BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|56549093 B-cell receptor-associated protein BAP29 isoform a [Homo sapiens] (348 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|56549093 B-cell receptor-associated protein BAP29 isoform a [... 693 0.0 gi|56549091 B-cell receptor-associated protein BAP29 isoform b [... 452 e-127 gi|32171186 B-cell receptor-associated protein 31 isoform b [Hom... 224 7e-59 gi|213511508 B-cell receptor-associated protein 31 isoform a [Ho... 224 7e-59 gi|213511012 B-cell receptor-associated protein 31 isoform b [Ho... 224 7e-59 gi|116256481 TNFAIP3 interacting protein 1 [Homo sapiens] 44 3e-04 gi|51317384 GLE1 RNA export mediator homolog isoform 1 [Homo sap... 43 4e-04 gi|75750474 spectrin domain with coiled-coils 1 NSP5a3b [Homo sa... 43 4e-04 gi|75750468 spectrin domain with coiled-coils 1 NSP5a3a [Homo sa... 43 4e-04 gi|75750472 spectrin domain with coiled-coils 1 NSP5b3b [Homo sa... 43 4e-04 gi|75750466 spectrin domain with coiled-coils 1 NSP5b3a [Homo sa... 43 4e-04 gi|4557627 GLE1 RNA export mediator homolog isoform 2 [Homo sapi... 43 4e-04 gi|134152708 arginine and glutamate rich 1 [Homo sapiens] 43 4e-04 gi|50897852 coiled-coil domain containing 88A isoform 2 [Homo sa... 43 5e-04 gi|208022632 coiled-coil domain containing 88A isoform 1 [Homo s... 43 5e-04 gi|34878904 synaptonemal complex protein 1 [Homo sapiens] 43 5e-04 gi|148746195 trichohyalin [Homo sapiens] 42 6e-04 gi|56961680 coiled-coil domain containing 147 [Homo sapiens] 42 6e-04 gi|115511012 coiled-coil domain containing 136 [Homo sapiens] 40 0.002 gi|223634475 golgi autoantigen, golgin subfamily a, 6D [Homo sap... 40 0.003 gi|51472437 PREDICTED: golgi autoantigen, golgin subfamily a, 6C... 40 0.003 gi|41322923 plectin 1 isoform 11 [Homo sapiens] 40 0.003 gi|41322914 plectin 1 isoform 10 [Homo sapiens] 40 0.003 gi|41322919 plectin 1 isoform 8 [Homo sapiens] 40 0.003 gi|41322910 plectin 1 isoform 7 [Homo sapiens] 40 0.003 gi|41322916 plectin 1 isoform 6 [Homo sapiens] 40 0.003 gi|41322908 plectin 1 isoform 3 [Homo sapiens] 40 0.003 gi|41322912 plectin 1 isoform 2 [Homo sapiens] 40 0.003 gi|47607492 plectin 1 isoform 1 [Homo sapiens] 40 0.003 gi|187761324 shootin1 isoform a [Homo sapiens] 40 0.003 >gi|56549093 B-cell receptor-associated protein BAP29 isoform a [Homo sapiens] Length = 348 Score = 693 bits (1789), Expect = 0.0 Identities = 348/348 (100%), Positives = 348/348 (100%) Query: 1 MTLQWAAVATFLYAEIGLILIFCLPFIPPQRWQKIFSFNVWGKIATFWNKAFLTIIILLI 60 MTLQWAAVATFLYAEIGLILIFCLPFIPPQRWQKIFSFNVWGKIATFWNKAFLTIIILLI Sbjct: 1 MTLQWAAVATFLYAEIGLILIFCLPFIPPQRWQKIFSFNVWGKIATFWNKAFLTIIILLI 60 Query: 61 VLFLDAVREVRKYSSVHTIEKSSTSRPDAYEHTQMKLFRSQRNLYISGFSLFFWLVLRRL 120 VLFLDAVREVRKYSSVHTIEKSSTSRPDAYEHTQMKLFRSQRNLYISGFSLFFWLVLRRL Sbjct: 61 VLFLDAVREVRKYSSVHTIEKSSTSRPDAYEHTQMKLFRSQRNLYISGFSLFFWLVLRRL 120 Query: 121 VTLITQLAKELSNKGVLKTQAENTNKAAKKFMEENEKLKRILKSHGKDEECVLEAENKKL 180 VTLITQLAKELSNKGVLKTQAENTNKAAKKFMEENEKLKRILKSHGKDEECVLEAENKKL Sbjct: 121 VTLITQLAKELSNKGVLKTQAENTNKAAKKFMEENEKLKRILKSHGKDEECVLEAENKKL 180 Query: 181 VEDQEKLKTELRKTSDALSKAQNDVMEMKMQSERLSKEYDQLLKEHSELQHSSFGEFLSK 240 VEDQEKLKTELRKTSDALSKAQNDVMEMKMQSERLSKEYDQLLKEHSELQHSSFGEFLSK Sbjct: 181 VEDQEKLKTELRKTSDALSKAQNDVMEMKMQSERLSKEYDQLLKEHSELQHSSFGEFLSK 240 Query: 241 RSHKNGSIGKQTGSRKGSFRKRQQEKTVNFIKDTCNILCQNDNFVMLASRKFKFRKMHYD 300 RSHKNGSIGKQTGSRKGSFRKRQQEKTVNFIKDTCNILCQNDNFVMLASRKFKFRKMHYD Sbjct: 241 RSHKNGSIGKQTGSRKGSFRKRQQEKTVNFIKDTCNILCQNDNFVMLASRKFKFRKMHYD 300 Query: 301 RFVIFLMPHIGCIVMALSKYLMMFQIYCKVCIPALKKNISMLNTIFTY 348 RFVIFLMPHIGCIVMALSKYLMMFQIYCKVCIPALKKNISMLNTIFTY Sbjct: 301 RFVIFLMPHIGCIVMALSKYLMMFQIYCKVCIPALKKNISMLNTIFTY 348 >gi|56549091 B-cell receptor-associated protein BAP29 isoform b [Homo sapiens] Length = 241 Score = 452 bits (1164), Expect = e-127 Identities = 230/230 (100%), Positives = 230/230 (100%) Query: 1 MTLQWAAVATFLYAEIGLILIFCLPFIPPQRWQKIFSFNVWGKIATFWNKAFLTIIILLI 60 MTLQWAAVATFLYAEIGLILIFCLPFIPPQRWQKIFSFNVWGKIATFWNKAFLTIIILLI Sbjct: 1 MTLQWAAVATFLYAEIGLILIFCLPFIPPQRWQKIFSFNVWGKIATFWNKAFLTIIILLI 60 Query: 61 VLFLDAVREVRKYSSVHTIEKSSTSRPDAYEHTQMKLFRSQRNLYISGFSLFFWLVLRRL 120 VLFLDAVREVRKYSSVHTIEKSSTSRPDAYEHTQMKLFRSQRNLYISGFSLFFWLVLRRL Sbjct: 61 VLFLDAVREVRKYSSVHTIEKSSTSRPDAYEHTQMKLFRSQRNLYISGFSLFFWLVLRRL 120 Query: 121 VTLITQLAKELSNKGVLKTQAENTNKAAKKFMEENEKLKRILKSHGKDEECVLEAENKKL 180 VTLITQLAKELSNKGVLKTQAENTNKAAKKFMEENEKLKRILKSHGKDEECVLEAENKKL Sbjct: 121 VTLITQLAKELSNKGVLKTQAENTNKAAKKFMEENEKLKRILKSHGKDEECVLEAENKKL 180 Query: 181 VEDQEKLKTELRKTSDALSKAQNDVMEMKMQSERLSKEYDQLLKEHSELQ 230 VEDQEKLKTELRKTSDALSKAQNDVMEMKMQSERLSKEYDQLLKEHSELQ Sbjct: 181 VEDQEKLKTELRKTSDALSKAQNDVMEMKMQSERLSKEYDQLLKEHSELQ 230 >gi|32171186 B-cell receptor-associated protein 31 isoform b [Homo sapiens] Length = 246 Score = 224 bits (572), Expect = 7e-59 Identities = 118/235 (50%), Positives = 164/235 (69%), Gaps = 6/235 (2%) Query: 1 MTLQWAAVATFLYAEIGLILIFCLPFIPPQRWQKIFSFNVWGKIATFWNKAFLTIIILLI 60 M+LQW AVATFLYAE+ ++L+ C+PFI P+RWQKIF + + ++ N F+ +I++L+ Sbjct: 1 MSLQWTAVATFLYAEVFVVLLLCIPFISPKRWQKIFKSRLVELLVSYGNTFFVVLIVILV 60 Query: 61 VLFLDAVREVRKYSSVHTIEKSSTSRPDAYEHTQMKLFRSQRNLYISGFSLFFWLVLRRL 120 +L +DAVRE+RKY V T + + + P A EH MKLFR+QRNLYI+GFSL +LRRL Sbjct: 61 LLVIDAVREIRKYDDV-TEKVNLQNNPGAMEHFHMKLFRAQRNLYIAGFSLLLSFLLRRL 119 Query: 121 VTLITQLAKELSNKGVLKTQAENTNKAAKKFMEENEKLKRILKSHG-----KDEECVLEA 175 VTLI+Q A L++ K QAE+ ++AAKK+MEEN++LK+ G + E LE Sbjct: 120 VTLISQQATLLASNEAFKKQAESASEAAKKYMEENDQLKKGAAVDGGKLDVGNAEVKLEE 179 Query: 176 ENKKLVEDQEKLKTELRKTSDALSKAQNDVMEMKMQSERLSKEYDQLLKEHSELQ 230 EN+ L D +KLK EL T L KA+N V+ M+ QSE L+KEYD+LL+EH++LQ Sbjct: 180 ENRSLKADLQKLKDELASTKQKLEKAENQVLAMRKQSEGLTKEYDRLLEEHAKLQ 234 >gi|213511508 B-cell receptor-associated protein 31 isoform a [Homo sapiens] Length = 313 Score = 224 bits (572), Expect = 7e-59 Identities = 118/235 (50%), Positives = 164/235 (69%), Gaps = 6/235 (2%) Query: 1 MTLQWAAVATFLYAEIGLILIFCLPFIPPQRWQKIFSFNVWGKIATFWNKAFLTIIILLI 60 M+LQW AVATFLYAE+ ++L+ C+PFI P+RWQKIF + + ++ N F+ +I++L+ Sbjct: 68 MSLQWTAVATFLYAEVFVVLLLCIPFISPKRWQKIFKSRLVELLVSYGNTFFVVLIVILV 127 Query: 61 VLFLDAVREVRKYSSVHTIEKSSTSRPDAYEHTQMKLFRSQRNLYISGFSLFFWLVLRRL 120 +L +DAVRE+RKY V T + + + P A EH MKLFR+QRNLYI+GFSL +LRRL Sbjct: 128 LLVIDAVREIRKYDDV-TEKVNLQNNPGAMEHFHMKLFRAQRNLYIAGFSLLLSFLLRRL 186 Query: 121 VTLITQLAKELSNKGVLKTQAENTNKAAKKFMEENEKLKRILKSHG-----KDEECVLEA 175 VTLI+Q A L++ K QAE+ ++AAKK+MEEN++LK+ G + E LE Sbjct: 187 VTLISQQATLLASNEAFKKQAESASEAAKKYMEENDQLKKGAAVDGGKLDVGNAEVKLEE 246 Query: 176 ENKKLVEDQEKLKTELRKTSDALSKAQNDVMEMKMQSERLSKEYDQLLKEHSELQ 230 EN+ L D +KLK EL T L KA+N V+ M+ QSE L+KEYD+LL+EH++LQ Sbjct: 247 ENRSLKADLQKLKDELASTKQKLEKAENQVLAMRKQSEGLTKEYDRLLEEHAKLQ 301 >gi|213511012 B-cell receptor-associated protein 31 isoform b [Homo sapiens] Length = 246 Score = 224 bits (572), Expect = 7e-59 Identities = 118/235 (50%), Positives = 164/235 (69%), Gaps = 6/235 (2%) Query: 1 MTLQWAAVATFLYAEIGLILIFCLPFIPPQRWQKIFSFNVWGKIATFWNKAFLTIIILLI 60 M+LQW AVATFLYAE+ ++L+ C+PFI P+RWQKIF + + ++ N F+ +I++L+ Sbjct: 1 MSLQWTAVATFLYAEVFVVLLLCIPFISPKRWQKIFKSRLVELLVSYGNTFFVVLIVILV 60 Query: 61 VLFLDAVREVRKYSSVHTIEKSSTSRPDAYEHTQMKLFRSQRNLYISGFSLFFWLVLRRL 120 +L +DAVRE+RKY V T + + + P A EH MKLFR+QRNLYI+GFSL +LRRL Sbjct: 61 LLVIDAVREIRKYDDV-TEKVNLQNNPGAMEHFHMKLFRAQRNLYIAGFSLLLSFLLRRL 119 Query: 121 VTLITQLAKELSNKGVLKTQAENTNKAAKKFMEENEKLKRILKSHG-----KDEECVLEA 175 VTLI+Q A L++ K QAE+ ++AAKK+MEEN++LK+ G + E LE Sbjct: 120 VTLISQQATLLASNEAFKKQAESASEAAKKYMEENDQLKKGAAVDGGKLDVGNAEVKLEE 179 Query: 176 ENKKLVEDQEKLKTELRKTSDALSKAQNDVMEMKMQSERLSKEYDQLLKEHSELQ 230 EN+ L D +KLK EL T L KA+N V+ M+ QSE L+KEYD+LL+EH++LQ Sbjct: 180 ENRSLKADLQKLKDELASTKQKLEKAENQVLAMRKQSEGLTKEYDRLLEEHAKLQ 234 >gi|116256481 TNFAIP3 interacting protein 1 [Homo sapiens] Length = 636 Score = 43.5 bits (101), Expect = 3e-04 Identities = 41/159 (25%), Positives = 70/159 (44%), Gaps = 17/159 (10%) Query: 120 LVTLITQLAKELSN-KGVLKTQAENTNKAAKKFMEENEKLKRILKSHGKDEEC------- 171 L TL QL KE K L E ++AA++ EEN +LK++L S+G E Sbjct: 208 LQTLCEQLRKENEALKAKLDKGLEQRDQAAERLREENLELKKLLMSNGNKEGASGRPGSP 267 Query: 172 VLEAENKKLVEDQEKLKTELRKTSD--ALSKAQNDVMEMKMQSERL---SKEYDQLLKEH 226 +E KK V Q++ K + AL A+ V ++ Q L +K++DQ H Sbjct: 268 KMEGTGKKAVAGQQQASVTAGKVPEVVALGAAEKKVKMLEQQRSELLEVNKQWDQ----H 323 Query: 227 SELQHSSFGEFLSKRSHKNGSIGKQTGSRKGSFRKRQQE 265 + + +++ K + KQ + ++Q++ Sbjct: 324 FRSMKQQYEQKITELRQKLADLQKQVTDLEAEREQKQRD 362 >gi|51317384 GLE1 RNA export mediator homolog isoform 1 [Homo sapiens] Length = 698 Score = 43.1 bits (100), Expect = 4e-04 Identities = 39/155 (25%), Positives = 72/155 (46%), Gaps = 11/155 (7%) Query: 73 YSSVHTIEKSSTSRPDAYEHTQMKLFRSQRNLYISGFSLFFWLVLRRLVTLITQLAKELS 132 +S + T D +HT+ + +S R + + G + LV R T +L +E Sbjct: 95 FSPASPATPNGTKGKDESQHTESMVLQSSRGIKVEGCVRMYELVHRMKGTEGLRLWQEEQ 154 Query: 133 NKGVLKTQAENTNKAAKKFMEENEKLKRILKSHGKDEEC--VLEAENKKLVEDQEKLKTE 190 + V + +E ++ K+F E E LK H + ++ V+E +++ + QEKLK E Sbjct: 155 ERKV-QALSEMASEQLKRFDEWKE-----LKQHKEFQDLREVMEKSSREALGHQEKLKAE 208 Query: 191 LRKTSDALSKAQNDVMEMKM---QSERLSKEYDQL 222 R + L+ + + ++ + ERL KE Q+ Sbjct: 209 HRHRAKILNLKLREAEQQRVKQAEQERLRKEEGQI 243 >gi|75750474 spectrin domain with coiled-coils 1 NSP5a3b [Homo sapiens] Length = 987 Score = 43.1 bits (100), Expect = 4e-04 Identities = 40/177 (22%), Positives = 78/177 (44%), Gaps = 26/177 (14%) Query: 123 LITQLAKELSNKGVLKTQAENTNKAAKKFMEENEKLKRILKSHGKDEE------CVLEAE 176 L + K + K +L+T + A++ +ENEKL +L+ K+EE ++E E Sbjct: 327 LTAENEKLVDEKTILETSFHQHRERAEQLSQENEKLMNLLQERVKNEEPTTQEGKIIELE 386 Query: 177 NK-------------KLVEDQEKLKTELRKTSDALSKAQNDVMEMKMQSERLSKEYDQLL 223 K KL+ Q++L LRK + A + +K ++E+L+ E+ +L Sbjct: 387 QKCTGILEQGRFEREKLLNIQQQLTCSLRKVEEENQGALEMIKRLKEENEKLN-EFLELE 445 Query: 224 KEHSELQHSSFGE---FLSKRSHKNGSIGKQTGSRKGSFRKRQQEKTVNFIKDTCNI 277 + ++ + + E L +NGS+ +G +K + V ++C + Sbjct: 446 RHNNNMMAKTLEECRVTLEGLKMENGSLKSHL---QGEKQKATEASAVEQTAESCEV 499 >gi|75750468 spectrin domain with coiled-coils 1 NSP5a3a [Homo sapiens] Length = 709 Score = 43.1 bits (100), Expect = 4e-04 Identities = 40/177 (22%), Positives = 78/177 (44%), Gaps = 26/177 (14%) Query: 123 LITQLAKELSNKGVLKTQAENTNKAAKKFMEENEKLKRILKSHGKDEE------CVLEAE 176 L + K + K +L+T + A++ +ENEKL +L+ K+EE ++E E Sbjct: 327 LTAENEKLVDEKTILETSFHQHRERAEQLSQENEKLMNLLQERVKNEEPTTQEGKIIELE 386 Query: 177 NK-------------KLVEDQEKLKTELRKTSDALSKAQNDVMEMKMQSERLSKEYDQLL 223 K KL+ Q++L LRK + A + +K ++E+L+ E+ +L Sbjct: 387 QKCTGILEQGRFEREKLLNIQQQLTCSLRKVEEENQGALEMIKRLKEENEKLN-EFLELE 445 Query: 224 KEHSELQHSSFGE---FLSKRSHKNGSIGKQTGSRKGSFRKRQQEKTVNFIKDTCNI 277 + ++ + + E L +NGS+ +G +K + V ++C + Sbjct: 446 RHNNNMMAKTLEECRVTLEGLKMENGSLKSHL---QGEKQKATEASAVEQTAESCEV 499 >gi|75750472 spectrin domain with coiled-coils 1 NSP5b3b [Homo sapiens] Length = 1068 Score = 43.1 bits (100), Expect = 4e-04 Identities = 40/177 (22%), Positives = 78/177 (44%), Gaps = 26/177 (14%) Query: 123 LITQLAKELSNKGVLKTQAENTNKAAKKFMEENEKLKRILKSHGKDEE------CVLEAE 176 L + K + K +L+T + A++ +ENEKL +L+ K+EE ++E E Sbjct: 408 LTAENEKLVDEKTILETSFHQHRERAEQLSQENEKLMNLLQERVKNEEPTTQEGKIIELE 467 Query: 177 NK-------------KLVEDQEKLKTELRKTSDALSKAQNDVMEMKMQSERLSKEYDQLL 223 K KL+ Q++L LRK + A + +K ++E+L+ E+ +L Sbjct: 468 QKCTGILEQGRFEREKLLNIQQQLTCSLRKVEEENQGALEMIKRLKEENEKLN-EFLELE 526 Query: 224 KEHSELQHSSFGE---FLSKRSHKNGSIGKQTGSRKGSFRKRQQEKTVNFIKDTCNI 277 + ++ + + E L +NGS+ +G +K + V ++C + Sbjct: 527 RHNNNMMAKTLEECRVTLEGLKMENGSLKSHL---QGEKQKATEASAVEQTAESCEV 580 >gi|75750466 spectrin domain with coiled-coils 1 NSP5b3a [Homo sapiens] Length = 790 Score = 43.1 bits (100), Expect = 4e-04 Identities = 40/177 (22%), Positives = 78/177 (44%), Gaps = 26/177 (14%) Query: 123 LITQLAKELSNKGVLKTQAENTNKAAKKFMEENEKLKRILKSHGKDEE------CVLEAE 176 L + K + K +L+T + A++ +ENEKL +L+ K+EE ++E E Sbjct: 408 LTAENEKLVDEKTILETSFHQHRERAEQLSQENEKLMNLLQERVKNEEPTTQEGKIIELE 467 Query: 177 NK-------------KLVEDQEKLKTELRKTSDALSKAQNDVMEMKMQSERLSKEYDQLL 223 K KL+ Q++L LRK + A + +K ++E+L+ E+ +L Sbjct: 468 QKCTGILEQGRFEREKLLNIQQQLTCSLRKVEEENQGALEMIKRLKEENEKLN-EFLELE 526 Query: 224 KEHSELQHSSFGE---FLSKRSHKNGSIGKQTGSRKGSFRKRQQEKTVNFIKDTCNI 277 + ++ + + E L +NGS+ +G +K + V ++C + Sbjct: 527 RHNNNMMAKTLEECRVTLEGLKMENGSLKSHL---QGEKQKATEASAVEQTAESCEV 580 >gi|4557627 GLE1 RNA export mediator homolog isoform 2 [Homo sapiens] Length = 659 Score = 43.1 bits (100), Expect = 4e-04 Identities = 39/155 (25%), Positives = 72/155 (46%), Gaps = 11/155 (7%) Query: 73 YSSVHTIEKSSTSRPDAYEHTQMKLFRSQRNLYISGFSLFFWLVLRRLVTLITQLAKELS 132 +S + T D +HT+ + +S R + + G + LV R T +L +E Sbjct: 95 FSPASPATPNGTKGKDESQHTESMVLQSSRGIKVEGCVRMYELVHRMKGTEGLRLWQEEQ 154 Query: 133 NKGVLKTQAENTNKAAKKFMEENEKLKRILKSHGKDEEC--VLEAENKKLVEDQEKLKTE 190 + V + +E ++ K+F E E LK H + ++ V+E +++ + QEKLK E Sbjct: 155 ERKV-QALSEMASEQLKRFDEWKE-----LKQHKEFQDLREVMEKSSREALGHQEKLKAE 208 Query: 191 LRKTSDALSKAQNDVMEMKM---QSERLSKEYDQL 222 R + L+ + + ++ + ERL KE Q+ Sbjct: 209 HRHRAKILNLKLREAEQQRVKQAEQERLRKEEGQI 243 >gi|134152708 arginine and glutamate rich 1 [Homo sapiens] Length = 273 Score = 43.1 bits (100), Expect = 4e-04 Identities = 32/108 (29%), Positives = 55/108 (50%), Gaps = 9/108 (8%) Query: 116 VLRRLVTLITQLAKELSNKGVLKTQAENTNKAAKKFMEENEKLKRILKSHGKDEECVLEA 175 VLRR+ + K+L + + QAE AA+K EE E+ KR ++ E +LE Sbjct: 157 VLRRVEEAKRIMEKQLLEELERQRQAE---LAAQKAREEEERAKR------EELERILEE 207 Query: 176 ENKKLVEDQEKLKTELRKTSDALSKAQNDVMEMKMQSERLSKEYDQLL 223 N+K+ E Q KL E + + K + M+++ + +R KE +++ Sbjct: 208 NNRKIAEAQAKLAEEQLRIVEEQRKIHEERMKLEQERQRQQKEEQKII 255 >gi|50897852 coiled-coil domain containing 88A isoform 2 [Homo sapiens] Length = 1843 Score = 42.7 bits (99), Expect = 5e-04 Identities = 31/127 (24%), Positives = 62/127 (48%), Gaps = 2/127 (1%) Query: 117 LRRLVTLITQLAKELSN-KGVLKTQAENTNKAAKKFMEENEKLKRILKSHGKDEECVLEA 175 L+ L L KE + + ++T EN+ + K +ENE L + + S + + EA Sbjct: 521 LQNCQNLSKDLMKEKAQLEKTIETLRENSERQIKILEQENEHLNQTVSSLRQRSQISAEA 580 Query: 176 ENKKLVEDQEKLKTELRKTSDALSKAQNDVMEMKMQSERLSKEYDQLLKEHSELQH-SSF 234 K + ++ + L +++TS LSK + + ++K + E ++ ++ + +EL H Sbjct: 581 RVKDIEKENKILHESIKETSSKLSKIEFEKRQIKKELEHYKEKGERAEELENELHHLEKE 640 Query: 235 GEFLSKR 241 E L K+ Sbjct: 641 NELLQKK 647 Score = 38.5 bits (88), Expect = 0.009 Identities = 33/110 (30%), Positives = 58/110 (52%), Gaps = 7/110 (6%) Query: 127 LAKELSNKGVLKTQAENTNKAAKKFMEENEKLKRILKSHGKDEECV--LEAENKKLVEDQ 184 L K+++N + + E + + EN KLK+ L S + LE EN +L D+ Sbjct: 644 LQKKITNLKITCEKIEALEQENSELERENRKLKKTLDSFKNLTFQLESLEKENSQL--DE 701 Query: 185 EKLKTELRKTSDALSKAQNDVMEMKMQSERLSKEYDQLLKEHSELQHSSF 234 E L ELR+ ++L A + +++++++ L E +Q LK+ EL +SF Sbjct: 702 ENL--ELRRNVESLKCASMKMAQLQLENKELESEKEQ-LKKGLELLKASF 748 Score = 35.0 bits (79), Expect = 0.100 Identities = 36/160 (22%), Positives = 74/160 (46%), Gaps = 26/160 (16%) Query: 129 KELSNKGV--LKTQAENTNKAAKKFME---ENEKLKRILKSHGKDEECV------LEAEN 177 KE KG+ LK + T + + EN++L++ L++ K + + LE EN Sbjct: 734 KEQLKKGLELLKASFKKTERLEVSYQGLDIENQRLQKTLENSNKKIQQLESELQDLEMEN 793 Query: 178 KKLVEDQEKLKTELRKTSDALSKAQNDVMEMKMQSERLSKEYDQLLKEHSELQHSS--FG 235 + L ++ E+LK +S L + + + ++ ++ +L K+ QL KE+ L+ + Sbjct: 794 QTLQKNLEELKI----SSKRLEQLEKENKSLEQETSQLEKDKKQLEKENKRLRQQAEIKD 849 Query: 236 EFLSKRSHKNGSIGKQTGSRKGSFRKRQQEKTVNFIKDTC 275 L + + K G++ K+ + K + K++C Sbjct: 850 TTLEENNVKIGNLEKE---------NKTLSKEIGIYKESC 880 Score = 33.5 bits (75), Expect = 0.29 Identities = 40/177 (22%), Positives = 76/177 (42%), Gaps = 19/177 (10%) Query: 130 ELSNKGVLKTQAENTNKAAKKFMEENEKLKRILKSHGKDEECVL--EAENKKLVEDQEKL 187 EL++ +LK + EN + + E+L+ + S + +L E EN++L + E L Sbjct: 456 ELTSSRLLKLEMEN-----QSLTKTVEELRTTVDSVEGNASKILKMEKENQRLSKKVEIL 510 Query: 188 KTELRKTSDALSKAQN---DVMEMKMQSERLSKEYDQLLKEHSELQHSSFGEFLSKRSHK 244 + E+ + +L QN D+M+ K Q E+ + L+E+SE Q + + H Sbjct: 511 ENEIVQEKQSLQNCQNLSKDLMKEKAQLEKTI----ETLRENSERQIKILEQ---ENEHL 563 Query: 245 NGSIG--KQTGSRKGSFRKRQQEKTVNFIKDTCNILCQNDNFVMLASRKFKFRKMHY 299 N ++ +Q R + EK + ++ + + R+ K HY Sbjct: 564 NQTVSSLRQRSQISAEARVKDIEKENKILHESIKETSSKLSKIEFEKRQIKKELEHY 620 Score = 33.1 bits (74), Expect = 0.38 Identities = 46/190 (24%), Positives = 77/190 (40%), Gaps = 35/190 (18%) Query: 123 LITQLAKELSNKGVLKTQAENTNKAAKKFMEENEKLK-----------RILKSHG--KDE 169 LI Q + E N+ V+K + E+ ++++EKL+ ++ HG K Sbjct: 1129 LIQQSSLENENESVIK-EREDLKSLYDSLIKDHEKLELLHERQASEYESLISKHGTLKSA 1187 Query: 170 ECVLEAENKKL-------------VEDQEK-LKTELRKTSDALSKAQNDVMEMKM---QS 212 LE E++ L +ED EK LK E K + E K ++ Sbjct: 1188 HKNLEVEHRDLEDRYNQLLKQKGQLEDLEKMLKVEQEKMLLENKNHETVAAEYKKLCGEN 1247 Query: 213 ERLSKEYDQLLKEHSELQ--HSSFGEFLSKRSHKNGSIGKQTGSRKGSFRKRQQEKTVNF 270 +RL+ Y QLLKE LQ H + L+ + + + K + +Q + T Sbjct: 1248 DRLNHTYSQLLKETEVLQTDHKNLKSLLNNSKLEQTRLEAEFSKLKEQY--QQLDITSTK 1305 Query: 271 IKDTCNILCQ 280 + + C +L Q Sbjct: 1306 LNNQCELLSQ 1315 Score = 32.3 bits (72), Expect = 0.65 Identities = 45/183 (24%), Positives = 76/183 (41%), Gaps = 40/183 (21%) Query: 126 QLAKELSNKGVLKTQAENTNKAAKKFMEENEKLKRILKSH--GKDEECVLEAENKKLVED 183 +L K L + L Q E+ K + EEN +L+R ++S + L+ ENK+L + Sbjct: 674 KLKKTLDSFKNLTFQLESLEKENSQLDEENLELRRNVESLKCASMKMAQLQLENKELESE 733 Query: 184 QEKLK-------TELRKT-----------------SDALSKAQNDVMEMKMQSERLSKEY 219 +E+LK +KT L + + +++ + + L E Sbjct: 734 KEQLKKGLELLKASFKKTERLEVSYQGLDIENQRLQKTLENSNKKIQQLESELQDLEMEN 793 Query: 220 DQLLKEHSELQHSSFGEFLSKRSHKNGSIGKQTGS--------RKGSFRKRQQEKTVNFI 271 L K EL+ SS + L + +N S+ ++T K + R RQQ + I Sbjct: 794 QTLQKNLEELKISS--KRLEQLEKENKSLEQETSQLEKDKKQLEKENKRLRQQAE----I 847 Query: 272 KDT 274 KDT Sbjct: 848 KDT 850 Score = 32.3 bits (72), Expect = 0.65 Identities = 19/78 (24%), Positives = 40/78 (51%), Gaps = 2/78 (2%) Query: 153 EENEKLKRILKSHGKDEECVLEAENKKLVEDQEKLKTELRKTSDALSKAQNDVMEMKMQS 212 E E + +LK KD +E N L +++ LKT+L++ + Q ++ ++ Q+ Sbjct: 1033 ESQETTRELLKV--KDRLIEVERNNATLQAEKQALKTQLKQLETQNNNLQAQILALQRQT 1090 Query: 213 ERLSKEYDQLLKEHSELQ 230 L ++ L ++++LQ Sbjct: 1091 VSLQEQNTTLQTQNAKLQ 1108 Score = 32.0 bits (71), Expect = 0.84 Identities = 34/145 (23%), Positives = 61/145 (42%), Gaps = 19/145 (13%) Query: 119 RLVTLITQLAKELSNKGVLKTQAENTNKAAKKFMEENEKLKRILKSHGKDEECVLEAENK 178 RL+ + A + K LKTQ + + L+R S +++ L+ +N Sbjct: 1047 RLIEVERNNATLQAEKQALKTQLKQLETQNNNLQAQILALQRQTVSL-QEQNTTLQTQNA 1105 Query: 179 KLVEDQEKLKTE----LRKTSDAL---SKAQNDVMEMKMQSERLSKEYDQLLKEHSEL-- 229 KL + L ++ + + + L S +N+ + + E L YD L+K+H +L Sbjct: 1106 KLQVENSTLNSQSTSLMNQNAQLLIQQSSLENENESVIKEREDLKSLYDSLIKDHEKLEL 1165 Query: 230 ----QHSSFGEFLSKR-----SHKN 245 Q S + +SK +HKN Sbjct: 1166 LHERQASEYESLISKHGTLKSAHKN 1190 >gi|208022632 coiled-coil domain containing 88A isoform 1 [Homo sapiens] Length = 1870 Score = 42.7 bits (99), Expect = 5e-04 Identities = 31/127 (24%), Positives = 62/127 (48%), Gaps = 2/127 (1%) Query: 117 LRRLVTLITQLAKELSN-KGVLKTQAENTNKAAKKFMEENEKLKRILKSHGKDEECVLEA 175 L+ L L KE + + ++T EN+ + K +ENE L + + S + + EA Sbjct: 521 LQNCQNLSKDLMKEKAQLEKTIETLRENSERQIKILEQENEHLNQTVSSLRQRSQISAEA 580 Query: 176 ENKKLVEDQEKLKTELRKTSDALSKAQNDVMEMKMQSERLSKEYDQLLKEHSELQH-SSF 234 K + ++ + L +++TS LSK + + ++K + E ++ ++ + +EL H Sbjct: 581 RVKDIEKENKILHESIKETSSKLSKIEFEKRQIKKELEHYKEKGERAEELENELHHLEKE 640 Query: 235 GEFLSKR 241 E L K+ Sbjct: 641 NELLQKK 647 Score = 38.5 bits (88), Expect = 0.009 Identities = 33/110 (30%), Positives = 58/110 (52%), Gaps = 7/110 (6%) Query: 127 LAKELSNKGVLKTQAENTNKAAKKFMEENEKLKRILKSHGKDEECV--LEAENKKLVEDQ 184 L K+++N + + E + + EN KLK+ L S + LE EN +L D+ Sbjct: 644 LQKKITNLKITCEKIEALEQENSELERENRKLKKTLDSFKNLTFQLESLEKENSQL--DE 701 Query: 185 EKLKTELRKTSDALSKAQNDVMEMKMQSERLSKEYDQLLKEHSELQHSSF 234 E L ELR+ ++L A + +++++++ L E +Q LK+ EL +SF Sbjct: 702 ENL--ELRRNVESLKCASMKMAQLQLENKELESEKEQ-LKKGLELLKASF 748 Score = 35.0 bits (79), Expect = 0.100 Identities = 36/160 (22%), Positives = 74/160 (46%), Gaps = 26/160 (16%) Query: 129 KELSNKGV--LKTQAENTNKAAKKFME---ENEKLKRILKSHGKDEECV------LEAEN 177 KE KG+ LK + T + + EN++L++ L++ K + + LE EN Sbjct: 734 KEQLKKGLELLKASFKKTERLEVSYQGLDIENQRLQKTLENSNKKIQQLESELQDLEMEN 793 Query: 178 KKLVEDQEKLKTELRKTSDALSKAQNDVMEMKMQSERLSKEYDQLLKEHSELQHSS--FG 235 + L ++ E+LK +S L + + + ++ ++ +L K+ QL KE+ L+ + Sbjct: 794 QTLQKNLEELKI----SSKRLEQLEKENKSLEQETSQLEKDKKQLEKENKRLRQQAEIKD 849 Query: 236 EFLSKRSHKNGSIGKQTGSRKGSFRKRQQEKTVNFIKDTC 275 L + + K G++ K+ + K + K++C Sbjct: 850 TTLEENNVKIGNLEKE---------NKTLSKEIGIYKESC 880 Score = 33.5 bits (75), Expect = 0.29 Identities = 40/177 (22%), Positives = 76/177 (42%), Gaps = 19/177 (10%) Query: 130 ELSNKGVLKTQAENTNKAAKKFMEENEKLKRILKSHGKDEECVL--EAENKKLVEDQEKL 187 EL++ +LK + EN + + E+L+ + S + +L E EN++L + E L Sbjct: 456 ELTSSRLLKLEMEN-----QSLTKTVEELRTTVDSVEGNASKILKMEKENQRLSKKVEIL 510 Query: 188 KTELRKTSDALSKAQN---DVMEMKMQSERLSKEYDQLLKEHSELQHSSFGEFLSKRSHK 244 + E+ + +L QN D+M+ K Q E+ + L+E+SE Q + + H Sbjct: 511 ENEIVQEKQSLQNCQNLSKDLMKEKAQLEKTI----ETLRENSERQIKILEQ---ENEHL 563 Query: 245 NGSIG--KQTGSRKGSFRKRQQEKTVNFIKDTCNILCQNDNFVMLASRKFKFRKMHY 299 N ++ +Q R + EK + ++ + + R+ K HY Sbjct: 564 NQTVSSLRQRSQISAEARVKDIEKENKILHESIKETSSKLSKIEFEKRQIKKELEHY 620 Score = 33.1 bits (74), Expect = 0.38 Identities = 46/190 (24%), Positives = 77/190 (40%), Gaps = 35/190 (18%) Query: 123 LITQLAKELSNKGVLKTQAENTNKAAKKFMEENEKLK-----------RILKSHG--KDE 169 LI Q + E N+ V+K + E+ ++++EKL+ ++ HG K Sbjct: 1128 LIQQSSLENENESVIK-EREDLKSLYDSLIKDHEKLELLHERQASEYESLISKHGTLKSA 1186 Query: 170 ECVLEAENKKL-------------VEDQEK-LKTELRKTSDALSKAQNDVMEMKM---QS 212 LE E++ L +ED EK LK E K + E K ++ Sbjct: 1187 HKNLEVEHRDLEDRYNQLLKQKGQLEDLEKMLKVEQEKMLLENKNHETVAAEYKKLCGEN 1246 Query: 213 ERLSKEYDQLLKEHSELQ--HSSFGEFLSKRSHKNGSIGKQTGSRKGSFRKRQQEKTVNF 270 +RL+ Y QLLKE LQ H + L+ + + + K + +Q + T Sbjct: 1247 DRLNHTYSQLLKETEVLQTDHKNLKSLLNNSKLEQTRLEAEFSKLKEQY--QQLDITSTK 1304 Query: 271 IKDTCNILCQ 280 + + C +L Q Sbjct: 1305 LNNQCELLSQ 1314 Score = 32.3 bits (72), Expect = 0.65 Identities = 45/183 (24%), Positives = 76/183 (41%), Gaps = 40/183 (21%) Query: 126 QLAKELSNKGVLKTQAENTNKAAKKFMEENEKLKRILKSH--GKDEECVLEAENKKLVED 183 +L K L + L Q E+ K + EEN +L+R ++S + L+ ENK+L + Sbjct: 674 KLKKTLDSFKNLTFQLESLEKENSQLDEENLELRRNVESLKCASMKMAQLQLENKELESE 733 Query: 184 QEKLK-------TELRKT-----------------SDALSKAQNDVMEMKMQSERLSKEY 219 +E+LK +KT L + + +++ + + L E Sbjct: 734 KEQLKKGLELLKASFKKTERLEVSYQGLDIENQRLQKTLENSNKKIQQLESELQDLEMEN 793 Query: 220 DQLLKEHSELQHSSFGEFLSKRSHKNGSIGKQTGS--------RKGSFRKRQQEKTVNFI 271 L K EL+ SS + L + +N S+ ++T K + R RQQ + I Sbjct: 794 QTLQKNLEELKISS--KRLEQLEKENKSLEQETSQLEKDKKQLEKENKRLRQQAE----I 847 Query: 272 KDT 274 KDT Sbjct: 848 KDT 850 Score = 32.3 bits (72), Expect = 0.65 Identities = 19/78 (24%), Positives = 40/78 (51%), Gaps = 2/78 (2%) Query: 153 EENEKLKRILKSHGKDEECVLEAENKKLVEDQEKLKTELRKTSDALSKAQNDVMEMKMQS 212 E E + +LK KD +E N L +++ LKT+L++ + Q ++ ++ Q+ Sbjct: 1032 ESQETTRELLKV--KDRLIEVERNNATLQAEKQALKTQLKQLETQNNNLQAQILALQRQT 1089 Query: 213 ERLSKEYDQLLKEHSELQ 230 L ++ L ++++LQ Sbjct: 1090 VSLQEQNTTLQTQNAKLQ 1107 Score = 32.0 bits (71), Expect = 0.84 Identities = 34/145 (23%), Positives = 61/145 (42%), Gaps = 19/145 (13%) Query: 119 RLVTLITQLAKELSNKGVLKTQAENTNKAAKKFMEENEKLKRILKSHGKDEECVLEAENK 178 RL+ + A + K LKTQ + + L+R S +++ L+ +N Sbjct: 1046 RLIEVERNNATLQAEKQALKTQLKQLETQNNNLQAQILALQRQTVSL-QEQNTTLQTQNA 1104 Query: 179 KLVEDQEKLKTE----LRKTSDAL---SKAQNDVMEMKMQSERLSKEYDQLLKEHSEL-- 229 KL + L ++ + + + L S +N+ + + E L YD L+K+H +L Sbjct: 1105 KLQVENSTLNSQSTSLMNQNAQLLIQQSSLENENESVIKEREDLKSLYDSLIKDHEKLEL 1164 Query: 230 ----QHSSFGEFLSKR-----SHKN 245 Q S + +SK +HKN Sbjct: 1165 LHERQASEYESLISKHGTLKSAHKN 1189 >gi|34878904 synaptonemal complex protein 1 [Homo sapiens] Length = 976 Score = 42.7 bits (99), Expect = 5e-04 Identities = 38/155 (24%), Positives = 70/155 (45%), Gaps = 17/155 (10%) Query: 126 QLAKELSNKGVLKTQAENTNKAAKKFMEENEKLKRILKSHGKDEECVLEAENKKLVEDQE 185 +L K N L+ Q EN NK ++ +EN+ LK+ + K V E + KL + E Sbjct: 593 KLDKSEENCNNLRKQVENKNKYIEELQQENKALKKKGTAESKQLN-VYEIKVNKLELELE 651 Query: 186 KLKTELRKTSDALSKAQNDVMEMKMQSERLSKEY-------DQLLKEHSEL----QH--S 232 K + + +D Q ++ + K+ E L +E D+ +K E+ QH + Sbjct: 652 SAKQKFGEITDTY---QKEIEDKKISEENLLEEVEKAKVIADEAVKLQKEIDKRCQHKIA 708 Query: 233 SFGEFLSKRSHKNGSIGKQTGSRKGSFRKRQQEKT 267 + K H+ I ++ S G ++ ++QE++ Sbjct: 709 EMVALMEKHKHQYDKIIEERDSELGLYKSKEQEQS 743 Score = 35.0 bits (79), Expect = 0.100 Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 12/79 (15%) Query: 154 ENEKLKRI-LKSHGKDEECVLEAENKKLVEDQEKLKTELRKTSDALSKAQNDVMEMKMQS 212 ENEKLK L SH L ENK+L ++ + EL+ Q D+ K Q Sbjct: 507 ENEKLKNTELTSHCNK----LSLENKELTQETSDMTLELK-------NQQEDINNNKKQE 555 Query: 213 ERLSKEYDQLLKEHSELQH 231 ER+ K+ + L + ++L++ Sbjct: 556 ERMLKQIENLQETETQLRN 574 >gi|148746195 trichohyalin [Homo sapiens] Length = 1943 Score = 42.4 bits (98), Expect = 6e-04 Identities = 34/140 (24%), Positives = 61/140 (43%), Gaps = 13/140 (9%) Query: 130 ELSNKGVLKTQAENTNKAAKKFMEENEKLKRILKSHGKDEECVLEAENKKLVEDQEKLKT 189 EL KG + Q + + + F EE EK + E VL E +KL E++ + + Sbjct: 217 ELRRKGREEKQQQRRERQDRVFQEEEEK-------EWRKRETVLRKEEEKLQEEEPQRQR 269 Query: 190 ELRKTSDALSKAQNDVMEMKMQSERLSKEYDQLLKEHSEL---QHSSFGEFLSKRSHKNG 246 EL++ + L K + + + Q E ++ Q L+ +L Q E +R + Sbjct: 270 ELQEEEEQLRKLERQELRRERQEE---EQQQQRLRREQQLRRKQEEERREQQEERREQQE 326 Query: 247 SIGKQTGSRKGSFRKRQQEK 266 +Q R+ R+ Q+E+ Sbjct: 327 RREQQEERREQQLRREQEER 346 Score = 36.2 bits (82), Expect = 0.045 Identities = 36/154 (23%), Positives = 69/154 (44%), Gaps = 18/154 (11%) Query: 137 LKTQAENTNKAAKKFMEENEKLKRILKS--------HGKDEECVLEAENKKLVED--QEK 186 L+ + E + K EE E+L++ L+S + E+ + E K+L ++ +++ Sbjct: 507 LRREQEERREQRLKRQEEEERLQQRLRSEQQLRREQEERREQLLKREEEKRLEQERREQR 566 Query: 187 LKTELRKTSDALSKAQNDVMEMKM---QSERLS-----KEYDQLLKEHSELQHSSFGEFL 238 LK E + D L K + + + ++ Q ERL +E ++L +E Q E Sbjct: 567 LKREQEERRDQLLKREEERRQQRLKREQEERLEQRLKREEVERLEQEERREQRLKREEPE 626 Query: 239 SKRSHKNGSIGKQTGSRKGSFRKRQQEKTVNFIK 272 +R + +Q R+ R+ QQE+ +K Sbjct: 627 EERRQQLLKSEEQEERRQQQLRREQQERREQRLK 660 Score = 34.7 bits (78), Expect = 0.13 Identities = 32/144 (22%), Positives = 64/144 (44%), Gaps = 21/144 (14%) Query: 154 ENEKLKRILKSHGKDEECVLEAENKKLVEDQEKLKTELRKTSDALSKAQNDVMEMKMQSE 213 E E+L+R + K + + E + L E++E+ + R+ +D + + +++ + + Sbjct: 1295 EEEQLEREEQKEAKRRDRKSQEEKQLLREEREEKRR--RQETDRKFREEEQLLQEREEQP 1352 Query: 214 RLSKEYDQLLKEHSELQHSSFG-EFLSKRSHKNGSIGKQTGSRKGSFRKRQQEKTVNFIK 272 +E D+ +E EL+H G +FL + R R+QE+ F+K Sbjct: 1353 LRRQERDRKFREE-ELRHQEQGRKFLEEEQ-----------------RLRRQERERKFLK 1394 Query: 273 DTCNILCQNDNFVMLASRKFKFRK 296 + + CQ + R KFR+ Sbjct: 1395 EEQQLRCQEREQQLRQDRDRKFRE 1418 Score = 30.8 bits (68), Expect = 1.9 Identities = 34/178 (19%), Positives = 78/178 (43%), Gaps = 30/178 (16%) Query: 149 KKFMEENEKLKRILKSHGKDEECVL----------EAENKKLVEDQEKLKTEL--RKTSD 196 +KF+EE ++L++ ++EE +L + ++K +E++++L+ + RK + Sbjct: 1446 RKFLEEEQQLRQERHRKFREEEQLLQEREEQQLHRQERDRKFLEEEQQLRRQERDRKFRE 1505 Query: 197 ALSKAQNDVMEMKMQSERLSKEYDQ--LLKEHSELQHSSFG-------------EFLSKR 241 ++Q + + ++L ++ Q L+E +L+ G E ++ Sbjct: 1506 QELRSQEPERKFLEEEQQLHRQQRQRKFLQEEQQLRRQERGQQRRQDRDRKFREEEQLRQ 1565 Query: 242 SHKNGSIGKQTGSRKGSFRK---RQQEKTVNFIKDTCNILCQNDNFVMLASRKFKFRK 296 + + +Q RK + R+QE+ F++D + Q + R KFR+ Sbjct: 1566 EREEQQLSRQERDRKFRLEEQKVRRQEQERKFMEDEQQLRRQEGQQQLRQERDRKFRE 1623 Score = 30.4 bits (67), Expect = 2.5 Identities = 27/129 (20%), Positives = 58/129 (44%), Gaps = 5/129 (3%) Query: 138 KTQAENTNKAAKKFMEENEKLKRILKSHGKDEECVLEAENKKLVEDQEKLKTELRKTSDA 197 ++Q + ++ + +EE K +R + L E + L E++E+L+ E R+ Sbjct: 864 RSQEQRRDQKWRWQLEEERKRRRHTLYAKPALQEQLRKEQQLLQEEEEELQREERE---- 919 Query: 198 LSKAQNDVMEMKMQSERLSKEYDQLLKEHSELQHSSFGEFLSKRSHKNGSIGKQTGSRKG 257 + + + + E+L +E +QLL+E E + E ++ K +Q + Sbjct: 920 -KRRRQEQERQYREEEQLQQEEEQLLREEREKRRRQERERQYRKDKKLQQKEEQLLGEEP 978 Query: 258 SFRKRQQEK 266 R+RQ+ + Sbjct: 979 EKRRRQERE 987 Score = 30.4 bits (67), Expect = 2.5 Identities = 24/129 (18%), Positives = 57/129 (44%), Gaps = 16/129 (12%) Query: 149 KKFMEENEKLKRILKSHGKDEECVLEAENKKLVEDQ----EKLKTELRKTSDALSKAQND 204 +KF+EE ++L+R E E K L E+Q ++ + +LR+ D + + Sbjct: 1374 RKFLEEEQRLRR------------QERERKFLKEEQQLRCQEREQQLRQDRDRKFREEEQ 1421 Query: 205 VMEMKMQSERLSKEYDQLLKEHSELQHSSFGEFLSKRSHKNGSIGKQTGSRKGSFRKRQQ 264 + + + + +E Q+ ++ E + + L + H+ +Q + + +Q Sbjct: 1422 QLSRQERDRKFREEEQQVRRQERERKFLEEEQQLRQERHRKFREEEQLLQEREEQQLHRQ 1481 Query: 265 EKTVNFIKD 273 E+ F+++ Sbjct: 1482 ERDRKFLEE 1490 Score = 30.0 bits (66), Expect = 3.2 Identities = 27/112 (24%), Positives = 53/112 (47%), Gaps = 13/112 (11%) Query: 129 KELSNKGVLKTQAENTNKAAKKFMEENEKLKRIL----------KSHGKDEECVLEAENK 178 +E K L+ Q + +KFME+ ++L+R + +DE+ + E E + Sbjct: 1575 QERDRKFRLEEQKVRRQEQERKFMEDEQQLRRQEGQQQLRQERDRKFREDEQLLQEREEQ 1634 Query: 179 KLVEDQEKLKTELRKTSDALSKAQNDVMEMKMQSERLSKEYDQLLKEHSELQ 230 +L QE+ + L + + + Q +++ +R +E +QLL+E E Q Sbjct: 1635 QL-HRQERDRKFLEE--EPQLRRQEREQQLRHDRDRKFREEEQLLQEGEEQQ 1683 Score = 28.9 bits (63), Expect = 7.1 Identities = 25/128 (19%), Positives = 51/128 (39%), Gaps = 3/128 (2%) Query: 142 ENTNKAAKKFMEENEKLKRILKSHGKDEECVLEAENKKLVEDQEKLKTELRKTSDALSKA 201 + K K +E E+ +R LK ++ E ++L +QE+ + + K + + Sbjct: 469 QERRKQQLKRDQEEERRERWLKLEEEERREQQERREQQLRREQEERREQRLKRQEEEERL 528 Query: 202 QNDVMEMKMQSERLSKEYDQLLKEHSEL---QHSSFGEFLSKRSHKNGSIGKQTGSRKGS 258 Q + + + +QLLK E Q ++ + + K+ R+ Sbjct: 529 QQRLRSEQQLRREQEERREQLLKREEEKRLEQERREQRLKREQEERRDQLLKREEERRQQ 588 Query: 259 FRKRQQEK 266 KR+QE+ Sbjct: 589 RLKREQEE 596 Score = 28.9 bits (63), Expect = 7.1 Identities = 22/128 (17%), Positives = 60/128 (46%), Gaps = 3/128 (2%) Query: 140 QAENTNKAAKKFMEENEKLKRILKSHGKDEECVLEAENKKLVEDQEKLKTELRKTSDALS 199 Q E + K+ E E+ +++LKS ++E + ++ +++LK E + + L Sbjct: 612 QEERREQRLKREEPEEERRQQLLKSEEQEERRQQQLRREQQERREQRLKRE--EEEERLE 669 Query: 200 KAQNDVMEMKMQSERLSKEYDQLLKEHSELQHSSF-GEFLSKRSHKNGSIGKQTGSRKGS 258 + E + + + L++E + +E + + + + S+ + + + ++G Sbjct: 670 QRLKREHEEERREQELAEEEQEQARERIKSRIPKWQWQLESEADARQSKVYSRPRKQEGQ 729 Query: 259 FRKRQQEK 266 R+++QE+ Sbjct: 730 RRRQEQEE 737 Score = 28.9 bits (63), Expect = 7.1 Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 14/77 (18%) Query: 153 EENEKLKRI-LKSHGKDEECVLEAENKKLVEDQEKLKTELRKTSDALSKAQNDVMEMKMQ 211 EE EK +R L+ ++EE V + E + L E+ EK + + ++ + Sbjct: 1126 EEREKRRRQELERQYREEEEVQQEEEQLLREEPEK-------------RRRQELERQYRE 1172 Query: 212 SERLSKEYDQLLKEHSE 228 E L +E +QLL+E E Sbjct: 1173 EEELQQEEEQLLREEQE 1189 Score = 28.5 bits (62), Expect = 9.3 Identities = 28/170 (16%), Positives = 75/170 (44%), Gaps = 9/170 (5%) Query: 128 AKELSNKGVLKTQAENTNKAAKKFMEENEKLKRILKSHGKDEECVLEAENKKLVEDQEKL 187 ++E K + + Q + + +KF++E ++L+R + G+ + + ++E+L Sbjct: 1510 SQEPERKFLEEEQQLHRQQRQRKFLQEEQQLRR--QERGQQR----RQDRDRKFREEEQL 1563 Query: 188 KTELRKTSDALSKAQND-VMEMKMQSERLSKEYDQLLKEHSELQHSSFGEFLSKRSHKNG 246 + E + LS+ + D ++ Q R ++ + +++ +L+ + L + + Sbjct: 1564 RQE--REEQQLSRQERDRKFRLEEQKVRRQEQERKFMEDEQQLRRQEGQQQLRQERDRKF 1621 Query: 247 SIGKQTGSRKGSFRKRQQEKTVNFIKDTCNILCQNDNFVMLASRKFKFRK 296 +Q + + +QE+ F+++ + Q + R KFR+ Sbjct: 1622 REDEQLLQEREEQQLHRQERDRKFLEEEPQLRRQEREQQLRHDRDRKFRE 1671 >gi|56961680 coiled-coil domain containing 147 [Homo sapiens] Length = 872 Score = 42.4 bits (98), Expect = 6e-04 Identities = 34/141 (24%), Positives = 66/141 (46%), Gaps = 13/141 (9%) Query: 116 VLRRLVTLITQLAKELSNKGVLKTQAENTNKAAKKFMEENEKLKRILKSHGKDEECVLEA 175 +L +V L LA+ + + E A +F +E ++ + + +E LE Sbjct: 165 LLSEVVKLRESLAQTTEQQQETERSKEEAEHAISQFQQEIQQRQNEASREFRKKE-KLEK 223 Query: 176 ENKKLVEDQEKLKTELR-------KTSDALSKAQNDVMEMKMQSERLSKEYDQLLKEHSE 228 E K++ D + +TE++ K+ + L K + + E K+ +ER +KE +Q +++ Sbjct: 224 ELKQIQADMDSRQTEIKALQQYVQKSKEELQKLEQQLKEQKILNERAAKELEQFQMRNAK 283 Query: 229 L-----QHSSFGEFLSKRSHK 244 L QHS E LS+ + + Sbjct: 284 LQQENEQHSLVCEQLSQENQQ 304 >gi|115511012 coiled-coil domain containing 136 [Homo sapiens] Length = 1154 Score = 40.4 bits (93), Expect = 0.002 Identities = 29/130 (22%), Positives = 60/130 (46%), Gaps = 3/130 (2%) Query: 138 KTQAENTNKAAKKFMEENEKLKRILKSHGKDEECVLEAENKKLVEDQEKLKTELRKTSDA 197 K+ N NK +K ME+ + L+ ++ G+ ++ +L+ E +L+E++++L+ +L+ + Sbjct: 668 KSSKCNRNKQSKLLMEQMQALQ-VMYDAGQAKQELLQQEQGRLLEERKRLQADLQLCLEE 726 Query: 198 LSKAQNDVMEMKMQSERLSKEYDQLLKEHSELQHSSFGEFLSKRSHKNGSIGKQTGSRKG 257 + Q +KM E K Y ++ + + + S+ QT S+ Sbjct: 727 MQLLQVQSPSIKMSLESYGKSYGSMVPSNENCRKTYDTTVDDNESYYKSYTSTQTSSK-- 784 Query: 258 SFRKRQQEKT 267 SF K T Sbjct: 785 SFLKSYDSST 794 Score = 29.6 bits (65), Expect = 4.2 Identities = 32/124 (25%), Positives = 55/124 (44%), Gaps = 24/124 (19%) Query: 141 AENTNKAAKKFMEENEKLKRILKSHGK--DEECVLEAENKKLVEDQEKLKTELRK----- 193 A + + E EK K K G+ E+C L + +++ E+Q +L+ EL + Sbjct: 533 ANKCDTLLSRLTELQEKYKASQKEMGQLQMEQCELLEDQRRMQEEQGQLQEELHRLTLPL 592 Query: 194 -TSDALSKAQ------NDVMEMKM-------QSERLSKEYDQLLKEHSELQHSSFGEFLS 239 S L K+Q D+ E+++ + ++L + D +LKE E+ H F Sbjct: 593 PKSGLLLKSQELLTKLEDLCELQLLYQGMQEEQKKLIQNQDCVLKEQLEI-HEELRRF-- 649 Query: 240 KRSH 243 K SH Sbjct: 650 KESH 653 >gi|223634475 golgi autoantigen, golgin subfamily a, 6D [Homo sapiens] Length = 693 Score = 40.0 bits (92), Expect = 0.003 Identities = 35/149 (23%), Positives = 64/149 (42%), Gaps = 23/149 (15%) Query: 134 KGVLKTQAENT------NKAAKKFMEENEKLKRILKSHGKDEECVLEAENKKLVEDQEKL 187 +G L++Q EN +K K+ ++E E++ R ++E E ++L E E+L Sbjct: 315 EGKLQSQVENNQALSLLSKEQKQRLQEQEEMLR-------EQEAQRVREQERLCEQNERL 367 Query: 188 KTELRKTSDALSKAQNDVMEMKMQSERLSKEYDQLLKEHSELQHS-----SFGEFLSKRS 242 + + + + + + ++ Q ERL KE ++L K+ L E L K+ Sbjct: 368 REQQKTLQEQGERLRKQEQRLRKQEERLRKEEERLQKQEKRLWDQEERLWKKEERLQKQE 427 Query: 243 HK-----NGSIGKQTGSRKGSFRKRQQEK 266 + N + KQ + SF EK Sbjct: 428 ERLALSQNHKLDKQLAEPQCSFEDLNNEK 456 >gi|51472437 PREDICTED: golgi autoantigen, golgin subfamily a, 6C isoform 1 [Homo sapiens] Length = 693 Score = 40.0 bits (92), Expect = 0.003 Identities = 35/149 (23%), Positives = 64/149 (42%), Gaps = 23/149 (15%) Query: 134 KGVLKTQAENT------NKAAKKFMEENEKLKRILKSHGKDEECVLEAENKKLVEDQEKL 187 +G L++Q EN +K K+ ++E E++ R ++E E ++L E E+L Sbjct: 315 EGKLQSQVENNQALSLLSKEQKQRLQEQEEMLR-------EQEAQRVREQERLCEQNERL 367 Query: 188 KTELRKTSDALSKAQNDVMEMKMQSERLSKEYDQLLKEHSELQHS-----SFGEFLSKRS 242 + + + + + + ++ Q ERL KE ++L K+ L E L K+ Sbjct: 368 REQQKTLQEQGERLRKQEQRLRKQEERLRKEEERLQKQEKRLWDQEERLWKKEERLQKQE 427 Query: 243 HK-----NGSIGKQTGSRKGSFRKRQQEK 266 + N + KQ + SF EK Sbjct: 428 ERLALSQNHKLDKQLAEPQCSFEDLNNEK 456 >gi|41322923 plectin 1 isoform 11 [Homo sapiens] Length = 4547 Score = 40.0 bits (92), Expect = 0.003 Identities = 22/106 (20%), Positives = 55/106 (51%), Gaps = 3/106 (2%) Query: 116 VLRRLVTLITQLAKELSNKGVLKTQAENTNKAAKKFMEENEKLKRILKSHGKDEECVLEA 175 +L+ + + + + + +L+ Q E + A++ E+ E++ + L + + LEA Sbjct: 2311 MLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLAEETQGFQRTLEA 2370 Query: 176 ENKKLVE---DQEKLKTELRKTSDALSKAQNDVMEMKMQSERLSKE 218 E ++ +E + E+LK + + S A ++A+ D + Q+E + ++ Sbjct: 2371 ERQRQLEMSAEAERLKLRVAEMSRAQARAEEDAQRFRKQAEEIGEK 2416 Score = 35.0 bits (79), Expect = 0.100 Identities = 31/128 (24%), Positives = 62/128 (48%), Gaps = 11/128 (8%) Query: 137 LKTQAENTNKAAKKFMEENEKLKRILKSHGKDEECVLEAENKKLVEDQEKLKTELRKTSD 196 LKT+AE A K+ ENE+L+R+ + + E + + +E+L +LRK SD Sbjct: 1848 LKTEAEI---ALKEKEAENERLRRLAEDEAFQRRRLEEQAAQHKADIEERL-AQLRKASD 1903 Query: 197 ALSKAQNDVMEMKMQSERLSKEYDQLLKEHSELQHSSFGEFLSKRSHKNGSIGKQTGSRK 256 + + Q ++E ++ R +E LK +SF + + ++ +G+ + + Sbjct: 1904 SELERQKGLVEDTLRQRRQVEEEILALK-------ASFEKAAAGKAELELELGRIRSNAE 1956 Query: 257 GSFRKRQQ 264 + R ++Q Sbjct: 1957 DTLRSKEQ 1964 Score = 31.2 bits (69), Expect = 1.4 Identities = 31/143 (21%), Positives = 68/143 (47%), Gaps = 17/143 (11%) Query: 126 QLAKELSNKGVLKTQAENT----NKAAKKFMEENEKL-KRILKSHGKDEECVL------- 173 +L KE + + QAE +AA ME+++K ++ L+ + E+ + Sbjct: 2137 KLRKEAEQEAARRAQAEQAALRQKQAADAEMEKHKKFAEQTLRQKAQVEQELTTLRLQLE 2196 Query: 174 EAENKKLVEDQE--KLKTELRKTSDALSKAQNDVMEMKMQSERLSKEYDQLLKEHSEL-- 229 E +++K + D+E +LK E + + S+ + ++ +++Q E LSK ++ E+ L Sbjct: 2197 ETDHQKNLLDEELQRLKAEATEAARQRSQVEEELFSVRVQMEELSKLKARIEAENRALIL 2256 Query: 230 -QHSSFGEFLSKRSHKNGSIGKQ 251 + FL + + K + ++ Sbjct: 2257 RDKDNTQRFLQEEAEKMKQVAEE 2279 Score = 29.6 bits (65), Expect = 4.2 Identities = 20/113 (17%), Positives = 59/113 (52%), Gaps = 5/113 (4%) Query: 124 ITQLAKELSNKGVLKTQAENTNKAAKKFMEENEKLKRILKSHGKDEECVLEAENKKL--- 180 + +L ++ L+ +AE ++A++ E ++ L++ K ++ + ++L Sbjct: 2011 VERLKAKVEEARRLRERAEQ--ESARQLQLAQEAAQKRLQAEEKAHAFAVQQKEQELQQT 2068 Query: 181 VEDQEKLKTELRKTSDALSKAQNDVMEMKMQSERLSKEYDQLLKEHSELQHSS 233 ++ ++ + +LR ++A +A + E ++Q+ER + + + ++E L+ S+ Sbjct: 2069 LQQEQSVLDQLRGEAEAARRAAEEAEEARVQAEREAAQSRRQVEEAERLKQSA 2121 >gi|41322914 plectin 1 isoform 10 [Homo sapiens] Length = 4551 Score = 40.0 bits (92), Expect = 0.003 Identities = 22/106 (20%), Positives = 55/106 (51%), Gaps = 3/106 (2%) Query: 116 VLRRLVTLITQLAKELSNKGVLKTQAENTNKAAKKFMEENEKLKRILKSHGKDEECVLEA 175 +L+ + + + + + +L+ Q E + A++ E+ E++ + L + + LEA Sbjct: 2315 MLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLAEETQGFQRTLEA 2374 Query: 176 ENKKLVE---DQEKLKTELRKTSDALSKAQNDVMEMKMQSERLSKE 218 E ++ +E + E+LK + + S A ++A+ D + Q+E + ++ Sbjct: 2375 ERQRQLEMSAEAERLKLRVAEMSRAQARAEEDAQRFRKQAEEIGEK 2420 Score = 35.0 bits (79), Expect = 0.100 Identities = 31/128 (24%), Positives = 62/128 (48%), Gaps = 11/128 (8%) Query: 137 LKTQAENTNKAAKKFMEENEKLKRILKSHGKDEECVLEAENKKLVEDQEKLKTELRKTSD 196 LKT+AE A K+ ENE+L+R+ + + E + + +E+L +LRK SD Sbjct: 1852 LKTEAEI---ALKEKEAENERLRRLAEDEAFQRRRLEEQAAQHKADIEERL-AQLRKASD 1907 Query: 197 ALSKAQNDVMEMKMQSERLSKEYDQLLKEHSELQHSSFGEFLSKRSHKNGSIGKQTGSRK 256 + + Q ++E ++ R +E LK +SF + + ++ +G+ + + Sbjct: 1908 SELERQKGLVEDTLRQRRQVEEEILALK-------ASFEKAAAGKAELELELGRIRSNAE 1960 Query: 257 GSFRKRQQ 264 + R ++Q Sbjct: 1961 DTLRSKEQ 1968 Score = 31.2 bits (69), Expect = 1.4 Identities = 31/143 (21%), Positives = 68/143 (47%), Gaps = 17/143 (11%) Query: 126 QLAKELSNKGVLKTQAENT----NKAAKKFMEENEKL-KRILKSHGKDEECVL------- 173 +L KE + + QAE +AA ME+++K ++ L+ + E+ + Sbjct: 2141 KLRKEAEQEAARRAQAEQAALRQKQAADAEMEKHKKFAEQTLRQKAQVEQELTTLRLQLE 2200 Query: 174 EAENKKLVEDQE--KLKTELRKTSDALSKAQNDVMEMKMQSERLSKEYDQLLKEHSEL-- 229 E +++K + D+E +LK E + + S+ + ++ +++Q E LSK ++ E+ L Sbjct: 2201 ETDHQKNLLDEELQRLKAEATEAARQRSQVEEELFSVRVQMEELSKLKARIEAENRALIL 2260 Query: 230 -QHSSFGEFLSKRSHKNGSIGKQ 251 + FL + + K + ++ Sbjct: 2261 RDKDNTQRFLQEEAEKMKQVAEE 2283 Score = 29.6 bits (65), Expect = 4.2 Identities = 20/113 (17%), Positives = 59/113 (52%), Gaps = 5/113 (4%) Query: 124 ITQLAKELSNKGVLKTQAENTNKAAKKFMEENEKLKRILKSHGKDEECVLEAENKKL--- 180 + +L ++ L+ +AE ++A++ E ++ L++ K ++ + ++L Sbjct: 2015 VERLKAKVEEARRLRERAEQ--ESARQLQLAQEAAQKRLQAEEKAHAFAVQQKEQELQQT 2072 Query: 181 VEDQEKLKTELRKTSDALSKAQNDVMEMKMQSERLSKEYDQLLKEHSELQHSS 233 ++ ++ + +LR ++A +A + E ++Q+ER + + + ++E L+ S+ Sbjct: 2073 LQQEQSVLDQLRGEAEAARRAAEEAEEARVQAEREAAQSRRQVEEAERLKQSA 2125 >gi|41322919 plectin 1 isoform 8 [Homo sapiens] Length = 4547 Score = 40.0 bits (92), Expect = 0.003 Identities = 22/106 (20%), Positives = 55/106 (51%), Gaps = 3/106 (2%) Query: 116 VLRRLVTLITQLAKELSNKGVLKTQAENTNKAAKKFMEENEKLKRILKSHGKDEECVLEA 175 +L+ + + + + + +L+ Q E + A++ E+ E++ + L + + LEA Sbjct: 2311 MLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLAEETQGFQRTLEA 2370 Query: 176 ENKKLVE---DQEKLKTELRKTSDALSKAQNDVMEMKMQSERLSKE 218 E ++ +E + E+LK + + S A ++A+ D + Q+E + ++ Sbjct: 2371 ERQRQLEMSAEAERLKLRVAEMSRAQARAEEDAQRFRKQAEEIGEK 2416 Score = 35.0 bits (79), Expect = 0.100 Identities = 31/128 (24%), Positives = 62/128 (48%), Gaps = 11/128 (8%) Query: 137 LKTQAENTNKAAKKFMEENEKLKRILKSHGKDEECVLEAENKKLVEDQEKLKTELRKTSD 196 LKT+AE A K+ ENE+L+R+ + + E + + +E+L +LRK SD Sbjct: 1848 LKTEAEI---ALKEKEAENERLRRLAEDEAFQRRRLEEQAAQHKADIEERL-AQLRKASD 1903 Query: 197 ALSKAQNDVMEMKMQSERLSKEYDQLLKEHSELQHSSFGEFLSKRSHKNGSIGKQTGSRK 256 + + Q ++E ++ R +E LK +SF + + ++ +G+ + + Sbjct: 1904 SELERQKGLVEDTLRQRRQVEEEILALK-------ASFEKAAAGKAELELELGRIRSNAE 1956 Query: 257 GSFRKRQQ 264 + R ++Q Sbjct: 1957 DTLRSKEQ 1964 Score = 31.2 bits (69), Expect = 1.4 Identities = 31/143 (21%), Positives = 68/143 (47%), Gaps = 17/143 (11%) Query: 126 QLAKELSNKGVLKTQAENT----NKAAKKFMEENEKL-KRILKSHGKDEECVL------- 173 +L KE + + QAE +AA ME+++K ++ L+ + E+ + Sbjct: 2137 KLRKEAEQEAARRAQAEQAALRQKQAADAEMEKHKKFAEQTLRQKAQVEQELTTLRLQLE 2196 Query: 174 EAENKKLVEDQE--KLKTELRKTSDALSKAQNDVMEMKMQSERLSKEYDQLLKEHSEL-- 229 E +++K + D+E +LK E + + S+ + ++ +++Q E LSK ++ E+ L Sbjct: 2197 ETDHQKNLLDEELQRLKAEATEAARQRSQVEEELFSVRVQMEELSKLKARIEAENRALIL 2256 Query: 230 -QHSSFGEFLSKRSHKNGSIGKQ 251 + FL + + K + ++ Sbjct: 2257 RDKDNTQRFLQEEAEKMKQVAEE 2279 Score = 29.6 bits (65), Expect = 4.2 Identities = 20/113 (17%), Positives = 59/113 (52%), Gaps = 5/113 (4%) Query: 124 ITQLAKELSNKGVLKTQAENTNKAAKKFMEENEKLKRILKSHGKDEECVLEAENKKL--- 180 + +L ++ L+ +AE ++A++ E ++ L++ K ++ + ++L Sbjct: 2011 VERLKAKVEEARRLRERAEQ--ESARQLQLAQEAAQKRLQAEEKAHAFAVQQKEQELQQT 2068 Query: 181 VEDQEKLKTELRKTSDALSKAQNDVMEMKMQSERLSKEYDQLLKEHSELQHSS 233 ++ ++ + +LR ++A +A + E ++Q+ER + + + ++E L+ S+ Sbjct: 2069 LQQEQSVLDQLRGEAEAARRAAEEAEEARVQAEREAAQSRRQVEEAERLKQSA 2121 >gi|41322910 plectin 1 isoform 7 [Homo sapiens] Length = 4515 Score = 40.0 bits (92), Expect = 0.003 Identities = 22/106 (20%), Positives = 55/106 (51%), Gaps = 3/106 (2%) Query: 116 VLRRLVTLITQLAKELSNKGVLKTQAENTNKAAKKFMEENEKLKRILKSHGKDEECVLEA 175 +L+ + + + + + +L+ Q E + A++ E+ E++ + L + + LEA Sbjct: 2279 MLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLAEETQGFQRTLEA 2338 Query: 176 ENKKLVE---DQEKLKTELRKTSDALSKAQNDVMEMKMQSERLSKE 218 E ++ +E + E+LK + + S A ++A+ D + Q+E + ++ Sbjct: 2339 ERQRQLEMSAEAERLKLRVAEMSRAQARAEEDAQRFRKQAEEIGEK 2384 Score = 35.0 bits (79), Expect = 0.100 Identities = 31/128 (24%), Positives = 62/128 (48%), Gaps = 11/128 (8%) Query: 137 LKTQAENTNKAAKKFMEENEKLKRILKSHGKDEECVLEAENKKLVEDQEKLKTELRKTSD 196 LKT+AE A K+ ENE+L+R+ + + E + + +E+L +LRK SD Sbjct: 1816 LKTEAEI---ALKEKEAENERLRRLAEDEAFQRRRLEEQAAQHKADIEERL-AQLRKASD 1871 Query: 197 ALSKAQNDVMEMKMQSERLSKEYDQLLKEHSELQHSSFGEFLSKRSHKNGSIGKQTGSRK 256 + + Q ++E ++ R +E LK +SF + + ++ +G+ + + Sbjct: 1872 SELERQKGLVEDTLRQRRQVEEEILALK-------ASFEKAAAGKAELELELGRIRSNAE 1924 Query: 257 GSFRKRQQ 264 + R ++Q Sbjct: 1925 DTLRSKEQ 1932 Score = 31.2 bits (69), Expect = 1.4 Identities = 31/143 (21%), Positives = 68/143 (47%), Gaps = 17/143 (11%) Query: 126 QLAKELSNKGVLKTQAENT----NKAAKKFMEENEKL-KRILKSHGKDEECVL------- 173 +L KE + + QAE +AA ME+++K ++ L+ + E+ + Sbjct: 2105 KLRKEAEQEAARRAQAEQAALRQKQAADAEMEKHKKFAEQTLRQKAQVEQELTTLRLQLE 2164 Query: 174 EAENKKLVEDQE--KLKTELRKTSDALSKAQNDVMEMKMQSERLSKEYDQLLKEHSEL-- 229 E +++K + D+E +LK E + + S+ + ++ +++Q E LSK ++ E+ L Sbjct: 2165 ETDHQKNLLDEELQRLKAEATEAARQRSQVEEELFSVRVQMEELSKLKARIEAENRALIL 2224 Query: 230 -QHSSFGEFLSKRSHKNGSIGKQ 251 + FL + + K + ++ Sbjct: 2225 RDKDNTQRFLQEEAEKMKQVAEE 2247 Score = 29.6 bits (65), Expect = 4.2 Identities = 20/113 (17%), Positives = 59/113 (52%), Gaps = 5/113 (4%) Query: 124 ITQLAKELSNKGVLKTQAENTNKAAKKFMEENEKLKRILKSHGKDEECVLEAENKKL--- 180 + +L ++ L+ +AE ++A++ E ++ L++ K ++ + ++L Sbjct: 1979 VERLKAKVEEARRLRERAEQ--ESARQLQLAQEAAQKRLQAEEKAHAFAVQQKEQELQQT 2036 Query: 181 VEDQEKLKTELRKTSDALSKAQNDVMEMKMQSERLSKEYDQLLKEHSELQHSS 233 ++ ++ + +LR ++A +A + E ++Q+ER + + + ++E L+ S+ Sbjct: 2037 LQQEQSVLDQLRGEAEAARRAAEEAEEARVQAEREAAQSRRQVEEAERLKQSA 2089 >gi|41322916 plectin 1 isoform 6 [Homo sapiens] Length = 4684 Score = 40.0 bits (92), Expect = 0.003 Identities = 22/106 (20%), Positives = 55/106 (51%), Gaps = 3/106 (2%) Query: 116 VLRRLVTLITQLAKELSNKGVLKTQAENTNKAAKKFMEENEKLKRILKSHGKDEECVLEA 175 +L+ + + + + + +L+ Q E + A++ E+ E++ + L + + LEA Sbjct: 2448 MLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLAEETQGFQRTLEA 2507 Query: 176 ENKKLVE---DQEKLKTELRKTSDALSKAQNDVMEMKMQSERLSKE 218 E ++ +E + E+LK + + S A ++A+ D + Q+E + ++ Sbjct: 2508 ERQRQLEMSAEAERLKLRVAEMSRAQARAEEDAQRFRKQAEEIGEK 2553 Score = 35.0 bits (79), Expect = 0.100 Identities = 31/128 (24%), Positives = 62/128 (48%), Gaps = 11/128 (8%) Query: 137 LKTQAENTNKAAKKFMEENEKLKRILKSHGKDEECVLEAENKKLVEDQEKLKTELRKTSD 196 LKT+AE A K+ ENE+L+R+ + + E + + +E+L +LRK SD Sbjct: 1985 LKTEAEI---ALKEKEAENERLRRLAEDEAFQRRRLEEQAAQHKADIEERL-AQLRKASD 2040 Query: 197 ALSKAQNDVMEMKMQSERLSKEYDQLLKEHSELQHSSFGEFLSKRSHKNGSIGKQTGSRK 256 + + Q ++E ++ R +E LK +SF + + ++ +G+ + + Sbjct: 2041 SELERQKGLVEDTLRQRRQVEEEILALK-------ASFEKAAAGKAELELELGRIRSNAE 2093 Query: 257 GSFRKRQQ 264 + R ++Q Sbjct: 2094 DTLRSKEQ 2101 Score = 31.2 bits (69), Expect = 1.4 Identities = 31/143 (21%), Positives = 68/143 (47%), Gaps = 17/143 (11%) Query: 126 QLAKELSNKGVLKTQAENT----NKAAKKFMEENEKL-KRILKSHGKDEECVL------- 173 +L KE + + QAE +AA ME+++K ++ L+ + E+ + Sbjct: 2274 KLRKEAEQEAARRAQAEQAALRQKQAADAEMEKHKKFAEQTLRQKAQVEQELTTLRLQLE 2333 Query: 174 EAENKKLVEDQE--KLKTELRKTSDALSKAQNDVMEMKMQSERLSKEYDQLLKEHSEL-- 229 E +++K + D+E +LK E + + S+ + ++ +++Q E LSK ++ E+ L Sbjct: 2334 ETDHQKNLLDEELQRLKAEATEAARQRSQVEEELFSVRVQMEELSKLKARIEAENRALIL 2393 Query: 230 -QHSSFGEFLSKRSHKNGSIGKQ 251 + FL + + K + ++ Sbjct: 2394 RDKDNTQRFLQEEAEKMKQVAEE 2416 Score = 29.6 bits (65), Expect = 4.2 Identities = 20/113 (17%), Positives = 59/113 (52%), Gaps = 5/113 (4%) Query: 124 ITQLAKELSNKGVLKTQAENTNKAAKKFMEENEKLKRILKSHGKDEECVLEAENKKL--- 180 + +L ++ L+ +AE ++A++ E ++ L++ K ++ + ++L Sbjct: 2148 VERLKAKVEEARRLRERAEQ--ESARQLQLAQEAAQKRLQAEEKAHAFAVQQKEQELQQT 2205 Query: 181 VEDQEKLKTELRKTSDALSKAQNDVMEMKMQSERLSKEYDQLLKEHSELQHSS 233 ++ ++ + +LR ++A +A + E ++Q+ER + + + ++E L+ S+ Sbjct: 2206 LQQEQSVLDQLRGEAEAARRAAEEAEEARVQAEREAAQSRRQVEEAERLKQSA 2258 >gi|41322908 plectin 1 isoform 3 [Homo sapiens] Length = 4525 Score = 40.0 bits (92), Expect = 0.003 Identities = 22/106 (20%), Positives = 55/106 (51%), Gaps = 3/106 (2%) Query: 116 VLRRLVTLITQLAKELSNKGVLKTQAENTNKAAKKFMEENEKLKRILKSHGKDEECVLEA 175 +L+ + + + + + +L+ Q E + A++ E+ E++ + L + + LEA Sbjct: 2289 MLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLAEETQGFQRTLEA 2348 Query: 176 ENKKLVE---DQEKLKTELRKTSDALSKAQNDVMEMKMQSERLSKE 218 E ++ +E + E+LK + + S A ++A+ D + Q+E + ++ Sbjct: 2349 ERQRQLEMSAEAERLKLRVAEMSRAQARAEEDAQRFRKQAEEIGEK 2394 Score = 35.0 bits (79), Expect = 0.100 Identities = 31/128 (24%), Positives = 62/128 (48%), Gaps = 11/128 (8%) Query: 137 LKTQAENTNKAAKKFMEENEKLKRILKSHGKDEECVLEAENKKLVEDQEKLKTELRKTSD 196 LKT+AE A K+ ENE+L+R+ + + E + + +E+L +LRK SD Sbjct: 1826 LKTEAEI---ALKEKEAENERLRRLAEDEAFQRRRLEEQAAQHKADIEERL-AQLRKASD 1881 Query: 197 ALSKAQNDVMEMKMQSERLSKEYDQLLKEHSELQHSSFGEFLSKRSHKNGSIGKQTGSRK 256 + + Q ++E ++ R +E LK +SF + + ++ +G+ + + Sbjct: 1882 SELERQKGLVEDTLRQRRQVEEEILALK-------ASFEKAAAGKAELELELGRIRSNAE 1934 Query: 257 GSFRKRQQ 264 + R ++Q Sbjct: 1935 DTLRSKEQ 1942 Score = 31.2 bits (69), Expect = 1.4 Identities = 31/143 (21%), Positives = 68/143 (47%), Gaps = 17/143 (11%) Query: 126 QLAKELSNKGVLKTQAENT----NKAAKKFMEENEKL-KRILKSHGKDEECVL------- 173 +L KE + + QAE +AA ME+++K ++ L+ + E+ + Sbjct: 2115 KLRKEAEQEAARRAQAEQAALRQKQAADAEMEKHKKFAEQTLRQKAQVEQELTTLRLQLE 2174 Query: 174 EAENKKLVEDQE--KLKTELRKTSDALSKAQNDVMEMKMQSERLSKEYDQLLKEHSEL-- 229 E +++K + D+E +LK E + + S+ + ++ +++Q E LSK ++ E+ L Sbjct: 2175 ETDHQKNLLDEELQRLKAEATEAARQRSQVEEELFSVRVQMEELSKLKARIEAENRALIL 2234 Query: 230 -QHSSFGEFLSKRSHKNGSIGKQ 251 + FL + + K + ++ Sbjct: 2235 RDKDNTQRFLQEEAEKMKQVAEE 2257 Score = 29.6 bits (65), Expect = 4.2 Identities = 20/113 (17%), Positives = 59/113 (52%), Gaps = 5/113 (4%) Query: 124 ITQLAKELSNKGVLKTQAENTNKAAKKFMEENEKLKRILKSHGKDEECVLEAENKKL--- 180 + +L ++ L+ +AE ++A++ E ++ L++ K ++ + ++L Sbjct: 1989 VERLKAKVEEARRLRERAEQ--ESARQLQLAQEAAQKRLQAEEKAHAFAVQQKEQELQQT 2046 Query: 181 VEDQEKLKTELRKTSDALSKAQNDVMEMKMQSERLSKEYDQLLKEHSELQHSS 233 ++ ++ + +LR ++A +A + E ++Q+ER + + + ++E L+ S+ Sbjct: 2047 LQQEQSVLDQLRGEAEAARRAAEEAEEARVQAEREAAQSRRQVEEAERLKQSA 2099 >gi|41322912 plectin 1 isoform 2 [Homo sapiens] Length = 4533 Score = 40.0 bits (92), Expect = 0.003 Identities = 22/106 (20%), Positives = 55/106 (51%), Gaps = 3/106 (2%) Query: 116 VLRRLVTLITQLAKELSNKGVLKTQAENTNKAAKKFMEENEKLKRILKSHGKDEECVLEA 175 +L+ + + + + + +L+ Q E + A++ E+ E++ + L + + LEA Sbjct: 2297 MLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLAEETQGFQRTLEA 2356 Query: 176 ENKKLVE---DQEKLKTELRKTSDALSKAQNDVMEMKMQSERLSKE 218 E ++ +E + E+LK + + S A ++A+ D + Q+E + ++ Sbjct: 2357 ERQRQLEMSAEAERLKLRVAEMSRAQARAEEDAQRFRKQAEEIGEK 2402 Score = 35.0 bits (79), Expect = 0.100 Identities = 31/128 (24%), Positives = 62/128 (48%), Gaps = 11/128 (8%) Query: 137 LKTQAENTNKAAKKFMEENEKLKRILKSHGKDEECVLEAENKKLVEDQEKLKTELRKTSD 196 LKT+AE A K+ ENE+L+R+ + + E + + +E+L +LRK SD Sbjct: 1834 LKTEAEI---ALKEKEAENERLRRLAEDEAFQRRRLEEQAAQHKADIEERL-AQLRKASD 1889 Query: 197 ALSKAQNDVMEMKMQSERLSKEYDQLLKEHSELQHSSFGEFLSKRSHKNGSIGKQTGSRK 256 + + Q ++E ++ R +E LK +SF + + ++ +G+ + + Sbjct: 1890 SELERQKGLVEDTLRQRRQVEEEILALK-------ASFEKAAAGKAELELELGRIRSNAE 1942 Query: 257 GSFRKRQQ 264 + R ++Q Sbjct: 1943 DTLRSKEQ 1950 Score = 31.2 bits (69), Expect = 1.4 Identities = 31/143 (21%), Positives = 68/143 (47%), Gaps = 17/143 (11%) Query: 126 QLAKELSNKGVLKTQAENT----NKAAKKFMEENEKL-KRILKSHGKDEECVL------- 173 +L KE + + QAE +AA ME+++K ++ L+ + E+ + Sbjct: 2123 KLRKEAEQEAARRAQAEQAALRQKQAADAEMEKHKKFAEQTLRQKAQVEQELTTLRLQLE 2182 Query: 174 EAENKKLVEDQE--KLKTELRKTSDALSKAQNDVMEMKMQSERLSKEYDQLLKEHSEL-- 229 E +++K + D+E +LK E + + S+ + ++ +++Q E LSK ++ E+ L Sbjct: 2183 ETDHQKNLLDEELQRLKAEATEAARQRSQVEEELFSVRVQMEELSKLKARIEAENRALIL 2242 Query: 230 -QHSSFGEFLSKRSHKNGSIGKQ 251 + FL + + K + ++ Sbjct: 2243 RDKDNTQRFLQEEAEKMKQVAEE 2265 Score = 29.6 bits (65), Expect = 4.2 Identities = 20/113 (17%), Positives = 59/113 (52%), Gaps = 5/113 (4%) Query: 124 ITQLAKELSNKGVLKTQAENTNKAAKKFMEENEKLKRILKSHGKDEECVLEAENKKL--- 180 + +L ++ L+ +AE ++A++ E ++ L++ K ++ + ++L Sbjct: 1997 VERLKAKVEEARRLRERAEQ--ESARQLQLAQEAAQKRLQAEEKAHAFAVQQKEQELQQT 2054 Query: 181 VEDQEKLKTELRKTSDALSKAQNDVMEMKMQSERLSKEYDQLLKEHSELQHSS 233 ++ ++ + +LR ++A +A + E ++Q+ER + + + ++E L+ S+ Sbjct: 2055 LQQEQSVLDQLRGEAEAARRAAEEAEEARVQAEREAAQSRRQVEEAERLKQSA 2107 >gi|47607492 plectin 1 isoform 1 [Homo sapiens] Length = 4574 Score = 40.0 bits (92), Expect = 0.003 Identities = 22/106 (20%), Positives = 55/106 (51%), Gaps = 3/106 (2%) Query: 116 VLRRLVTLITQLAKELSNKGVLKTQAENTNKAAKKFMEENEKLKRILKSHGKDEECVLEA 175 +L+ + + + + + +L+ Q E + A++ E+ E++ + L + + LEA Sbjct: 2338 MLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLAEETQGFQRTLEA 2397 Query: 176 ENKKLVE---DQEKLKTELRKTSDALSKAQNDVMEMKMQSERLSKE 218 E ++ +E + E+LK + + S A ++A+ D + Q+E + ++ Sbjct: 2398 ERQRQLEMSAEAERLKLRVAEMSRAQARAEEDAQRFRKQAEEIGEK 2443 Score = 35.0 bits (79), Expect = 0.100 Identities = 31/128 (24%), Positives = 62/128 (48%), Gaps = 11/128 (8%) Query: 137 LKTQAENTNKAAKKFMEENEKLKRILKSHGKDEECVLEAENKKLVEDQEKLKTELRKTSD 196 LKT+AE A K+ ENE+L+R+ + + E + + +E+L +LRK SD Sbjct: 1875 LKTEAEI---ALKEKEAENERLRRLAEDEAFQRRRLEEQAAQHKADIEERL-AQLRKASD 1930 Query: 197 ALSKAQNDVMEMKMQSERLSKEYDQLLKEHSELQHSSFGEFLSKRSHKNGSIGKQTGSRK 256 + + Q ++E ++ R +E LK +SF + + ++ +G+ + + Sbjct: 1931 SELERQKGLVEDTLRQRRQVEEEILALK-------ASFEKAAAGKAELELELGRIRSNAE 1983 Query: 257 GSFRKRQQ 264 + R ++Q Sbjct: 1984 DTLRSKEQ 1991 Score = 31.2 bits (69), Expect = 1.4 Identities = 31/143 (21%), Positives = 68/143 (47%), Gaps = 17/143 (11%) Query: 126 QLAKELSNKGVLKTQAENT----NKAAKKFMEENEKL-KRILKSHGKDEECVL------- 173 +L KE + + QAE +AA ME+++K ++ L+ + E+ + Sbjct: 2164 KLRKEAEQEAARRAQAEQAALRQKQAADAEMEKHKKFAEQTLRQKAQVEQELTTLRLQLE 2223 Query: 174 EAENKKLVEDQE--KLKTELRKTSDALSKAQNDVMEMKMQSERLSKEYDQLLKEHSEL-- 229 E +++K + D+E +LK E + + S+ + ++ +++Q E LSK ++ E+ L Sbjct: 2224 ETDHQKNLLDEELQRLKAEATEAARQRSQVEEELFSVRVQMEELSKLKARIEAENRALIL 2283 Query: 230 -QHSSFGEFLSKRSHKNGSIGKQ 251 + FL + + K + ++ Sbjct: 2284 RDKDNTQRFLQEEAEKMKQVAEE 2306 Score = 29.6 bits (65), Expect = 4.2 Identities = 20/113 (17%), Positives = 59/113 (52%), Gaps = 5/113 (4%) Query: 124 ITQLAKELSNKGVLKTQAENTNKAAKKFMEENEKLKRILKSHGKDEECVLEAENKKL--- 180 + +L ++ L+ +AE ++A++ E ++ L++ K ++ + ++L Sbjct: 2038 VERLKAKVEEARRLRERAEQ--ESARQLQLAQEAAQKRLQAEEKAHAFAVQQKEQELQQT 2095 Query: 181 VEDQEKLKTELRKTSDALSKAQNDVMEMKMQSERLSKEYDQLLKEHSELQHSS 233 ++ ++ + +LR ++A +A + E ++Q+ER + + + ++E L+ S+ Sbjct: 2096 LQQEQSVLDQLRGEAEAARRAAEEAEEARVQAEREAAQSRRQVEEAERLKQSA 2148 >gi|187761324 shootin1 isoform a [Homo sapiens] Length = 631 Score = 40.0 bits (92), Expect = 0.003 Identities = 35/154 (22%), Positives = 69/154 (44%), Gaps = 12/154 (7%) Query: 118 RRLVTLITQLAKELSNKGVLKTQAENTNKAAKKFMEENEKLKR---ILKSHGKDEECVLE 174 +++ L Q+ K +L + EN + +EE K+K+ +L S ++ VLE Sbjct: 142 KQIKELRDQIVSVQEEKKILAIELENLKSKLVEVIEEVNKVKQEKTVLNSEVLEQRKVLE 201 Query: 175 AENKK---LVEDQEKLKTELRKTSDALSKAQNDVMEMKMQSERLSKEYDQLLKEHSELQH 231 N+ VE+ E+++ L D KA++ EM ++ +L ++ H LQ Sbjct: 202 KCNRVSMLAVEEYEEMQVNLELEKDLRKKAESFAQEMFIEQNKLKRQ------SHLLLQS 255 Query: 232 SSFGEFLSKRSHKNGSIGKQTGSRKGSFRKRQQE 265 S + L K +N + +Q + +++ +E Sbjct: 256 SIPDQQLLKALDENAKLTQQLEEERIQHQQKVKE 289 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.324 0.135 0.393 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 11,051,967 Number of Sequences: 37866 Number of extensions: 425868 Number of successful extensions: 4767 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 142 Number of HSP's successfully gapped in prelim test: 485 Number of HSP's that attempted gapping in prelim test: 3565 Number of HSP's gapped (non-prelim): 1615 length of query: 348 length of database: 18,247,518 effective HSP length: 103 effective length of query: 245 effective length of database: 14,347,320 effective search space: 3515093400 effective search space used: 3515093400 T: 11 A: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.6 bits) S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.