Guide to the Human Genome
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Name: PRKCQ Sequence: fasta or formatted (706aa) NCBI GI: 5453976
Description:

protein kinase C, theta

Referenced in:

Inositol Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.8         34           2
 C cysteine            4.0         28           1
 D aspartate           5.1         36           3
 E glutamate           7.9         56           3
 F phenylalanine       6.7         47           2
 G glycine             5.7         40           2
 H histidine           3.4         24           2
 I isoleucine          5.5         39           2
 K lysine              8.2         58           2
 L leucine             9.1         64           2
 M methionine          4.0         28           1
 N asparagine          4.7         33           2
 P proline             5.0         35           2
 Q glutamine           4.1         29           2
 R arginine            5.1         36           2
 S serine              4.7         33           1
 T threonine           3.8         27           2
 V valine              4.5         32           2
 W tryptophan          1.4         10           2
 Y tyrosine            2.4         17           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   protein kinase C, theta 
PRKCD                 0.606   protein kinase C, delta 
PRKCD                 0.606   protein kinase C, delta 
PRKCE                 0.368   protein kinase C, epsilon 
PRKCH                 0.355   protein kinase C, eta 
PRKCB                 0.254   protein kinase C, beta isoform 1 
PRKCA                 0.249   protein kinase C, alpha 
PRKCB                 0.245   protein kinase C, beta isoform 2 
PRKCG                 0.232   protein kinase C, gamma 
PRKCI                 0.214   protein kinase C, iota 
PKN2                  0.211   protein kinase N2 
PRKCZ                 0.210   protein kinase C, zeta isoform 1 
PKN1                  0.203   protein kinase N1 isoform 1 
PKN1                  0.203   protein kinase N1 isoform 2 
PRKCZ                 0.194   protein kinase C, zeta isoform 2 
PRKCZ                 0.194   protein kinase C, zeta isoform 2 
AKT2                  0.189   AKT2 kinase 
AKT3                  0.188   AKT3 kinase isoform 1 
AKT3                  0.188   AKT3 kinase isoform 2 
AKT1                  0.183   AKT1 kinase 
AKT1                  0.183   AKT1 kinase 
AKT1                  0.183   AKT1 kinase 
PKN3                  0.177   protein kinase PKNbeta 
SGK1                  0.168   serum/glucocorticoid regulated kinase 1 isoform 1 [H...
SGK1                  0.168   serum/glucocorticoid regulated kinase 1 isoform 4 [...
SGK1                  0.168   serum/glucocorticoid regulated kinase 1 isoform 3 [...
SGK1                  0.168   serum/glucocorticoid regulated kinase 1 isoform 2 [...
SGK3                  0.164   serum/glucocorticoid regulated kinase 3 isoform 1 [H...
SGK3                  0.164   serum/glucocorticoid regulated kinase 3 isoform 1 [H...
SGK2                  0.164   serum/glucocorticoid regulated kinase 2 isoform alph...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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