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Search of human proteins with 5174671
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|5174671 chemokine (C-C motif) ligand 26 precursor [Homo
sapiens]
(94 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|5174671 chemokine (C-C motif) ligand 26 precursor [Homo sapiens] 196 3e-51
gi|47824887 chemokine (C-C motif) ligand 4-like 1 precursor [Hom... 77 4e-15
gi|46275832 chemokine (C-C motif) ligand 4-like 2 precursor [Hom... 77 4e-15
gi|4506843 chemokine (C-C motif) ligand 3 [Homo sapiens] 73 6e-14
gi|27477072 chemokine (C-C motif) ligand 3-like 1 precursor [Hom... 72 1e-13
gi|93589094 chemokine (C-C motif) ligand 3-like 3 precursor [Hom... 72 1e-13
gi|22538814 small inducible cytokine A5 precursor [Homo sapiens] 71 2e-13
gi|4506845 chemokine C-C motif ligand 4 isoform 1 precursor [Hom... 70 3e-13
gi|4885587 small inducible cytokine A13 precursor [Homo sapiens] 67 4e-12
gi|14589961 chemokine (C-C motif) ligand 14 isoform 1 precursor ... 66 7e-12
gi|4506831 small inducible cytokine A18 precursor [Homo sapiens] 65 2e-11
gi|14589959 chemokine (C-C motif) ligand 14 isoform 2 precursor ... 60 4e-10
gi|4506827 small inducible cytokine A11 precursor [Homo sapiens] 59 8e-10
gi|4506829 small inducible cytokine A17 precursor [Homo sapiens] 59 8e-10
gi|13435402 chemokine (C-C motif) ligand 7 precursor [Homo sapiens] 59 8e-10
gi|4759074 small inducible cytokine A16 precursor [Homo sapiens] 56 7e-09
gi|22165427 small inducible cytokine A24 precursor [Homo sapiens] 55 2e-08
gi|22538806 small inducible cytokine A23 isoform CKbeta8-1 precu... 54 2e-08
gi|22538808 small inducible cytokine A23 isoform CKbeta8 precurs... 54 3e-08
gi|22538816 small inducible cytokine A8 precursor [Homo sapiens] 53 5e-08
gi|5454040 small inducible cytokine A19 precursor [Homo sapiens] 53 5e-08
gi|14602449 chemokine (C-C motif) ligand 15 precursor [Homo sapi... 52 1e-07
gi|4506833 small inducible cytokine A1 precursor [Homo sapiens] 49 7e-07
gi|4506841 small inducible cytokine A2 precursor [Homo sapiens] 49 1e-06
gi|4506853 chemokine (C motif) ligand 1 [Homo sapiens] 47 4e-06
gi|22538804 small inducible cytokine A22 precursor [Homo sapiens] 45 1e-05
gi|4506855 chemokine (C motif) ligand 2 [Homo sapiens] 45 1e-05
gi|4506835 small inducible cytokine A21 precursor [Homo sapiens] 45 2e-05
gi|22538796 small inducible cytokine A25 precursor [Homo sapiens] 44 2e-05
gi|194239688 chemokine (C-C motif) ligand 20 isoform 2 [Homo sap... 44 3e-05
>gi|5174671 chemokine (C-C motif) ligand 26 precursor [Homo
sapiens]
Length = 94
Score = 196 bits (499), Expect = 3e-51
Identities = 94/94 (100%), Positives = 94/94 (100%)
Query: 1 MMGLSLASAVLLASLLSLHLGTATRGSDISKTCCFQYSHKPLPWTWVRSYEFTSNSCSQR 60
MMGLSLASAVLLASLLSLHLGTATRGSDISKTCCFQYSHKPLPWTWVRSYEFTSNSCSQR
Sbjct: 1 MMGLSLASAVLLASLLSLHLGTATRGSDISKTCCFQYSHKPLPWTWVRSYEFTSNSCSQR 60
Query: 61 AVIFTTKRGKKVCTHPRKKWVQKYISLLKTPKQL 94
AVIFTTKRGKKVCTHPRKKWVQKYISLLKTPKQL
Sbjct: 61 AVIFTTKRGKKVCTHPRKKWVQKYISLLKTPKQL 94
>gi|47824887 chemokine (C-C motif) ligand 4-like 1 precursor [Homo
sapiens]
Length = 92
Score = 76.6 bits (187), Expect = 4e-15
Identities = 39/80 (48%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Query: 6 LASAVLLASLLSLHLGTATRGSDISKTCCFQYSHKPLPWTWVRSYEFTSNSCSQRAVIFT 65
L+ VL+A+ SL L +A GSD CCF Y+ + LP +V Y TS+ CSQ AV+F
Sbjct: 8 LSLLVLVAAFCSLAL-SAPMGSDPPTACCFSYTARKLPRNFVVDYYETSSLCSQPAVVFQ 66
Query: 66 TKRGKKVCTHPRKKWVQKYI 85
TKRGK+VC P + WVQ+Y+
Sbjct: 67 TKRGKQVCADPSESWVQEYV 86
>gi|46275832 chemokine (C-C motif) ligand 4-like 2 precursor [Homo
sapiens]
Length = 92
Score = 76.6 bits (187), Expect = 4e-15
Identities = 39/80 (48%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Query: 6 LASAVLLASLLSLHLGTATRGSDISKTCCFQYSHKPLPWTWVRSYEFTSNSCSQRAVIFT 65
L+ VL+A+ SL L +A GSD CCF Y+ + LP +V Y TS+ CSQ AV+F
Sbjct: 8 LSLLVLVAAFCSLAL-SAPMGSDPPTACCFSYTARKLPRNFVVDYYETSSLCSQPAVVFQ 66
Query: 66 TKRGKKVCTHPRKKWVQKYI 85
TKRGK+VC P + WVQ+Y+
Sbjct: 67 TKRGKQVCADPSESWVQEYV 86
>gi|4506843 chemokine (C-C motif) ligand 3 [Homo sapiens]
Length = 92
Score = 72.8 bits (177), Expect = 6e-14
Identities = 33/83 (39%), Positives = 52/83 (62%)
Query: 7 ASAVLLASLLSLHLGTATRGSDISKTCCFQYSHKPLPWTWVRSYEFTSNSCSQRAVIFTT 66
A AVLL ++ + +A+ +D CCF Y+ + +P ++ Y TS+ CS+ VIF T
Sbjct: 7 ALAVLLCTMALCNQFSASLAADTPTACCFSYTSRQIPQNFIADYFETSSQCSKPGVIFLT 66
Query: 67 KRGKKVCTHPRKKWVQKYISLLK 89
KR ++VC P ++WVQKY+S L+
Sbjct: 67 KRSRQVCADPSEEWVQKYVSDLE 89
>gi|27477072 chemokine (C-C motif) ligand 3-like 1 precursor [Homo
sapiens]
Length = 93
Score = 72.0 bits (175), Expect = 1e-13
Identities = 35/84 (41%), Positives = 54/84 (64%), Gaps = 1/84 (1%)
Query: 7 ASAVLLASL-LSLHLGTATRGSDISKTCCFQYSHKPLPWTWVRSYEFTSNSCSQRAVIFT 65
A AVLL ++ L + +A +D CCF Y+ + +P ++ Y TS+ CS+ +VIF
Sbjct: 7 ALAVLLCTMALCNQVLSAPLAADTPTACCFSYTSRQIPQNFIADYFETSSQCSKPSVIFL 66
Query: 66 TKRGKKVCTHPRKKWVQKYISLLK 89
TKRG++VC P ++WVQKY+S L+
Sbjct: 67 TKRGRQVCADPSEEWVQKYVSDLE 90
>gi|93589094 chemokine (C-C motif) ligand 3-like 3 precursor [Homo
sapiens]
Length = 93
Score = 72.0 bits (175), Expect = 1e-13
Identities = 35/84 (41%), Positives = 54/84 (64%), Gaps = 1/84 (1%)
Query: 7 ASAVLLASL-LSLHLGTATRGSDISKTCCFQYSHKPLPWTWVRSYEFTSNSCSQRAVIFT 65
A AVLL ++ L + +A +D CCF Y+ + +P ++ Y TS+ CS+ +VIF
Sbjct: 7 ALAVLLCTMALCNQVLSAPLAADTPTACCFSYTSRQIPQNFIADYFETSSQCSKPSVIFL 66
Query: 66 TKRGKKVCTHPRKKWVQKYISLLK 89
TKRG++VC P ++WVQKY+S L+
Sbjct: 67 TKRGRQVCADPSEEWVQKYVSDLE 90
>gi|22538814 small inducible cytokine A5 precursor [Homo sapiens]
Length = 91
Score = 71.2 bits (173), Expect = 2e-13
Identities = 31/82 (37%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Query: 8 SAVLLASLLSLHLGTATRGSDISKTCCFQYSHKPLPWTWVRSYEFTSNSCSQRAVIFTTK 67
+ +L+A+ L + SD + CCF Y +PLP ++ Y +TS CS AV+F T+
Sbjct: 9 AVILIATALCAPASASPYSSDTTP-CCFAYIARPLPRAHIKEYFYTSGKCSNPAVVFVTR 67
Query: 68 RGKKVCTHPRKKWVQKYISLLK 89
+ ++VC +P KKWV++YI+ L+
Sbjct: 68 KNRQVCANPEKKWVREYINSLE 89
>gi|4506845 chemokine C-C motif ligand 4 isoform 1 precursor [Homo
sapiens]
Length = 92
Score = 70.5 bits (171), Expect = 3e-13
Identities = 36/80 (45%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Query: 6 LASAVLLASLLSLHLGTATRGSDISKTCCFQYSHKPLPWTWVRSYEFTSNSCSQRAVIFT 65
L+ +L+A+ S L +A GSD CCF Y+ + LP +V Y TS+ CSQ AV+F
Sbjct: 8 LSLLMLVAAFCSPAL-SAPMGSDPPTACCFSYTARKLPRNFVVDYYETSSLCSQPAVVFQ 66
Query: 66 TKRGKKVCTHPRKKWVQKYI 85
TKR K+VC P + WVQ+Y+
Sbjct: 67 TKRSKQVCADPSESWVQEYV 86
>gi|4885587 small inducible cytokine A13 precursor [Homo sapiens]
Length = 98
Score = 66.6 bits (161), Expect = 4e-12
Identities = 27/61 (44%), Positives = 41/61 (67%)
Query: 28 DISKTCCFQYSHKPLPWTWVRSYEFTSNSCSQRAVIFTTKRGKKVCTHPRKKWVQKYISL 87
++ TCCF +S K + ++SY T++ C Q+AVIF TK GK++C P++KWVQ Y+
Sbjct: 29 NVPSTCCFTFSSKKISLQRLKSYVITTSRCPQKAVIFRTKLGKEICADPKEKWVQNYMKH 88
Query: 88 L 88
L
Sbjct: 89 L 89
>gi|14589961 chemokine (C-C motif) ligand 14 isoform 1 precursor
[Homo sapiens]
Length = 93
Score = 65.9 bits (159), Expect = 7e-12
Identities = 36/92 (39%), Positives = 52/92 (56%), Gaps = 5/92 (5%)
Query: 2 MGLSLASAVLLASLLSLHLGTAT----RGSDISKTCCFQYSHKPLPWTWVRSYEFTSNSC 57
M +S+A A+ L+++ LGT T RG CCF Y+ +P + Y T++ C
Sbjct: 1 MKISVA-AIPFFLLITIALGTKTESSSRGPYHPSECCFTYTTYKIPRQRIMDYYETNSQC 59
Query: 58 SQRAVIFTTKRGKKVCTHPRKKWVQKYISLLK 89
S+ ++F TKRG VCT+P KWVQ YI +K
Sbjct: 60 SKPGIVFITKRGHSVCTNPSDKWVQDYIKDMK 91
>gi|4506831 small inducible cytokine A18 precursor [Homo sapiens]
Length = 89
Score = 64.7 bits (156), Expect = 2e-11
Identities = 31/82 (37%), Positives = 46/82 (56%)
Query: 8 SAVLLASLLSLHLGTATRGSDISKTCCFQYSHKPLPWTWVRSYEFTSNSCSQRAVIFTTK 67
+A LL + ++ L + + + CC Y+ +P ++ Y TS C + VI TK
Sbjct: 5 AAALLVLVCTMALCSCAQVGTNKELCCLVYTSWQIPQKFIVDYSETSPQCPKPGVILLTK 64
Query: 68 RGKKVCTHPRKKWVQKYISLLK 89
RG+++C P KKWVQKYIS LK
Sbjct: 65 RGRQICADPNKKWVQKYISDLK 86
>gi|14589959 chemokine (C-C motif) ligand 14 isoform 2 precursor
[Homo sapiens]
Length = 109
Score = 60.1 bits (144), Expect = 4e-10
Identities = 25/57 (43%), Positives = 35/57 (61%)
Query: 33 CCFQYSHKPLPWTWVRSYEFTSNSCSQRAVIFTTKRGKKVCTHPRKKWVQKYISLLK 89
CCF Y+ +P + Y T++ CS+ ++F TKRG VCT+P KWVQ YI +K
Sbjct: 51 CCFTYTTYKIPRQRIMDYYETNSQCSKPGIVFITKRGHSVCTNPSDKWVQDYIKDMK 107
>gi|4506827 small inducible cytokine A11 precursor [Homo sapiens]
Length = 97
Score = 58.9 bits (141), Expect = 8e-10
Identities = 29/71 (40%), Positives = 40/71 (56%), Gaps = 5/71 (7%)
Query: 27 SDISKTCCFQYSHKPLPWTWVRSYE-FTSNSCSQRAVIFTTKRGKKVCTHPRKKWVQKYI 85
+ + TCCF +++ +P + SY TS C Q+AVIF TK K +C P+KKWVQ +
Sbjct: 26 ASVPTTCCFNLANRKIPLQRLESYRRITSGKCPQKAVIFKTKLAKDICADPKKKWVQDSM 85
Query: 86 SLL----KTPK 92
L TPK
Sbjct: 86 KYLDQKSPTPK 96
>gi|4506829 small inducible cytokine A17 precursor [Homo sapiens]
Length = 94
Score = 58.9 bits (141), Expect = 8e-10
Identities = 27/87 (31%), Positives = 52/87 (59%), Gaps = 3/87 (3%)
Query: 4 LSLASAVLLASLLSLHLGTATRGSDISKTCCFQYSHKPLPWTWVRSYEFTSNSCSQRAVI 63
L+L + +L ASL +H A RG+++ + CC +Y +P ++++ TS CS+ A++
Sbjct: 7 LALVTLLLGASLQHIH---AARGTNVGRECCLEYFKGAIPLRKLKTWYQTSEDCSRDAIV 63
Query: 64 FTTKRGKKVCTHPRKKWVQKYISLLKT 90
F T +G+ +C+ P K V+ + L++
Sbjct: 64 FVTVQGRAICSDPNNKRVKNAVKYLQS 90
>gi|13435402 chemokine (C-C motif) ligand 7 precursor [Homo
sapiens]
Length = 99
Score = 58.9 bits (141), Expect = 8e-10
Identities = 38/96 (39%), Positives = 55/96 (57%), Gaps = 10/96 (10%)
Query: 7 ASAVLLASLLSLHL----GTATR-GSDISKTCCFQYSHKPLPWTWVRSYEFTSNS-CSQR 60
ASA LL LL+ G A G + S TCC+++ +K +P + SY T++S C +
Sbjct: 3 ASAALLCLLLTAAAFSPQGLAQPVGINTSTTCCYRFINKKIPKQRLESYRRTTSSHCPRE 62
Query: 61 AVIFTTKRGKKVCTHPRKKWVQKYISLL----KTPK 92
AVIF TK K++C P +KWVQ ++ L +TPK
Sbjct: 63 AVIFKTKLDKEICADPTQKWVQDFMKHLDKKTQTPK 98
>gi|4759074 small inducible cytokine A16 precursor [Homo sapiens]
Length = 120
Score = 55.8 bits (133), Expect = 7e-09
Identities = 31/82 (37%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Query: 4 LSLASAVLLASLLSLHLGTATRGSDISKTCCFQYSHKPLPWTWVRSYEFTSNSCSQRAVI 63
LSL +L+ + S + TCC +Y K LP V Y N C A+I
Sbjct: 8 LSLLVLILIITSASRSQPKVPEWVNTPSTCCLKYYEKVLPRRLVVGYRKALN-CHLPAII 66
Query: 64 FTTKRGKKVCTHPRKKWVQKYI 85
F TKR ++VCT+P WVQ+YI
Sbjct: 67 FVTKRNREVCTNPNDDWVQEYI 88
>gi|22165427 small inducible cytokine A24 precursor [Homo sapiens]
Length = 119
Score = 54.7 bits (130), Expect = 2e-08
Identities = 28/86 (32%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
Query: 4 LSLASAVLLASLLSLHLGTATRGSDISKTCCFQYSHKPLPWTWVRSYEFTSNS-CSQRAV 62
+++ +++L + + H+ T I CC + K +P V SY+ +S S C + V
Sbjct: 5 MTIVTSLLFLGVCAHHI-IPTGSVVIPSPCCMFFVSKRIPENRVVSYQLSSRSTCLKAGV 63
Query: 63 IFTTKRGKKVCTHPRKKWVQKYISLL 88
IFTTK+G++ C P+++WVQ+Y+ L
Sbjct: 64 IFTTKKGQQFCGDPKQEWVQRYMKNL 89
>gi|22538806 small inducible cytokine A23 isoform CKbeta8-1
precursor [Homo sapiens]
Length = 137
Score = 54.3 bits (129), Expect = 2e-08
Identities = 32/95 (33%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Query: 1 MMGLSLASAVLLASLLSLHLG---TATRGSDISKT---CCFQYSHKPLPWTWVRSYEFTS 54
M L L + VLL L +G T + + T CC Y+ + +P + + SY T+
Sbjct: 33 MSKLPLENPVLLDMLWRRKIGPQMTLSHAAGFHATSADCCISYTPRSIPCSLLESYFETN 92
Query: 55 NSCSQRAVIFTTKRGKKVCTHPRKKWVQKYISLLK 89
+ CS+ VIF TK+G++ C +P K VQ + +LK
Sbjct: 93 SECSKPGVIFLTKKGRRFCANPSDKQVQVCVRMLK 127
>gi|22538808 small inducible cytokine A23 isoform CKbeta8 precursor
[Homo sapiens]
Length = 120
Score = 53.9 bits (128), Expect = 3e-08
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 30 SKTCCFQYSHKPLPWTWVRSYEFTSNSCSQRAVIFTTKRGKKVCTHPRKKWVQKYISLLK 89
S CC Y+ + +P + + SY T++ CS+ VIF TK+G++ C +P K VQ + +LK
Sbjct: 51 SADCCISYTPRSIPCSLLESYFETNSECSKPGVIFLTKKGRRFCANPSDKQVQVCVRMLK 110
>gi|22538816 small inducible cytokine A8 precursor [Homo sapiens]
Length = 99
Score = 53.1 bits (126), Expect = 5e-08
Identities = 23/52 (44%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 32 TCCFQYSHKPLPWTWVRSY-EFTSNSCSQRAVIFTTKRGKKVCTHPRKKWVQ 82
TCCF ++ +P + SY T+ C + AVIF TKRGK+VC P+++WV+
Sbjct: 33 TCCFNVINRKIPIQRLESYTRITNIQCPKEAVIFKTKRGKEVCADPKERWVR 84
>gi|5454040 small inducible cytokine A19 precursor [Homo sapiens]
Length = 98
Score = 53.1 bits (126), Expect = 5e-08
Identities = 31/86 (36%), Positives = 50/86 (58%), Gaps = 5/86 (5%)
Query: 9 AVLLA-SLLSLHLGTATR--GSDISKTCCFQYSHKPLPWTWVRSYEFT--SNSCSQRAVI 63
A+LLA SLL L A G++ ++ CC + KP+P VR++ + + C AV+
Sbjct: 2 ALLLALSLLVLWTSPAPTLSGTNDAEDCCLSVTQKPIPGYIVRNFHYLLIKDGCRVPAVV 61
Query: 64 FTTKRGKKVCTHPRKKWVQKYISLLK 89
FTT RG+++C P + WV++ I L+
Sbjct: 62 FTTLRGRQLCAPPDQPWVERIIQRLQ 87
>gi|14602449 chemokine (C-C motif) ligand 15 precursor [Homo
sapiens]
Length = 113
Score = 52.0 bits (123), Expect = 1e-07
Identities = 28/83 (33%), Positives = 41/83 (49%)
Query: 7 ASAVLLASLLSLHLGTATRGSDISKTCCFQYSHKPLPWTWVRSYEFTSNSCSQRAVIFTT 66
A L+ S L L + CC Y + +P + ++SY TS+ CS+ VIF T
Sbjct: 27 AETELMMSKLPLENPVVLNSFHFAADCCTSYISQSIPCSLMKSYFETSSECSKPGVIFLT 86
Query: 67 KRGKKVCTHPRKKWVQKYISLLK 89
K+G++VC P VQ + LK
Sbjct: 87 KKGRQVCAKPSGPGVQDCMKKLK 109
>gi|4506833 small inducible cytokine A1 precursor [Homo sapiens]
Length = 96
Score = 49.3 bits (116), Expect = 7e-07
Identities = 20/57 (35%), Positives = 32/57 (56%)
Query: 33 CCFQYSHKPLPWTWVRSYEFTSNSCSQRAVIFTTKRGKKVCTHPRKKWVQKYISLLK 89
CCF ++ + +P + Y TS+ CS +IF KRGK+ C WVQ++ +L+
Sbjct: 33 CCFSFAEQEIPLRAILCYRNTSSICSNEGLIFKLKRGKEACALDTVGWVQRHRKMLR 89
>gi|4506841 small inducible cytokine A2 precursor [Homo sapiens]
Length = 99
Score = 48.5 bits (114), Expect = 1e-06
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 5/66 (7%)
Query: 32 TCCFQYSHKPLPWTWVRSYE-FTSNSCSQRAVIFTTKRGKKVCTHPRKKWVQKYISLL-- 88
TCC+ ++++ + + SY TS+ C + AVIF T K++C P++KWVQ + L
Sbjct: 33 TCCYNFTNRKISVQRLASYRRITSSKCPKEAVIFKTIVAKEICADPKQKWVQDSMDHLDK 92
Query: 89 --KTPK 92
+TPK
Sbjct: 93 QTQTPK 98
>gi|4506853 chemokine (C motif) ligand 1 [Homo sapiens]
Length = 114
Score = 46.6 bits (109), Expect = 4e-06
Identities = 25/61 (40%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 26 GSDIS-KTCCFQYSHKPLPWTWVRSYEFTSNSCSQRAVIFTTKRGKKVCTHPRKKWVQKY 84
GS++S K C + + LP + +++Y T S RAVIF TKRG KVC P+ WV+
Sbjct: 23 GSEVSDKRTCVSLTTQRLPVSRIKTYTITEGSL--RAVIFITKRGLKVCADPQATWVRDV 80
Query: 85 I 85
+
Sbjct: 81 V 81
>gi|22538804 small inducible cytokine A22 precursor [Homo sapiens]
Length = 93
Score = 45.4 bits (106), Expect = 1e-05
Identities = 20/56 (35%), Positives = 31/56 (55%)
Query: 33 CCFQYSHKPLPWTWVRSYEFTSNSCSQRAVIFTTKRGKKVCTHPRKKWVQKYISLL 88
CC Y LP V+ + +TS+SC + V+ T R K++C PR WV+ ++ L
Sbjct: 36 CCRDYVRYRLPLRVVKHFYWTSDSCPRPGVVLLTFRDKEICADPRVPWVKMILNKL 91
>gi|4506855 chemokine (C motif) ligand 2 [Homo sapiens]
Length = 114
Score = 45.4 bits (106), Expect = 1e-05
Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 26 GSDIS-KTCCFQYSHKPLPWTWVRSYEFTSNSCSQRAVIFTTKRGKKVCTHPRKKWVQKY 84
GS++S + C + + LP + +++Y T S RAVIF TKRG KVC P+ WV+
Sbjct: 23 GSEVSHRRTCVSLTTQRLPVSRIKTYTITEGSL--RAVIFITKRGLKVCADPQATWVRDV 80
Query: 85 I 85
+
Sbjct: 81 V 81
>gi|4506835 small inducible cytokine A21 precursor [Homo sapiens]
Length = 134
Score = 44.7 bits (104), Expect = 2e-05
Identities = 35/97 (36%), Positives = 55/97 (56%), Gaps = 10/97 (10%)
Query: 2 MGLSLASAVLLASLLSLHLGTA-TRGSDI-SKTCCFQYSHKPLPWTWVRSY--EFTSNSC 57
M SLA ++L+ L L G T+GSD ++ CC +YS + +P VRSY + S C
Sbjct: 1 MAQSLALSLLI---LVLAFGIPRTQGSDGGAQDCCLKYSQRKIPAKVVRSYRKQEPSLGC 57
Query: 58 SQRAVIFTTKRGK--KVCTHPRKKWVQKYISLL-KTP 91
S A++F ++ ++C P++ WVQ+ + L KTP
Sbjct: 58 SIPAILFLPRKRSQAELCADPKELWVQQLMQHLDKTP 94
>gi|22538796 small inducible cytokine A25 precursor [Homo sapiens]
Length = 150
Score = 44.3 bits (103), Expect = 2e-05
Identities = 30/87 (34%), Positives = 43/87 (49%), Gaps = 10/87 (11%)
Query: 11 LLASLLSLHLGT---ATRGSDISKTCCFQYSHKPLPWT-----WVRSYEFTSNSCSQRAV 62
LLA L++ LG A + + CC Y H P+ W W + S SC+ A
Sbjct: 5 LLACLVAGFLGAWAPAVHTQGVFEDCCLAY-HYPIGWAVLRRAWTYRIQEVSGSCNLPAA 63
Query: 63 IF-TTKRGKKVCTHPRKKWVQKYISLL 88
IF KR +KVC +P+ + VQ+ + LL
Sbjct: 64 IFYLPKRHRKVCGNPKSREVQRAMKLL 90
>gi|194239688 chemokine (C-C motif) ligand 20 isoform 2 [Homo
sapiens]
Length = 95
Score = 43.9 bits (102), Expect = 3e-05
Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 7/85 (8%)
Query: 9 AVLLASLLS---LHLGTATRGSDISKTCCFQYSHKPLPWTWVRSY--EFTSNSCSQRAVI 63
++LLA+L+S LHL + S+ CC Y+ + L ++ + + + C A+I
Sbjct: 6 SLLLAALMSVLLLHLCGESEASNFD--CCLGYTDRILHPKFIVGFTRQLANEGCDINAII 63
Query: 64 FTTKRGKKVCTHPRKKWVQKYISLL 88
F TK+ VC +P++ WV+ + LL
Sbjct: 64 FHTKKKLSVCANPKQTWVKYIVRLL 88
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.130 0.415
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,429,536
Number of Sequences: 37866
Number of extensions: 118884
Number of successful extensions: 313
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 256
Number of HSP's gapped (non-prelim): 55
length of query: 94
length of database: 18,247,518
effective HSP length: 65
effective length of query: 29
effective length of database: 15,786,228
effective search space: 457800612
effective search space used: 457800612
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.