Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 55742695
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|55742695 sterile alpha motif domain containing 4B [Homo
sapiens]
(694 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|55742695 sterile alpha motif domain containing 4B [Homo sapiens] 1403 0.0
gi|239582747 sterile alpha motif domain containing 4 isoform 1 [... 825 0.0
gi|239582749 sterile alpha motif domain containing 4 isoform 2 [... 617 e-177
gi|239582751 sterile alpha motif domain containing 4 isoform 3 [... 315 9e-86
gi|149158690 HLA-B associated transcript-2 [Homo sapiens] 49 2e-05
gi|21735419 zinc finger, CCHC domain containing 14 [Homo sapiens] 48 3e-05
gi|33356148 formin-like 1 [Homo sapiens] 45 2e-04
gi|24308073 protein tyrosine phosphatase, non-receptor type 23 [... 45 3e-04
gi|153792074 proline rich 12 [Homo sapiens] 45 3e-04
gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens] 44 4e-04
gi|194248095 epsin 1 isoform b [Homo sapiens] 44 5e-04
gi|52485606 formin-like 2 [Homo sapiens] 44 7e-04
gi|209977046 fibrous sheath CABYR binding protein [Homo sapiens] 43 0.001
gi|157817073 Cdc2-related kinase, arginine/serine-rich isoform 2... 42 0.001
gi|157817023 Cdc2-related kinase, arginine/serine-rich isoform 1... 42 0.001
gi|6382071 diaphanous 2 isoform 12C [Homo sapiens] 42 0.003
gi|5803003 diaphanous 2 isoform 156 [Homo sapiens] 42 0.003
gi|41350201 epsin 1 isoform c [Homo sapiens] 42 0.003
gi|194272148 epsin 1 isoform a [Homo sapiens] 42 0.003
gi|112421108 capicua homolog [Homo sapiens] 41 0.003
gi|24497513 homeobox A3 isoform a [Homo sapiens] 41 0.004
gi|13562112 homeobox A3 isoform a [Homo sapiens] 41 0.004
gi|56682953 epidermal growth factor receptor pathway substrate 8... 41 0.004
gi|119395760 diaphanous 1 isoform 2 [Homo sapiens] 40 0.006
gi|119395758 diaphanous 1 isoform 1 [Homo sapiens] 40 0.006
gi|148536848 carboxyl ester lipase precursor [Homo sapiens] 40 0.006
gi|29826321 adducin 1 (alpha) isoform b [Homo sapiens] 40 0.006
gi|29826319 adducin 1 (alpha) isoform a [Homo sapiens] 40 0.006
gi|4507691 transformation/transcription domain-associated protei... 40 0.006
gi|116256445 nuclear receptor co-repressor 2 isoform 2 [Homo sap... 40 0.006
>gi|55742695 sterile alpha motif domain containing 4B [Homo sapiens]
Length = 694
Score = 1403 bits (3632), Expect = 0.0
Identities = 694/694 (100%), Positives = 694/694 (100%)
Query: 1 MMFRDQVGILAGWFKGWNECEQTVALLSLLKRVTRTQARFLQLCLEHSLADCNDIHLLES 60
MMFRDQVGILAGWFKGWNECEQTVALLSLLKRVTRTQARFLQLCLEHSLADCNDIHLLES
Sbjct: 1 MMFRDQVGILAGWFKGWNECEQTVALLSLLKRVTRTQARFLQLCLEHSLADCNDIHLLES 60
Query: 61 EANSAAIVSQWQQESKEKVVSLLLSHLPLLQPGNTEAKSEYMRLLQKVLAYSIESNAFIE 120
EANSAAIVSQWQQESKEKVVSLLLSHLPLLQPGNTEAKSEYMRLLQKVLAYSIESNAFIE
Sbjct: 61 EANSAAIVSQWQQESKEKVVSLLLSHLPLLQPGNTEAKSEYMRLLQKVLAYSIESNAFIE 120
Query: 121 ESRQLLSYALIHPATTLEDRNALALWLSHLEERLASGFRSRPEPSYHSRQGSDEWGGPAE 180
ESRQLLSYALIHPATTLEDRNALALWLSHLEERLASGFRSRPEPSYHSRQGSDEWGGPAE
Sbjct: 121 ESRQLLSYALIHPATTLEDRNALALWLSHLEERLASGFRSRPEPSYHSRQGSDEWGGPAE 180
Query: 181 LGPGEAGPGWQDKPPRENGHVPFHPSSSVPPAINSIGSNANTGLPCQIHPSPLKRSMSLI 240
LGPGEAGPGWQDKPPRENGHVPFHPSSSVPPAINSIGSNANTGLPCQIHPSPLKRSMSLI
Sbjct: 181 LGPGEAGPGWQDKPPRENGHVPFHPSSSVPPAINSIGSNANTGLPCQIHPSPLKRSMSLI 240
Query: 241 PTSPQVPGEWPSPEELGARAAFTTPDHAPLSPQSSVASSGSEQTEEQGSSRNTFQEDGSG 300
PTSPQVPGEWPSPEELGARAAFTTPDHAPLSPQSSVASSGSEQTEEQGSSRNTFQEDGSG
Sbjct: 241 PTSPQVPGEWPSPEELGARAAFTTPDHAPLSPQSSVASSGSEQTEEQGSSRNTFQEDGSG 300
Query: 301 MKDVPSWLKSLRLHKYAALFSQMSYEEMMTLTEQHLESQNVTKGARHKIALSIQKLRERQ 360
MKDVPSWLKSLRLHKYAALFSQMSYEEMMTLTEQHLESQNVTKGARHKIALSIQKLRERQ
Sbjct: 301 MKDVPSWLKSLRLHKYAALFSQMSYEEMMTLTEQHLESQNVTKGARHKIALSIQKLRERQ 360
Query: 361 SVLKSLEKDVLEGGNLRNALQELQQIIITPIKAYSVLQATVAAATTTPTAKDGAPGEPPL 420
SVLKSLEKDVLEGGNLRNALQELQQIIITPIKAYSVLQATVAAATTTPTAKDGAPGEPPL
Sbjct: 361 SVLKSLEKDVLEGGNLRNALQELQQIIITPIKAYSVLQATVAAATTTPTAKDGAPGEPPL 420
Query: 421 PGAEPPLAHPGTDKGTEAKDPPAVENYPPPPAPAPTDGSEPAPAPVADGDIPSQFTRVMG 480
PGAEPPLAHPGTDKGTEAKDPPAVENYPPPPAPAPTDGSEPAPAPVADGDIPSQFTRVMG
Sbjct: 421 PGAEPPLAHPGTDKGTEAKDPPAVENYPPPPAPAPTDGSEPAPAPVADGDIPSQFTRVMG 480
Query: 481 KVCTQLLVSRPDEENITSYLQLIEKCLTHEAFTETQKKRLLSWKQQVLKLLRTFPRKAAL 540
KVCTQLLVSRPDEENITSYLQLIEKCLTHEAFTETQKKRLLSWKQQVLKLLRTFPRKAAL
Sbjct: 481 KVCTQLLVSRPDEENITSYLQLIEKCLTHEAFTETQKKRLLSWKQQVLKLLRTFPRKAAL 540
Query: 541 EMQNYRQQKGWAFGSNSLPIAGSVGMGVARRTQRQFPMPPRALPPGRMGLLSPSGIGGVS 600
EMQNYRQQKGWAFGSNSLPIAGSVGMGVARRTQRQFPMPPRALPPGRMGLLSPSGIGGVS
Sbjct: 541 EMQNYRQQKGWAFGSNSLPIAGSVGMGVARRTQRQFPMPPRALPPGRMGLLSPSGIGGVS 600
Query: 601 PRHALTSPSLGGQGRQNLWFANPGGSNSMPSQSRSSVQRTHSLPVHSSPQAILMFPPDCP 660
PRHALTSPSLGGQGRQNLWFANPGGSNSMPSQSRSSVQRTHSLPVHSSPQAILMFPPDCP
Sbjct: 601 PRHALTSPSLGGQGRQNLWFANPGGSNSMPSQSRSSVQRTHSLPVHSSPQAILMFPPDCP 660
Query: 661 VPGPDLEINPTLESLCLSMTEHALGDGTDKTSTI 694
VPGPDLEINPTLESLCLSMTEHALGDGTDKTSTI
Sbjct: 661 VPGPDLEINPTLESLCLSMTEHALGDGTDKTSTI 694
>gi|239582747 sterile alpha motif domain containing 4 isoform 1
[Homo sapiens]
Length = 717
Score = 825 bits (2132), Expect = 0.0
Identities = 448/730 (61%), Positives = 535/730 (73%), Gaps = 50/730 (6%)
Query: 2 MFRDQVGILAGWFKGWNECEQTVALLSLLKRVTRTQARFLQLCLEHSLADCNDIHLLESE 61
MFRDQVG+LAGWFKGWNECEQTVALLSLLKRV++TQARFLQLCLEHSLADC ++H+LE E
Sbjct: 1 MFRDQVGVLAGWFKGWNECEQTVALLSLLKRVSQTQARFLQLCLEHSLADCAELHVLERE 60
Query: 62 ANSAAIVSQWQQESKEKVVSLLLSHLPLLQPGNTEAKSEYMRLLQKVLAYSIESNAFIEE 121
ANS I++QWQQESK+KV+SLLL+HLPLL+PGN +AK EYM+LL K+LA+SIE N IEE
Sbjct: 61 ANSPGIINQWQQESKDKVISLLLTHLPLLKPGNLDAKVEYMKLLPKILAHSIEHNQHIEE 120
Query: 122 SRQLLSYALIHPATTLEDRNALALWLSHLEERLASGF----RSRPEP-------SYHSRQ 170
SRQLLSYALIHPAT+LEDR+ALA+WL+HLE+R ++ F R R + YH RQ
Sbjct: 121 SRQLLSYALIHPATSLEDRSALAMWLNHLEDRTSTSFGGQNRGRSDSVDYGQTHYYHQRQ 180
Query: 171 GSDE----WGGPAELGPGEAGPGWQDKPPR-ENGHVPFHPSSSVPPAINSIGSNANTGLP 225
SD+ W + G WQDK ENGHVP + SSSVP IN+IG++ +T L
Sbjct: 181 NSDDKLNGWQNSRDSGICINASNWQDKSMGCENGHVPLYSSSSVPTTINTIGTSTSTILS 240
Query: 226 CQIHPSPLKRSMSLIPTSPQVPGE-----WPSPEELGARAAFTTP-DHAPLSPQSSVASS 279
Q H SPLKRS+SL P VP + W S E+L AR P DHAPLSPQSSVASS
Sbjct: 241 GQAHHSPLKRSVSLTPPM-NVPNQPLGHGWMSHEDLRARGPQCLPSDHAPLSPQSSVASS 299
Query: 280 ---GSEQTEEQGSSRNTFQEDGSGMKDVPSWLKSLRLHKYAALFSQMSYEEMMTLTEQHL 336
GSE E+Q ++RNTFQE+GSGMKDVP+WLKSLRLHKYAALFSQM+YEEMM LTE L
Sbjct: 300 GSGGSEHLEDQTTARNTFQEEGSGMKDVPAWLKSLRLHKYAALFSQMTYEEMMALTECQL 359
Query: 337 ESQNVTKGARHKIALSIQKLRERQSVLKSLEKDVLEGGNLRNALQELQQIIITPIKAYSV 396
E+QNVTKGARHKI +SIQKL+ERQ++LKSLE+D++EGG+LR LQEL Q+I+TPIKAYS
Sbjct: 360 EAQNVTKGARHKIVISIQKLKERQNLLKSLERDIIEGGSLRIPLQELHQMILTPIKAYS- 418
Query: 397 LQATVAAATTTPTAKDGAPGEPPLPGAEPPLAHPGTDKGTEAKDPPAVENYPPPPAPAPT 456
+ +TTP A+ P P P P + + KD A P+ +
Sbjct: 419 ------SPSTTPEARRREPQAPRQPSLMGP-----ESQSPDCKDGAAATGATATPSAGAS 467
Query: 457 DGSEP----------APAPVADGDIPSQFTRVMGKVCTQLLVSRPDEENITSYLQLIEKC 506
G +P A AP+ +GD+P QFTRVMGKVCTQLLVSRPDEENI+SYLQLI+KC
Sbjct: 468 GGLQPHQLSSCDGELAVAPLPEGDLPGQFTRVMGKVCTQLLVSRPDEENISSYLQLIDKC 527
Query: 507 LTHEAFTETQKKRLLSWKQQVLKLLRTFPRKAALEMQNYRQQKGWAFG-SNSLPIAGSVG 565
L HEAFTETQKKRLLSWKQQV KL R+FPRK L++ YRQQ+ FG SNSLP AGSVG
Sbjct: 528 LIHEAFTETQKKRLLSWKQQVQKLFRSFPRKTLLDISGYRQQRNRGFGQSNSLPTAGSVG 587
Query: 566 MGVARRTQRQFPMPPRALPPGRMGLLSPSGIGGVSPRHALTSPSLGGQGRQNLWFANPGG 625
G+ RR RQ+ +P R +P R+GLL SG + R+ +P++ QGRQNLWFANPGG
Sbjct: 588 GGMGRRNPRQYQIPSRNVPSARLGLLGTSGFVSSNQRNTTATPTIMKQGRQNLWFANPGG 647
Query: 626 SNSMPSQSRSSVQRTHSLPVHSSPQAILMF-PPDCPVPGPDLEINPTLESLCLSMTEHAL 684
SNSMPS++ SSVQRT SLPVH+SPQ +LMF P+ +P + +IN LESLCLSMTEHAL
Sbjct: 648 SNSMPSRTHSSVQRTRSLPVHTSPQNMLMFQQPEFQLPVTEPDINNRLESLCLSMTEHAL 707
Query: 685 GDGTDKTSTI 694
GDG D+TSTI
Sbjct: 708 GDGVDRTSTI 717
>gi|239582749 sterile alpha motif domain containing 4 isoform 2
[Homo sapiens]
Length = 629
Score = 617 bits (1592), Expect = e-177
Identities = 359/709 (50%), Positives = 443/709 (62%), Gaps = 96/709 (13%)
Query: 2 MFRDQVGILAGWFKGWNECEQTVALLSLLKRVTRTQARFLQLCLEHSLADCNDIHLLESE 61
MFRDQVG+LAGWFKGWNECEQTVALLSLLKRV++TQARFLQLCLEHSLADC ++H+LE E
Sbjct: 1 MFRDQVGVLAGWFKGWNECEQTVALLSLLKRVSQTQARFLQLCLEHSLADCAELHVLERE 60
Query: 62 ANSAAIVSQWQQESKEKVVSLLLSHLPLLQPGNTEAKSEYMRLLQKVLAYSIESNAFIEE 121
ANS I++QWQQESK+KV+SLLL+HLPLL+PGN +AK EYM+LL K+L
Sbjct: 61 ANSPGIINQWQQESKDKVISLLLTHLPLLKPGNLDAKVEYMKLLPKIL------------ 108
Query: 122 SRQLLSYALIHPATTLEDRNALALWLSHLEERLASGFRSRPEPSYHSRQGSDEWGGPAE- 180
++++ H E R L+ L H P S R W E
Sbjct: 109 -----AHSIEHNQHIEESRQLLSYALIH------------PATSLEDRSALAMWLNHLED 151
Query: 181 ---LGPGEAGPGWQDKPPRENGHVPFHPSSSVPPAINSIGSNANTGLPCQIHPSPLKRSM 237
G G D H +H + +N ++ ++G+
Sbjct: 152 RTSTSFGGQNRGRSDSVDYGQTHY-YHQRQNSDDKLNGWQNSRDSGICINA--------- 201
Query: 238 SLIPTSPQVPGEWPSPEELGARAAFTTPDHAPLSPQSSVASSGSEQTEEQGSSRNTFQED 297
W + +G H PL SSV ++ G+S +T
Sbjct: 202 ----------SNWQD-KSMGCENG-----HVPLYSSSSVPTT----INTIGTSTST---- 237
Query: 298 GSGMKDVPSWLKSLRLHKYAALFSQMSYEEMMTLTEQHLESQNVTKGARHKIALSIQKLR 357
+VP+WLKSLRLHKYAALFSQM+YEEMM LTE LE+QNVTKGARHKI +SIQKL+
Sbjct: 238 -----NVPAWLKSLRLHKYAALFSQMTYEEMMALTECQLEAQNVTKGARHKIVISIQKLK 292
Query: 358 ERQSVLKSLEKDVLEGGNLRNALQELQQIIITPIKAYSVLQATVAAATTTPTAKDGAPGE 417
ERQ++LKSLE+D++EGG+LR LQEL Q+I+TPIKAYS + +TTP A+ P
Sbjct: 293 ERQNLLKSLERDIIEGGSLRIPLQELHQMILTPIKAYS-------SPSTTPEARRREPQA 345
Query: 418 PPLPGAEPPLAHPGTDKGTEAKDPPAVENYPPPPAPAPTDGSEP----------APAPVA 467
P P P + + KD A P+ + G +P A AP+
Sbjct: 346 PRQPSLMGP-----ESQSPDCKDGAAATGATATPSAGASGGLQPHQLSSCDGELAVAPLP 400
Query: 468 DGDIPSQFTRVMGKVCTQLLVSRPDEENITSYLQLIEKCLTHEAFTETQKKRLLSWKQQV 527
+GD+P QFTRVMGKVCTQLLVSRPDEENI+SYLQLI+KCL HEAFTETQKKRLLSWKQQV
Sbjct: 401 EGDLPGQFTRVMGKVCTQLLVSRPDEENISSYLQLIDKCLIHEAFTETQKKRLLSWKQQV 460
Query: 528 LKLLRTFPRKAALEMQNYRQQKGWAFG-SNSLPIAGSVGMGVARRTQRQFPMPPRALPPG 586
KL R+FPRK L++ YRQQ+ FG SNSLP AGSVG G+ RR RQ+ +P R +P
Sbjct: 461 QKLFRSFPRKTLLDISGYRQQRNRGFGQSNSLPTAGSVGGGMGRRNPRQYQIPSRNVPSA 520
Query: 587 RMGLLSPSGIGGVSPRHALTSPSLGGQGRQNLWFANPGGSNSMPSQSRSSVQRTHSLPVH 646
R+GLL SG + R+ +P++ QGRQNLWFANPGGSNSMPS++ SSVQRT SLPVH
Sbjct: 521 RLGLLGTSGFVSSNQRNTTATPTIMKQGRQNLWFANPGGSNSMPSRTHSSVQRTRSLPVH 580
Query: 647 SSPQAILMF-PPDCPVPGPDLEINPTLESLCLSMTEHALGDGTDKTSTI 694
+SPQ +LMF P+ +P + +IN LESLCLSMTEHALGDG D+TSTI
Sbjct: 581 TSPQNMLMFQQPEFQLPVTEPDINNRLESLCLSMTEHALGDGVDRTSTI 629
>gi|239582751 sterile alpha motif domain containing 4 isoform 3
[Homo sapiens]
Length = 345
Score = 315 bits (807), Expect = 9e-86
Identities = 181/357 (50%), Positives = 218/357 (61%), Gaps = 60/357 (16%)
Query: 386 IIITPIKAYSVLQATVAAATTTPTAKDGAPGEPPLPGAEPPLAHPGTDKGTEAKDPPAVE 445
+I+TPIKAYS + +TTP A+ P P P P + + KD A
Sbjct: 1 MILTPIKAYS-------SPSTTPEARRREPQAPRQPSLMGP-----ESQSPDCKDGAAAT 48
Query: 446 NYPPPPAPAPTDGSEP----------APAPVADGDIPSQFTRVMGKVCTQLLVSRPDEEN 495
P+ + G +P A AP+ +GD+P QFTRVMGKVCTQLLVSRPDEEN
Sbjct: 49 GATATPSAGASGGLQPHQLSSCDGELAVAPLPEGDLPGQFTRVMGKVCTQLLVSRPDEEN 108
Query: 496 ITSYLQLIEKCLTHEAFTETQKKRLLSWKQQVLKLLRTFPRKAALEMQNYRQQKGWAFG- 554
I+SYLQLI+KCL HEAFTETQKKRLLSWKQQV KL R+FPRK L++ YRQQ+ FG
Sbjct: 109 ISSYLQLIDKCLIHEAFTETQKKRLLSWKQQVQKLFRSFPRKTLLDISGYRQQRNRGFGQ 168
Query: 555 SNSLPIAGSVGMGVARRTQRQFPMPPRALPPGRMGLLSPSGIGGVSPRHALTSPSLGGQG 614
SNSLP AGSVG G+ RR RQ+ +P R +P R+GLL SG + R+ +P++ QG
Sbjct: 169 SNSLPTAGSVGGGMGRRNPRQYQIPSRNVPSARLGLLGTSGFVSSNQRNTTATPTIMKQG 228
Query: 615 RQNLWFANPGGSNSMPSQSRSSVQRTHSLPVHSSPQAILMF------------------- 655
RQNLWFANPGGSNSMPS++ SSVQRT SLPVH+SPQ +LMF
Sbjct: 229 RQNLWFANPGGSNSMPSRTHSSVQRTRSLPVHTSPQNMLMFQQPGSQVHSGLCLTDLRGW 288
Query: 656 -----PPDCP-------------VPGPDLEINPTLESLCLSMTEHALGDGTDKTSTI 694
P P +P + +IN LESLCLSMTEHALGDG D+TSTI
Sbjct: 289 LSLSGAPSMPALTVPKSSQGEFQLPVTEPDINNRLESLCLSMTEHALGDGVDRTSTI 345
>gi|149158690 HLA-B associated transcript-2 [Homo sapiens]
Length = 2157
Score = 48.9 bits (115), Expect = 2e-05
Identities = 72/302 (23%), Positives = 114/302 (37%), Gaps = 28/302 (9%)
Query: 343 KGARHKIALSIQKLRERQSVLKSLEKDVLEGGNLRNALQELQQIIITPIKAYSVLQATVA 402
K + +I+L++++ R R+ + ++ L+ L + P K A
Sbjct: 454 KQSSSEISLAVERARRRREEEERRMQEERRAA-CAEKLKRLDEKFGAPDKRLKAEPAAPP 512
Query: 403 AATTTPTAKDGAPGEPPLPGAEPPLAHPGTDKGTEAKDPPAVENYPPPPAPAPTDGSEPA 462
AA +TP P E P P A PP + P + TE ++P PP PT G A
Sbjct: 513 AAPSTPAPPPAVPKELPAPPAPPPASAPTPE--TEPEEPAQA----PPAQSTPTPGVAAA 566
Query: 463 PAPVADGDIPS-------QFTRVMGKVCTQLLVSRPDE--ENITSYLQLIEKCLTHEAFT 513
P V+ G S + + V ++ ++ P+E T + +E T
Sbjct: 567 PTLVSGGGSTSSTSSGSFEASPVEPQLPSKEGPEPPEEVPPPTTPPVPKVEPKGDGIGPT 626
Query: 514 ETQKKRLLSWKQQVLKLLRTFPRKAALEMQNYRQQKGW----AFGSNSLPIAGS----VG 565
+ L + + L F R+ ++ +QQ W + P+ S V
Sbjct: 627 RQPPSQGLGYPKYQKSLPPRFQRQQQEQLLKQQQQHQWQQHQQGSAPPTPVPPSPPQPVT 686
Query: 566 MGVARRTQRQFPMPPRALPPGRMGLLSPSGIGGVSPRHALTSPSLGG---QGRQNLWFAN 622
+G Q P PP+AL PG +G P PR + P + QGR L F
Sbjct: 687 LGAVPAPQAP-PPPPKALYPGALGRPPPMPPMNFDPRWMMIPPYVDPRLLQGRPPLDFYP 745
Query: 623 PG 624
PG
Sbjct: 746 PG 747
Score = 31.6 bits (70), Expect = 2.6
Identities = 35/141 (24%), Positives = 50/141 (35%), Gaps = 34/141 (24%)
Query: 157 GFRSRPEPSYHSRQGSDEWGGPAELGPGEAGPGWQDKPPRENGHVPFHPSSS------VP 210
G RSR SY +G D GG G G + PP G S +P
Sbjct: 1048 GARSREFRSYREFRGDDGRGG---------GTGGPNHPPAPRGRTASETRSEGSEYEEIP 1098
Query: 211 PAINSIGSNANTGLPCQIH-----------PSPLKRSMSLIPTSPQVPGEWPSPEELGAR 259
GS + + H P+P + +++ +P +P PG PSP A
Sbjct: 1099 KRRRQRGSETGS----ETHESDLAPSDKEAPTPKEGTLTQVPLAPPPPGAPPSP----AP 1150
Query: 260 AAFTTPDHAPLSPQSSVASSG 280
A FT +P+ + G
Sbjct: 1151 ARFTARGGRVFTPRGVPSRRG 1171
Score = 30.0 bits (66), Expect = 7.5
Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 10/59 (16%)
Query: 412 DGAPGEPPLPGAEPPLAHPGTDKGTEAKDPPAVENYPPPPAPAPTD-------GSEPAP 463
+ P E P PG+EPP P + K+ P P PP P T+ G+EP P
Sbjct: 1694 NAVPCEGP-PGSEPPRRPPPAPHDGDRKELP--REQPLPPGPIGTERSQRTDRGTEPGP 1749
>gi|21735419 zinc finger, CCHC domain containing 14 [Homo sapiens]
Length = 949
Score = 48.1 bits (113), Expect = 3e-05
Identities = 45/151 (29%), Positives = 71/151 (47%), Gaps = 25/151 (16%)
Query: 230 PSPLKRSMSLIPTSPQVPGEWPSPEELGARAAFTTPDH---------APLSPQSSVASSG 280
PSP S+S + T V G P G ++ + H APL S S+G
Sbjct: 211 PSPGNPSLSKVGTVMGVSGR-PVCGVAGIPSSQSGAQHHGQHPAGSAAPLPHCSHAGSAG 269
Query: 281 SEQTEE----------QGSSRNTFQ-EDGSGMKDVPSWLKSLRLHKYAALFSQMSYEEMM 329
S SS T Q ++ +G+ D WL+ LRLHKY +F Q+S E+ +
Sbjct: 270 SALAYRTQMDTSPAILMPSSLQTPQTQEQNGILD---WLRKLRLHKYYPVFKQLSMEKFL 326
Query: 330 TLTEQHLES-QNVTKGARHKIALSIQKLRER 359
+LTE+ L +++T GA+ K+ ++ +E+
Sbjct: 327 SLTEEDLNKFESLTMGAKKKLKTQLELEKEK 357
>gi|33356148 formin-like 1 [Homo sapiens]
Length = 1100
Score = 45.4 bits (106), Expect = 2e-04
Identities = 47/175 (26%), Positives = 68/175 (38%), Gaps = 31/175 (17%)
Query: 315 KYAALFSQMSY--EEMMTLTEQHLESQNVTKGAR---------------HKIALSIQKLR 357
K A L Q+S +E+ TL E+ ES + R + L +++L
Sbjct: 425 KIAELEKQLSQARKELETLRERFSESTAMGASRRPPEPEKAPPAAPTRPSALELKVEELE 484
Query: 358 ERQSVLKSLEKDVLEGGNLRNALQELQQIIITPIKAYSVLQATVAAATTTPTAKDGAPGE 417
E+ + +L G +++ L + TP S A T + D AP
Sbjct: 485 EKGLIR------ILRGPGDAVSIEILPVAVATP----SGGDAPTPGVPTGSPSPDLAPAA 534
Query: 418 PPLPGAEPPLAHPGTDKGTEAKDPPAVENYPPPPAPAPTDGSEPAPAPVADGDIP 472
P PGA PP P + + PP+ PP AP EP PAP GD+P
Sbjct: 535 EPAPGAAPPPPPPLPGLPSPQEAPPSA----PPQAPPLPGSPEPPPAPPLPGDLP 585
Score = 41.6 bits (96), Expect = 0.003
Identities = 34/130 (26%), Positives = 49/130 (37%), Gaps = 11/130 (8%)
Query: 403 AATTTPTAKDGAPGEPPLPGAEPPLAHPGTDKGTEAKDPPAVENYPPPPAPAP----TDG 458
AA P G P P + PP A P PP + PPPP P P TDG
Sbjct: 540 AAPPPPPPLPGLPSPQEAPPSAPPQAPPLPGSPEPPPAPPLPGDLPPPPPPPPPPPGTDG 599
Query: 459 ---SEPAPAPVADGDIPSQFTRVMGKVCTQLLVSRPDEEN----ITSYLQLIEKCLTHEA 511
P P P G P R ++ + +P + + +++ L +T
Sbjct: 600 PVPPPPPPPPPPPGGPPDALGRRDSELGPGVKAKKPIQTKFRMPLLNWVALKPSQITGTV 659
Query: 512 FTETQKKRLL 521
FTE +++L
Sbjct: 660 FTELNDEKVL 669
>gi|24308073 protein tyrosine phosphatase, non-receptor type 23 [Homo
sapiens]
Length = 1636
Score = 44.7 bits (104), Expect = 3e-04
Identities = 72/299 (24%), Positives = 116/299 (38%), Gaps = 51/299 (17%)
Query: 195 PRENGHVPFHPSSSVP-PAINSIGSNANTGLPCQIHPSPLKRSMSLI--PTSPQVPGEWP 251
P E G H + S+ ++ S ++ L Q LKRS+ + PT P++ G
Sbjct: 1304 PTERGQPMVHGALSLALSSVRSTETHVERVLSLQFRDQSLKRSLVHLHFPTWPEL-GLPD 1362
Query: 252 SP-------EELGARAAFTTPDHAPLSPQSSVASSGSEQTEEQGSSRNTFQE--DGSGMK 302
SP +E+ A P H P+ SSG +T QE G+G+
Sbjct: 1363 SPSNLLRFIQEVHAHYLHQRPLHTPIIVH---CSSGVGRTGAFALLYAAVQEVEAGNGIP 1419
Query: 303 DVPSWLKSLRLHKYAALFSQMS----YEEMMTLTEQHLESQNVTKGARHKIALSIQKLRE 358
++P ++ +R + L ++ YE ++ EQ L+ V + + SI +
Sbjct: 1420 ELPQLVRRMRQQRKHMLQEKLHLRFCYEAVVRHVEQVLQRHGVPPPCKPLASASISQ--- 1476
Query: 359 RQSVLKSLEKDVLEGGNLRNALQELQQIIITPIKAYSVLQATVAAATTTPTAKDGAPG-- 416
++ L +D++ GG++ PI S +QAT+A + P PG
Sbjct: 1477 -KNHLPQDSQDLVLGGDV-------------PI---SSIQATIAKLSIRP------PGGL 1513
Query: 417 EPPLPGAEPPLAHPGTDKGTEAKDPPAVENYPPP---PAPAPTDGSEPAPAPVADGDIP 472
E P+ P PG + + P + PPP P P E P P A P
Sbjct: 1514 ESPVASLPGPAEPPGLPPASLPESTPIPSSSPPPLSSPLPEAPQPKEEPPVPEAPSSGP 1572
Score = 32.3 bits (72), Expect = 1.5
Identities = 27/76 (35%), Positives = 34/76 (44%), Gaps = 7/76 (9%)
Query: 417 EPPLPGAEPPLAHPGTDKGTEAKDP-PAVENYPPPPAPAPTDGSEPAPAPVADGDIPSQF 475
+P + G PP H G A+DP PA P P+P P +P P+A G PS
Sbjct: 1003 QPGVLGQPPPPLHTQLYPGP-AQDPLPAHSGALPFPSPGPP---QPPHPPLAYGPAPS-- 1056
Query: 476 TRVMGKVCTQLLVSRP 491
TR MG L + P
Sbjct: 1057 TRPMGPQAAPLTIRGP 1072
Score = 29.6 bits (65), Expect = 9.8
Identities = 25/89 (28%), Positives = 31/89 (34%), Gaps = 9/89 (10%)
Query: 408 PTAKDGAPGEPPL-PGAEPPLAHPGTDKGTEAKDPPAVENYPPPPAPAPTDGSEPAPAPV 466
P A AP P+ P A P + G P V + P P P P PA P
Sbjct: 1048 PLAYGPAPSTRPMGPQAAPLTIRGPSSAGQSTPSPHLVPSPAPSPGPGPVPPRPPAAEP- 1106
Query: 467 ADGDIPSQFTRVMGKVCTQLLVSRPDEEN 495
P R G LL S P+ ++
Sbjct: 1107 -----PPCLRR--GAAAADLLSSSPESQH 1128
>gi|153792074 proline rich 12 [Homo sapiens]
Length = 2036
Score = 44.7 bits (104), Expect = 3e-04
Identities = 42/135 (31%), Positives = 56/135 (41%), Gaps = 16/135 (11%)
Query: 337 ESQNVTKGARHKIALSIQKLRERQSVLKSLEKDVLEGGNLRNALQELQQIIITPIKAYSV 396
ES+ + G ++L+ L S D E +N ++LQ+ I + I A
Sbjct: 1351 ESEGLGLGCPSPCKRLDEELKRNLETLPSFSSDE-EDSVAKN--RDLQESISSAISALDD 1407
Query: 397 LQATVAAATTTPTAKDGAP-----GEPPLPGAEPPLAHPGTDKGTEAKDPPAVENYPPP- 450
T+TP AP G PPLPG P GT +PP +E PPP
Sbjct: 1408 PPLAGPKDTSTPDGPPLAPAAAVPGPPPLPGL-PSANSNGTP------EPPLLEEKPPPT 1460
Query: 451 PAPAPTDGSEPAPAP 465
P PAPT +P P P
Sbjct: 1461 PPPAPTPQPQPPPPP 1475
Score = 37.7 bits (86), Expect = 0.036
Identities = 25/64 (39%), Positives = 30/64 (46%), Gaps = 8/64 (12%)
Query: 407 TPTAKDGAPGEPPLPG--AEPPLAHPGTDKGTEAKDPPAVENYPPPPA-PAPTDGSEPAP 463
TP + P PP P + PPL P T + PP PPPPA P+P PA
Sbjct: 1466 TPQPQPPPPPPPPQPALPSPPPLVAP-----TPSSPPPPPLPPPPPPAMPSPPPPPPPAA 1520
Query: 464 APVA 467
AP+A
Sbjct: 1521 APLA 1524
Score = 35.4 bits (80), Expect = 0.18
Identities = 21/60 (35%), Positives = 23/60 (38%), Gaps = 4/60 (6%)
Query: 408 PTAKDGAPGEPPLPGAEPPLAHPGTDKGTEAKDPPAVENYP----PPPAPAPTDGSEPAP 463
P+A EPPL +PP P PP P PPP APT S P P
Sbjct: 1440 PSANSNGTPEPPLLEEKPPPTPPPAPTPQPQPPPPPPPPQPALPSPPPLVAPTPSSPPPP 1499
Score = 33.9 bits (76), Expect = 0.52
Identities = 21/64 (32%), Positives = 26/64 (40%), Gaps = 11/64 (17%)
Query: 408 PTAKDGAPGEPPL----PGAEPPLAHPGTDKGTEAKDPPAVENYPPPPAPAPTDGSEPAP 463
P + P PPL P + PP P PPA+ + PPPP PA + P
Sbjct: 1476 PPPQPALPSPPPLVAPTPSSPPPPPLP-------PPPPPAMPSPPPPPPPAAAPLAAPPE 1528
Query: 464 APVA 467
P A
Sbjct: 1529 EPAA 1532
Score = 32.3 bits (72), Expect = 1.5
Identities = 19/56 (33%), Positives = 24/56 (42%), Gaps = 5/56 (8%)
Query: 415 PGEPPLPGAEP-PLAHPGTDKGTEAKDPPAV----ENYPPPPAPAPTDGSEPAPAP 465
P PP P +P P P + PP V + PPPP P P + P+P P
Sbjct: 1459 PTPPPAPTPQPQPPPPPPPPQPALPSPPPLVAPTPSSPPPPPLPPPPPPAMPSPPP 1514
Score = 30.8 bits (68), Expect = 4.4
Identities = 26/87 (29%), Positives = 34/87 (39%), Gaps = 30/87 (34%)
Query: 408 PTAKDGAPGEPPLPGAEPP---------LAHPGTD--------KGTEAKDPP-------- 442
P +DGAP PP P PP L G + + E+ DPP
Sbjct: 826 PATRDGAPQPPPPPPPPPPPMPLQLEAHLRSHGLEPAAPSPRLRPEESLDPPGAMQELLG 885
Query: 443 AVENYPPPP-----APAPTDGSEPAPA 464
A+E PP P P ++G +PA A
Sbjct: 886 ALEPLPPAPGDTGVGPPNSEGKDPAGA 912
>gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens]
Length = 502
Score = 44.3 bits (103), Expect = 4e-04
Identities = 22/59 (37%), Positives = 27/59 (45%), Gaps = 5/59 (8%)
Query: 415 PGEPPLPGAEPPLAHPGTDKGTEAKDPPAVENYPPPPAPAPTDGSEPAPAPVADGDIPS 473
P PP G PL P G PP PPPP P P+ G+ PAP P+ +P+
Sbjct: 369 PPPPPATGRSGPLPPPPPGAGGPPMPPP-----PPPPPPPPSSGNGPAPPPLPPALVPA 422
>gi|194248095 epsin 1 isoform b [Homo sapiens]
Length = 576
Score = 43.9 bits (102), Expect = 5e-04
Identities = 35/150 (23%), Positives = 61/150 (40%), Gaps = 22/150 (14%)
Query: 333 EQHLESQNVTKGARHKIALSIQKLRERQSVLKSLEKDVLEGGNLRNALQELQQIIITPIK 392
E+H + + + +G ++ ++I++ + GG ++L +L + P
Sbjct: 222 EEHDKEERIRRGDDLRLQMAIEESKRET------------GGKEESSLMDLADVFTAPAP 269
Query: 393 AYSVLQ----ATVAAATTTPTAKDGAPGEPPLPGAEPPLAHPGTDKGT------EAKDPP 442
A + A +AAA T G PP+P A P P + A P
Sbjct: 270 APTTDPWGGPAPMAAAVPTAAPTSDPWGGPPVPPAADPWGGPAPTPASGDPWRPAAPAGP 329
Query: 443 AVENYPPPPAPAPTDGSEPAPAPVADGDIP 472
+V+ + PAPA +G P P +DG +P
Sbjct: 330 SVDPWGGTPAPAAGEGPTPDPWGSSDGGVP 359
>gi|52485606 formin-like 2 [Homo sapiens]
Length = 1092
Score = 43.5 bits (101), Expect = 7e-04
Identities = 36/146 (24%), Positives = 54/146 (36%), Gaps = 5/146 (3%)
Query: 323 MSYEEMMTLTEQHLESQNVTKGARHKIALSIQKLRERQSVLKSLEKDVLEGGNLRNALQE 382
M + + + + + N K+ ++ +RQS L+ ++ + G ++ +
Sbjct: 428 MQRNKELDVVREIYKDANTQVHTLRKMVKEKEEAIQRQSTLEKKIHELEKQGTIKIQKKG 487
Query: 383 LQQIIITPIKAYSVLQA---TVAAATTTPTAKDGAPGEPPLPGAEPPLAHPGTDKGTEAK 439
I I P+ A L VA + PT GA PLP PPL T
Sbjct: 488 DGDIAILPVVASGTLSMGSEVVAGNSVGPTM--GAASSGPLPPPPPPLPPSSDTPETVQN 545
Query: 440 DPPAVENYPPPPAPAPTDGSEPAPAP 465
P PPPP P P P P P
Sbjct: 546 GPVTPPMPPPPPPPPPPPPPPPPPPP 571
Score = 34.7 bits (78), Expect = 0.31
Identities = 19/63 (30%), Positives = 23/63 (36%), Gaps = 3/63 (4%)
Query: 404 ATTTPTAKDGAPGEPPLPGAEPPLAHPGTDKGTEAKDP---PAVENYPPPPAPAPTDGSE 460
++ TP P PP+P PP P P PA E P PP P +
Sbjct: 536 SSDTPETVQNGPVTPPMPPPPPPPPPPPPPPPPPPPPPLPGPAAETVPAPPLAPPLPSAP 595
Query: 461 PAP 463
P P
Sbjct: 596 PLP 598
Score = 30.8 bits (68), Expect = 4.4
Identities = 22/70 (31%), Positives = 26/70 (37%), Gaps = 1/70 (1%)
Query: 390 PIKAYSVLQATVAAATTTPTAKDGAPGEPPLPGAEPPLAHPGTDKGTEAKDPPAVENYPP 449
P+ S TV TP P PP P PP P G A+ PA PP
Sbjct: 532 PLPPSSDTPETVQNGPVTPPMPPPPPPPPPPPPPPPPPPPPPLP-GPAAETVPAPPLAPP 590
Query: 450 PPAPAPTDGS 459
P+ P G+
Sbjct: 591 LPSAPPLPGT 600
>gi|209977046 fibrous sheath CABYR binding protein [Homo sapiens]
Length = 825
Score = 42.7 bits (99), Expect = 0.001
Identities = 79/337 (23%), Positives = 117/337 (34%), Gaps = 58/337 (17%)
Query: 179 AELGPGEAGPGWQDKPPRENGHVPFHPSSSVPPAINSIGSNANTGLPCQIHPSPLKRSMS 238
AE+ P A ++PP E P S SV + I S + P ++ P P + ++
Sbjct: 348 AEILPPSAEESPSEEPPAEILPPPAEKSPSVE-LLGEIRSPSAQKAPIEVQPLPAEGALE 406
Query: 239 LIPTS--------------PQVPGEWPSPE--ELGARAAFTTP-DHAPLSPQSSVASSGS 281
P P +P E P E EL A TP + AP QS +
Sbjct: 407 EAPAKVEPPTVEETLADVQPLLPEEAPREEARELQLSTAMETPAEEAPTEFQSPLPK--- 463
Query: 282 EQTEEQGSSR-NTFQEDGSGMKDVPSWLKSLRLHKYAALFSQMSYEEMMTLTEQHLESQN 340
E T E+ S+ + P+ +S L + S EE + L +
Sbjct: 464 ETTAEEASAEIQLLAATEPPADETPAEARS-------PLSEETSAEEAHAEVQSPLAEET 516
Query: 341 VTKGARHKIAL-------SIQKLRERQSVLKS----------LEKDVLEGGNLRNALQEL 383
+ A +I L + + E QS L ++ +G ++ A EL
Sbjct: 517 TAEEASAEIQLLAAIEAPADETPAEAQSPLSEETSAEEAPAEVQSPSAKGVSIEEAPLEL 576
Query: 384 QQ------IIITPIKAYSVLQATVAAATTTPTAKDGAPGEPPLPGAEPPLAHPGTDKGTE 437
Q A +L AT A+A P P E +PP P + E
Sbjct: 577 QPPSGEETTAEEASAAIQLLAATEASAEEAPAEVQPPPAEEAPAEVQPP---PAEEAPAE 633
Query: 438 AKDPPAVE---NYPPPPAPAPTDGSEPAPAPVADGDI 471
+ PPA E PPPA +P PA A ++
Sbjct: 634 VQPPPAEEAPAEVQPPPAEEAPAEVQPPPAEEAPAEV 670
>gi|157817073 Cdc2-related kinase, arginine/serine-rich isoform 2
[Homo sapiens]
Length = 1481
Score = 42.4 bits (98), Expect = 0.001
Identities = 75/325 (23%), Positives = 120/325 (36%), Gaps = 51/325 (15%)
Query: 160 SRPEPSYHSRQGSDEWGGPAELGPGEAGPGWQDKPPRENGHVPFHPSS---SVPPAINSI 216
SR S + R GS P+ G + + K +P S S PA +
Sbjct: 306 SRRRSSSYERSGSYSGRSPSPYGRRRSSSPFLSKRSLSRSPLPSRKSMKSRSRSPAYSRH 365
Query: 217 GSNANTGLPCQIHPSPLKRSMSLIPTSPQVPGEWPSPEELGARAAFTTPDHAPLSPQSSV 276
S+ S KRS S S P P LGA + + A ++
Sbjct: 366 SSSH----------SKKKRSSSRSRHSSISPVRLPLNSSLGAELSRKKKERA-----AAA 410
Query: 277 ASSGSEQTEEQGSSRNTFQEDGSGMKDVPSWLKSLRLHKYAALFSQMSYEEMMTLTEQHL 336
A++ + E +GS +++ S ++ S L+S +L + L E++ +T +
Sbjct: 411 AAAKMDGKESKGSPVFLPRKENSSVEAKDSGLESKKLPRSVKLEKSAPDTELVNVTHLNT 470
Query: 337 ESQNVTKGARHKIALSIQKLRERQSVLKSLEKDVLEGGNLRNALQELQQIIITPIKAYSV 396
E +N + + K+ + +K L KD+ G + L++ I+TP +
Sbjct: 471 EVKNSSDTGKVKLDENSEK---------HLVKDLKAQGTRDSKPIALKEEIVTPKE---- 517
Query: 397 LQATVAAATTTPTAKDGAPGEPPLPG-AEPPLAHPGTDKGTEAKDPPAVENYPP-PPAPA 454
T T++ P PPLP A PP P T PP PP PP PA
Sbjct: 518 ----------TETSEKETP--PPLPTIASPPPPLPTTTP------PPQTPPLPPLPPIPA 559
Query: 455 PTDGSEPAPAPVADGDIPSQFTRVM 479
P+ A +P+ T +
Sbjct: 560 LPQQPPLPPSQPAFSQVPASSTSTL 584
Score = 32.0 bits (71), Expect = 2.0
Identities = 39/195 (20%), Positives = 73/195 (37%), Gaps = 27/195 (13%)
Query: 304 VPSWLKSLRLHKYAALFSQMSY--EEMMTLTEQHLESQNVTKGARHKIALSIQKLRERQS 361
+P + L +H + Q+ + + LTE + Q+ A + S+++
Sbjct: 1131 IPQMAQLLNIHSNPEMQQQLEALNQSISALTEATSQQQDSETMAPEE---SLKEAPSAPV 1187
Query: 362 VLKSLEKDVLEGGNLRNALQELQQIIITPIKAYSVLQATVAAATTTPTAKDGAPGEPPLP 421
+L S E+ LE + +Q + ++++ + Q + + K+ P P
Sbjct: 1188 ILPSAEQTTLEASSTPADMQNILAVLLSQLMK---TQEPAGSLEENNSDKNSGPQGPRRT 1244
Query: 422 GAEPPLAHPGTDKGTEAKDPPAVENYPPPPAPAPTDGSEPAPAPVADGDIPSQFTRVMGK 481
P + K PP PPP P P P+ +GD+ S +
Sbjct: 1245 PTMP-------QEEAAEKRPPEPPGPPPP----------PPPPPLVEGDLSSAPQELNPA 1287
Query: 482 VCTQL--LVSRPDEE 494
V L L+S+P+ E
Sbjct: 1288 VTAALLQLLSQPEAE 1302
>gi|157817023 Cdc2-related kinase, arginine/serine-rich isoform 1
[Homo sapiens]
Length = 1490
Score = 42.4 bits (98), Expect = 0.001
Identities = 75/325 (23%), Positives = 120/325 (36%), Gaps = 51/325 (15%)
Query: 160 SRPEPSYHSRQGSDEWGGPAELGPGEAGPGWQDKPPRENGHVPFHPSS---SVPPAINSI 216
SR S + R GS P+ G + + K +P S S PA +
Sbjct: 306 SRRRSSSYERSGSYSGRSPSPYGRRRSSSPFLSKRSLSRSPLPSRKSMKSRSRSPAYSRH 365
Query: 217 GSNANTGLPCQIHPSPLKRSMSLIPTSPQVPGEWPSPEELGARAAFTTPDHAPLSPQSSV 276
S+ S KRS S S P P LGA + + A ++
Sbjct: 366 SSSH----------SKKKRSSSRSRHSSISPVRLPLNSSLGAELSRKKKERA-----AAA 410
Query: 277 ASSGSEQTEEQGSSRNTFQEDGSGMKDVPSWLKSLRLHKYAALFSQMSYEEMMTLTEQHL 336
A++ + E +GS +++ S ++ S L+S +L + L E++ +T +
Sbjct: 411 AAAKMDGKESKGSPVFLPRKENSSVEAKDSGLESKKLPRSVKLEKSAPDTELVNVTHLNT 470
Query: 337 ESQNVTKGARHKIALSIQKLRERQSVLKSLEKDVLEGGNLRNALQELQQIIITPIKAYSV 396
E +N + + K+ + +K L KD+ G + L++ I+TP +
Sbjct: 471 EVKNSSDTGKVKLDENSEK---------HLVKDLKAQGTRDSKPIALKEEIVTPKE---- 517
Query: 397 LQATVAAATTTPTAKDGAPGEPPLPG-AEPPLAHPGTDKGTEAKDPPAVENYPP-PPAPA 454
T T++ P PPLP A PP P T PP PP PP PA
Sbjct: 518 ----------TETSEKETP--PPLPTIASPPPPLPTTTP------PPQTPPLPPLPPIPA 559
Query: 455 PTDGSEPAPAPVADGDIPSQFTRVM 479
P+ A +P+ T +
Sbjct: 560 LPQQPPLPPSQPAFSQVPASSTSTL 584
Score = 33.9 bits (76), Expect = 0.52
Identities = 40/195 (20%), Positives = 74/195 (37%), Gaps = 18/195 (9%)
Query: 304 VPSWLKSLRLHKYAALFSQMSY--EEMMTLTEQHLESQNVTKGARHKIALSIQKLRERQS 361
+P + L +H + Q+ + + LTE + Q+ A + S+++
Sbjct: 1131 IPQMAQLLNIHSNPEMQQQLEALNQSISALTEATSQQQDSETMAPEE---SLKEAPSAPV 1187
Query: 362 VLKSLEKDVLEGGNLRNALQELQQIIITPIKAYSVLQATVAAATTTPTAKDGAPGEPPLP 421
+L S E+ LE + +Q + ++++ + ++ + + P P
Sbjct: 1188 ILPSAEQTTLEASSTPADMQNILAVLLSQLMKTQEPAGSLEENNSDKNSGPQGPRRTPTM 1247
Query: 422 GAEPPLAHPGTDKGTEAKDPPAVENYPPPPAPAPTDGSEPAPAPVADGDIPSQFTRVMGK 481
E A P E K PP PPP P P P+ +GD+ S +
Sbjct: 1248 PQEEAAACPPHILPPE-KRPPEPPGPPPP----------PPPPPLVEGDLSSAPQELNPA 1296
Query: 482 VCTQL--LVSRPDEE 494
V L L+S+P+ E
Sbjct: 1297 VTAALLQLLSQPEAE 1311
>gi|6382071 diaphanous 2 isoform 12C [Homo sapiens]
Length = 1096
Score = 41.6 bits (96), Expect = 0.003
Identities = 41/154 (26%), Positives = 59/154 (38%), Gaps = 15/154 (9%)
Query: 325 YEEMMTLTEQHLESQNVTKGARHKIALSIQKLRERQSVLKSLEKDVLEGGNLRNALQELQ 384
Y + + + HL V K K+ S QK E K +++ + LQ+
Sbjct: 469 YRQRLDIDLTHLIDSCVNKA---KVEESEQKAAEFS---KKFDEEFTARQEAQAELQKRD 522
Query: 385 QIIITPIKAYSVLQATVAAATTTPTAKDGAPGEPPLPGAEPPLAHPGTDKGTEAKDPP-- 442
+ I ++A T A ++ + G P PPLPG PP P A PP
Sbjct: 523 EKI-KELEAEIQQLRTQAQVLSSSSGIPGPPAAPPLPGVGPPPPPPAPPLPGGAPLPPPP 581
Query: 443 ----AVENYPPPPAPAPTDGSEPAPAPVADGDIP 472
+ PPPP P G P P P+ G +P
Sbjct: 582 PPLPGMMGIPPPPPPPLLFGGPPPPPPL--GGVP 613
>gi|5803003 diaphanous 2 isoform 156 [Homo sapiens]
Length = 1101
Score = 41.6 bits (96), Expect = 0.003
Identities = 41/154 (26%), Positives = 59/154 (38%), Gaps = 15/154 (9%)
Query: 325 YEEMMTLTEQHLESQNVTKGARHKIALSIQKLRERQSVLKSLEKDVLEGGNLRNALQELQ 384
Y + + + HL V K K+ S QK E K +++ + LQ+
Sbjct: 469 YRQRLDIDLTHLIDSCVNKA---KVEESEQKAAEFS---KKFDEEFTARQEAQAELQKRD 522
Query: 385 QIIITPIKAYSVLQATVAAATTTPTAKDGAPGEPPLPGAEPPLAHPGTDKGTEAKDPP-- 442
+ I ++A T A ++ + G P PPLPG PP P A PP
Sbjct: 523 EKI-KELEAEIQQLRTQAQVLSSSSGIPGPPAAPPLPGVGPPPPPPAPPLPGGAPLPPPP 581
Query: 443 ----AVENYPPPPAPAPTDGSEPAPAPVADGDIP 472
+ PPPP P G P P P+ G +P
Sbjct: 582 PPLPGMMGIPPPPPPPLLFGGPPPPPPL--GGVP 613
>gi|41350201 epsin 1 isoform c [Homo sapiens]
Length = 550
Score = 41.6 bits (96), Expect = 0.003
Identities = 31/110 (28%), Positives = 45/110 (40%), Gaps = 10/110 (9%)
Query: 373 GGNLRNALQELQQIIITPIKAYSVLQ----ATVAAATTTPTAKDGAPGEPPLPGAEPPLA 428
GG ++L +L + P A + A +AAA T G PP+P A P
Sbjct: 225 GGKEESSLMDLADVFTAPAPAPTTDPWGGPAPMAAAVPTAAPTSDPWGGPPVPPAADPWG 284
Query: 429 HPGTDKGT------EAKDPPAVENYPPPPAPAPTDGSEPAPAPVADGDIP 472
P + A P+V+ + PAPA +G P P +DG +P
Sbjct: 285 GPAPTPASGDPWRPAAPAGPSVDPWGGTPAPAAGEGPTPDPWGSSDGGVP 334
>gi|194272148 epsin 1 isoform a [Homo sapiens]
Length = 662
Score = 41.6 bits (96), Expect = 0.003
Identities = 31/110 (28%), Positives = 45/110 (40%), Gaps = 10/110 (9%)
Query: 373 GGNLRNALQELQQIIITPIKAYSVLQ----ATVAAATTTPTAKDGAPGEPPLPGAEPPLA 428
GG ++L +L + P A + A +AAA T G PP+P A P
Sbjct: 336 GGKEESSLMDLADVFTAPAPAPTTDPWGGPAPMAAAVPTAAPTSDPWGGPPVPPAADPWG 395
Query: 429 HPGTDKGT------EAKDPPAVENYPPPPAPAPTDGSEPAPAPVADGDIP 472
P + A P+V+ + PAPA +G P P +DG +P
Sbjct: 396 GPAPTPASGDPWRPAAPAGPSVDPWGGTPAPAAGEGPTPDPWGSSDGGVP 445
>gi|112421108 capicua homolog [Homo sapiens]
Length = 1608
Score = 41.2 bits (95), Expect = 0.003
Identities = 70/314 (22%), Positives = 105/314 (33%), Gaps = 53/314 (16%)
Query: 199 GHVPFHPSSSVPPAINSIGSN-----------------ANTGLPCQIHPSPLKRSMSLIP 241
G P PS + PA+ GS+ A TG ++ P PLK++ +
Sbjct: 1287 GEPPTPPSPAPAPAVAPGGSSESSSGRAAGDTPERKEAAGTGKKVKVRPPPLKKTFDSVD 1346
Query: 242 TSPQVPGEWPSPEELGARAAFTTPDHAPLSPQSSVASSGSEQTEEQGSSRNTFQEDGSGM 301
+V E E F + P S+A+S R + S
Sbjct: 1347 N--RVLSEVDFEERFAELPEFRPEEVLPSPTLQSLATSPRAILGSYRKKRKNSTDLDSAP 1404
Query: 302 KDVPSWLKSLRLHKYAALF-----SQMSYEEMMTLTEQHLESQNVTKGARH-KIALSIQK 355
+D S + +R + S ++ T E+++V + K+ S +
Sbjct: 1405 EDPTSPKRKMRRRSSCSSEPNTPKSAKCEGDIFTFDRTGTEAEDVLGELEYDKVPYSSLR 1464
Query: 356 --LRERQSVLKSLEKD--VLEGGNLRNALQE-----LQQIIITPIKAYSVLQATVAAATT 406
L +R++++ L +D A Q + +K V Q + AAT
Sbjct: 1465 RTLDQRRALVMQLFQDHGFFPSAQATAAFQARYADIFPSKVCLQLKIREVRQKIMQAATP 1524
Query: 407 T--------------PTAKDGAPGEPPLPGAEPPLAHPGTDKGTEAKDPPAVENYPPPPA 452
T PT AP P P P P +D GT PP PPPP
Sbjct: 1525 TEQPPGAEAPLPVPPPTGTAAAPAPTPSPAGGPDPTSPSSDSGTAQAAPP----LPPPPE 1580
Query: 453 PAP-TDGSEPAPAP 465
P G E AP P
Sbjct: 1581 SGPGQPGWEGAPQP 1594
Score = 30.8 bits (68), Expect = 4.4
Identities = 27/89 (30%), Positives = 34/89 (38%), Gaps = 24/89 (26%)
Query: 405 TTTPTAKDGAPGEPP----------------LPGAEPPLAHPGTDKGTEAKDPPAVENYP 448
T TPTA+ P PP P + PG +G E + P P
Sbjct: 1238 TWTPTARSSPPLPPPAEERTSAKGPETMASKFPSSSSDWRVPG--QGLENRGEPPT---P 1292
Query: 449 PPPAPAPT---DGSEPAPAPVADGDIPSQ 474
P PAPAP GS + + A GD P +
Sbjct: 1293 PSPAPAPAVAPGGSSESSSGRAAGDTPER 1321
>gi|24497513 homeobox A3 isoform a [Homo sapiens]
Length = 443
Score = 40.8 bits (94), Expect = 0.004
Identities = 73/296 (24%), Positives = 113/296 (38%), Gaps = 57/296 (19%)
Query: 392 KAYSVLQA---TVAAATTTPTAKDGAPGEPPLPGAEPPLAHPGTDKGTEAKDPPAVENYP 448
KA+ + +A T++A + P + P PP P A PP P A PPA
Sbjct: 63 KAHELSEACLRTLSAPPSQPPSLGEPPLHPPPPQAAPPAPQP----PQPAPQPPAPTPAA 118
Query: 449 PPP----APAPTDGSEPAPAPVADGDIPSQFTRVMGKVCTQLLVSRPDEENITSYLQLIE 504
PPP +P + P PA A + + T V ++ + SR + + TS E
Sbjct: 119 PPPPSSASPPQNASNNPTPANAAKSPLLNSPT-VAKQIFPWMKESRQNTKQKTSSSSSGE 177
Query: 505 KCLTHEA---FTETQKKRLLSWKQQVLKLLRTFP------RKAALEMQNY-----RQQKG 550
C ++ +++ R Q+++L + F R +EM N RQ K
Sbjct: 178 SCAGDKSPPGQASSKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKI 237
Query: 551 WAFGSNSLPIAGSVGMGVARRTQRQFPMPPRALPPGRMGLLSPSGIGGVSPRHALTSPSL 610
W F + + ++ Q+ G+L+ S GG SP + P
Sbjct: 238 W-FQNRRMKY---------KKDQK------------GKGMLTSS--GGQSPSRSPVPPGA 273
Query: 611 GG--QGRQNLWFANPGGSNSMPSQSRSSVQRTHSLPVHSSPQAILMFPPDCPVPGP 664
GG +L + P S P S+ Q T+ LP S P ++ P C P P
Sbjct: 274 GGYLNSMHSLVNSVPYEPQSPPPFSKPP-QGTYGLPPASYPASL----PSCAPPPP 324
>gi|13562112 homeobox A3 isoform a [Homo sapiens]
Length = 443
Score = 40.8 bits (94), Expect = 0.004
Identities = 73/296 (24%), Positives = 113/296 (38%), Gaps = 57/296 (19%)
Query: 392 KAYSVLQA---TVAAATTTPTAKDGAPGEPPLPGAEPPLAHPGTDKGTEAKDPPAVENYP 448
KA+ + +A T++A + P + P PP P A PP P A PPA
Sbjct: 63 KAHELSEACLRTLSAPPSQPPSLGEPPLHPPPPQAAPPAPQP----PQPAPQPPAPTPAA 118
Query: 449 PPP----APAPTDGSEPAPAPVADGDIPSQFTRVMGKVCTQLLVSRPDEENITSYLQLIE 504
PPP +P + P PA A + + T V ++ + SR + + TS E
Sbjct: 119 PPPPSSASPPQNASNNPTPANAAKSPLLNSPT-VAKQIFPWMKESRQNTKQKTSSSSSGE 177
Query: 505 KCLTHEA---FTETQKKRLLSWKQQVLKLLRTFP------RKAALEMQNY-----RQQKG 550
C ++ +++ R Q+++L + F R +EM N RQ K
Sbjct: 178 SCAGDKSPPGQASSKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKI 237
Query: 551 WAFGSNSLPIAGSVGMGVARRTQRQFPMPPRALPPGRMGLLSPSGIGGVSPRHALTSPSL 610
W F + + ++ Q+ G+L+ S GG SP + P
Sbjct: 238 W-FQNRRMKY---------KKDQK------------GKGMLTSS--GGQSPSRSPVPPGA 273
Query: 611 GG--QGRQNLWFANPGGSNSMPSQSRSSVQRTHSLPVHSSPQAILMFPPDCPVPGP 664
GG +L + P S P S+ Q T+ LP S P ++ P C P P
Sbjct: 274 GGYLNSMHSLVNSVPYEPQSPPPFSKPP-QGTYGLPPASYPASL----PSCAPPPP 324
>gi|56682953 epidermal growth factor receptor pathway substrate 8
[Homo sapiens]
Length = 822
Score = 40.8 bits (94), Expect = 0.004
Identities = 23/67 (34%), Positives = 28/67 (41%), Gaps = 4/67 (5%)
Query: 415 PGEPPLPGAEPPLAHP----GTDKGTEAKDPPAVENYPPPPAPAPTDGSEPAPAPVADGD 470
P E L A+PP H + G D P + PP PAP P PAPV
Sbjct: 590 PPESGLGRADPPYTHTIQKQRMEYGPRPADTPPAPSPPPTPAPVPVPLPPSTPAPVPVSK 649
Query: 471 IPSQFTR 477
+P+ TR
Sbjct: 650 VPANITR 656
>gi|119395760 diaphanous 1 isoform 2 [Homo sapiens]
Length = 1263
Score = 40.4 bits (93), Expect = 0.006
Identities = 38/153 (24%), Positives = 56/153 (36%), Gaps = 20/153 (13%)
Query: 322 QMSYEEMMTLTEQHLESQNVTKGARHKIALSIQKLRERQSVLKSLEKDVLEGGNLRNALQ 381
Q+ ++M + EQ L+ K A H E+Q + + E L +
Sbjct: 490 QVEMKKMESDFEQKLQDLQGEKDALHS---------EKQQIATEKQDLEAEVSQLTGEVA 540
Query: 382 ELQQIIITPIKAYSVLQATVAAATTTPTAKDGAPGEPPLPGAEPPLAHPGTDKGTEAKDP 441
+L + + K + L A + ++ P PPLPG D GT P
Sbjct: 541 KLTKELEDAKKEMASLSAAAITVPPSVPSRAPVPPAPPLPG----------DSGTIIPPP 590
Query: 442 PAV-ENYPPPPAPAPTDGSEPAPAPVADGDIPS 473
PA ++ PPP P P P P V PS
Sbjct: 591 PAPGDSTTPPPPPPPPPPPPPLPGGVCISSPPS 623
Score = 38.1 bits (87), Expect = 0.028
Identities = 22/68 (32%), Positives = 28/68 (41%), Gaps = 2/68 (2%)
Query: 404 ATTTPTAKDGAPGEPPLPGAEPPLAHPGTDKGTEAKDPPAVENYP--PPPAPAPTDGSEP 461
+TT P P PPLPG + P GT PP + PPP P P P
Sbjct: 596 STTPPPPPPPPPPPPPLPGGVCISSPPSLPGGTAISPPPPLSGDATIPPPPPLPEGVGIP 655
Query: 462 APAPVADG 469
+P+ + G
Sbjct: 656 SPSSLPGG 663
Score = 37.0 bits (84), Expect = 0.062
Identities = 27/81 (33%), Positives = 32/81 (39%), Gaps = 10/81 (12%)
Query: 397 LQATVAAATTTPTAKDGA-PGEPPLP---GAEPPLAHPGTDKGTEAKDPPAVEN---YPP 449
L A + P + D P PPLP G P + PG GT PP + PP
Sbjct: 624 LPGGTAISPPPPLSGDATIPPPPPLPEGVGIPSPSSLPG---GTAIPPPPPLPGSARIPP 680
Query: 450 PPAPAPTDGSEPAPAPVADGD 470
PP P P P P P G+
Sbjct: 681 PPPPLPGSAGIPPPPPPLPGE 701
Score = 35.4 bits (80), Expect = 0.18
Identities = 21/61 (34%), Positives = 24/61 (39%), Gaps = 4/61 (6%)
Query: 413 GAPGEPPLPGAE---PPLAHPGTDKGTEAKDP-PAVENYPPPPAPAPTDGSEPAPAPVAD 468
G P LPG PP PG+ + P P PPPP P P + P P P
Sbjct: 653 GIPSPSSLPGGTAIPPPPPLPGSARIPPPPPPLPGSAGIPPPPPPLPGEAGMPPPPPPLP 712
Query: 469 G 469
G
Sbjct: 713 G 713
Score = 35.4 bits (80), Expect = 0.18
Identities = 22/60 (36%), Positives = 24/60 (40%), Gaps = 5/60 (8%)
Query: 415 PGEPPLPGAE----PPLAHPGTDKGTEAKDP-PAVENYPPPPAPAPTDGSEPAPAPVADG 469
P PPLPG+ PP PG+ P P PPPP P P P P P G
Sbjct: 667 PPPPPLPGSARIPPPPPPLPGSAGIPPPPPPLPGEAGMPPPPPPLPGGPGIPPPPPFPGG 726
Score = 30.8 bits (68), Expect = 4.4
Identities = 18/53 (33%), Positives = 21/53 (39%), Gaps = 2/53 (3%)
Query: 415 PGEPPLPGAE--PPLAHPGTDKGTEAKDPPAVENYPPPPAPAPTDGSEPAPAP 465
P PPLPG+ PP P + PP + P P P P G P P
Sbjct: 680 PPPPPLPGSAGIPPPPPPLPGEAGMPPPPPPLPGGPGIPPPPPFPGGPGIPPP 732
Score = 30.4 bits (67), Expect = 5.8
Identities = 34/139 (24%), Positives = 51/139 (36%), Gaps = 21/139 (15%)
Query: 415 PGEPPLPGAE---PPLAHPGTDKGTEAKDPPAVENYPPPPAPAPTDGSEPAPAPVADGDI 471
P PPLPG PP PG G PP PPPP P PA + G
Sbjct: 706 PPPPPLPGGPGIPPPPPFPG---GPGIPPPPPGMGMPPPP---PFGFGVPAAPVLPFGLT 759
Query: 472 PSQFTRVMGKVCTQLLVSRPDEENITSYLQLIEKCLTHEAFTETQKKRLLSWKQQVLKLL 531
P + + ++ + RP ++ +L+ + L+ + F K+ + KL
Sbjct: 760 PKKLYK------PEVQLRRP------NWSKLVAEDLSQDCFWTKVKEDRFENNELFAKLT 807
Query: 532 RTFPRKAALEMQNYRQQKG 550
TF + Q+ G
Sbjct: 808 LTFSAQTKTSKAKKDQEGG 826
>gi|119395758 diaphanous 1 isoform 1 [Homo sapiens]
Length = 1272
Score = 40.4 bits (93), Expect = 0.006
Identities = 38/153 (24%), Positives = 56/153 (36%), Gaps = 20/153 (13%)
Query: 322 QMSYEEMMTLTEQHLESQNVTKGARHKIALSIQKLRERQSVLKSLEKDVLEGGNLRNALQ 381
Q+ ++M + EQ L+ K A H E+Q + + E L +
Sbjct: 499 QVEMKKMESDFEQKLQDLQGEKDALHS---------EKQQIATEKQDLEAEVSQLTGEVA 549
Query: 382 ELQQIIITPIKAYSVLQATVAAATTTPTAKDGAPGEPPLPGAEPPLAHPGTDKGTEAKDP 441
+L + + K + L A + ++ P PPLPG D GT P
Sbjct: 550 KLTKELEDAKKEMASLSAAAITVPPSVPSRAPVPPAPPLPG----------DSGTIIPPP 599
Query: 442 PAV-ENYPPPPAPAPTDGSEPAPAPVADGDIPS 473
PA ++ PPP P P P P V PS
Sbjct: 600 PAPGDSTTPPPPPPPPPPPPPLPGGVCISSPPS 632
Score = 38.1 bits (87), Expect = 0.028
Identities = 22/68 (32%), Positives = 28/68 (41%), Gaps = 2/68 (2%)
Query: 404 ATTTPTAKDGAPGEPPLPGAEPPLAHPGTDKGTEAKDPPAVENYP--PPPAPAPTDGSEP 461
+TT P P PPLPG + P GT PP + PPP P P P
Sbjct: 605 STTPPPPPPPPPPPPPLPGGVCISSPPSLPGGTAISPPPPLSGDATIPPPPPLPEGVGIP 664
Query: 462 APAPVADG 469
+P+ + G
Sbjct: 665 SPSSLPGG 672
Score = 37.0 bits (84), Expect = 0.062
Identities = 27/81 (33%), Positives = 32/81 (39%), Gaps = 10/81 (12%)
Query: 397 LQATVAAATTTPTAKDGA-PGEPPLP---GAEPPLAHPGTDKGTEAKDPPAVEN---YPP 449
L A + P + D P PPLP G P + PG GT PP + PP
Sbjct: 633 LPGGTAISPPPPLSGDATIPPPPPLPEGVGIPSPSSLPG---GTAIPPPPPLPGSARIPP 689
Query: 450 PPAPAPTDGSEPAPAPVADGD 470
PP P P P P P G+
Sbjct: 690 PPPPLPGSAGIPPPPPPLPGE 710
Score = 35.4 bits (80), Expect = 0.18
Identities = 21/61 (34%), Positives = 24/61 (39%), Gaps = 4/61 (6%)
Query: 413 GAPGEPPLPGAE---PPLAHPGTDKGTEAKDP-PAVENYPPPPAPAPTDGSEPAPAPVAD 468
G P LPG PP PG+ + P P PPPP P P + P P P
Sbjct: 662 GIPSPSSLPGGTAIPPPPPLPGSARIPPPPPPLPGSAGIPPPPPPLPGEAGMPPPPPPLP 721
Query: 469 G 469
G
Sbjct: 722 G 722
Score = 35.4 bits (80), Expect = 0.18
Identities = 22/60 (36%), Positives = 24/60 (40%), Gaps = 5/60 (8%)
Query: 415 PGEPPLPGAE----PPLAHPGTDKGTEAKDP-PAVENYPPPPAPAPTDGSEPAPAPVADG 469
P PPLPG+ PP PG+ P P PPPP P P P P P G
Sbjct: 676 PPPPPLPGSARIPPPPPPLPGSAGIPPPPPPLPGEAGMPPPPPPLPGGPGIPPPPPFPGG 735
Score = 30.8 bits (68), Expect = 4.4
Identities = 18/53 (33%), Positives = 21/53 (39%), Gaps = 2/53 (3%)
Query: 415 PGEPPLPGAE--PPLAHPGTDKGTEAKDPPAVENYPPPPAPAPTDGSEPAPAP 465
P PPLPG+ PP P + PP + P P P P G P P
Sbjct: 689 PPPPPLPGSAGIPPPPPPLPGEAGMPPPPPPLPGGPGIPPPPPFPGGPGIPPP 741
Score = 30.4 bits (67), Expect = 5.8
Identities = 34/139 (24%), Positives = 51/139 (36%), Gaps = 21/139 (15%)
Query: 415 PGEPPLPGAE---PPLAHPGTDKGTEAKDPPAVENYPPPPAPAPTDGSEPAPAPVADGDI 471
P PPLPG PP PG G PP PPPP P PA + G
Sbjct: 715 PPPPPLPGGPGIPPPPPFPG---GPGIPPPPPGMGMPPPP---PFGFGVPAAPVLPFGLT 768
Query: 472 PSQFTRVMGKVCTQLLVSRPDEENITSYLQLIEKCLTHEAFTETQKKRLLSWKQQVLKLL 531
P + + ++ + RP ++ +L+ + L+ + F K+ + KL
Sbjct: 769 PKKLYK------PEVQLRRP------NWSKLVAEDLSQDCFWTKVKEDRFENNELFAKLT 816
Query: 532 RTFPRKAALEMQNYRQQKG 550
TF + Q+ G
Sbjct: 817 LTFSAQTKTSKAKKDQEGG 835
>gi|148536848 carboxyl ester lipase precursor [Homo sapiens]
Length = 756
Score = 40.4 bits (93), Expect = 0.006
Identities = 30/97 (30%), Positives = 32/97 (32%), Gaps = 21/97 (21%)
Query: 403 AATTTPTAKDGAPGEPPLPGAEPPLAHPGTDKGTEAKDPPAVENYPP------------- 449
A PT GAP PP A PP P D G P PP
Sbjct: 659 APPVPPTGDSGAPPVPPTGDAGPPPVPPTGDSGAPPVPPTGDSGAPPVTPTGDSETAPVP 718
Query: 450 -------PPAPAPTDGSEPAPAPVADGDIPSQFTRVM 479
PP P PT SE AP P D +Q V+
Sbjct: 719 PTGDSGAPPVP-PTGDSEAAPVPPTDDSKEAQMPAVI 754
Score = 39.3 bits (90), Expect = 0.012
Identities = 24/70 (34%), Positives = 27/70 (38%), Gaps = 2/70 (2%)
Query: 403 AATTTPTAKDGAPGEPPLPGAEPPLAHPGTDKGTEAKDPPAVENYPPPPAPAPTDGSEPA 462
A PT GAP PP + P P D G PP + PPP P G+ P
Sbjct: 637 APPVPPTGDSGAPPVPPTGDSGAPPVPPTGDSGAPPV-PPTGDAGPPPVPPTGDSGAPPV 695
Query: 463 PAPVADGDIP 472
P P D P
Sbjct: 696 P-PTGDSGAP 704
Score = 38.5 bits (88), Expect = 0.021
Identities = 37/130 (28%), Positives = 47/130 (36%), Gaps = 10/130 (7%)
Query: 351 LSIQKLRERQSVLKSLEKDVLEGGNLRN-ALQELQQIIITPIKAYSVLQATVAAAT---- 405
L I K S+ +SL + L L AL + TP+ +AT T
Sbjct: 522 LEITKKMGSSSMKRSLRTNFLRYWTLTYLALPTVTDQEATPVPPTGDSEATPVPPTGDSE 581
Query: 406 ---TTPTAKDGAPGEPPLPGAEPPLAHPGTDKGTEAKDPPAVENYPPPPAPAPTDGSEPA 462
PT GAP PP + P P D G PP ++ PP P G+ P
Sbjct: 582 TAPVPPTGDSGAPPVPPTGDSGAPPVPPTGDSGAPPV-PPTGDSGAPPVPPTGDSGAPPV 640
Query: 463 PAPVADGDIP 472
P P D P
Sbjct: 641 P-PTGDSGAP 649
Score = 37.4 bits (85), Expect = 0.047
Identities = 23/70 (32%), Positives = 27/70 (38%), Gaps = 2/70 (2%)
Query: 403 AATTTPTAKDGAPGEPPLPGAEPPLAHPGTDKGTEAKDPPAVENYPPPPAPAPTDGSEPA 462
A PT GAP PP + P P D G PP ++ PP P G+ P
Sbjct: 593 APPVPPTGDSGAPPVPPTGDSGAPPVPPTGDSGAPPV-PPTGDSGAPPVPPTGDSGAPPV 651
Query: 463 PAPVADGDIP 472
P P D P
Sbjct: 652 P-PTGDSGAP 660
Score = 37.4 bits (85), Expect = 0.047
Identities = 23/70 (32%), Positives = 27/70 (38%), Gaps = 2/70 (2%)
Query: 403 AATTTPTAKDGAPGEPPLPGAEPPLAHPGTDKGTEAKDPPAVENYPPPPAPAPTDGSEPA 462
A PT GAP PP + P P D G PP ++ PP P G+ P
Sbjct: 604 APPVPPTGDSGAPPVPPTGDSGAPPVPPTGDSGAPPV-PPTGDSGAPPVPPTGDSGAPPV 662
Query: 463 PAPVADGDIP 472
P P D P
Sbjct: 663 P-PTGDSGAP 671
Score = 36.6 bits (83), Expect = 0.080
Identities = 23/70 (32%), Positives = 27/70 (38%), Gaps = 2/70 (2%)
Query: 403 AATTTPTAKDGAPGEPPLPGAEPPLAHPGTDKGTEAKDPPAVENYPPPPAPAPTDGSEPA 462
A PT GAP PP + P P D G PP ++ PP P G+ P
Sbjct: 615 APPVPPTGDSGAPPVPPTGDSGAPPVPPTGDSGAPPV-PPTGDSGAPPVPPTGDSGAPPV 673
Query: 463 PAPVADGDIP 472
P P D P
Sbjct: 674 P-PTGDAGPP 682
Score = 33.9 bits (76), Expect = 0.52
Identities = 24/72 (33%), Positives = 27/72 (37%), Gaps = 10/72 (13%)
Query: 403 AATTTPTAKDGAPGEPPLPGAEPPLAHPGTDKGTEAKDPPAVENYPPP---------PAP 453
A PT GAP PP + P P D G PP ++ PP P
Sbjct: 648 APPVPPTGDSGAPPVPPTGDSGAPPVPPTGDAGPPPV-PPTGDSGAPPVPPTGDSGAPPV 706
Query: 454 APTDGSEPAPAP 465
PT SE AP P
Sbjct: 707 TPTGDSETAPVP 718
>gi|29826321 adducin 1 (alpha) isoform b [Homo sapiens]
Length = 768
Score = 40.4 bits (93), Expect = 0.006
Identities = 31/90 (34%), Positives = 38/90 (42%), Gaps = 13/90 (14%)
Query: 389 TPIKAYSVLQATVAAATTTPTAKDGAPGEPPLPGAEPP-----LAHPGTDKGTEAKDPPA 443
TPIK L+ + TT D A +P LP P L P +K EA PP+
Sbjct: 645 TPIK----LEEDLVPEPTTGDDSDAATFKPTLPDLSPDEPSEALGFPMLEKEEEAHRPPS 700
Query: 444 VENYPPPPAPAPTDGSEPAPAPVADGDIPS 473
P +P P P PAPVA+ PS
Sbjct: 701 PTEAPTEASPEPA----PDPAPVAEEAAPS 726
Score = 30.0 bits (66), Expect = 7.5
Identities = 27/75 (36%), Positives = 32/75 (42%), Gaps = 16/75 (21%)
Query: 403 AATTTPTAKDGAPGEP------PLPGAEPPLAHPG--TDKGTEAKDPPAVENYPPPPAPA 454
AAT PT D +P EP P+ E P T+ TEA PA P PAP
Sbjct: 665 AATFKPTLPDLSPDEPSEALGFPMLEKEEEAHRPPSPTEAPTEASPEPA-----PDPAPV 719
Query: 455 PTDGSEPAPAPVADG 469
E AP+ V +G
Sbjct: 720 ---AEEAAPSAVEEG 731
>gi|29826319 adducin 1 (alpha) isoform a [Homo sapiens]
Length = 737
Score = 40.4 bits (93), Expect = 0.006
Identities = 31/90 (34%), Positives = 38/90 (42%), Gaps = 13/90 (14%)
Query: 389 TPIKAYSVLQATVAAATTTPTAKDGAPGEPPLPGAEPP-----LAHPGTDKGTEAKDPPA 443
TPIK L+ + TT D A +P LP P L P +K EA PP+
Sbjct: 614 TPIK----LEEDLVPEPTTGDDSDAATFKPTLPDLSPDEPSEALGFPMLEKEEEAHRPPS 669
Query: 444 VENYPPPPAPAPTDGSEPAPAPVADGDIPS 473
P +P P P PAPVA+ PS
Sbjct: 670 PTEAPTEASPEPA----PDPAPVAEEAAPS 695
Score = 30.0 bits (66), Expect = 7.5
Identities = 27/75 (36%), Positives = 32/75 (42%), Gaps = 16/75 (21%)
Query: 403 AATTTPTAKDGAPGEP------PLPGAEPPLAHPG--TDKGTEAKDPPAVENYPPPPAPA 454
AAT PT D +P EP P+ E P T+ TEA PA P PAP
Sbjct: 634 AATFKPTLPDLSPDEPSEALGFPMLEKEEEAHRPPSPTEAPTEASPEPA-----PDPAPV 688
Query: 455 PTDGSEPAPAPVADG 469
E AP+ V +G
Sbjct: 689 ---AEEAAPSAVEEG 700
>gi|4507691 transformation/transcription domain-associated protein
[Homo sapiens]
Length = 3830
Score = 40.4 bits (93), Expect = 0.006
Identities = 28/103 (27%), Positives = 37/103 (35%), Gaps = 15/103 (14%)
Query: 368 KDVLEGGNLRNALQELQQIIITPIKAYSVLQATVAAATTTPTAKDGA-----PGEPPLPG 422
K E GN R+ L + ++ + + Q + P ++ GA PG P P
Sbjct: 433 KSEQESGNGRDVLMRMLEVFVLKFHTIARYQLSAIFKKCKPQSELGAVEAALPGVPTAPA 492
Query: 423 AEPPLAHPGTDKGTEAKDPPAVENYPPPPAPAPTDGSEPAPAP 465
A P P P PPPP P P PAP P
Sbjct: 493 APGPAPSPA----------PVPAPPPPPPPPPPATPVTPAPVP 525
>gi|116256445 nuclear receptor co-repressor 2 isoform 2 [Homo
sapiens]
Length = 2462
Score = 40.4 bits (93), Expect = 0.006
Identities = 49/220 (22%), Positives = 77/220 (35%), Gaps = 16/220 (7%)
Query: 255 ELGARAAFTTPDHAPLSPQSSVASSGSEQTEEQGSSRNTFQEDGSGMKDVPSWLKSLRLH 314
E + A T A L+ SS + EE +++ E G + + S +
Sbjct: 589 EANSEEAITPQQSAELASMELNESSRWTE-EEMETAKKGLLEHGRNWSAIARMVGSKTVS 647
Query: 315 KYAAL-FSQMSYEEMMTLTEQHLESQNVTKGARHKIALSIQKLRERQSVLKSLEKDVLEG 373
+ F+ + + + +QH + AR K + E + +E + +E
Sbjct: 648 QCKNFYFNYKKRQNLDEILQQHKLKMEKERNARRKKKKAPAAASEEAAFPPVVEDEEMEA 707
Query: 374 ----GNLRNALQELQQIIITPIKAYSVLQATVAAATTT------PTAKDGAPGEPPLPGA 423
GN ++E + + S+ AA T P A GA G PP P
Sbjct: 708 SGVSGNEEEMVEEAEATVNNSSDTESIPSPHTEAAKDTGQNGPKPPATLGADGPPPGPPT 767
Query: 424 EPPLAHPGTDKGTEAKDPPAVENYPPPPAPAPTDGSEPAP 463
PP P + T A + P P PAP S P P
Sbjct: 768 PPPEDIPAPTEPTPASEATGA----PTPPPAPPSPSAPPP 803
Score = 32.7 bits (73), Expect = 1.2
Identities = 30/101 (29%), Positives = 41/101 (40%), Gaps = 13/101 (12%)
Query: 373 GGNLRNALQELQQIIITPIKAYSVLQATVAAATT------TPTAKDGA-PGEPPLPGAEP 425
GG L L + ++ P +A V + A T P A+ G P P G+EP
Sbjct: 1913 GGTLDGVYPTLMEPVLLPKEAPRVARPERPRADTGHAFLAKPPARSGLEPASSPSKGSEP 1972
Query: 426 -----PLAHPGTDKGTEAKDPPAVENYPPPPAPAPTDGSEP 461
P++ T T AK+ P PPAP P S+P
Sbjct: 1973 RPLVPPVSGHATIARTPAKNLAPHHASPDPPAP-PASASDP 2012
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.130 0.387
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,831,157
Number of Sequences: 37866
Number of extensions: 2000453
Number of successful extensions: 18798
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 207
Number of HSP's successfully gapped in prelim test: 780
Number of HSP's that attempted gapping in prelim test: 11412
Number of HSP's gapped (non-prelim): 6554
length of query: 694
length of database: 18,247,518
effective HSP length: 109
effective length of query: 585
effective length of database: 14,120,124
effective search space: 8260272540
effective search space used: 8260272540
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.