Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: DUSP13 Sequence: fasta or formatted (198aa) NCBI GI: 56237018
Description:

testis and skeletal muscle-specific dual specificity phosphatase isoform 6

Referenced in:

Dual-Specificity Phosphatases
Muscle
Testes and Sperm

Other entries for this name:
alt prot [188aa] muscle-restricted dual specificity phosphatase isoform 1
alt prot [248aa] testis and skeletal muscle-specific dual specificity phosphatase ...
alt prot [291aa] testis and skeletal muscle-specific dual specificity phosphatase ...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.6         21           3
 C cysteine            1.5          3           1
 D aspartate           5.1         10           2
 E glutamate           3.0          6           1
 F phenylalanine       4.5          9           2
 G glycine             6.1         12           1
 H histidine           2.5          5           1
 I isoleucine          4.5          9           1
 K lysine              3.0          6           1
 L leucine            12.1         24           2
 M methionine          2.5          5           1
 N asparagine          3.5          7           1
 P proline             4.5          9           2
 Q glutamine           6.6         13           1
 R arginine            7.6         15           2
 S serine              5.6         11           1
 T threonine           4.0          8           1
 V valine              8.1         16           2
 W tryptophan          1.0          2           1
 Y tyrosine            3.5          7           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   testis and skeletal muscle-specific dual specificity... 
DUSP13                1.000   testis and skeletal muscle-specific dual specificity...
DUSP13                1.000   testis and skeletal muscle-specific dual specificity...
DUPD1                 0.420   dual specificity phosphatase and pro isomerase domai...
DUSP26                0.383   dual specificity phosphatase 26 
DUSP13                0.340   muscle-restricted dual specificity phosphatase isofo...
DUSP27                0.334   dual specificity phosphatase 27 
DUSP3                 0.283   dual specificity phosphatase 3 
DUSP4                 0.148   dual specificity phosphatase 4 isoform 1 
DUSP4                 0.148   dual specificity phosphatase 4 isoform 2 
DUSP14                0.140   dual specificity phosphatase 14 
DUSP1                 0.137   dual specificity phosphatase 1 
DUSP21                0.132   dual specificity phosphatase 21 
DUSP18                0.129   dual specificity phosphatase 18 
SSH3                  0.127   slingshot homolog 3 
DUSP19                0.124   dual specificity phosphatase 19 isoform 1 
DUSP2                 0.121   dual specificity phosphatase 2 
DUSP22                0.121   dual specificity phosphatase 22 
DUSP10                0.108   dual specificity phosphatase 10 isoform a 
DUSP5                 0.108   dual specificity phosphatase 5 
DUSP9                 0.105   dual specificity phosphatase 9 
LOC100290651          0.102   PREDICTED: hypothetical protein XP_002347464 
STYX                  0.102   serine/threonine/tyrosine interacting protein [Homo...
STYX                  0.102   serine/threonine/tyrosine interacting protein 
DUSP28                0.100   dual specificity phosphatase 28 
DUSP7                 0.097   dual specificity phosphatase 7 
DUSP16                0.094   dual specificity phosphatase 16 
SSH2                  0.094   slingshot 2 
DUSP6                 0.092   dual specificity phosphatase 6 isoform a 
DUSP15                0.092   dual specificity phosphatase 15 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press