Guide to the Human Genome
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Name: C21orf2 Sequence: fasta or formatted (256aa) NCBI GI: 4826651
Description:

hypothetical protein LOC755

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.4         19           2
 C cysteine            2.7          7           2
 D aspartate           2.7          7           1
 E glutamate          10.5         27           3
 F phenylalanine       0.8          2           1
 G glycine             6.2         16           2
 H histidine           2.0          5           1
 I isoleucine          2.7          7           1
 K lysine              3.1          8           1
 L leucine            15.2         39           4
 M methionine          1.6          4           1
 N asparagine          2.3          6           1
 P proline             5.1         13           2
 Q glutamine           3.9         10           2
 R arginine           10.2         26           2
 S serine             10.5         27           3
 T threonine           6.2         16           1
 V valine              4.7         12           1
 W tryptophan          0.8          2           1
 Y tyrosine            1.2          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC755 
LRRC23                0.079   leucine rich repeat containing 23 isoform a 
LRRC23                0.079   leucine rich repeat containing 23 isoform a 
LRRC6                 0.067   leucine rich repeat containing 6 
CEP72                 0.065   centrosomal protein 72 kDa 
LRGUK                 0.063   leucine-rich repeats and guanylate kinase domain con...
LGR6                  0.061   leucine-rich repeat-containing G protein-coupled rec...
LGR6                  0.061   leucine-rich repeat-containing G protein-coupled rec...
LGR6                  0.061   leucine-rich repeat-containing G protein-coupled rec...
LRRC56                0.056   leucine rich repeat containing 56 
LRRC36                0.050   leucine rich repeat containing 36 isoform 1 
LRTOMT                0.050   leucine rich transmembrane and 0-methyltransferase d...
CEP110                0.050   centrosomal protein 110kDa 
LGR5                  0.046   leucine-rich repeat-containing G protein-coupled rece...
LRRC46                0.044   leucine rich repeat containing 46 
LRRC61                0.044   leucine rich repeat containing 61 
LRRC61                0.044   leucine rich repeat containing 61 
LGR4                  0.042   leucine-rich repeat-containing G protein-coupled re...
LRRC50                0.042   leucine rich repeat containing 50 
LOC100129335          0.040   PREDICTED: Leucine-rich repeat-containing protein E...
LOC100129335          0.040   PREDICTED: Leucine-rich repeat-containing protein E...
LOC100129335          0.040   PREDICTED: Leucine-rich repeat-containing protein E...
LOC100129335          0.040   PREDICTED: Leucine-rich repeat-containing protein E...
PPP1R7                0.040   protein phosphatase 1, regulatory subunit 7 
LRRC48                0.038   leucine rich repeat containing 48 isoform b 
LRRC48                0.038   leucine rich repeat containing 48 isoform b 
LRRC48                0.038   leucine rich repeat containing 48 isoform a 
LRRC48                0.038   leucine rich repeat containing 48 isoform a 
C10orf11              0.038   chromosome 10 open reading frame 11 
RABGGTA               0.036   Rab geranylgeranyltransferase alpha 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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