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Search of human proteins with 52345387
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|52345387 meteorin, glial cell differentiation regulator-like
[Homo sapiens]
(311 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|52345387 meteorin, glial cell differentiation regulator-like ... 654 0.0
gi|13129000 meteorin, glial cell differentiation regulator [Homo... 217 9e-57
gi|21166382 neurexin 2 isoform beta precursor [Homo sapiens] 41 0.001
gi|122937496 WAS/WASL interacting protein family, member 3 [Homo... 40 0.002
gi|63025220 ring finger protein 215 [Homo sapiens] 40 0.003
gi|170014689 VPS10 domain receptor protein SORCS 2 [Homo sapiens] 39 0.008
gi|112382270 matrix metalloproteinase 17 preproprotein [Homo sap... 37 0.017
gi|79749430 FRAS1-related extracellular matrix protein 2 precurs... 37 0.022
gi|40255245 G protein-coupled receptor 51 [Homo sapiens] 37 0.029
gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens] 36 0.050
gi|156071470 hyperpolarization activated cyclic nucleotide-gated... 35 0.085
gi|65508004 Wilms tumor 1 isoform D [Homo sapiens] 35 0.11
gi|65507908 Wilms tumor 1 isoform C [Homo sapiens] 35 0.11
gi|65507817 Wilms tumor 1 isoform B [Homo sapiens] 35 0.11
gi|65507714 Wilms tumor 1 isoform A [Homo sapiens] 35 0.11
gi|16751923 WAP, follistatin/kazal, immunoglobulin, kunitz and n... 35 0.11
gi|82546824 forkhead box K1 [Homo sapiens] 35 0.11
gi|22027541 programmed cell death 7 [Homo sapiens] 35 0.11
gi|119395760 diaphanous 1 isoform 2 [Homo sapiens] 34 0.15
gi|119395758 diaphanous 1 isoform 1 [Homo sapiens] 34 0.15
gi|27597078 TYRO3 protein tyrosine kinase [Homo sapiens] 34 0.19
gi|24308458 Lix1 homolog (mouse) like [Homo sapiens] 34 0.19
gi|153792074 proline rich 12 [Homo sapiens] 34 0.19
gi|55925576 insulin-like growth factor binding protein 2, 36kDa ... 33 0.25
gi|116256475 zinc finger protein 827 [Homo sapiens] 33 0.25
gi|166795236 tumor-associated calcium signal transducer 2 precur... 33 0.25
gi|66346695 fibrillin 2 precursor [Homo sapiens] 33 0.32
gi|16950645 neurotrophic factor artemin isoform 2 [Homo sapiens] 33 0.32
gi|209954781 neurotrophic factor artemin isoform 1 precursor [Ho... 33 0.32
gi|209954778 neurotrophic factor artemin isoform 3 precursor [Ho... 33 0.32
>gi|52345387 meteorin, glial cell differentiation regulator-like
[Homo sapiens]
Length = 311
Score = 654 bits (1688), Expect = 0.0
Identities = 311/311 (100%), Positives = 311/311 (100%)
Query: 1 MRGAARAAWGRAGQPWPRPPAPGPPPPPLPLLLLLLAGLLGGAGAQYSSDRCSWKGSGLT 60
MRGAARAAWGRAGQPWPRPPAPGPPPPPLPLLLLLLAGLLGGAGAQYSSDRCSWKGSGLT
Sbjct: 1 MRGAARAAWGRAGQPWPRPPAPGPPPPPLPLLLLLLAGLLGGAGAQYSSDRCSWKGSGLT 60
Query: 61 HEAHRKEVEQVYLRCAAGAVEWMYPTGALIVNLRPNTFSPARHLTVCIRSFTDSSGANIY 120
HEAHRKEVEQVYLRCAAGAVEWMYPTGALIVNLRPNTFSPARHLTVCIRSFTDSSGANIY
Sbjct: 61 HEAHRKEVEQVYLRCAAGAVEWMYPTGALIVNLRPNTFSPARHLTVCIRSFTDSSGANIY 120
Query: 121 LEKTGELRLLVPDGDGRPGRVQCFGLEQGGLFVEATPQQDIGRRTTGFQYELVRRHRASD 180
LEKTGELRLLVPDGDGRPGRVQCFGLEQGGLFVEATPQQDIGRRTTGFQYELVRRHRASD
Sbjct: 121 LEKTGELRLLVPDGDGRPGRVQCFGLEQGGLFVEATPQQDIGRRTTGFQYELVRRHRASD 180
Query: 181 LHELSAPCRPCSDTEVLLAVCTSDFAVRGSIQQVTHEPERQDSAIHLRVSRLYRQKSRVF 240
LHELSAPCRPCSDTEVLLAVCTSDFAVRGSIQQVTHEPERQDSAIHLRVSRLYRQKSRVF
Sbjct: 181 LHELSAPCRPCSDTEVLLAVCTSDFAVRGSIQQVTHEPERQDSAIHLRVSRLYRQKSRVF 240
Query: 241 EPVPEGDGHWQGRVRTLLECGVRPGHGDFLFTGHMHFGEARLGCAPRFKDFQRMYRDAQE 300
EPVPEGDGHWQGRVRTLLECGVRPGHGDFLFTGHMHFGEARLGCAPRFKDFQRMYRDAQE
Sbjct: 241 EPVPEGDGHWQGRVRTLLECGVRPGHGDFLFTGHMHFGEARLGCAPRFKDFQRMYRDAQE 300
Query: 301 RGLNPCEVGTD 311
RGLNPCEVGTD
Sbjct: 301 RGLNPCEVGTD 311
>gi|13129000 meteorin, glial cell differentiation regulator [Homo
sapiens]
Length = 293
Score = 217 bits (553), Expect = 9e-57
Identities = 135/293 (46%), Positives = 168/293 (57%), Gaps = 17/293 (5%)
Query: 27 PPLPLLLLLLAGLLGGAG-AQYSSDRCSWKGSGLTHEAHRKEVEQVYLRCAAGAVEWMYP 85
P LL L GLL A A YS +RCSW+GSGLT E V Q+ L CA GAVEW+YP
Sbjct: 4 PAAALLCALCCGLLAPAARAGYSEERCSWRGSGLTQEP--GSVGQLALACAEGAVEWLYP 61
Query: 86 TGALIVNLRPNTFSPARHLTVCIRSFTDSSGANIYLEKT-GELRLLVPDGDGRPGR--VQ 142
GAL + L AR C+R +GA ++ E+ G L LL+ +G G G V+
Sbjct: 62 AGALRLTL-GGPDPRARPGIACLRPVRPFAGAQVFAERAGGALELLLAEGPGPAGGRCVR 120
Query: 143 CFGLEQGGLFVEATPQQDIGRRTTGFQYELVRRHRAS---DLHEL--SAPCRPCSDTEVL 197
E+ LF++ATP QDI RR F++EL R H L CRPCSD E+L
Sbjct: 121 WGPRERRALFLQATPHQDISRRVAAFRFELREDGRPELPPQAHGLGVDGACRPCSDAELL 180
Query: 198 LAVCTSDFAVRGSIQQVTHEPERQDSAIHLRVSRLYRQKSRVFEPVPEGDGHWQG--RVR 255
LA CTSDF + G I VTH+ E Q+S I + +R+ RQ +F+ GD QG +R
Sbjct: 181 LAACTSDFVIHGIIHGVTHDVELQESVITVVAARVLRQTPPLFQAGRSGD---QGLTSIR 237
Query: 256 TLLECGVRPGHGDFLFTGHMHFGEARLGCAPRFKDFQRMYRDAQERGLNPCEV 308
T L CGV PG G FLF G FGEARLGCAPRF++F+R Y A+ L+PCEV
Sbjct: 238 TPLRCGVHPGPGTFLFMGWSRFGEARLGCAPRFQEFRRAYEAARAAHLHPCEV 290
>gi|21166382 neurexin 2 isoform beta precursor [Homo sapiens]
Length = 666
Score = 41.2 bits (95), Expect = 0.001
Identities = 27/50 (54%), Positives = 29/50 (58%), Gaps = 8/50 (16%)
Query: 17 PRPPAPGPPPPP-LPLLLLLLAGLLGGA-GAQYSSDRCSWKGSGLTHEAH 64
P PP P PPPPP LPLL LLL LLG A GA+ SS + TH H
Sbjct: 21 PLPPPPPPPPPPLLPLLPLLLLLLLGAAEGARVSSSLST------THHVH 64
Score = 33.9 bits (76), Expect = 0.19
Identities = 22/42 (52%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Query: 3 GAARAAWGRAGQPWPRPPAPGPP-PPPLPLLLLLLAGLLGGA 43
G R AG P PP P PP P LPLLLLLL G GA
Sbjct: 10 GCPRRPPALAGPLPPPPPPPPPPLLPLLPLLLLLLLGAAEGA 51
>gi|122937496 WAS/WASL interacting protein family, member 3 [Homo
sapiens]
Length = 483
Score = 40.4 bits (93), Expect = 0.002
Identities = 18/28 (64%), Positives = 18/28 (64%)
Query: 3 GAARAAWGRAGQPWPRPPAPGPPPPPLP 30
GAAR A R P P PP P PPPPPLP
Sbjct: 160 GAARTAPPRPNVPAPPPPTPPPPPPPLP 187
Score = 29.3 bits (64), Expect = 4.7
Identities = 11/16 (68%), Positives = 11/16 (68%)
Query: 15 PWPRPPAPGPPPPPLP 30
P P PP P P PPPLP
Sbjct: 223 PPPPPPPPPPTPPPLP 238
>gi|63025220 ring finger protein 215 [Homo sapiens]
Length = 377
Score = 40.0 bits (92), Expect = 0.003
Identities = 24/54 (44%), Positives = 27/54 (50%), Gaps = 5/54 (9%)
Query: 10 GRAGQPWPRPPAPGPPPPPLPLLLL-----LLAGLLGGAGAQYSSDRCSWKGSG 58
G A +P R P P PPPPP PLLLL L GL G A S+ + G G
Sbjct: 2 GPAARPALRSPPPPPPPPPSPLLLLLPLLPLWLGLAGPGAAADGSEPAAGAGRG 55
>gi|170014689 VPS10 domain receptor protein SORCS 2 [Homo sapiens]
Length = 1159
Score = 38.5 bits (88), Expect = 0.008
Identities = 24/49 (48%), Positives = 27/49 (55%), Gaps = 8/49 (16%)
Query: 2 RGAARAAWGRAGQPWPRPPAPGPPPPPLP------LLLLLLAGLLGGAG 44
RG +RA+ G P R P+PG PPPP LLLLLL G G AG
Sbjct: 4 RGPSRASKGPG--PTARAPSPGAPPPPRSPRSRPLLLLLLLLGACGAAG 50
>gi|112382270 matrix metalloproteinase 17 preproprotein [Homo
sapiens]
Length = 603
Score = 37.4 bits (85), Expect = 0.017
Identities = 23/46 (50%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
Query: 6 RAAWGRAGQPWPRPPAPGPPPPPLPLLLLLLAGLLGGAGAQYSSDR 51
RAA G P P PP PG PLPLLLLL G GG A + R
Sbjct: 4 RAARG----PGPPPPGPGLSRLPLPLLLLLALGTRGGCAAPAPAPR 45
>gi|79749430 FRAS1-related extracellular matrix protein 2 precursor
[Homo sapiens]
Length = 3169
Score = 37.0 bits (84), Expect = 0.022
Identities = 28/80 (35%), Positives = 38/80 (47%), Gaps = 6/80 (7%)
Query: 22 PGPPPPP-LPLLLLLLAGLLGGAGAQYSSDRCSWKGSGLTHEAHRKEVEQVY-----LRC 75
PGPPPPP L LLLLLL L+ AQ ++ + GL A E + LR
Sbjct: 22 PGPPPPPRLLLLLLLLLSLVSRVPAQPAAFGRALLSPGLAGAAGVPAEEAIVLANRGLRV 81
Query: 76 AAGAVEWMYPTGALIVNLRP 95
G W+ P L++ ++P
Sbjct: 82 PFGREVWLDPLHDLVLQVQP 101
>gi|40255245 G protein-coupled receptor 51 [Homo sapiens]
Length = 941
Score = 36.6 bits (83), Expect = 0.029
Identities = 19/29 (65%), Positives = 20/29 (68%), Gaps = 3/29 (10%)
Query: 12 AGQPWPRPPAPGPPPPPLPLLLLLLAGLL 40
+GQP P PP PPPPP LLLLLL LL
Sbjct: 7 SGQPGPPPP---PPPPPARLLLLLLLPLL 32
>gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens]
Length = 502
Score = 35.8 bits (81), Expect = 0.050
Identities = 19/44 (43%), Positives = 20/44 (45%), Gaps = 9/44 (20%)
Query: 10 GRAGQPWPRPPAP---------GPPPPPLPLLLLLLAGLLGGAG 44
G G P P PP P GP PPPLP L+ GL G G
Sbjct: 387 GAGGPPMPPPPPPPPPPPSSGNGPAPPPLPPALVPAGGLAPGGG 430
Score = 30.0 bits (66), Expect = 2.7
Identities = 14/24 (58%), Positives = 14/24 (58%), Gaps = 5/24 (20%)
Query: 10 GRAGQPWPRPPAPG-----PPPPP 28
GR G P P PPA G PPPPP
Sbjct: 363 GRGGPPPPPPPATGRSGPLPPPPP 386
>gi|156071470 hyperpolarization activated cyclic nucleotide-gated
potassium channel 2 [Homo sapiens]
Length = 889
Score = 35.0 bits (79), Expect = 0.085
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 5 ARAAWGRAGQPWPRPPAPGPPPPPLP 30
AR GR G+ PAPGPPPPP P
Sbjct: 3 ARGGGGRPGESPGATPAPGPPPPPPP 28
Score = 28.9 bits (63), Expect = 6.1
Identities = 15/33 (45%), Positives = 16/33 (48%), Gaps = 5/33 (15%)
Query: 3 GAARAAWGRAGQPWPRPPAPG-----PPPPPLP 30
G + A G P P PPAP PPPPP P
Sbjct: 11 GESPGATPAPGPPPPPPPAPPQQQPPPPPPPAP 43
>gi|65508004 Wilms tumor 1 isoform D [Homo sapiens]
Length = 517
Score = 34.7 bits (78), Expect = 0.11
Identities = 18/37 (48%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Query: 7 AAWGRAGQPWPRPPAPGPPPPPLPLLLLLLAGLLGGA 43
+A+G G P P PPAP PPPPP P + GGA
Sbjct: 114 SAYGSLGGPAP-PPAPPPPPPPPPHSFIKQEPSWGGA 149
>gi|65507908 Wilms tumor 1 isoform C [Homo sapiens]
Length = 500
Score = 34.7 bits (78), Expect = 0.11
Identities = 18/37 (48%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Query: 7 AAWGRAGQPWPRPPAPGPPPPPLPLLLLLLAGLLGGA 43
+A+G G P P PPAP PPPPP P + GGA
Sbjct: 114 SAYGSLGGPAP-PPAPPPPPPPPPHSFIKQEPSWGGA 149
>gi|65507817 Wilms tumor 1 isoform B [Homo sapiens]
Length = 514
Score = 34.7 bits (78), Expect = 0.11
Identities = 18/37 (48%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Query: 7 AAWGRAGQPWPRPPAPGPPPPPLPLLLLLLAGLLGGA 43
+A+G G P P PPAP PPPPP P + GGA
Sbjct: 114 SAYGSLGGPAP-PPAPPPPPPPPPHSFIKQEPSWGGA 149
>gi|65507714 Wilms tumor 1 isoform A [Homo sapiens]
Length = 497
Score = 34.7 bits (78), Expect = 0.11
Identities = 18/37 (48%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Query: 7 AAWGRAGQPWPRPPAPGPPPPPLPLLLLLLAGLLGGA 43
+A+G G P P PPAP PPPPP P + GGA
Sbjct: 114 SAYGSLGGPAP-PPAPPPPPPPPPHSFIKQEPSWGGA 149
>gi|16751923 WAP, follistatin/kazal, immunoglobulin, kunitz and
netrin domain containing 1 precursor [Homo sapiens]
Length = 548
Score = 34.7 bits (78), Expect = 0.11
Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 187 PCRPCS-DTEVLLAVCTSDFAVRGSIQQVTHEPE 219
PCR C +++ L++C SDFA+ G + +V EPE
Sbjct: 416 PCRACRLRSKLALSLCRSDFAIVGRLTEVLEEPE 449
>gi|82546824 forkhead box K1 [Homo sapiens]
Length = 733
Score = 34.7 bits (78), Expect = 0.11
Identities = 16/30 (53%), Positives = 18/30 (60%)
Query: 14 QPWPRPPAPGPPPPPLPLLLLLLAGLLGGA 43
QP P P P PPPPPLP + AG GG+
Sbjct: 45 QPQPPPGPPPPPPPPLPPGAIAGAGSSGGS 74
Score = 32.7 bits (73), Expect = 0.42
Identities = 22/54 (40%), Positives = 26/54 (48%), Gaps = 8/54 (14%)
Query: 4 AARAAWGRAGQP----WPRPPAPGPPPPPLPLLLLLLAGLLGGAGAQYSSDRCS 53
AA AA+ A P P+PP PPPPP P L G + GAG+ S S
Sbjct: 29 AAAAAFPAAAPPPAPAQPQPPPGPPPPPPPP----LPPGAIAGAGSSGGSSGVS 78
>gi|22027541 programmed cell death 7 [Homo sapiens]
Length = 485
Score = 34.7 bits (78), Expect = 0.11
Identities = 15/24 (62%), Positives = 16/24 (66%), Gaps = 3/24 (12%)
Query: 10 GRAGQPWPRPPAPGP---PPPPLP 30
GR G P P+PP P P PPPPLP
Sbjct: 10 GRPGPPPPQPPPPAPFGCPPPPLP 33
Score = 30.0 bits (66), Expect = 2.7
Identities = 12/19 (63%), Positives = 13/19 (68%)
Query: 10 GRAGQPWPRPPAPGPPPPP 28
G AG +P PP P PPPPP
Sbjct: 75 GGAGAFYPVPPPPLPPPPP 93
>gi|119395760 diaphanous 1 isoform 2 [Homo sapiens]
Length = 1263
Score = 34.3 bits (77), Expect = 0.15
Identities = 15/25 (60%), Positives = 15/25 (60%), Gaps = 4/25 (16%)
Query: 10 GRAGQPWPRPPAPG----PPPPPLP 30
G AG P P PP PG PPPPP P
Sbjct: 700 GEAGMPPPPPPLPGGPGIPPPPPFP 724
Score = 33.9 bits (76), Expect = 0.19
Identities = 16/26 (61%), Positives = 16/26 (61%), Gaps = 5/26 (19%)
Query: 10 GRAGQPWPRPPAPG-----PPPPPLP 30
G AG P P PP PG PPPPPLP
Sbjct: 687 GSAGIPPPPPPLPGEAGMPPPPPPLP 712
Score = 31.2 bits (69), Expect = 1.2
Identities = 11/14 (78%), Positives = 11/14 (78%)
Query: 17 PRPPAPGPPPPPLP 30
P PP P PPPPPLP
Sbjct: 600 PPPPPPPPPPPPLP 613
Score = 30.8 bits (68), Expect = 1.6
Identities = 15/26 (57%), Positives = 15/26 (57%), Gaps = 5/26 (19%)
Query: 10 GRAGQPWPRPPAPG-----PPPPPLP 30
G A P P PP PG PPPPPLP
Sbjct: 674 GSARIPPPPPPLPGSAGIPPPPPPLP 699
Score = 28.5 bits (62), Expect = 8.0
Identities = 15/32 (46%), Positives = 16/32 (50%), Gaps = 10/32 (31%)
Query: 10 GRAGQPWPRPPAPG----------PPPPPLPL 31
G +G P PPAPG PPPPP PL
Sbjct: 581 GDSGTIIPPPPAPGDSTTPPPPPPPPPPPPPL 612
>gi|119395758 diaphanous 1 isoform 1 [Homo sapiens]
Length = 1272
Score = 34.3 bits (77), Expect = 0.15
Identities = 15/25 (60%), Positives = 15/25 (60%), Gaps = 4/25 (16%)
Query: 10 GRAGQPWPRPPAPG----PPPPPLP 30
G AG P P PP PG PPPPP P
Sbjct: 709 GEAGMPPPPPPLPGGPGIPPPPPFP 733
Score = 33.9 bits (76), Expect = 0.19
Identities = 16/26 (61%), Positives = 16/26 (61%), Gaps = 5/26 (19%)
Query: 10 GRAGQPWPRPPAPG-----PPPPPLP 30
G AG P P PP PG PPPPPLP
Sbjct: 696 GSAGIPPPPPPLPGEAGMPPPPPPLP 721
Score = 31.2 bits (69), Expect = 1.2
Identities = 11/14 (78%), Positives = 11/14 (78%)
Query: 17 PRPPAPGPPPPPLP 30
P PP P PPPPPLP
Sbjct: 609 PPPPPPPPPPPPLP 622
Score = 30.8 bits (68), Expect = 1.6
Identities = 15/26 (57%), Positives = 15/26 (57%), Gaps = 5/26 (19%)
Query: 10 GRAGQPWPRPPAPG-----PPPPPLP 30
G A P P PP PG PPPPPLP
Sbjct: 683 GSARIPPPPPPLPGSAGIPPPPPPLP 708
Score = 28.5 bits (62), Expect = 8.0
Identities = 15/32 (46%), Positives = 16/32 (50%), Gaps = 10/32 (31%)
Query: 10 GRAGQPWPRPPAPG----------PPPPPLPL 31
G +G P PPAPG PPPPP PL
Sbjct: 590 GDSGTIIPPPPAPGDSTTPPPPPPPPPPPPPL 621
>gi|27597078 TYRO3 protein tyrosine kinase [Homo sapiens]
Length = 890
Score = 33.9 bits (76), Expect = 0.19
Identities = 20/37 (54%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
Query: 4 AARAAWGRAGQPWPRPPAPGPPPPPLPLLLLLLAGLL 40
A R + GR G P P P PPPP L LLL LA LL
Sbjct: 2 ALRRSMGRPGLP----PLPLPPPPRLGLLLAALASLL 34
>gi|24308458 Lix1 homolog (mouse) like [Homo sapiens]
Length = 337
Score = 33.9 bits (76), Expect = 0.19
Identities = 16/29 (55%), Positives = 16/29 (55%)
Query: 3 GAARAAWGRAGQPWPRPPAPGPPPPPLPL 31
GAA A P P PP P PPPPPL L
Sbjct: 30 GAAAATATPPAGPPPAPPPPAPPPPPLLL 58
Score = 32.7 bits (73), Expect = 0.42
Identities = 20/38 (52%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Query: 3 GAARAAWGRAGQPWPRPPAPGPP-PPPLPLLLLLLAGL 39
G AA A P PPAP PP PPP PLLL GL
Sbjct: 27 GVTGAAAATATPPAGPPPAPPPPAPPPPPLLLSGAPGL 64
>gi|153792074 proline rich 12 [Homo sapiens]
Length = 2036
Score = 33.9 bits (76), Expect = 0.19
Identities = 15/23 (65%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
Query: 11 RAGQPWPRPPAPGPPPPPLPLLL 33
R G P P PP P PPPPP+PL L
Sbjct: 829 RDGAPQPPPPPP-PPPPPMPLQL 850
Score = 30.8 bits (68), Expect = 1.6
Identities = 22/54 (40%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
Query: 7 AAWGRAGQPWPRPPAPGPPPPP--LPLLLLLLAGLLGGAGAQYSSDRCSWKGSG 58
A G A P RP P PPPPP LP LLA A A S + SG
Sbjct: 217 AGLGPAQTPPYRPGPPDPPPPPRHLPTQFNLLASSSAAAAAAEQSSPQLYNFSG 270
Score = 30.0 bits (66), Expect = 2.7
Identities = 11/18 (61%), Positives = 12/18 (66%)
Query: 15 PWPRPPAPGPPPPPLPLL 32
P P+P P PPPPP P L
Sbjct: 1465 PTPQPQPPPPPPPPQPAL 1482
>gi|55925576 insulin-like growth factor binding protein 2, 36kDa
[Homo sapiens]
Length = 328
Score = 33.5 bits (75), Expect = 0.25
Identities = 18/28 (64%), Positives = 18/28 (64%), Gaps = 2/28 (7%)
Query: 19 PPAPGPPPPPLPLL--LLLLAGLLGGAG 44
P P PPPP LPLL LLLL G GG G
Sbjct: 8 PALPLPPPPLLPLLPLLLLLLGASGGGG 35
>gi|116256475 zinc finger protein 827 [Homo sapiens]
Length = 1077
Score = 33.5 bits (75), Expect = 0.25
Identities = 15/22 (68%), Positives = 15/22 (68%)
Query: 15 PWPRPPAPGPPPPPLPLLLLLL 36
P P PP P PPPPP L LLLL
Sbjct: 330 PPPPPPPPPPPPPPQSLELLLL 351
Score = 30.8 bits (68), Expect = 1.6
Identities = 14/22 (63%), Positives = 14/22 (63%)
Query: 15 PWPRPPAPGPPPPPLPLLLLLL 36
P P PP P PPPPP L LLL
Sbjct: 329 PPPPPPPPPPPPPPPQSLELLL 350
>gi|166795236 tumor-associated calcium signal transducer 2
precursor [Homo sapiens]
Length = 323
Score = 33.5 bits (75), Expect = 0.25
Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 18 RPPAPGPPPPPLPLLLLLLAGLLGGAGAQYSSDRCSWKGSGLT 60
R P PPP LPLLLL+LA + G AQ D C+ + +T
Sbjct: 3 RGPGLAPPPLRLPLLLLVLAAVTGHTAAQ---DNCTCPTNKMT 42
>gi|66346695 fibrillin 2 precursor [Homo sapiens]
Length = 2912
Score = 33.1 bits (74), Expect = 0.32
Identities = 17/35 (48%), Positives = 18/35 (51%)
Query: 8 AWGRAGQPWPRPPAPGPPPPPLPLLLLLLAGLLGG 42
A G AGQP P PP P P PP + AG GG
Sbjct: 23 AQGTAGQPQPPPPKPPRPQPPPQQVRSATAGSEGG 57
>gi|16950645 neurotrophic factor artemin isoform 2 [Homo sapiens]
Length = 237
Score = 33.1 bits (74), Expect = 0.32
Identities = 16/33 (48%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Query: 3 GAARAAW--GRAGQPWPRPPAPGPPPPPLPLLL 33
G A W GRA +P P+P P PPPP P L
Sbjct: 84 GGRTARWCSGRARRPPPQPSRPAPPPPAPPSAL 116
>gi|209954781 neurotrophic factor artemin isoform 1 precursor
[Homo sapiens]
Length = 220
Score = 33.1 bits (74), Expect = 0.32
Identities = 16/33 (48%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Query: 3 GAARAAW--GRAGQPWPRPPAPGPPPPPLPLLL 33
G A W GRA +P P+P P PPPP P L
Sbjct: 67 GGRTARWCSGRARRPPPQPSRPAPPPPAPPSAL 99
>gi|209954778 neurotrophic factor artemin isoform 3 precursor [Homo
sapiens]
Length = 228
Score = 33.1 bits (74), Expect = 0.32
Identities = 16/33 (48%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Query: 3 GAARAAW--GRAGQPWPRPPAPGPPPPPLPLLL 33
G A W GRA +P P+P P PPPP P L
Sbjct: 75 GGRTARWCSGRARRPPPQPSRPAPPPPAPPSAL 107
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.140 0.452
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,296,340
Number of Sequences: 37866
Number of extensions: 859522
Number of successful extensions: 12391
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 208
Number of HSP's successfully gapped in prelim test: 96
Number of HSP's that attempted gapping in prelim test: 9284
Number of HSP's gapped (non-prelim): 2388
length of query: 311
length of database: 18,247,518
effective HSP length: 102
effective length of query: 209
effective length of database: 14,385,186
effective search space: 3006503874
effective search space used: 3006503874
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.