Guide to the Human Genome
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Name: TXNL1 Sequence: fasta or formatted (289aa) NCBI GI: 4759274
Description:

thioredoxin-like 1

Referenced in:

Glutathione Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.2         15           2
 C cysteine            2.4          7           1
 D aspartate           6.9         20           2
 E glutamate           7.6         22           3
 F phenylalanine       6.6         19           2
 G glycine             7.3         21           1
 H histidine           1.4          4           1
 I isoleucine          4.8         14           1
 K lysine              6.2         18           2
 L leucine             6.2         18           2
 M methionine          2.8          8           1
 N asparagine          5.9         17           2
 P proline             5.9         17           1
 Q glutamine           5.5         16           1
 R arginine            3.8         11           1
 S serine              5.9         17           2
 T threonine           5.9         17           2
 V valine              7.3         21           2
 W tryptophan          0.0          0           0
 Y tyrosine            2.4          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   thioredoxin-like 1 
TXN                   0.108   thioredoxin 
TXNDC2                0.086   thioredoxin domain-containing 2 isoform 1 
TXNDC2                0.086   thioredoxin domain-containing 2 isoform 2 
TXNDC2                0.086   thioredoxin domain-containing 2 isoform 1 
TXNDC8                0.071   thioredoxin domain containing 8 
C1orf128              0.062   chromosome 1 open reading frame 128 
GLRX3                 0.060   glutaredoxin 3 
TXNDC5                0.041   thioredoxin domain containing 5 isoform 1 precursor ...
TXNDC5                0.041   thioredoxin domain containing 5 isoform 3 
TXN2                  0.032   thioredoxin 2 precursor 
PDIA3                 0.026   protein disulfide-isomerase A3 precursor 
TXNDC3                0.019   thioredoxin domain containing 3 
TXNDC15               0.014   disulfide isomerase 
ACO2                  0.012   aconitase 2, mitochondrial precursor 
ERP44                 0.011   thioredoxin domain containing 4 (endoplasmic reticul...
PDIA2                 0.011   protein disulfide isomerase A2 
DNAJC10               0.009   DnaJ (Hsp40) homolog, subfamily C, member 10 
CTNS                  0.009   cystinosis, nephropathic isoform 2 
CTNS                  0.009   cystinosis, nephropathic isoform 1 
P4HB                  0.009   prolyl 4-hydroxylase, beta subunit precursor 
IFT52                 0.009   intraflagellar transport 52 homolog 
PDIA4                 0.009   protein disulfide isomerase A4 
PDIA6                 0.007   protein disulfide isomerase A6 
QSOX1                 0.007   quiescin Q6 sulfhydryl oxidase 1 isoform b 
QSOX1                 0.007   quiescin Q6 sulfhydryl oxidase 1 isoform a 
IPO7                  0.005   importin 7 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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