGEPGTRGPPGLIGPT 313
Query: 94 G------PGPGGVAPAAG 105
G PGP G AG
Sbjct: 314 GYGMPGLPGPKGDRGPAG 331
Score = 62.4 bits (150), Expect = 3e-10
Identities = 32/66 (48%), Positives = 32/66 (48%)
Query: 40 PGPDGAPASVPPFPPGAKGEVGRRGKAGLRGPPGPPGPRGPPGEPGRPGPPGPPGPGPGG 99
PGP G P PG G G G G GPPG PGPRG PG G GPPG G G G
Sbjct: 225 PGPPGLPGPAGLGKPGLDGLPGAPGDKGESGPPGVPGPRGEPGAVGPKGPPGVDGVGVPG 284
Query: 100 VAPAAG 105
A G
Sbjct: 285 AAGLPG 290
Score = 61.2 bits (147), Expect = 7e-10
Identities = 36/79 (45%), Positives = 40/79 (50%), Gaps = 7/79 (8%)
Query: 35 HGPRGP-GPDGAPASVPPFPPGAKGEVGRRGKAGLRGPPGPPGPRGPPGEPGRPGPPGPP 93
HG GP GP G PPG G+VG G+ GLRG PG G +G G PG PG PGP
Sbjct: 108 HGQPGPAGPPGFSRMGKAGPPGLPGKVGPPGQPGLRGEPGIRGDQGLRGPPGPPGLPGPS 167
Query: 94 G------PGPGGVAPAAGY 106
G PG GV G+
Sbjct: 168 GITIPGKPGAQGVPGPPGF 186
Score = 60.8 bits (146), Expect = 1e-09
Identities = 43/99 (43%), Positives = 45/99 (45%), Gaps = 29/99 (29%)
Query: 34 PHGPRG------PGPDGAPASVPPFPPGAKGEVGRRGKAGLRGP--------PGPPGPRG 79
P GP G PG G P P P GAKGE G RG GL GP PGP G RG
Sbjct: 271 PKGPPGVDGVGVPGAAGLPG--PQGPSGAKGEPGTRGPPGLIGPTGYGMPGLPGPKGDRG 328
Query: 80 P------------PGEPGRPGPPGPPG-PGPGGVAPAAG 105
P PGE G PG GP G GP G+ +AG
Sbjct: 329 PAGVPGLLGDRGEPGEDGEPGEQGPQGLGGPPGLPGSAG 367
Score = 60.5 bits (145), Expect = 1e-09
Identities = 39/89 (43%), Positives = 42/89 (47%), Gaps = 23/89 (25%)
Query: 36 GPRG---PGPDGAPASVPPFPPGAKGEVGRRGKAGLRGPPGPPGPRGPP-----GEPGRP 87
GP G PG DG P + PG KGE G G G RG PG GP+GPP G PG
Sbjct: 232 GPAGLGKPGLDGLPGA-----PGDKGESGPPGVPGPRGEPGAVGPKGPPGVDGVGVPGAA 286
Query: 88 GPPGPPGP----------GPGGVAPAAGY 106
G PGP GP GP G+ GY
Sbjct: 287 GLPGPQGPSGAKGEPGTRGPPGLIGPTGY 315
Score = 58.9 bits (141), Expect = 4e-09
Identities = 39/94 (41%), Positives = 39/94 (41%), Gaps = 20/94 (21%)
Query: 32 CDPHGPRGPGPDGAPASVPP--FPPGAKGEVG---RRGKA---------------GLRGP 71
C P G G GA P P KG VG R GK G GP
Sbjct: 22 CGPRASSGGGAGGAAGYAPVKYIQPMQKGPVGPPFREGKGQYLEMPLPLLPMDLKGEPGP 81
Query: 72 PGPPGPRGPPGEPGRPGPPGPPGPGPGGVAPAAG 105
PG PGPRGPPG PG PG PG PG G AG
Sbjct: 82 PGKPGPRGPPGPPGFPGKPGMGKPGLHGQPGPAG 115
Score = 57.8 bits (138), Expect = 8e-09
Identities = 36/82 (43%), Positives = 38/82 (46%), Gaps = 12/82 (14%)
Query: 36 GPRG-PGPDGAPASVPPF----PPGAKGEVGRRGKAGLRGPPGPPGPRGPPGEPGRPGPP 90
G RG PG DG P P PPG G G G+ G GP G GP GPPG PG G
Sbjct: 337 GDRGEPGEDGEPGEQGPQGLGGPPGLPGSAGLPGRRGPPGPKGEAGPGGPPGVPGIRGDQ 396
Query: 91 GPPG-------PGPGGVAPAAG 105
GP G PG G+ A G
Sbjct: 397 GPSGLAGKPGVPGERGLPGAHG 418
Score = 57.4 bits (137), Expect = 1e-08
Identities = 42/90 (46%), Positives = 45/90 (50%), Gaps = 13/90 (14%)
Query: 33 DPHGPRGPGPDGAPASVPPFPPGAKGEVGRRGKAGLRGPPGPPGPRGPPG--EPGRPGPP 90
+P P PGP G PP PPG G+ G GK GL G PGP GPPG G+ GPP
Sbjct: 78 EPGPPGKPGPRG-----PPGPPGFPGKPGM-GKPGLHGQPGP---AGPPGFSRMGKAGPP 128
Query: 91 GPPGP-GPGGVAPAAGYVPRIAFYAGLRRP 119
G PG GP G P P I GLR P
Sbjct: 129 GLPGKVGPPG-QPGLRGEPGIRGDQGLRGP 157
Score = 47.0 bits (110), Expect = 1e-05
Identities = 31/96 (32%), Positives = 36/96 (37%), Gaps = 24/96 (25%)
Query: 34 PHGPRGPGPDGAPASVP-----------------------PFPPGAKGEVGRRGKAGLRG 70
P GP+G G P VP P G G G +G+ G G
Sbjct: 374 PPGPKGEAGPGGPPGVPGIRGDQGPSGLAGKPGVPGERGLPGAHGPPGPTGPKGEPGFTG 433
Query: 71 PPGPPGPRGPPGEPGRPGPPGPPG-PGPGGVAPAAG 105
PG PG G G+ G G PG PG GP G+ G
Sbjct: 434 RPGGPGVAGALGQKGDLGLPGQPGLRGPSGIPGLQG 469
>gi|94818738 C1q and tumor necrosis factor related protein 2 [Homo
sapiens]
Length = 330
Score = 117 bits (294), Expect = 7e-27
Identities = 82/254 (32%), Positives = 121/254 (47%), Gaps = 46/254 (18%)
Query: 26 GRCRMVCDPHGPRGP-GPDGAPASV----------------------------PPFPPGA 56
G ++VC GP+GP GP GAP PP G
Sbjct: 75 GSPQLVCSLPGPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPPGRTGN 134
Query: 57 KGEVGRRGKAGLRGPPGPPGPRGPPGEPGRPGPPGPPGPG--------PGGVAPAAGYVP 108
+G+ G +GKAG G GP GP+G G PG+ G PG GP PG + +G+
Sbjct: 135 RGKPGPKGKAGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPGLPGPCSCGSGHT- 193
Query: 109 RIAFYAGLRRPHEGYEV-LRFDDVVTNVGNAYEAASGKFTCPMPGVYFFAYHVLMRGGDG 167
+ AF + + + + ++FD ++ N G Y A+SGKF C +PG+Y+F Y + +
Sbjct: 194 KSAFSVAVTKSYPRERLPIKFDKILMNEGGHYNASSGKFVCGVPGIYYFTYDITLA---N 250
Query: 168 TSMWADLMKNGQVRASAIAQDADQNYDYASNSVILHLDVGDEVFIKLDGGKVHGGNTNKY 227
+ L+ NGQ R + N+D AS S IL L GDEV++++ + +G + Y
Sbjct: 251 KHLAIGLVHNGQYRIRTFDANTG-NHDVASGSTILALKQGDEVWLQIFYSEQNGLFYDPY 309
Query: 228 ---STFSGFIIYPD 238
S F+GF+IY D
Sbjct: 310 WTDSLFTGFLIYAD 323
>gi|4757760 adiponectin precursor [Homo sapiens]
Length = 244
Score = 116 bits (291), Expect = 1e-26
Identities = 79/214 (36%), Positives = 110/214 (51%), Gaps = 27/214 (12%)
Query: 37 PRGPGPDGAPASVPPFPPGAKGEVGRRGKAGLRGPPGPPGPRGPPGEPGRPGPPGPPG-- 94
P PG +GAP G G G G+ G +G PG GP+G GE G PG GP G
Sbjct: 44 PGHPGHNGAP--------GRDGRDGTPGEKGEKGDPGLIGPKGDIGETGVPGAEGPRGFP 95
Query: 95 --PGPGGVAPAAGYVPRIAFYAGLRRPHEGYEVL-----RFDDVVTNVGNAYEAASGKFT 147
G G YV R AF GL E Y + RF + N N Y+ ++GKF
Sbjct: 96 GIQGRKGEPGEGAYVYRSAFSVGL----ETYVTIPNMPIRFTKIFYNQQNHYDGSTGKFH 151
Query: 148 CPMPGVYFFAYHVLMRGGDGTSMWADLMKNGQVRASAIAQDADQNYDYASNSVILHLDVG 207
C +PG+Y+FAYH+ + D + L K + Q + N D AS SV+LHL+VG
Sbjct: 152 CNIPGLYYFAYHITVYMKD---VKVSLFKKDKAMLFTYDQYQENNVDQASGSVLLHLEVG 208
Query: 208 DEVFIKLDG-GKVHG--GNTNKYSTFSGFIIYPD 238
D+V++++ G G+ +G + + STF+GF++Y D
Sbjct: 209 DQVWLQVYGEGERNGLYADNDNDSTFTGFLLYHD 242
>gi|7705753 complement component 1, q subcomponent, A chain
precursor [Homo sapiens]
Length = 245
Score = 113 bits (282), Expect = 2e-25
Identities = 77/201 (38%), Positives = 101/201 (50%), Gaps = 19/201 (9%)
Query: 54 PGAKGEVG-------RRGKAGLRGPPGPPGPRGPPGEPGRPGPPGPPG----PGPGGVAP 102
PG KGE G R G GL+G G PGP G PG+ G PGP GP G PG G
Sbjct: 45 PGLKGEQGEPGAPGIRTGIQGLKGDQGEPGPSGNPGKVGYPGPSGPLGARGIPGIKGTKG 104
Query: 103 AAGYV---PRIAFYAGLRRPHEGYEVLRFDDVVTNVGNAYEAASGKFTCPMPGVYFFAYH 159
+ G + PR AF A R P G V+ FD V+TN Y+ SG+F C +PG Y+F +
Sbjct: 105 SPGNIKDQPRPAFSAIRRNPPMGGNVVIFDTVITNQEEPYQNHSGRFVCTVPGYYYFTFQ 164
Query: 160 VLMRGGDGTSMWADLMKNGQVRASAIAQDADQN--YDYASNSVILHLDVGDEVFIKLDGG 217
VL + S+ + GQVR S D + S ++L L GD+V+++ D
Sbjct: 165 VLSQWEICLSIVSS--SRGQVRRSLGFCDTTNKGLFQVVSGGMVLQLQQGDQVWVEKDPK 222
Query: 218 KVH-GGNTNKYSTFSGFIIYP 237
K H + S FSGF+I+P
Sbjct: 223 KGHIYQGSEADSVFSGFLIFP 243
>gi|14149712 C1q and tumor necrosis factor related protein 5
precursor [Homo sapiens]
Length = 243
Score = 113 bits (282), Expect = 2e-25
Identities = 79/212 (37%), Positives = 105/212 (49%), Gaps = 18/212 (8%)
Query: 40 PGPDGAPASVPPFPPGAKGEVGRRGKAGLRGPPGPPGPRGPPGEPGRPGPPGPPGP---- 95
PG G P + P G++G GR G+ G G PG PG +G G PG PGP G PGP
Sbjct: 29 PGHPGLPGT--PGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGRPGLPGPRGDPGPRGEA 86
Query: 96 ---GPGGVAPAAGYVPRIAFYA---GLRRPHEGYEVLRFDDVVTNVGNAYEAASGKFTCP 149
GP G A PR AF A R P L FD V+ N Y+A +GKFTC
Sbjct: 87 GPAGPTGPAGECSVPPRSAFSAKRSESRVPPPSDAPLPFDRVLVNEQGHYDAVTGKFTCQ 146
Query: 150 MPGVYFFAYHVLMRGGDGTSMWADLMKNGQVRASAIAQDADQNYDYA-SNSVILHLDVGD 208
+PGVY+FA H + S+ DL+KNG+ AS + S ++ L+ D
Sbjct: 147 VPGVYYFAVHATVY---RASLQFDLVKNGESIASFFQFFGGWPKPASLSGGAMVRLEPED 203
Query: 209 EVFIKLDGGKVHG--GNTNKYSTFSGFIIYPD 238
+V++++ G G + STFSGF++Y D
Sbjct: 204 QVWVQVGVGDYIGIYASIKTDSTFSGFLVYSD 235
>gi|13994280 C1q and tumor necrosis factor related protein 7 isoform
b [Homo sapiens]
Length = 289
Score = 112 bits (279), Expect = 4e-25
Identities = 84/251 (33%), Positives = 112/251 (44%), Gaps = 46/251 (18%)
Query: 29 RMVCDPHG-PRGPGPDGAPASVPPFP----------PGAKGEVGRRGKAGLRGPPGP--- 74
R +C G P PGP GA S P G KGE G +G AGLRG GP
Sbjct: 31 RYICSIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGL 90
Query: 75 ------------PGPRGPPGEPGRPGPPGPPG----------PGPGGVAPAAGYVPRIAF 112
GP GP GE G GP GPPG PG GV V + AF
Sbjct: 91 AGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGVCRCGSIVLKSAF 150
Query: 113 YAGLRR--PHEGYEVLRFDDVVTNVGNAYEAASGKFTCPMPGVYFFAYHVLMRGGDGTSM 170
G+ P E ++ F+ V+ N G Y A+GKF C PG+Y+F+Y + + +
Sbjct: 151 SVGITTSYPEERLPII-FNKVLFNEGEHYNPATGKFICAFPGIYYFSYDITLA---NKHL 206
Query: 171 WADLMKNGQVRASAIAQDADQNYDYASNSVILHLDVGDEVFIKL---DGGKVHGGNTNKY 227
L+ NGQ R + N+D AS S +++L DEV++++ D +
Sbjct: 207 AIGLVHNGQYRIKTFDANTG-NHDVASGSTVIYLQPEDEVWLEIFFTDQNGLFSDPGWAD 265
Query: 228 STFSGFIIYPD 238
S FSGF++Y D
Sbjct: 266 SLFSGFLLYVD 276
>gi|206597454 C1q and tumor necrosis factor related protein 7
isoform b [Homo sapiens]
Length = 289
Score = 112 bits (279), Expect = 4e-25
Identities = 84/251 (33%), Positives = 112/251 (44%), Gaps = 46/251 (18%)
Query: 29 RMVCDPHG-PRGPGPDGAPASVPPFP----------PGAKGEVGRRGKAGLRGPPGP--- 74
R +C G P PGP GA S P G KGE G +G AGLRG GP
Sbjct: 31 RYICSIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGL 90
Query: 75 ------------PGPRGPPGEPGRPGPPGPPG----------PGPGGVAPAAGYVPRIAF 112
GP GP GE G GP GPPG PG GV V + AF
Sbjct: 91 AGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGVCRCGSIVLKSAF 150
Query: 113 YAGLRR--PHEGYEVLRFDDVVTNVGNAYEAASGKFTCPMPGVYFFAYHVLMRGGDGTSM 170
G+ P E ++ F+ V+ N G Y A+GKF C PG+Y+F+Y + + +
Sbjct: 151 SVGITTSYPEERLPII-FNKVLFNEGEHYNPATGKFICAFPGIYYFSYDITLA---NKHL 206
Query: 171 WADLMKNGQVRASAIAQDADQNYDYASNSVILHLDVGDEVFIKL---DGGKVHGGNTNKY 227
L+ NGQ R + N+D AS S +++L DEV++++ D +
Sbjct: 207 AIGLVHNGQYRIKTFDANTG-NHDVASGSTVIYLQPEDEVWLEIFFTDQNGLFSDPGWAD 265
Query: 228 STFSGFIIYPD 238
S FSGF++Y D
Sbjct: 266 SLFSGFLLYVD 276
>gi|206597452 C1q and tumor necrosis factor related protein 7
isoform a [Homo sapiens]
Length = 296
Score = 112 bits (279), Expect = 4e-25
Identities = 84/251 (33%), Positives = 112/251 (44%), Gaps = 46/251 (18%)
Query: 29 RMVCDPHG-PRGPGPDGAPASVPPFP----------PGAKGEVGRRGKAGLRGPPGP--- 74
R +C G P PGP GA S P G KGE G +G AGLRG GP
Sbjct: 38 RYICSIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGL 97
Query: 75 ------------PGPRGPPGEPGRPGPPGPPG----------PGPGGVAPAAGYVPRIAF 112
GP GP GE G GP GPPG PG GV V + AF
Sbjct: 98 AGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGVCRCGSIVLKSAF 157
Query: 113 YAGLRR--PHEGYEVLRFDDVVTNVGNAYEAASGKFTCPMPGVYFFAYHVLMRGGDGTSM 170
G+ P E ++ F+ V+ N G Y A+GKF C PG+Y+F+Y + + +
Sbjct: 158 SVGITTSYPEERLPII-FNKVLFNEGEHYNPATGKFICAFPGIYYFSYDITLA---NKHL 213
Query: 171 WADLMKNGQVRASAIAQDADQNYDYASNSVILHLDVGDEVFIKL---DGGKVHGGNTNKY 227
L+ NGQ R + N+D AS S +++L DEV++++ D +
Sbjct: 214 AIGLVHNGQYRIKTFDANTG-NHDVASGSTVIYLQPEDEVWLEIFFTDQNGLFSDPGWAD 272
Query: 228 STFSGFIIYPD 238
S FSGF++Y D
Sbjct: 273 SLFSGFLLYVD 283
>gi|122937273 hypothetical protein LOC131149 [Homo sapiens]
Length = 477
Score = 111 bits (277), Expect = 6e-25
Identities = 73/193 (37%), Positives = 105/193 (54%), Gaps = 13/193 (6%)
Query: 54 PGAKGEVGRRGKAGLRGPPGPPGPRGPPGEPGRPGPPGPPG-PGPGGVAPAAG---YVPR 109
PGAKG+ G +G+ G GPPG GP GP G+ G G GP G G G + G VPR
Sbjct: 283 PGAKGDPGIKGEKGELGPPGLLGPTGPKGDIGNKGVRGPTGKKGSRGFKGSKGELARVPR 342
Query: 110 IAFYAGLRRPHEGYEV-LRFDDVVTNVGNAYEAASGKFTCPMPGVYFFAYHVLMRGGDG- 167
AF AGL +P + ++F+ ++ N Y +GKF C +PG Y F+YH+ +RG
Sbjct: 343 SAFSAGLSKPFPPPNIPIKFEKILYNDQGNYSPVTGKFNCSIPGTYVFSYHITVRGRPAR 402
Query: 168 TSMWADLMKNGQVRASAIAQDADQNYDYASNSVILHLDVGDEVFIKL--DGGKVHGGNTN 225
S+ A K + R + Q+ DQ AS VIL L GD+V++++ D V+ +
Sbjct: 403 ISLVAQNKKQFKSRETLYGQEIDQ----ASLLVILKLSAGDQVWLEVSKDWNGVY-VSAE 457
Query: 226 KYSTFSGFIIYPD 238
S F+GF++YP+
Sbjct: 458 DDSIFTGFLLYPE 470
Score = 55.5 bits (132), Expect = 4e-08
Identities = 32/74 (43%), Positives = 37/74 (50%), Gaps = 8/74 (10%)
Query: 40 PGPDGAPASVP-PFPPGAKGEVGRRGKAGLRGPPGPPGPRGPPGEPGRPGPPGPPGP--- 95
PGP G ++ P PPG G G RG G +G G G +G PG PG+PG G PGP
Sbjct: 121 PGPKGEAGNLGIPGPPGVVGPQGPRGYKGEKGLKGERGDQGVPGYPGKPGAQGEPGPKGD 180
Query: 96 ----GPGGVAPAAG 105
G GGV G
Sbjct: 181 KGNIGLGGVKGQKG 194
Score = 40.8 bits (94), Expect = 0.001
Identities = 18/35 (51%), Positives = 21/35 (60%)
Query: 61 GRRGKAGLRGPPGPPGPRGPPGEPGRPGPPGPPGP 95
G++G+ G G PGP G G G PG PG GP GP
Sbjct: 110 GQKGEPGETGQPGPKGEAGNLGIPGPPGVVGPQGP 144
Score = 40.0 bits (92), Expect = 0.002
Identities = 20/41 (48%), Positives = 22/41 (53%)
Query: 54 PGAKGEVGRRGKAGLRGPPGPPGPRGPPGEPGRPGPPGPPG 94
PG KGE G G+ G +G G G GPPG G GP G G
Sbjct: 109 PGQKGEPGETGQPGPKGEAGNLGIPGPPGVVGPQGPRGYKG 149
Score = 39.3 bits (90), Expect = 0.003
Identities = 31/87 (35%), Positives = 33/87 (37%), Gaps = 19/87 (21%)
Query: 31 VCDPHGPRG----------------PGPDGAP-ASVPPFPPGAKGEVGRRGKAGLRGPPG 73
V P GPRG PG G P A P P G KG +G G G +G G
Sbjct: 138 VVGPQGPRGYKGEKGLKGERGDQGVPGYPGKPGAQGEPGPKGDKGNIGLGGVKGQKGSKG 197
Query: 74 PPGPRGPPGEPGRPGPPGPPG--PGPG 98
GE G G G PG GPG
Sbjct: 198 DTCGNCTKGEKGDQGAMGSPGLHGGPG 224
Score = 38.1 bits (87), Expect = 0.007
Identities = 28/78 (35%), Positives = 32/78 (41%), Gaps = 21/78 (26%)
Query: 36 GPRG-------PGPDGAPASVPPFPPGAKGEVGRRG------------KAGLRGPPGPPG 76
GP+G PGP G P P G KGE G +G K G +G PGP G
Sbjct: 122 GPKGEAGNLGIPGPPGVVG--PQGPRGYKGEKGLKGERGDQGVPGYPGKPGAQGEPGPKG 179
Query: 77 PRGPPGEPGRPGPPGPPG 94
+G G G G G G
Sbjct: 180 DKGNIGLGGVKGQKGSKG 197
Score = 37.0 bits (84), Expect = 0.015
Identities = 17/37 (45%), Positives = 19/37 (51%)
Query: 55 GAKGEVGRRGKAGLRGPPGPPGPRGPPGEPGRPGPPG 91
G KG+ G G GL G PG G +G GE G G G
Sbjct: 206 GEKGDQGAMGSPGLHGGPGAKGEKGEMGEKGEMGDKG 242
Score = 33.5 bits (75), Expect = 0.17
Identities = 17/38 (44%), Positives = 19/38 (50%)
Query: 57 KGEVGRRGKAGLRGPPGPPGPRGPPGEPGRPGPPGPPG 94
KGE G +G G G G PG +G GE G G G G
Sbjct: 205 KGEKGDQGAMGSPGLHGGPGAKGEKGEMGEKGEMGDKG 242
>gi|65301115 C1q and tumor necrosis factor related protein 9 [Homo
sapiens]
Length = 333
Score = 110 bits (276), Expect = 8e-25
Identities = 73/220 (33%), Positives = 109/220 (49%), Gaps = 26/220 (11%)
Query: 34 PHGPRGPGPDGAPASVPPFPPGAKGEVGRRGKAGLRGPPGPPGPRGPPGEPGRPGPPGPP 93
P G +G D P P G +G +G G GL GP GP G GP GE G GP G P
Sbjct: 120 PQGQKGNKGDVGPTG----PEGPRGNIGPLGPTGLPGPMGPIGKPGPKGEAGPTGPQGEP 175
Query: 94 G----------PGPGGVAPAAGYVPRIAFYAGL----RRPHEGYEVLRFDDVVTNVGNAY 139
G G G +P+ AF GL + P + +FD ++ N N Y
Sbjct: 176 GVRGIRGWKGDRGEKGKIGETLVLPKSAFTVGLTVLSKFPSSDMPI-KFDKILYNEFNHY 234
Query: 140 EAASGKFTCPMPGVYFFAYHVLMRGGDGTSMWADLMKNGQVRASAIAQDADQNYDYASNS 199
+ A+GKFTC + GVY+F YH+ + ++ L+KNG V+ + D AS
Sbjct: 235 DTAAGKFTCHIAGVYYFTYHITV---FSRNVQVSLVKNG-VKILHTKDAYMSSEDQASGG 290
Query: 200 VILHLDVGDEVFIKLDGGKVHGG---NTNKYSTFSGFIIY 236
++L L +GDEV++++ GG+ G + + +TF+GF+++
Sbjct: 291 IVLQLKLGDEVWLQVTGGERFNGLFADEDDDTTFTGFLLF 330
Score = 44.3 bits (103), Expect = 9e-05
Identities = 25/55 (45%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 54 PGAKGEVGRRGKAGLRGPPGPPGPRGPPGEPGRPGPPGPPG-PGPGGVAPAAGYV 107
PG G G G G G G G +G GEPGRPG PG G G G A G V
Sbjct: 28 PGIPGNPGHNGLPGRDGRDGAKGDKGDAGEPGRPGSPGKDGTSGEKGERGADGKV 82
Score = 41.2 bits (95), Expect = 8e-04
Identities = 23/56 (41%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 51 PFPPGAKGEVGRRGKAGLRGPPGPPGPRGPPGEPGRPGPPGPPGP-GPGGVAPAAG 105
P PG G GR G+ G +G G G G PG PG+ G G G G G A G
Sbjct: 31 PGNPGHNGLPGRDGRDGAKGDKGDAGEPGRPGSPGKDGTSGEKGERGADGKVEAKG 86
Score = 38.1 bits (87), Expect = 0.007
Identities = 19/44 (43%), Positives = 20/44 (45%)
Query: 51 PFPPGAKGEVGRRGKAGLRGPPGPPGPRGPPGEPGRPGPPGPPG 94
P PG G G G+ G G G G G PG PG PG G G
Sbjct: 28 PGIPGNPGHNGLPGRDGRDGAKGDKGDAGEPGRPGSPGKDGTSG 71
Score = 37.4 bits (85), Expect = 0.012
Identities = 18/40 (45%), Positives = 20/40 (50%)
Query: 55 GAKGEVGRRGKAGLRGPPGPPGPRGPPGEPGRPGPPGPPG 94
G G G G GL G G G +G G+ G PG PG PG
Sbjct: 26 GHPGIPGNPGHNGLPGRDGRDGAKGDKGDAGEPGRPGSPG 65
Score = 35.4 bits (80), Expect = 0.044
Identities = 20/50 (40%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Query: 57 KGEVGRRGKAGLRGPPGPPGPRGPPGEPGRPGPPGPPG-PGPGGVAPAAG 105
+G G G G G PG G G G+ G G PG PG PG G + G
Sbjct: 25 QGHPGIPGNPGHNGLPGRDGRDGAKGDKGDAGEPGRPGSPGKDGTSGEKG 74
>gi|56847616 C1q and tumor necrosis factor related protein 9B [Homo
sapiens]
Length = 333
Score = 110 bits (274), Expect = 1e-24
Identities = 73/220 (33%), Positives = 109/220 (49%), Gaps = 26/220 (11%)
Query: 34 PHGPRGPGPDGAPASVPPFPPGAKGEVGRRGKAGLRGPPGPPGPRGPPGEPGRPGPPGPP 93
P G +G D P P G +G +G G GL GP GP G GP GE G GP G P
Sbjct: 120 PQGQKGNKGDVGPTG----PEGPRGNIGPLGPTGLPGPMGPIGKPGPKGEAGPTGPQGEP 175
Query: 94 G----------PGPGGVAPAAGYVPRIAFYAGL----RRPHEGYEVLRFDDVVTNVGNAY 139
G G G +P+ AF GL + P + +FD ++ N N Y
Sbjct: 176 GVRGIRGWKGDRGEKGKIGETLVLPKSAFTVGLTVLSKFPSSDVPI-KFDKILYNEFNHY 234
Query: 140 EAASGKFTCPMPGVYFFAYHVLMRGGDGTSMWADLMKNGQVRASAIAQDADQNYDYASNS 199
+ A GKFTC + GVY+F YH+ + ++ L+KNG V+ + D AS S
Sbjct: 235 DTAVGKFTCHIAGVYYFTYHITV---FSRNVQVSLVKNG-VKILHTRDAYVSSEDQASGS 290
Query: 200 VILHLDVGDEVFIKLDGGKVHGG---NTNKYSTFSGFIIY 236
++L L +GDE+++++ GG+ G + + +TF+GF+++
Sbjct: 291 IVLQLKLGDEMWLQVTGGERFNGLFADEDDDTTFTGFLLF 330
Score = 41.2 bits (95), Expect = 8e-04
Identities = 24/55 (43%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Query: 54 PGAKGEVGRRGKAGLRGPPGPPGPRGPPGEPGRPGPPGPPG-PGPGGVAPAAGYV 107
PG G G G G G G G +G GEPG PG PG G G G A G V
Sbjct: 28 PGIPGNPGHNGLPGRDGRDGAKGDKGDAGEPGCPGSPGKDGTSGEKGERGADGKV 82
Score = 40.8 bits (94), Expect = 0.001
Identities = 23/56 (41%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 51 PFPPGAKGEVGRRGKAGLRGPPGPPGPRGPPGEPGRPGPPGPPGP-GPGGVAPAAG 105
P PG G GR G+ G +G G G G PG PG+ G G G G G A G
Sbjct: 31 PGNPGHNGLPGRDGRDGAKGDKGDAGEPGCPGSPGKDGTSGEKGERGADGKVEAKG 86
Score = 37.0 bits (84), Expect = 0.015
Identities = 18/40 (45%), Positives = 20/40 (50%)
Query: 55 GAKGEVGRRGKAGLRGPPGPPGPRGPPGEPGRPGPPGPPG 94
G G G G GL G G G +G G+ G PG PG PG
Sbjct: 26 GHPGIPGNPGHNGLPGRDGRDGAKGDKGDAGEPGCPGSPG 65
Score = 36.6 bits (83), Expect = 0.020
Identities = 19/44 (43%), Positives = 20/44 (45%)
Query: 51 PFPPGAKGEVGRRGKAGLRGPPGPPGPRGPPGEPGRPGPPGPPG 94
P PG G G G+ G G G G G PG PG PG G G
Sbjct: 28 PGIPGNPGHNGLPGRDGRDGAKGDKGDAGEPGCPGSPGKDGTSG 71
Score = 35.0 bits (79), Expect = 0.057
Identities = 20/50 (40%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Query: 57 KGEVGRRGKAGLRGPPGPPGPRGPPGEPGRPGPPGPPG-PGPGGVAPAAG 105
+G G G G G PG G G G+ G G PG PG PG G + G
Sbjct: 25 QGHPGIPGNPGHNGLPGRDGRDGAKGDKGDAGEPGCPGSPGKDGTSGEKG 74
>gi|13569919 C1q and tumor necrosis factor related protein 3 isoform
a [Homo sapiens]
Length = 246
Score = 107 bits (267), Expect = 9e-24
Identities = 68/201 (33%), Positives = 100/201 (49%), Gaps = 16/201 (7%)
Query: 41 GPDGAPASVPPFPPGAKGEVGRRGKAGLRGPPGPPGPRGPPGEPGRPGPPGPPGP----G 96
GP G PP PPG G G G G G G G +G G+ G G G GP G
Sbjct: 54 GPPG-----PPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEKG 108
Query: 97 PGGVAPAAGYVPRIAFYAGLRRPHEGYEV-LRFDDVVTNVGNAYEAASGKFTCPMPGVYF 155
G+ P +IAF A L + F V TN+GN ++ +G+F P+ GVYF
Sbjct: 109 YPGIPPEL----QIAFMASLATHFSNQNSGIIFSSVETNIGNFFDVMTGRFGAPVSGVYF 164
Query: 156 FAYHVLMRGGDGTSMWADLMKNGQVRASAIAQDADQNYDYASNSVILHLDVGDEVFIKLD 215
F + +M+ D ++ LM NG S + + D +SN +L L GDEV++++
Sbjct: 165 FTFS-MMKHEDVEEVYVYLMHNGNTVFSMYSYEMKGKSDTSSNHAVLKLAKGDEVWLRMG 223
Query: 216 GGKVHGGNTNKYSTFSGFIIY 236
G +HG + ++STF+GF+++
Sbjct: 224 NGALHGDH-QRFSTFAGFLLF 243
>gi|62739183 C1q and tumor necrosis factor related protein 3 isoform
b [Homo sapiens]
Length = 319
Score = 107 bits (267), Expect = 9e-24
Identities = 68/201 (33%), Positives = 100/201 (49%), Gaps = 16/201 (7%)
Query: 41 GPDGAPASVPPFPPGAKGEVGRRGKAGLRGPPGPPGPRGPPGEPGRPGPPGPPGP----G 96
GP G PP PPG G G G G G G G +G G+ G G G GP G
Sbjct: 127 GPPG-----PPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEKG 181
Query: 97 PGGVAPAAGYVPRIAFYAGLRRPHEGYEV-LRFDDVVTNVGNAYEAASGKFTCPMPGVYF 155
G+ P +IAF A L + F V TN+GN ++ +G+F P+ GVYF
Sbjct: 182 YPGIPPEL----QIAFMASLATHFSNQNSGIIFSSVETNIGNFFDVMTGRFGAPVSGVYF 237
Query: 156 FAYHVLMRGGDGTSMWADLMKNGQVRASAIAQDADQNYDYASNSVILHLDVGDEVFIKLD 215
F + +M+ D ++ LM NG S + + D +SN +L L GDEV++++
Sbjct: 238 FTFS-MMKHEDVEEVYVYLMHNGNTVFSMYSYEMKGKSDTSSNHAVLKLAKGDEVWLRMG 296
Query: 216 GGKVHGGNTNKYSTFSGFIIY 236
G +HG + ++STF+GF+++
Sbjct: 297 NGALHGDH-QRFSTFAGFLLF 316
>gi|5901944 elastin microfibril interfacer 1 [Homo sapiens]
Length = 1016
Score = 98.2 bits (243), Expect = 5e-21
Identities = 72/201 (35%), Positives = 100/201 (49%), Gaps = 21/201 (10%)
Query: 55 GAKGEVGRRGKAGLRGPPGPPGPRGPPGEPGRPGPPGPPGP-GPGGV--APAAGYVPRIA 111
G GE G G GL+GPPGP GP G PG+ G+ GP GPPGP G GV APAA VP++A
Sbjct: 814 GPAGEAGPPGPPGLQGPPGPAGPPGSPGKDGQEGPIGPPGPQGEQGVEGAPAAP-VPQVA 872
Query: 112 FYAGLRRPHEGYEVLRFDDVVTNVGNAYEAASGKFTCPMPGVYFFAYHVLMRGGDGTSMW 171
F A L P + FD V+ N G Y+ +G FT P+ G Y + ++ G +
Sbjct: 873 FSAALSLPRSEPGTVPFDRVLLNDGGYYDPETGVFTAPLAGRYLLS--AVLTGHRHEKVE 930
Query: 172 ADLMKNGQ----VRASAIAQDADQNYDYASN----------SVILHLDVGDEVFIKLDGG 217
A L ++ Q V + + +N A + S+IL L GD V + L G
Sbjct: 931 AVLSRSNQGVARVDSGGYEPEGLENKPVAESQPSPGTLGVFSLILPLQAGDTVCVDLVMG 990
Query: 218 KVHGGNTNKYSTFSGFIIYPD 238
++ + + FSG ++Y D
Sbjct: 991 QL-AHSEEPLTIFSGALLYGD 1010
>gi|116686136 C1q and tumor necrosis factor related protein 8 [Homo
sapiens]
Length = 252
Score = 92.4 bits (228), Expect = 3e-19
Identities = 62/190 (32%), Positives = 97/190 (51%), Gaps = 18/190 (9%)
Query: 55 GAKGEVGRRGKAGLRGPPGPPGPRGPPGEPGRPGPPGPPGPGPGGVAPAAGYVPRIAFYA 114
G KGE G RG+AG G GPPG RG G G+ G GPPG AA AF
Sbjct: 70 GEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPG--------AACRRAYAAFSV 121
Query: 115 GLR---RPHEGYEVLRFDDVVTNVGNAYEAASGKFTCPMPGVYFFAYHVLMRGGDGTSMW 171
G R + ++ + FD + N+ A++ A+G+F C +PGVYF + +V + +
Sbjct: 122 GRREGLHSSDHFQAVPFDTELVNLDGAFDLAAGRFLCTVPGVYFLSLNV--HTWNYKETY 179
Query: 172 ADLMKNGQVRASAIAQDADQNYDYASNSVILHLDVGDEVFIKL----DGGKVHGGNTNKY 227
+M N + A AQ ++++ A S++L L GD V++++ ++G + + Y
Sbjct: 180 LHIMLNRRPAAVLYAQPSERSVMQA-QSLMLLLAAGDAVWVRMFQRDRDNAIYGEHGDLY 238
Query: 228 STFSGFIIYP 237
TFSG ++ P
Sbjct: 239 ITFSGHLVKP 248
>gi|89886217 cerebellin 3 precursor [Homo sapiens]
Length = 205
Score = 89.7 bits (221), Expect = 2e-18
Identities = 61/163 (37%), Positives = 83/163 (50%), Gaps = 16/163 (9%)
Query: 83 EPGRPGPPGPPGPGPGGVAPAAGYVPRIAFYAGLRRPHEGYE--------VLRFDDVVTN 134
EPGR GP G G P R+AF A HE + FD V+ N
Sbjct: 50 EPGRAAAGGPGGAALGEAPPG-----RVAFAAVRSHHHEPAGETGNGTSGAIYFDQVLVN 104
Query: 135 VGNAYEAASGKFTCPMPGVYFFAYHVLMRGGDGTSMWADLMKNGQVRASAIAQDADQNYD 194
G ++ ASG F P+ GVY F +HV ++ + ++ LM N SA A D D +
Sbjct: 105 EGGGFDRASGSFVAPVRGVYSFRFHV-VKVYNRQTVQVSLMLNTWPVISAFANDPDVTRE 163
Query: 195 YASNSVILHLDVGDEVFIKLDGGKVHGGNTNKYSTFSGFIIYP 237
A++SV+L LD GD V ++L G + GG KYS+FSGF+I+P
Sbjct: 164 AATSSVLLPLDPGDRVSLRLRRGNLLGG--WKYSSFSGFLIFP 204
>gi|50428933 C1q domain containing 1 isoform 1 [Homo sapiens]
Length = 1127
Score = 87.0 bits (214), Expect = 1e-17
Identities = 42/111 (37%), Positives = 70/111 (63%), Gaps = 2/111 (1%)
Query: 128 FDDVVTNVGNAYEAASGKFTCPMPGVYFFAYHVLMRGGDGTSMWADLMKNGQVRASAIAQ 187
FD ++ N+G ++ G+F CP+ G Y F +H+L + ++ +LMKN +V SA A
Sbjct: 1019 FDLLLNNLGETFDLQLGRFNCPVNGTYVFIFHMLKLAVN-VPLYVNLMKNEEVLVSAYAN 1077
Query: 188 DADQNYDYASNSVILHLDVGDEVFIKLDGGKVHGGNTNKYSTFSGFIIYPD 238
D +++ ASN IL L GD+++++L G ++G + KYSTFSG+++Y D
Sbjct: 1078 DGAPDHETASNHAILQLFQGDQIWLRLHRGAIYGSSW-KYSTFSGYLLYQD 1127
>gi|50428931 C1q domain containing 1 isoform 3 [Homo sapiens]
Length = 793
Score = 87.0 bits (214), Expect = 1e-17
Identities = 42/111 (37%), Positives = 70/111 (63%), Gaps = 2/111 (1%)
Query: 128 FDDVVTNVGNAYEAASGKFTCPMPGVYFFAYHVLMRGGDGTSMWADLMKNGQVRASAIAQ 187
FD ++ N+G ++ G+F CP+ G Y F +H+L + ++ +LMKN +V SA A
Sbjct: 685 FDLLLNNLGETFDLQLGRFNCPVNGTYVFIFHMLKLAVN-VPLYVNLMKNEEVLVSAYAN 743
Query: 188 DADQNYDYASNSVILHLDVGDEVFIKLDGGKVHGGNTNKYSTFSGFIIYPD 238
D +++ ASN IL L GD+++++L G ++G + KYSTFSG+++Y D
Sbjct: 744 DGAPDHETASNHAILQLFQGDQIWLRLHRGAIYGSSW-KYSTFSGYLLYQD 793
>gi|23503235 C1q domain containing 1 isoform 2 [Homo sapiens]
Length = 1077
Score = 87.0 bits (214), Expect = 1e-17
Identities = 42/111 (37%), Positives = 70/111 (63%), Gaps = 2/111 (1%)
Query: 128 FDDVVTNVGNAYEAASGKFTCPMPGVYFFAYHVLMRGGDGTSMWADLMKNGQVRASAIAQ 187
FD ++ N+G ++ G+F CP+ G Y F +H+L + ++ +LMKN +V SA A
Sbjct: 969 FDLLLNNLGETFDLQLGRFNCPVNGTYVFIFHMLKLAVN-VPLYVNLMKNEEVLVSAYAN 1027
Query: 188 DADQNYDYASNSVILHLDVGDEVFIKLDGGKVHGGNTNKYSTFSGFIIYPD 238
D +++ ASN IL L GD+++++L G ++G + KYSTFSG+++Y D
Sbjct: 1028 DGAPDHETASNHAILQLFQGDQIWLRLHRGAIYGSSW-KYSTFSGYLLYQD 1077
>gi|32698861 cerebellin 2 precursor [Homo sapiens]
Length = 224
Score = 86.7 bits (213), Expect = 2e-17
Identities = 51/135 (37%), Positives = 79/135 (58%), Gaps = 9/135 (6%)
Query: 109 RIAFYAGLRRPHEGYEV------LRFDDVVTNVGNAYEAASGKFTCPMPGVYFFAYHVLM 162
++AF A HE E+ + FD V+ N+GN ++ AS F P G+Y F++HV +
Sbjct: 92 KVAFSATRSTNHEPSEMSNRTMTIYFDQVLVNIGNHFDLASSIFVAPRKGIYSFSFHV-V 150
Query: 163 RGGDGTSMWADLMKNGQVRASAIAQDADQNYDYASNSVILHLDVGDEVFIKLDGGKVHGG 222
+ + ++ LM+NG SA A D D + ASN V+L ++ D+V +KL+ G + GG
Sbjct: 151 KVYNRQTIQVSLMQNGYPVISAFAGDQDVTREAASNGVLLLMEREDKVHLKLERGNLMGG 210
Query: 223 NTNKYSTFSGFIIYP 237
KYSTFSGF+++P
Sbjct: 211 --WKYSTFSGFLVFP 223
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.144 0.467
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,388,944
Number of Sequences: 37866
Number of extensions: 1290320
Number of successful extensions: 50133
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 967
Number of HSP's successfully gapped in prelim test: 1146
Number of HSP's that attempted gapping in prelim test: 10113
Number of HSP's gapped (non-prelim): 13505
length of query: 238
length of database: 18,247,518
effective HSP length: 99
effective length of query: 139
effective length of database: 14,498,784
effective search space: 2015330976
effective search space used: 2015330976
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.