Search of human proteins with 5032137

Search of human proteins with 5032137

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|5032137 vesicle-associated membrane protein 7 isoform 1
[Homo sapiens]
         (220 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|5032137 vesicle-associated membrane protein 7 isoform 1 [Homo...   439   e-123
gi|223468574 vesicle-associated membrane protein 7 isoform 2 [Ho...   333   9e-92
gi|14043026 vesicle-associated membrane protein 8 [Homo sapiens]       74   7e-14
gi|42544207 vesicle-associated membrane protein 4 [Homo sapiens]       64   1e-10
gi|94429050 SEC22 vesicle trafficking protein homolog B [Homo sa...    63   2e-10
gi|172072620 vesicle-associated membrane protein 2 (synaptobrevi...    58   7e-09
gi|5730120 YKT6 v-SNARE protein [Homo sapiens]                         57   2e-08
gi|4759300 vesicle-associated membrane protein 3 [Homo sapiens]        54   8e-08
gi|5730112 vesicle-associated membrane protein 5 [Homo sapiens]        52   4e-07
gi|40549446 vesicle-associated membrane protein 1 isoform 2 [Hom...    50   2e-06
gi|7657673 vesicle-associated membrane protein 1 isoform 1 [Homo...    48   6e-06
gi|9257251 vesicle-associated membrane protein 1 isoform 3 [Homo...    48   6e-06
gi|14591919 SEC22 vesicle trafficking protein homolog A [Homo sa...    41   0.001
gi|194353966 dynein, axonemal, heavy polypeptide 6 [Homo sapiens]      32   0.33 
gi|226528395 short coiled-coil protein isoform 2 [Homo sapiens]        31   0.73 
gi|226528371 short coiled-coil protein isoform 5 [Homo sapiens]        31   0.73 
gi|62865604 tripartite motif protein 31 [Homo sapiens]                 30   1.6  
gi|4506431 RAS p21 protein activator 1 isoform 1 [Homo sapiens]        30   1.6  
gi|12545406 RAS p21 protein activator 1 isoform 2 [Homo sapiens]       30   1.6  
gi|239755970 PREDICTED: FLJ46358 protein [Homo sapiens]                29   3.6  
gi|239750493 PREDICTED: FLJ46358 protein [Homo sapiens]                29   3.6  
gi|239744790 PREDICTED: hypothetical protein LOC400110 [Homo sap...    29   3.6  
gi|221316624 dystonin isoform 4 [Homo sapiens]                         28   6.1  
gi|221316622 dystonin isoform 3 [Homo sapiens]                         28   6.1  
gi|221316618 dystonin isoform 2 [Homo sapiens]                         28   6.1  
gi|34577047 dystonin isoform 1 [Homo sapiens]                          28   6.1  
gi|34577049 dystonin isoform 1eA precursor [Homo sapiens]              28   6.1  
gi|223555935 dynein, axonemal, heavy polypeptide 14 isoform 1 [H...    28   8.0  
gi|21426793 amisyn [Homo sapiens]                                      28   8.0  

>gi|5032137 vesicle-associated membrane protein 7 isoform 1 [Homo
           sapiens]
          Length = 220

 Score =  439 bits (1128), Expect = e-123
 Identities = 220/220 (100%), Positives = 220/220 (100%)

Query: 1   MAILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYSHGNYLFHYICQDRI 60
           MAILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYSHGNYLFHYICQDRI
Sbjct: 1   MAILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYSHGNYLFHYICQDRI 60

Query: 61  VYLCITDDDFERSRAFNFLNEIKKRFQTTYGSRAQTALPYAMNSEFSSVLAAQLKHHSEN 120
           VYLCITDDDFERSRAFNFLNEIKKRFQTTYGSRAQTALPYAMNSEFSSVLAAQLKHHSEN
Sbjct: 61  VYLCITDDDFERSRAFNFLNEIKKRFQTTYGSRAQTALPYAMNSEFSSVLAAQLKHHSEN 120

Query: 121 KGLDKVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLAR 180
           KGLDKVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLAR
Sbjct: 121 KGLDKVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLAR 180

Query: 181 AMCMKNLKLTIIIIIVSIVFIYIIVSPLCGGFTWPSCVKK 220
           AMCMKNLKLTIIIIIVSIVFIYIIVSPLCGGFTWPSCVKK
Sbjct: 181 AMCMKNLKLTIIIIIVSIVFIYIIVSPLCGGFTWPSCVKK 220


>gi|223468574 vesicle-associated membrane protein 7 isoform 2 [Homo
           sapiens]
          Length = 179

 Score =  333 bits (853), Expect = 9e-92
 Identities = 179/220 (81%), Positives = 179/220 (81%), Gaps = 41/220 (18%)

Query: 1   MAILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYSHGNYLFHYICQDRI 60
           MAILFAVVARGTTILAKHAWCGGNFLE                                 
Sbjct: 1   MAILFAVVARGTTILAKHAWCGGNFLE--------------------------------- 27

Query: 61  VYLCITDDDFERSRAFNFLNEIKKRFQTTYGSRAQTALPYAMNSEFSSVLAAQLKHHSEN 120
                   DFERSRAFNFLNEIKKRFQTTYGSRAQTALPYAMNSEFSSVLAAQLKHHSEN
Sbjct: 28  --------DFERSRAFNFLNEIKKRFQTTYGSRAQTALPYAMNSEFSSVLAAQLKHHSEN 79

Query: 121 KGLDKVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLAR 180
           KGLDKVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLAR
Sbjct: 80  KGLDKVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLAR 139

Query: 181 AMCMKNLKLTIIIIIVSIVFIYIIVSPLCGGFTWPSCVKK 220
           AMCMKNLKLTIIIIIVSIVFIYIIVSPLCGGFTWPSCVKK
Sbjct: 140 AMCMKNLKLTIIIIIVSIVFIYIIVSPLCGGFTWPSCVKK 179


>gi|14043026 vesicle-associated membrane protein 8 [Homo sapiens]
          Length = 100

 Score = 74.3 bits (181), Expect = 7e-14
 Identities = 38/100 (38%), Positives = 62/100 (62%)

Query: 114 LKHHSENKGLDKVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKT 173
           ++  SE  G D+V   Q++V+ +K IM +N++ +  RGE LE L +KTE+L  +S  FKT
Sbjct: 1   MEEASEGGGNDRVRNLQSEVEGVKNIMTQNVERILARGENLEHLRNKTEDLEATSEHFKT 60

Query: 174 TSRNLARAMCMKNLKLTIIIIIVSIVFIYIIVSPLCGGFT 213
           TS+ +AR    KN+K+ ++I ++  + I  IV    G F+
Sbjct: 61  TSQKVARKFWWKNVKMIVLICVIVFIIILFIVLFATGAFS 100


>gi|42544207 vesicle-associated membrane protein 4 [Homo sapiens]
          Length = 141

 Score = 63.9 bits (154), Expect = 1e-10
 Identities = 31/82 (37%), Positives = 50/82 (60%)

Query: 124 DKVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLARAMC 183
           DK+   Q QVDE+  +M  NI  V +RGERL+ L DK+E+L D++  F   S+ L R M 
Sbjct: 51  DKIKHVQNQVDEVIDVMQENITKVIERGERLDELQDKSESLSDNATAFSNRSKQLRRQMW 110

Query: 184 MKNLKLTIIIIIVSIVFIYIIV 205
            +  K+  I+ +V+ + + +I+
Sbjct: 111 WRGCKIKAIMALVAAILLLVII 132


>gi|94429050 SEC22 vesicle trafficking protein homolog B [Homo
           sapiens]
          Length = 215

 Score = 62.8 bits (151), Expect = 2e-10
 Identities = 42/174 (24%), Positives = 81/174 (46%), Gaps = 3/174 (1%)

Query: 30  EQILAKIPSEN-NKLTYSHGNYLFHYICQDRIVYLCITDDDFERSRAFNFLNEIKKRFQT 88
           +Q+  K+  ++  + T   G   FHYI +  +  L + +  F ++ AF +L ++   F  
Sbjct: 38  KQLFRKLNEQSPTRCTLEAGAMTFHYIIEQGVCDLVLCEAAFPKTLAFAYLEDLHSEFDE 97

Query: 89  TYGSRAQT-ALPYAMNSEFSSVLAAQLKHHSENKGLDKVMETQAQVDELKGIMVRNIDLV 147
            +G +  T + PY+   EF + +    K + ++     +     ++ +++ IMV NI+ V
Sbjct: 98  QHGKKVPTVSRPYSF-IEFDTFIQKTKKLYIDSCARRNLGSINTELQDVQRIMVANIEEV 156

Query: 148 AQRGERLELLIDKTENLVDSSVTFKTTSRNLARAMCMKNLKLTIIIIIVSIVFI 201
            QRGE L  L  K  NL   S  ++  ++ L        L    +  I+ IV++
Sbjct: 157 LQRGEALSALDSKANNLSSLSKKYRQDAKYLNMHSTYAKLAAVAVFFIMLIVYV 210


>gi|172072620 vesicle-associated membrane protein 2 (synaptobrevin
           2) [Homo sapiens]
          Length = 116

 Score = 57.8 bits (138), Expect = 7e-09
 Identities = 33/82 (40%), Positives = 52/82 (63%), Gaps = 1/82 (1%)

Query: 125 KVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLARAMCM 184
           ++ +TQAQVDE+  IM  N+D V +R ++L  L D+ + L   +  F+T++  L R    
Sbjct: 31  RLQQTQAQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKRKYWW 90

Query: 185 KNLKLTIII-IIVSIVFIYIIV 205
           KNLK+ II+ +I +I+ I IIV
Sbjct: 91  KNLKMMIILGVICAIILIIIIV 112


>gi|5730120 YKT6 v-SNARE protein [Homo sapiens]
          Length = 198

 Score = 56.6 bits (135), Expect = 2e-08
 Identities = 38/156 (24%), Positives = 75/156 (48%), Gaps = 9/156 (5%)

Query: 25  FLEVTEQILAKIPSENNKLTYSHGNYLFH-YICQDRIVYLCITDDDFERSRAFNFLNEIK 83
           F+  T Q++ +  S+  + +    +YL H Y+  D +  + I D+++    AF  L ++ 
Sbjct: 39  FMTFTSQLIVERSSKGTRASVKEQDYLCHVYVRNDSLAGVVIADNEYPSRVAFTLLEKVL 98

Query: 84  KRFQTTYGSRAQTALPYAMNSEFS---SVLAAQLKHHSENKGLDKVMETQAQVDELKGIM 140
             F     S+    + + + S  +     L   L  +   +  D + + QA++DE K I+
Sbjct: 99  DEF-----SKQVDRIDWPVGSPATIHYPALDGHLSRYQNPREADPMTKVQAELDETKIIL 153

Query: 141 VRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSR 176
              ++ + +RGE+L+ L+ K+E L   S  F  T+R
Sbjct: 154 HNTMESLLERGEKLDDLVSKSEVLGTQSKAFYKTAR 189


>gi|4759300 vesicle-associated membrane protein 3 [Homo sapiens]
          Length = 100

 Score = 54.3 bits (129), Expect = 8e-08
 Identities = 30/81 (37%), Positives = 48/81 (59%)

Query: 125 KVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLARAMCM 184
           ++ +TQ QVDE+  IM  N+D V +R ++L  L D+ + L   +  F+T++  L R    
Sbjct: 14  RLQQTQNQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKRKYWW 73

Query: 185 KNLKLTIIIIIVSIVFIYIIV 205
           KN K+  I I V ++FI II+
Sbjct: 74  KNCKMWAIGITVLVIFIIIII 94


>gi|5730112 vesicle-associated membrane protein 5 [Homo sapiens]
          Length = 116

 Score = 52.0 bits (123), Expect = 4e-07
 Identities = 27/78 (34%), Positives = 47/78 (60%), Gaps = 2/78 (2%)

Query: 130 QAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLARAMCMKNLKL 189
           Q Q +E+  IM  N   V +RG +L  L  +++ L+D S TF  T++NLA+  C +N++ 
Sbjct: 10  QQQANEVTEIMRNNFGKVLERGVKLAELQQRSDQLLDMSSTFNKTTQNLAQKKCWENIRY 69

Query: 190 TIII--IIVSIVFIYIIV 205
            I +  ++V ++ I +IV
Sbjct: 70  RICVGLVVVGVLLIILIV 87


>gi|40549446 vesicle-associated membrane protein 1 isoform 2 [Homo
           sapiens]
          Length = 117

 Score = 49.7 bits (117), Expect = 2e-06
 Identities = 25/82 (30%), Positives = 49/82 (59%)

Query: 125 KVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLARAMCM 184
           ++ +TQAQV+E+  I+  N+D V +R ++L  L D+ + L   +  F++++  L R    
Sbjct: 33  RLQQTQAQVEEVVDIIRVNVDKVLERDQKLSELDDRADALQAGASQFESSAAKLKRKYWW 92

Query: 185 KNLKLTIIIIIVSIVFIYIIVS 206
           KN K+ I++  +  + + +IVS
Sbjct: 93  KNCKMMIMLGAICAIIVVVIVS 114


>gi|7657673 vesicle-associated membrane protein 1 isoform 1 [Homo
           sapiens]
          Length = 118

 Score = 48.1 bits (113), Expect = 6e-06
 Identities = 24/81 (29%), Positives = 48/81 (59%)

Query: 125 KVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLARAMCM 184
           ++ +TQAQV+E+  I+  N+D V +R ++L  L D+ + L   +  F++++  L R    
Sbjct: 33  RLQQTQAQVEEVVDIIRVNVDKVLERDQKLSELDDRADALQAGASQFESSAAKLKRKYWW 92

Query: 185 KNLKLTIIIIIVSIVFIYIIV 205
           KN K+ I++  +  + + +IV
Sbjct: 93  KNCKMMIMLGAICAIIVVVIV 113


>gi|9257251 vesicle-associated membrane protein 1 isoform 3 [Homo
           sapiens]
          Length = 116

 Score = 48.1 bits (113), Expect = 6e-06
 Identities = 24/81 (29%), Positives = 48/81 (59%)

Query: 125 KVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLARAMCM 184
           ++ +TQAQV+E+  I+  N+D V +R ++L  L D+ + L   +  F++++  L R    
Sbjct: 33  RLQQTQAQVEEVVDIIRVNVDKVLERDQKLSELDDRADALQAGASQFESSAAKLKRKYWW 92

Query: 185 KNLKLTIIIIIVSIVFIYIIV 205
           KN K+ I++  +  + + +IV
Sbjct: 93  KNCKMMIMLGAICAIIVVVIV 113


>gi|14591919 SEC22 vesicle trafficking protein homolog A [Homo
           sapiens]
          Length = 307

 Score = 40.8 bits (94), Expect = 0.001
 Identities = 27/115 (23%), Positives = 58/115 (50%), Gaps = 6/115 (5%)

Query: 25  FLEVTEQILAKIPSENNKLTYSHGNYLFHYICQDRIVYLCITDDDFERSRAFNFLNEIKK 84
           + ++  + LA++P   ++ T   G+Y  ++I    + Y+ +  +++    AF+FL+E++K
Sbjct: 36  YFKMLSRKLAQLP---DRCTLKTGHYNINFISSLGVSYMMLCTENYPNVLAFSFLDELQK 92

Query: 85  RFQTTYG-SRAQTAL-PYAMNSEFSSVLAAQLKHHSENKGLDKVMETQAQVDELK 137
            F TTY   +  TA+ PY    EF + +    + ++  + L   +       E+K
Sbjct: 93  EFITTYNMMKTNTAVRPYCF-IEFDNFIQRTKQRYNNPRSLSTKINLSDMQTEIK 146


>gi|194353966 dynein, axonemal, heavy polypeptide 6 [Homo sapiens]
          Length = 4158

 Score = 32.3 bits (72), Expect = 0.33
 Identities = 28/143 (19%), Positives = 65/143 (45%), Gaps = 18/143 (12%)

Query: 20   WCGGNFLEVTEQILAKIPSENNKLTYSHGNYLFHYICQDRIVYLCITDDDFERSRAFNFL 79
            W     L V++   +++ + N +L             ++++  +C+       S A  + 
Sbjct: 2607 WPREALLSVSKTFFSQVDAGNEEL-------------KEKLPLMCVNVHLSVSSMAERYY 2653

Query: 80   NEIKKRFQTTYGSRAQTALPY--AMNSEFSSVLAAQLKHHSENKGLDKVMETQAQVDELK 137
            NE+++R+ TT  S  +    Y   ++ +   +++A+        GL K++ET   VD++K
Sbjct: 2654 NELRRRYYTTPTSYLELINLYLSMLSEKRKQIISAR---DRVKNGLTKLLETNILVDKMK 2710

Query: 138  GIMVRNIDLVAQRGERLELLIDK 160
              +     ++  + E +E L++K
Sbjct: 2711 LDLSALEPVLLAKSEDVEALMEK 2733


>gi|226528395 short coiled-coil protein isoform 2 [Homo sapiens]
          Length = 158

 Score = 31.2 bits (69), Expect = 0.73
 Identities = 22/92 (23%), Positives = 45/92 (48%), Gaps = 8/92 (8%)

Query: 93  RAQTALPYAMNSEFSSVLAAQLKHHSENKGLDKVMETQAQVDELKGIMVRNIDLVAQRGE 152
           R ++ LP  MN++       Q++   + + +++V+E Q  +++L       +D V +   
Sbjct: 70  RPKSLLPKMMNADMDVDAENQVELEEKTRLINQVLELQHTLEDLSA----RVDAVKEENL 125

Query: 153 RL----ELLIDKTENLVDSSVTFKTTSRNLAR 180
           +L    ++L    ENL+ +S  F+TT     R
Sbjct: 126 KLKSENQVLGQYIENLMSASSVFQTTDTKSKR 157


>gi|226528371 short coiled-coil protein isoform 5 [Homo sapiens]
          Length = 121

 Score = 31.2 bits (69), Expect = 0.73
 Identities = 22/92 (23%), Positives = 45/92 (48%), Gaps = 8/92 (8%)

Query: 93  RAQTALPYAMNSEFSSVLAAQLKHHSENKGLDKVMETQAQVDELKGIMVRNIDLVAQRGE 152
           R ++ LP  MN++       Q++   + + +++V+E Q  +++L       +D V +   
Sbjct: 33  RPKSLLPKMMNADMDVDAENQVELEEKTRLINQVLELQHTLEDLSA----RVDAVKEENL 88

Query: 153 RL----ELLIDKTENLVDSSVTFKTTSRNLAR 180
           +L    ++L    ENL+ +S  F+TT     R
Sbjct: 89  KLKSENQVLGQYIENLMSASSVFQTTDTKSKR 120


>gi|62865604 tripartite motif protein 31 [Homo sapiens]
          Length = 425

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 34/187 (18%), Positives = 73/187 (39%), Gaps = 24/187 (12%)

Query: 24  NFLEVTEQILA-KIPSENNKLTYSHGNYLFHYICQDRIVYLCITDDDFE----------R 72
           N +E  + + A ++ S+  + T      +FHY C+D   +LC    + +           
Sbjct: 73  NLVEKIQALQASEVQSKRKEATCPRHQEMFHYFCEDDGKFLCFVCRESKDHKSHNVSLIE 132

Query: 73  SRAFNFLNEIKKRFQTTYGSRAQTALPYAMNSEFSSVLAAQLKHHSENKGLDKVMETQAQ 132
             A N+  +I+++ Q       +T    A       V   Q++H  + + L +       
Sbjct: 133 EAAQNYQGQIQEQIQVLQQKEKETVQVKAQGVHRVDVFTDQVEHEKQ-RILTEFELLHQV 191

Query: 133 VDELKGIMVRNIDLVAQRGER--------LELLIDKTENLVDSSVTFKTTSRNLARAMCM 184
           ++E K  ++  I  +   G           E  ++  + LVDS      T +N+     +
Sbjct: 192 LEEEKNFLLSRIYWLGHEGTEAGKHYVASTEPQLNDLKKLVDS----LKTKQNMPPRQLL 247

Query: 185 KNLKLTI 191
           +++K+ +
Sbjct: 248 EDIKVVL 254


>gi|4506431 RAS p21 protein activator 1 isoform 1 [Homo sapiens]
          Length = 1047

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 31/137 (22%), Positives = 53/137 (38%), Gaps = 8/137 (5%)

Query: 47  HGNYLFHYIC-QDRIVYLCITDDDFERSRAFNFL------NEIKKRFQTTYGSRAQTALP 99
           H  Y   ++C QDR +   I    F   +  + L       EI    + T   RA T L 
Sbjct: 736 HVVYALSHVCGQDRTLLASILLRIFLHEKLESLLLCTLNDREISMEDEATTLFRA-TTLA 794

Query: 100 YAMNSEFSSVLAAQLKHHSENKGLDKVMETQAQVDELKGIMVRNIDLVAQRGERLELLID 159
             +  ++    A Q  HH+    + K+ME++   +     + +N D+       L +L +
Sbjct: 795 STLMEQYMKATATQFVHHALKDSILKIMESKQSCELSPSKLEKNEDVNTNLTHLLNILSE 854

Query: 160 KTENLVDSSVTFKTTSR 176
             E +  +S     T R
Sbjct: 855 LVEKIFMASEILPPTLR 871


>gi|12545406 RAS p21 protein activator 1 isoform 2 [Homo sapiens]
          Length = 870

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 31/137 (22%), Positives = 53/137 (38%), Gaps = 8/137 (5%)

Query: 47  HGNYLFHYIC-QDRIVYLCITDDDFERSRAFNFL------NEIKKRFQTTYGSRAQTALP 99
           H  Y   ++C QDR +   I    F   +  + L       EI    + T   RA T L 
Sbjct: 559 HVVYALSHVCGQDRTLLASILLRIFLHEKLESLLLCTLNDREISMEDEATTLFRA-TTLA 617

Query: 100 YAMNSEFSSVLAAQLKHHSENKGLDKVMETQAQVDELKGIMVRNIDLVAQRGERLELLID 159
             +  ++    A Q  HH+    + K+ME++   +     + +N D+       L +L +
Sbjct: 618 STLMEQYMKATATQFVHHALKDSILKIMESKQSCELSPSKLEKNEDVNTNLTHLLNILSE 677

Query: 160 KTENLVDSSVTFKTTSR 176
             E +  +S     T R
Sbjct: 678 LVEKIFMASEILPPTLR 694


>gi|239755970 PREDICTED: FLJ46358 protein [Homo sapiens]
          Length = 227

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 14/33 (42%), Positives = 20/33 (60%)

Query: 94  AQTALPYAMNSEFSSVLAAQLKHHSENKGLDKV 126
           + TAL YA+ SE +S+    L H +  + LDKV
Sbjct: 195 SNTALQYAVYSESTSLAKKLLSHDANTEALDKV 227


>gi|239750493 PREDICTED: FLJ46358 protein [Homo sapiens]
          Length = 227

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 14/33 (42%), Positives = 20/33 (60%)

Query: 94  AQTALPYAMNSEFSSVLAAQLKHHSENKGLDKV 126
           + TAL YA+ SE +S+    L H +  + LDKV
Sbjct: 195 SNTALQYAVYSESTSLAKKLLSHDANTEALDKV 227


>gi|239744790 PREDICTED: hypothetical protein LOC400110 [Homo
           sapiens]
          Length = 227

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 14/33 (42%), Positives = 20/33 (60%)

Query: 94  AQTALPYAMNSEFSSVLAAQLKHHSENKGLDKV 126
           + TAL YA+ SE +S+    L H +  + LDKV
Sbjct: 195 SNTALQYAVYSESTSLAKKLLSHDANTEALDKV 227


>gi|221316624 dystonin isoform 4 [Homo sapiens]
          Length = 5526

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 27/111 (24%), Positives = 46/111 (41%), Gaps = 15/111 (13%)

Query: 63   LCITDDDFERSRAFNFLNEIKKRFQTTYGSRAQTALPYAMNSEFSSVLAAQLKHHSENKG 122
            + +  D   R  + N +NE  K+F  T      ++L   M    +    A  KH      
Sbjct: 2144 IMLEQDIAGRQSSINAMNEKVKKFMETTDPSTASSLQAKMKDLSARFSEASHKH------ 2197

Query: 123  LDKVMETQAQVDELKGIMVRNIDLVAQRGERLELLID-KTENLVDSSVTFK 172
                 ET A+++ELK      ++L     E+L+  ++ KT+ L +  V  K
Sbjct: 2198 ----KETLAKMEELK----TKVELFENLSEKLQTFLETKTQALTEVDVPGK 2240


>gi|221316622 dystonin isoform 3 [Homo sapiens]
          Length = 5537

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 27/111 (24%), Positives = 46/111 (41%), Gaps = 15/111 (13%)

Query: 63   LCITDDDFERSRAFNFLNEIKKRFQTTYGSRAQTALPYAMNSEFSSVLAAQLKHHSENKG 122
            + +  D   R  + N +NE  K+F  T      ++L   M    +    A  KH      
Sbjct: 2155 IMLEQDIAGRQSSINAMNEKVKKFMETTDPSTASSLQAKMKDLSARFSEASHKH------ 2208

Query: 123  LDKVMETQAQVDELKGIMVRNIDLVAQRGERLELLID-KTENLVDSSVTFK 172
                 ET A+++ELK      ++L     E+L+  ++ KT+ L +  V  K
Sbjct: 2209 ----KETLAKMEELK----TKVELFENLSEKLQTFLETKTQALTEVDVPGK 2251


>gi|221316618 dystonin isoform 2 [Homo sapiens]
          Length = 5675

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 27/111 (24%), Positives = 46/111 (41%), Gaps = 15/111 (13%)

Query: 63   LCITDDDFERSRAFNFLNEIKKRFQTTYGSRAQTALPYAMNSEFSSVLAAQLKHHSENKG 122
            + +  D   R  + N +NE  K+F  T      ++L   M    +    A  KH      
Sbjct: 2293 IMLEQDIAGRQSSINAMNEKVKKFMETTDPSTASSLQAKMKDLSARFSEASHKH------ 2346

Query: 123  LDKVMETQAQVDELKGIMVRNIDLVAQRGERLELLID-KTENLVDSSVTFK 172
                 ET A+++ELK      ++L     E+L+  ++ KT+ L +  V  K
Sbjct: 2347 ----KETLAKMEELK----TKVELFENLSEKLQTFLETKTQALTEVDVPGK 2389


>gi|34577047 dystonin isoform 1 [Homo sapiens]
          Length = 5497

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 27/111 (24%), Positives = 46/111 (41%), Gaps = 15/111 (13%)

Query: 63   LCITDDDFERSRAFNFLNEIKKRFQTTYGSRAQTALPYAMNSEFSSVLAAQLKHHSENKG 122
            + +  D   R  + N +NE  K+F  T      ++L   M    +    A  KH      
Sbjct: 2115 IMLEQDIAGRQSSINAMNEKVKKFMETTDPSTASSLQAKMKDLSARFSEASHKH------ 2168

Query: 123  LDKVMETQAQVDELKGIMVRNIDLVAQRGERLELLID-KTENLVDSSVTFK 172
                 ET A+++ELK      ++L     E+L+  ++ KT+ L +  V  K
Sbjct: 2169 ----KETLAKMEELK----TKVELFENLSEKLQTFLETKTQALTEVDVPGK 2211


>gi|34577049 dystonin isoform 1eA precursor [Homo sapiens]
          Length = 5171

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 27/111 (24%), Positives = 46/111 (41%), Gaps = 15/111 (13%)

Query: 63   LCITDDDFERSRAFNFLNEIKKRFQTTYGSRAQTALPYAMNSEFSSVLAAQLKHHSENKG 122
            + +  D   R  + N +NE  K+F  T      ++L   M    +    A  KH      
Sbjct: 1789 IMLEQDIAGRQSSINAMNEKVKKFMETTDPSTASSLQAKMKDLSARFSEASHKH------ 1842

Query: 123  LDKVMETQAQVDELKGIMVRNIDLVAQRGERLELLID-KTENLVDSSVTFK 172
                 ET A+++ELK      ++L     E+L+  ++ KT+ L +  V  K
Sbjct: 1843 ----KETLAKMEELK----TKVELFENLSEKLQTFLETKTQALTEVDVPGK 1885


>gi|223555935 dynein, axonemal, heavy polypeptide 14 isoform 1 [Homo
            sapiens]
          Length = 4515

 Score = 27.7 bits (60), Expect = 8.0
 Identities = 11/24 (45%), Positives = 17/24 (70%)

Query: 7    VVARGTTILAKHAWCGGNFLEVTE 30
            ++ RGT++L      GGNFL++TE
Sbjct: 2279 LIQRGTSLLTNLQRSGGNFLKITE 2302


>gi|21426793 amisyn [Homo sapiens]
          Length = 210

 Score = 27.7 bits (60), Expect = 8.0
 Identities = 14/31 (45%), Positives = 20/31 (64%)

Query: 149 QRGERLELLIDKTENLVDSSVTFKTTSRNLA 179
           +RGERL    +KTE+L +S+  F  T+  LA
Sbjct: 175 ERGERLGRAEEKTEDLKNSAQQFAETAHKLA 205


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.324    0.136    0.399 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,777,648
Number of Sequences: 37866
Number of extensions: 242304
Number of successful extensions: 921
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 899
Number of HSP's gapped (non-prelim): 30
length of query: 220
length of database: 18,247,518
effective HSP length: 98
effective length of query: 122
effective length of database: 14,536,650
effective search space: 1773471300
effective search space used: 1773471300
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.