Guide to the Human Genome
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Name: OR2T29 Sequence: fasta or formatted (309aa) NCBI GI: 52317217
Description:

olfactory receptor, family 2, subfamily T, member 29

Referenced in:

Olfactory Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.1         19           2
 C cysteine            3.6         11           2
 D aspartate           2.9          9           1
 E glutamate           2.3          7           1
 F phenylalanine       6.5         20           2
 G glycine             3.9         12           1
 H histidine           3.9         12           2
 I isoleucine          5.5         17           2
 K lysine              3.2         10           2
 L leucine            15.2         47           2
 M methionine          6.8         21           2
 N asparagine          2.3          7           1
 P proline             4.5         14           1
 Q glutamine           1.3          4           1
 R arginine            3.2         10           1
 S serine              8.4         26           3
 T threonine           5.8         18           1
 V valine              9.1         28           2
 W tryptophan          0.6          2           1
 Y tyrosine            4.9         15           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactory receptor, family 2, subfamily T, member 29... 
OR2T5                 0.995   olfactory receptor, family 2, subfamily T, member 5 ...
OR2T4                 0.905   olfactory receptor, family 2, subfamily T, member 4 ...
OR2T10                0.709   olfactory receptor, family 2, subfamily T, member 10...
OR2T3                 0.667   olfactory receptor, family 2, subfamily T, member 3 ...
OR2T2                 0.654   olfactory receptor, family 2, subfamily T, member 2 ...
OR2T34                0.654   olfactory receptor, family 2, subfamily T, member 34...
OR2T35                0.644   olfactory receptor, family 2, subfamily T, member 35...
OR2T11                0.639   olfactory receptor, family 2, subfamily T, member 11...
OR2T27                0.632   olfactory receptor, family 2, subfamily T, member 27...
OR2T1                 0.620   olfactory receptor, family 2, subfamily T, member 1 ...
OR2T6                 0.587   olfactory receptor, family 2, subfamily T, member 6 ...
OR2T33                0.540   olfactory receptor, family 2, subfamily T, member 33...
OR2M2                 0.525   olfactory receptor, family 2, subfamily M, member 2 ...
OR2T8                 0.522   olfactory receptor, family 2, subfamily T, member 8 ...
OR2T12                0.518   olfactory receptor, family 2, subfamily T, member 12...
OR2M4                 0.515   olfactory receptor, family 2, subfamily M, member 4 ...
OR2M3                 0.507   olfactory receptor, family 2, subfamily M, member 3 ...
OR2M7                 0.502   olfactory receptor, family 2, subfamily M, member 7 ...
OR2M5                 0.500   olfactory receptor, family 2, subfamily M, member 5 ...
OR2L2                 0.497   olfactory receptor, family 2, subfamily L, member 2 ...
OR2V2                 0.493   olfactory receptor, family 2, subfamily V, member 2 ...
OR2AG2                0.483   olfactory receptor, family 2, subfamily AG, member 2...
OR2L8                 0.482   olfactory receptor, family 2, subfamily L, member 8 ...
OR2L3                 0.480   olfactory receptor, family 2, subfamily L, member 3 ...
OR2AG1                0.468   olfactory receptor, family 2, subfamily AG, member 1...
OR2L13                0.463   olfactory receptor, family 2, subfamily L, member 13...
OR2AE1                0.445   olfactory receptor, family 2, subfamily AE, member 1...
OR2AK2                0.445   olfactory receptor, family 2, subfamily AK, member 2...
OR2Z1                 0.440   olfactory receptor, family 2, subfamily Z, member 1 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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