Guide to the Human Genome
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Name: OR4F5 Sequence: fasta or formatted (305aa) NCBI GI: 53828740
Description:

olfactory receptor, family 4, subfamily F, member 5

Referenced in:

Olfactory Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.2         16           1
 C cysteine            3.0          9           1
 D aspartate           4.3         13           1
 E glutamate           1.3          4           1
 F phenylalanine       9.2         28           2
 G glycine             4.9         15           2
 H histidine           3.0          9           1
 I isoleucine          9.8         30           2
 K lysine              4.3         13           1
 L leucine            13.4         41           2
 M methionine          3.6         11           1
 N asparagine          2.3          7           1
 P proline             3.6         11           1
 Q glutamine           2.3          7           1
 R arginine            2.6          8           1
 S serine              8.2         25           2
 T threonine           6.2         19           2
 V valine              8.5         26           2
 W tryptophan          1.0          3           1
 Y tyrosine            3.3         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactory receptor, family 4, subfamily F, member 5 ... 
OR4F17                0.988   olfactory receptor, family 4, subfamily F, member 17...
OR4F4                 0.985   olfactory receptor, family 4, subfamily F, member 4 ...
OR4K15                0.609   olfactory receptor, family 4, subfamily K, member 15...
OR4K1                 0.602   olfactory receptor, family 4, subfamily K, member 1 ...
OR4K5                 0.585   olfactory receptor, family 4, subfamily K, member 5 ...
OR4F6                 0.585   olfactory receptor, family 4, subfamily F, member 6 ...
OR4K14                0.585   olfactory receptor, family 4, subfamily K, member 14...
OR4F15                0.581   olfactory receptor, family 4, subfamily F, member 15...
OR4K13                0.578   olfactory receptor, family 4, subfamily K, member 13...
OR4F3                 0.576   olfactory receptor, family 4, subfamily F, member 3 ...
OR4F29                0.576   olfactory receptor, family 4, subfamily F, member 2...
OR4F16                0.576   olfactory receptor, family 4, subfamily F, member 16...
OR4F21                0.574   olfactory receptor, family 4, subfamily F, member 21...
OR4K17                0.573   olfactory receptor, family 4, subfamily K, member 17...
OR4K2                 0.568   olfactory receptor, family 4, subfamily K, member 2 ...
OR4L1                 0.550   olfactory receptor, family 4, subfamily L, member 1 ...
OR4Q3                 0.542   olfactory receptor, family 4, subfamily Q, member 3 ...
OR4D1                 0.515   olfactory receptor, family 4, subfamily D, member 1 ...
OR4D9                 0.511   olfactory receptor, family 4, subfamily D, member 9 ...
OR4N5                 0.509   olfactory receptor, family 4, subfamily N, member 5 ...
OR4M1                 0.506   olfactory receptor, family 4, subfamily M, member 1 ...
OR4D2                 0.501   olfactory receptor, family 4, subfamily D, member 2 ...
OR4S2                 0.499   olfactory receptor, family 4, subfamily S, member 2...
OR4D11                0.497   olfactory receptor, family 4, subfamily D, member 11...
OR4M2                 0.487   olfactory receptor, family 4, subfamily M, member 2 ...
OR4N4                 0.485   olfactory receptor, family 4, subfamily N, member 4 ...
OR4N2                 0.484   olfactory receptor, family 4, subfamily N, member 2 ...
OR4E2                 0.482   olfactory receptor, family 4, subfamily E, member 2 ...
OR4X2                 0.480   olfactory receptor, family 4, subfamily X, member 2 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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