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Search of human proteins with 4758406
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4758406 fucosyltransferase 7 [Homo sapiens]
(342 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4758406 fucosyltransferase 7 [Homo sapiens] 724 0.0
gi|4503811 fucosyltransferase 4 [Homo sapiens] 271 5e-73
gi|52485799 fucosyltransferase 5 [Homo sapiens] 270 1e-72
gi|103472033 fucosyltransferase 6 [Homo sapiens] 265 4e-71
gi|4503815 fucosyltransferase 6 [Homo sapiens] 265 4e-71
gi|148277014 fucosyltransferase 3 [Homo sapiens] 265 6e-71
gi|148277012 fucosyltransferase 3 [Homo sapiens] 265 6e-71
gi|148277010 fucosyltransferase 3 [Homo sapiens] 265 6e-71
gi|4503809 fucosyltransferase 3 [Homo sapiens] 265 6e-71
gi|139394626 fucosyltransferase 9 (alpha (1,3) fucosyltransferas... 237 1e-62
gi|145580617 fucosyltransferase 11 (alpha (1,3) fucosyltransfera... 77 2e-14
gi|40805106 fucosyltransferase 10 [Homo sapiens] 77 3e-14
gi|169173184 PREDICTED: hypothetical protein [Homo sapiens] 34 0.22
gi|219842266 usherin isoform B [Homo sapiens] 30 2.4
gi|167614488 TBC1 domain family, member 10B [Homo sapiens] 30 3.1
gi|25914749 ATP-binding cassette, sub-family C, member 10 [Homo ... 30 4.1
gi|74272287 matrix metalloproteinase 9 preproprotein [Homo sapiens] 29 7.0
gi|148368962 NKF3 kinase family member [Homo sapiens] 28 9.1
gi|189217874 neurensin 1 [Homo sapiens] 28 9.1
>gi|4758406 fucosyltransferase 7 [Homo sapiens]
Length = 342
Score = 724 bits (1869), Expect = 0.0
Identities = 342/342 (100%), Positives = 342/342 (100%)
Query: 1 MNNAGHGPTRRLRGLGVLAGVALLAALWLLWLLGSAPRGTPAPQPTITILVWHWPFTDQP 60
MNNAGHGPTRRLRGLGVLAGVALLAALWLLWLLGSAPRGTPAPQPTITILVWHWPFTDQP
Sbjct: 1 MNNAGHGPTRRLRGLGVLAGVALLAALWLLWLLGSAPRGTPAPQPTITILVWHWPFTDQP 60
Query: 61 PELPSDTCTRYGIARCHLSANRSLLASADAVVFHHRELQTRRSHLPLAQRPRGQPWVWAS 120
PELPSDTCTRYGIARCHLSANRSLLASADAVVFHHRELQTRRSHLPLAQRPRGQPWVWAS
Sbjct: 61 PELPSDTCTRYGIARCHLSANRSLLASADAVVFHHRELQTRRSHLPLAQRPRGQPWVWAS 120
Query: 121 MESPSHTHGLSHLRGIFNWVLSYRRDSDIFVPYGRLEPHWGPSPPLPAKSRVAAWVVSNF 180
MESPSHTHGLSHLRGIFNWVLSYRRDSDIFVPYGRLEPHWGPSPPLPAKSRVAAWVVSNF
Sbjct: 121 MESPSHTHGLSHLRGIFNWVLSYRRDSDIFVPYGRLEPHWGPSPPLPAKSRVAAWVVSNF 180
Query: 181 QERQLRARLYRQLAPHLRVDVFGRANGRPLCASCLVPTVAQYRFYLSFENSQHRDYITEK 240
QERQLRARLYRQLAPHLRVDVFGRANGRPLCASCLVPTVAQYRFYLSFENSQHRDYITEK
Sbjct: 181 QERQLRARLYRQLAPHLRVDVFGRANGRPLCASCLVPTVAQYRFYLSFENSQHRDYITEK 240
Query: 241 FWRNALVAGTVPVVLGPPRATYEAFVPADAFVHVDDFGSARELAAFLTGMNESRYQRFFA 300
FWRNALVAGTVPVVLGPPRATYEAFVPADAFVHVDDFGSARELAAFLTGMNESRYQRFFA
Sbjct: 241 FWRNALVAGTVPVVLGPPRATYEAFVPADAFVHVDDFGSARELAAFLTGMNESRYQRFFA 300
Query: 301 WRDRLRVRLFTDWRERFCAICDRYPHLPRSQVYEDLEGWFQA 342
WRDRLRVRLFTDWRERFCAICDRYPHLPRSQVYEDLEGWFQA
Sbjct: 301 WRDRLRVRLFTDWRERFCAICDRYPHLPRSQVYEDLEGWFQA 342
>gi|4503811 fucosyltransferase 4 [Homo sapiens]
Length = 530
Score = 271 bits (694), Expect = 5e-73
Identities = 162/386 (41%), Positives = 206/386 (53%), Gaps = 54/386 (13%)
Query: 10 RRLRGLG----VLAGVALLAALWLLWL----LGSAPRGTPAPQPTITILVWHWPF--TDQ 59
RR RGL VLA L + + L P +P P + +L+W PF D
Sbjct: 144 RRGRGLPWTVCVLAAAGLTCTALITYACWGQLPPLPWASPTPSRPVGVLLWWEPFGGRDS 203
Query: 60 PPELPSDTCTRYGIARCHLSANRSLLASADAVVFHHRELQTRRSHLP------------- 106
P P D R+ I+ C L +R+ A AV+FHHR+L P
Sbjct: 204 APRPPPDCRLRFNISGCRLLTDRASYGEAQAVLFHHRDLVKGPPDWPPPWGIQAHTAEEV 263
Query: 107 -------------------LAQRPRGQPWVWASMESPSHTHGLSHLRG-IFNWVLSYRRD 146
+ RP GQ WVW + ESPSH+ GL L +FNW LSYR D
Sbjct: 264 DLRVLDYEEAAAAAEALATSSPRPPGQRWVWMNFESPSHSPGLRSLASNLFNWTLSYRAD 323
Query: 147 SDIFVPYGRLEPHWGP-------SPPLPAKSRVAAWVVSNFQERQLRARLYRQLAPHLRV 199
SD+FVPYG L P P +PPL K + AWVVS++ ERQ R R Y QL+ H+ V
Sbjct: 324 SDVFVPYGYLYPRSHPGDPPSGLAPPLSRKQGLVAWVVSHWDERQARVRYYHQLSQHVTV 383
Query: 200 DVFGRAN-GRPLCASCLVPTVAQYRFYLSFENSQHRDYITEKFWRNALVAGTVPVVLGPP 258
DVFGR G+P+ L+ TVA+Y+FYL+FENSQH DYITEK WRNAL+AG VPVVLGP
Sbjct: 384 DVFGRGGPGQPVPEIGLLHTVARYKFYLAFENSQHLDYITEKLWRNALLAGAVPVVLGPD 443
Query: 259 RATYEAFVPADAFVHVDDFGSARELAAFLTGM--NESRYQRFFAWRDRLRVRLFTDWRER 316
RA YE FVP AF+HVDDF SA LA++L + N + Y+R+F WR V + + W E
Sbjct: 444 RANYERFVPRGAFIHVDDFPSASSLASYLLFLDRNPAVYRRYFHWRRSYAVHITSFWDEP 503
Query: 317 FCAICDRYPHL-PRSQVYEDLEGWFQ 341
+C +C R + +L WF+
Sbjct: 504 WCRVCQAVQRAGDRPKSIRNLASWFE 529
>gi|52485799 fucosyltransferase 5 [Homo sapiens]
Length = 374
Score = 270 bits (691), Expect = 1e-72
Identities = 146/308 (47%), Positives = 196/308 (63%), Gaps = 11/308 (3%)
Query: 40 TPAPQPTITILVWHWPFTDQPPELPSDTCTRYGIARCHLSANRSLLASADAVVFHHRELQ 99
TPA PT+ IL+W WPF + P LP + G A C+++A+ S+ ADAV+ HH ++
Sbjct: 70 TPA-HPTLLILLWTWPF-NTPVALPRCSEMVPGAADCNITADSSVYPQADAVIVHHWDIM 127
Query: 100 TRRS-HLPLAQRPRGQPWVWASMESPSHTHGLSHLRGIFNWVLSYRRDSDIFVPYGRLEP 158
S +LP RP+GQ W+W SMESPS+ L L G FN +SYR DSDIF PYG LEP
Sbjct: 128 YNPSANLPPPTRPQGQRWIWFSMESPSNCRHLEALDGYFNLTMSYRSDSDIFTPYGWLEP 187
Query: 159 HWG-PSPP---LPAKSRVAAWVVSNFQERQLRARLYRQLAPHLRVDVFGRANGRPLCASC 214
G P+ P L AK+ + AW VSN++ R R Y+ L HL+VDV+GR++ +PL
Sbjct: 188 WSGQPAHPPLNLSAKTELVAWAVSNWKPDSARVRYYQSLQAHLKVDVYGRSH-KPLPKGT 246
Query: 215 LVPTVAQYRFYLSFENSQHRDYITEKFWRNALVAGTVPVVLGPPRATYEAFVPADAFVHV 274
++ T+++Y+FYL+FENS H DYITEK WRNAL A VPVVLGP R+ YE F+P DAF+HV
Sbjct: 247 MMETLSRYKFYLAFENSLHPDYITEKLWRNALEAWAVPVVLGPSRSNYERFLPPDAFIHV 306
Query: 275 DDFGSARELAAFLTGMNE--SRYQRFFAWRDRLRVRLFTDWRERFCAICDRYPHLPRSQV 332
DDF S ++LA +L +++ +RY +F WR+ LR R F+ W FC C + R Q
Sbjct: 307 DDFQSPKDLARYLQELDKDHARYLSYFHWRETLRPRSFS-WALAFCKACWKLQQESRYQT 365
Query: 333 YEDLEGWF 340
+ WF
Sbjct: 366 VRSIAAWF 373
>gi|103472033 fucosyltransferase 6 [Homo sapiens]
Length = 359
Score = 265 bits (677), Expect = 4e-71
Identities = 146/309 (47%), Positives = 195/309 (63%), Gaps = 12/309 (3%)
Query: 39 GTPAPQPTITILVWHWPFTDQPPELPSDTCTRYGIARCHLSANRSLLASADAVVFHHREL 98
GTPA + IL+W WPF ++P LP + G A C+++A+R + ADAV+ HHRE+
Sbjct: 55 GTPAHSIPL-ILLWTWPF-NKPIALPRCSEMVPGTADCNITADRKVYPQADAVIVHHREV 112
Query: 99 QTRRS-HLPLAQRPRGQPWVWASMESPSHTHGLSHLRGIFNWVLSYRRDSDIFVPYGRLE 157
S LP + R +GQ W+W SMESPSH L + G FN +SYR DSDIF PYG LE
Sbjct: 113 MYNPSAQLPRSPRRQGQRWIWFSMESPSHCWQLKAMDGYFNLTMSYRSDSDIFTPYGWLE 172
Query: 158 PHWG-PSPP---LPAKSRVAAWVVSNFQERQLRARLYRQLAPHLRVDVFGRANGRPLCAS 213
P G P+ P L AK+ + AW VSN+ R R Y+ L HL+VDV+GR++ +PL
Sbjct: 173 PWSGQPAHPPLNLSAKTELVAWAVSNWGPNSARVRYYQSLQAHLKVDVYGRSH-KPLPQG 231
Query: 214 CLVPTVAQYRFYLSFENSQHRDYITEKFWRNALVAGTVPVVLGPPRATYEAFVPADAFVH 273
++ T+++Y+FYL+FENS H DYITEK WRNAL A VPVVLGP R+ YE F+P DAF+H
Sbjct: 232 TMMETLSRYKFYLAFENSLHPDYITEKLWRNALEAWAVPVVLGPSRSNYERFLPPDAFIH 291
Query: 274 VDDFGSARELAAFLTGMNE--SRYQRFFAWRDRLRVRLFTDWRERFCAICDRYPHLPRSQ 331
VDDF S ++LA +L +++ +RY +F WR+ LR R F+ W FC C + R Q
Sbjct: 292 VDDFQSPKDLARYLQELDKDHARYLSYFRWRETLRPRSFS-WALAFCKACWKLQEESRYQ 350
Query: 332 VYEDLEGWF 340
+ WF
Sbjct: 351 T-RGIAAWF 358
>gi|4503815 fucosyltransferase 6 [Homo sapiens]
Length = 359
Score = 265 bits (677), Expect = 4e-71
Identities = 146/309 (47%), Positives = 195/309 (63%), Gaps = 12/309 (3%)
Query: 39 GTPAPQPTITILVWHWPFTDQPPELPSDTCTRYGIARCHLSANRSLLASADAVVFHHREL 98
GTPA + IL+W WPF ++P LP + G A C+++A+R + ADAV+ HHRE+
Sbjct: 55 GTPAHSIPL-ILLWTWPF-NKPIALPRCSEMVPGTADCNITADRKVYPQADAVIVHHREV 112
Query: 99 QTRRS-HLPLAQRPRGQPWVWASMESPSHTHGLSHLRGIFNWVLSYRRDSDIFVPYGRLE 157
S LP + R +GQ W+W SMESPSH L + G FN +SYR DSDIF PYG LE
Sbjct: 113 MYNPSAQLPRSPRRQGQRWIWFSMESPSHCWQLKAMDGYFNLTMSYRSDSDIFTPYGWLE 172
Query: 158 PHWG-PSPP---LPAKSRVAAWVVSNFQERQLRARLYRQLAPHLRVDVFGRANGRPLCAS 213
P G P+ P L AK+ + AW VSN+ R R Y+ L HL+VDV+GR++ +PL
Sbjct: 173 PWSGQPAHPPLNLSAKTELVAWAVSNWGPNSARVRYYQSLQAHLKVDVYGRSH-KPLPQG 231
Query: 214 CLVPTVAQYRFYLSFENSQHRDYITEKFWRNALVAGTVPVVLGPPRATYEAFVPADAFVH 273
++ T+++Y+FYL+FENS H DYITEK WRNAL A VPVVLGP R+ YE F+P DAF+H
Sbjct: 232 TMMETLSRYKFYLAFENSLHPDYITEKLWRNALEAWAVPVVLGPSRSNYERFLPPDAFIH 291
Query: 274 VDDFGSARELAAFLTGMNE--SRYQRFFAWRDRLRVRLFTDWRERFCAICDRYPHLPRSQ 331
VDDF S ++LA +L +++ +RY +F WR+ LR R F+ W FC C + R Q
Sbjct: 292 VDDFQSPKDLARYLQELDKDHARYLSYFRWRETLRPRSFS-WALAFCKACWKLQEESRYQ 350
Query: 332 VYEDLEGWF 340
+ WF
Sbjct: 351 T-RGIAAWF 358
>gi|148277014 fucosyltransferase 3 [Homo sapiens]
Length = 361
Score = 265 bits (676), Expect = 6e-71
Identities = 140/314 (44%), Positives = 195/314 (62%), Gaps = 10/314 (3%)
Query: 34 GSAPRGTPAPQPTITILVWHWPFTDQPPELPSDTCTRYGIARCHLSANRSLLASADAVVF 93
GS+ + T +PT+ IL+W WPF P L + G A CH++A+R + AD V+
Sbjct: 50 GSSRQDTTPTRPTLLILLWTWPF-HIPVALSRCSEMVPGTADCHITADRKVYPQADTVIV 108
Query: 94 HHRELQTR-RSHLPLAQRPRGQPWVWASMESPSHTHGLSHLRGIFNWVLSYRRDSDIFVP 152
HH ++ + +S LP + RP+GQ W+W ++E P + L L FN +SYR DSDIF P
Sbjct: 109 HHWDIMSNPKSRLPPSPRPQGQRWIWFNLEPPPNCQHLEALDRYFNLTMSYRSDSDIFTP 168
Query: 153 YGRLEPHWG-PSPP---LPAKSRVAAWVVSNFQERQLRARLYRQLAPHLRVDVFGRANGR 208
YG LEP G P+ P L AK+ + AW VSN++ R R Y+ L HL+VDV+GR++ +
Sbjct: 169 YGWLEPWSGQPAHPPLNLSAKTELVAWAVSNWKPDSARVRYYQSLQAHLKVDVYGRSH-K 227
Query: 209 PLCASCLVPTVAQYRFYLSFENSQHRDYITEKFWRNALVAGTVPVVLGPPRATYEAFVPA 268
PL ++ T+++Y+FYL+FENS H DYITEK WRNAL A VPVVLGP R+ YE F+P
Sbjct: 228 PLPKGTMMETLSRYKFYLAFENSLHPDYITEKLWRNALEAWAVPVVLGPSRSNYERFLPP 287
Query: 269 DAFVHVDDFGSARELAAFLTGMNE--SRYQRFFAWRDRLRVRLFTDWRERFCAICDRYPH 326
DAF+HVDDF S ++LA +L +++ +RY +F WR+ LR R F+ W FC C +
Sbjct: 288 DAFIHVDDFQSPKDLARYLQELDKDHARYLSYFRWRETLRPRSFS-WALDFCKACWKLQQ 346
Query: 327 LPRSQVYEDLEGWF 340
R Q + WF
Sbjct: 347 ESRYQTVRSIAAWF 360
>gi|148277012 fucosyltransferase 3 [Homo sapiens]
Length = 361
Score = 265 bits (676), Expect = 6e-71
Identities = 140/314 (44%), Positives = 195/314 (62%), Gaps = 10/314 (3%)
Query: 34 GSAPRGTPAPQPTITILVWHWPFTDQPPELPSDTCTRYGIARCHLSANRSLLASADAVVF 93
GS+ + T +PT+ IL+W WPF P L + G A CH++A+R + AD V+
Sbjct: 50 GSSRQDTTPTRPTLLILLWTWPF-HIPVALSRCSEMVPGTADCHITADRKVYPQADTVIV 108
Query: 94 HHRELQTR-RSHLPLAQRPRGQPWVWASMESPSHTHGLSHLRGIFNWVLSYRRDSDIFVP 152
HH ++ + +S LP + RP+GQ W+W ++E P + L L FN +SYR DSDIF P
Sbjct: 109 HHWDIMSNPKSRLPPSPRPQGQRWIWFNLEPPPNCQHLEALDRYFNLTMSYRSDSDIFTP 168
Query: 153 YGRLEPHWG-PSPP---LPAKSRVAAWVVSNFQERQLRARLYRQLAPHLRVDVFGRANGR 208
YG LEP G P+ P L AK+ + AW VSN++ R R Y+ L HL+VDV+GR++ +
Sbjct: 169 YGWLEPWSGQPAHPPLNLSAKTELVAWAVSNWKPDSARVRYYQSLQAHLKVDVYGRSH-K 227
Query: 209 PLCASCLVPTVAQYRFYLSFENSQHRDYITEKFWRNALVAGTVPVVLGPPRATYEAFVPA 268
PL ++ T+++Y+FYL+FENS H DYITEK WRNAL A VPVVLGP R+ YE F+P
Sbjct: 228 PLPKGTMMETLSRYKFYLAFENSLHPDYITEKLWRNALEAWAVPVVLGPSRSNYERFLPP 287
Query: 269 DAFVHVDDFGSARELAAFLTGMNE--SRYQRFFAWRDRLRVRLFTDWRERFCAICDRYPH 326
DAF+HVDDF S ++LA +L +++ +RY +F WR+ LR R F+ W FC C +
Sbjct: 288 DAFIHVDDFQSPKDLARYLQELDKDHARYLSYFRWRETLRPRSFS-WALDFCKACWKLQQ 346
Query: 327 LPRSQVYEDLEGWF 340
R Q + WF
Sbjct: 347 ESRYQTVRSIAAWF 360
>gi|148277010 fucosyltransferase 3 [Homo sapiens]
Length = 361
Score = 265 bits (676), Expect = 6e-71
Identities = 140/314 (44%), Positives = 195/314 (62%), Gaps = 10/314 (3%)
Query: 34 GSAPRGTPAPQPTITILVWHWPFTDQPPELPSDTCTRYGIARCHLSANRSLLASADAVVF 93
GS+ + T +PT+ IL+W WPF P L + G A CH++A+R + AD V+
Sbjct: 50 GSSRQDTTPTRPTLLILLWTWPF-HIPVALSRCSEMVPGTADCHITADRKVYPQADTVIV 108
Query: 94 HHRELQTR-RSHLPLAQRPRGQPWVWASMESPSHTHGLSHLRGIFNWVLSYRRDSDIFVP 152
HH ++ + +S LP + RP+GQ W+W ++E P + L L FN +SYR DSDIF P
Sbjct: 109 HHWDIMSNPKSRLPPSPRPQGQRWIWFNLEPPPNCQHLEALDRYFNLTMSYRSDSDIFTP 168
Query: 153 YGRLEPHWG-PSPP---LPAKSRVAAWVVSNFQERQLRARLYRQLAPHLRVDVFGRANGR 208
YG LEP G P+ P L AK+ + AW VSN++ R R Y+ L HL+VDV+GR++ +
Sbjct: 169 YGWLEPWSGQPAHPPLNLSAKTELVAWAVSNWKPDSARVRYYQSLQAHLKVDVYGRSH-K 227
Query: 209 PLCASCLVPTVAQYRFYLSFENSQHRDYITEKFWRNALVAGTVPVVLGPPRATYEAFVPA 268
PL ++ T+++Y+FYL+FENS H DYITEK WRNAL A VPVVLGP R+ YE F+P
Sbjct: 228 PLPKGTMMETLSRYKFYLAFENSLHPDYITEKLWRNALEAWAVPVVLGPSRSNYERFLPP 287
Query: 269 DAFVHVDDFGSARELAAFLTGMNE--SRYQRFFAWRDRLRVRLFTDWRERFCAICDRYPH 326
DAF+HVDDF S ++LA +L +++ +RY +F WR+ LR R F+ W FC C +
Sbjct: 288 DAFIHVDDFQSPKDLARYLQELDKDHARYLSYFRWRETLRPRSFS-WALDFCKACWKLQQ 346
Query: 327 LPRSQVYEDLEGWF 340
R Q + WF
Sbjct: 347 ESRYQTVRSIAAWF 360
>gi|4503809 fucosyltransferase 3 [Homo sapiens]
Length = 361
Score = 265 bits (676), Expect = 6e-71
Identities = 140/314 (44%), Positives = 195/314 (62%), Gaps = 10/314 (3%)
Query: 34 GSAPRGTPAPQPTITILVWHWPFTDQPPELPSDTCTRYGIARCHLSANRSLLASADAVVF 93
GS+ + T +PT+ IL+W WPF P L + G A CH++A+R + AD V+
Sbjct: 50 GSSRQDTTPTRPTLLILLWTWPF-HIPVALSRCSEMVPGTADCHITADRKVYPQADTVIV 108
Query: 94 HHRELQTR-RSHLPLAQRPRGQPWVWASMESPSHTHGLSHLRGIFNWVLSYRRDSDIFVP 152
HH ++ + +S LP + RP+GQ W+W ++E P + L L FN +SYR DSDIF P
Sbjct: 109 HHWDIMSNPKSRLPPSPRPQGQRWIWFNLEPPPNCQHLEALDRYFNLTMSYRSDSDIFTP 168
Query: 153 YGRLEPHWG-PSPP---LPAKSRVAAWVVSNFQERQLRARLYRQLAPHLRVDVFGRANGR 208
YG LEP G P+ P L AK+ + AW VSN++ R R Y+ L HL+VDV+GR++ +
Sbjct: 169 YGWLEPWSGQPAHPPLNLSAKTELVAWAVSNWKPDSARVRYYQSLQAHLKVDVYGRSH-K 227
Query: 209 PLCASCLVPTVAQYRFYLSFENSQHRDYITEKFWRNALVAGTVPVVLGPPRATYEAFVPA 268
PL ++ T+++Y+FYL+FENS H DYITEK WRNAL A VPVVLGP R+ YE F+P
Sbjct: 228 PLPKGTMMETLSRYKFYLAFENSLHPDYITEKLWRNALEAWAVPVVLGPSRSNYERFLPP 287
Query: 269 DAFVHVDDFGSARELAAFLTGMNE--SRYQRFFAWRDRLRVRLFTDWRERFCAICDRYPH 326
DAF+HVDDF S ++LA +L +++ +RY +F WR+ LR R F+ W FC C +
Sbjct: 288 DAFIHVDDFQSPKDLARYLQELDKDHARYLSYFRWRETLRPRSFS-WALDFCKACWKLQQ 346
Query: 327 LPRSQVYEDLEGWF 340
R Q + WF
Sbjct: 347 ESRYQTVRSIAAWF 360
>gi|139394626 fucosyltransferase 9 (alpha (1,3) fucosyltransferase)
[Homo sapiens]
Length = 359
Score = 237 bits (604), Expect = 1e-62
Identities = 128/299 (42%), Positives = 177/299 (59%), Gaps = 12/299 (4%)
Query: 48 TILVWHWPFTDQPPELPSDTCTRYGIARCHLSANRSLLASADAVVFHHRELQTRRSHLPL 107
TILVW WPF Q +L S + I CHL+ +RSL + AV+ HHR++ ++LP
Sbjct: 65 TILVWVWPF-GQTFDLTSCQAM-FNIQGCHLTTDRSLYNKSHAVLIHHRDISWDLTNLPQ 122
Query: 108 AQRPRGQPWVWASMESPSHTHGLSHLRGIFNWVLSYRRDSDIFVPYGRLEPHWGPSP-PL 166
RP Q W+W ++ESP+HT S + +FN L+YRRDSDI VPYG L P +
Sbjct: 123 QARPPFQKWIWMNLESPTHTPQKSGIEHLFNLTLTYRRDSDIQVPYGFLTVSTNPFVFEV 182
Query: 167 PAKSRVAAWVVSNFQERQLRARLYRQLAPHLRVDVFGRANGRPLCASCLVPTVAQYRFYL 226
P+K ++ WVVSN+ R + Y +L+ + + +G+A G + L+PT++ +FYL
Sbjct: 183 PSKEKLVCWVVSNWNPEHARVKYYNELSKSIEIHTYGQAFGEYVNDKNLIPTISTCKFYL 242
Query: 227 SFENSQHRDYITEKFWRNALVAGTVPVVLGPPRATYEAFVPADAFVHVDDFGSARELAAF 286
SFENS H+DYITEK + NA +AG+VPVVLGP R YE ++PAD+F+HV+D+ S ELA +
Sbjct: 243 SFENSIHKDYITEKLY-NAFLAGSVPVVLGPSRENYENYIPADSFIHVEDYNSPSELAKY 301
Query: 287 L--TGMNESRYQRFFAWRDRLRVRLFTDWRERFCAICDRYPHLPRSQVYE---DLEGWF 340
L N Y +F WR V L W C CD H+ R Q Y+ +LE WF
Sbjct: 302 LKEVDKNNKLYLSYFNWRKDFTVNLPRFWESHACLACD---HVKRHQEYKSVGNLEKWF 357
>gi|145580617 fucosyltransferase 11 (alpha (1,3) fucosyltransferase)
[Homo sapiens]
Length = 492
Score = 77.4 bits (189), Expect = 2e-14
Identities = 85/306 (27%), Positives = 132/306 (43%), Gaps = 56/306 (18%)
Query: 39 GTPAP----QPTITILVWHWP--FTDQPPELPSDTCTRYGIARCHLSANRSLLASAD--A 90
GTP P + +L+W P F P + C R C S NR L + A
Sbjct: 63 GTPRPGREEAGDLPVLLWWSPGLFPHFPGDSERIECAR---GACVASRNRRALRDSRTRA 119
Query: 91 VVFHHRELQTRRSHLPLAQRPRGQPWVWASMESPSHTHGLSHLRGI--FNWVLSYRRDSD 148
++F+ + + + LP R Q W ESP + LSH GI FN ++ R SD
Sbjct: 120 LLFYGTDFRASAAPLP---RLAHQSWALLHEESPLNNFLLSHGPGIRLFNLTSTFSRHSD 176
Query: 149 IFVPYGRLEPHWGPSP-----PLPAKSRVAAW----------VVSNFQERQLRARLYRQL 193
L W P P+P A W + S+ R R R+L
Sbjct: 177 Y-----PLSLQWLPGTAYLRRPVPPPMERAEWRRRGYAPLLYLQSHCDVPADRDRYVREL 231
Query: 194 APHLRVDVFGRA-NGRPLCASCLVPT-------------VAQYRFYLSFENSQHRDYITE 239
H+ VD +G+ R L + L T +++Y+F+L+ EN+ DY+TE
Sbjct: 232 MRHIPVDSYGKCLQNRELPTARLQDTATATTEDPELLAFLSRYKFHLALENAICNDYMTE 291
Query: 240 KFWRNALVAGTVPVVLGPPRATYEAFVPAD-AFVHVDDFGSARELAAFLTGM--NESRYQ 296
K WR + G VPV G P + ++P + + + +DDF S ++LA F+ + N+ Y
Sbjct: 292 KLWR-PMHLGAVPVYRGSP--SVRDWMPNNHSVILIDDFESPQKLAEFIDFLDKNDEEYM 348
Query: 297 RFFAWR 302
++ A++
Sbjct: 349 KYLAYK 354
>gi|40805106 fucosyltransferase 10 [Homo sapiens]
Length = 479
Score = 76.6 bits (187), Expect = 3e-14
Identities = 80/304 (26%), Positives = 131/304 (43%), Gaps = 39/304 (12%)
Query: 49 ILVWHWPFTDQPPELPSDTCTRYGIARCHLSANRSLLASADAVVFHHRELQTRRSHLPLA 108
I++W P T + L + G C + NR+ L F LPL
Sbjct: 83 IMLWWSPLTGETGRLG-----QCGADACFFTINRTYLHHHMTKAFLFYGTDFNIDSLPLP 137
Query: 109 QRPRGQPWVWASMESPSHTHGLSH--LRGIFNWVLSYRRDSDIFVPYGRLEP-----HWG 161
++ W ESP + + L H + +FN+ ++ R S + + LE
Sbjct: 138 RKAH-HDWAVFHEESPKNNYKLFHKPVITLFNYTATFSRHSHLPLTTQYLESIEVLKSLR 196
Query: 162 PSPPLPAKSRVA------AWVVSNFQERQLRARLYRQLAPHLRVDVFGRA---------- 205
PL +K+++ +V S+ R R+L ++ VD +G
Sbjct: 197 YLVPLQSKNKLRKRLAPLVYVQSDCDPPSDRDSYVRELMTYIEVDSYGECLRNKDLPQQL 256
Query: 206 -NGRPLCASCLVPTVAQYRFYLSFENSQHRDYITEKFWRNALVAGTVPVVLGPPRATYEA 264
N + A +AQY+F L+FEN+ DYITEKFWR L G VPV G P T
Sbjct: 257 KNPASMDADGFYRIIAQYKFILAFENAVCDDYITEKFWR-PLKLGVVPVYYGSPSIT--D 313
Query: 265 FVPAD-AFVHVDDFGSARELAAFLTGM--NESRYQRFFAWRDRLRV---RLFTDWRERFC 318
++P++ + + V +F RELA+++ + ++ Y+ + W+ + + RL T RER
Sbjct: 314 WLPSNKSAILVSEFSHPRELASYIRRLDSDDRLYEAYVEWKLKGEISNQRLLTALRERKW 373
Query: 319 AICD 322
+ D
Sbjct: 374 GVQD 377
>gi|169173184 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1230
Score = 33.9 bits (76), Expect = 0.22
Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 11/63 (17%)
Query: 16 GVLAGVALLAALWLLWLLGSAPRGTPAPQPTITILVWHWPFTDQPPELPSDTCTRYGIAR 75
G+ V LA L +L L+ S P P PQP+++ L + PS R G+AR
Sbjct: 450 GIFVSVESLAPLAILTLVHSRPLAQPRPQPSLSSL-----------DSPSARGVRVGLAR 498
Query: 76 CHL 78
HL
Sbjct: 499 DHL 501
>gi|219842266 usherin isoform B [Homo sapiens]
Length = 5202
Score = 30.4 bits (67), Expect = 2.4
Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 11/61 (18%)
Query: 20 GVALLAALWLLWLLGSAPRGTPAPQ-----PTITILVWHWPFTDQPPELPSDTCTRYGIA 74
G +L +W L AP G P+P+ PT I+ W QPP P+ + I
Sbjct: 2607 GCSLSPESQTVWTLPGAPEGIPSPELFSDTPTSVIISW------QPPTHPNGLVENFTIE 2660
Query: 75 R 75
R
Sbjct: 2661 R 2661
>gi|167614488 TBC1 domain family, member 10B [Homo sapiens]
Length = 808
Score = 30.0 bits (66), Expect = 3.1
Identities = 28/105 (26%), Positives = 40/105 (38%), Gaps = 15/105 (14%)
Query: 31 WLLGSAPRGTPAPQP-----------TITILVWHWPFTDQPPELPSDTCTRYGIARCHLS 79
W+ GSA PAP P T+ +L P+LPS + A +
Sbjct: 62 WVPGSAETSAPAPAPAPAPAPAVTGSTVVVLTLEASPEAPKPQLPSGPESPEPAAVAGVE 121
Query: 80 ANRSLLASADAVVFHHRELQTRRSHLPLAQRPRGQPWVWASMESP 124
+R+L A AD+ + + R S P P G P S +P
Sbjct: 122 TSRALAAGADS----PKTEEARPSPAPGPGTPTGTPTRTPSRTAP 162
>gi|25914749 ATP-binding cassette, sub-family C, member 10 [Homo
sapiens]
Length = 1464
Score = 29.6 bits (65), Expect = 4.1
Identities = 29/80 (36%), Positives = 35/80 (43%), Gaps = 25/80 (31%)
Query: 4 AGHGPTRRLRGLGVLAGVALLAALWL-----LWLLGSAPRG-------------TPAPQP 45
AG GP GL VLAG + A W+ LW+L +P G PAP
Sbjct: 50 AGPGPI----GLEVLAG-CVAAVAWISHSLALWVLAHSPHGHSRGPLALALVALLPAPAL 104
Query: 46 TITILVWHWP-FTDQPPELP 64
+T+L WH T PP LP
Sbjct: 105 VLTVL-WHCQRGTLLPPLLP 123
>gi|74272287 matrix metalloproteinase 9 preproprotein [Homo sapiens]
Length = 707
Score = 28.9 bits (63), Expect = 7.0
Identities = 25/88 (28%), Positives = 35/88 (39%), Gaps = 10/88 (11%)
Query: 250 TVPVVLGPPRATYEAFVPADAFVHVDDFGSARELAAFLTGMNESRYQRFFAWRDRLRVRL 309
T P GP AT P D +V+ F + E+ L + +Y RF R
Sbjct: 494 TGPPTAGPSTATTVPLSPVDDACNVNIFDAIAEIGNQLYLFKDGKYWRFSEGRGSRPQGP 553
Query: 310 FTDWRERFCAICDRYPHLPR--SQVYED 335
F I D++P LPR V+E+
Sbjct: 554 F--------LIADKWPALPRKLDSVFEE 573
>gi|148368962 NKF3 kinase family member [Homo sapiens]
Length = 1746
Score = 28.5 bits (62), Expect = 9.1
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Query: 129 GLSHLRGIFNWVLSYRRDSDIFVPY--GRLEPHWGPSPPLPAKSRVAAWVVSNFQERQLR 186
GL HL+ R ++ + V Y G +GP+ P P S +VSNF + + +
Sbjct: 1503 GLEHLKPYHVTHCDLRLENLLLVHYQPGGTAQGFGPAEPSPTSSYPTRLIVSNFSQAKQK 1562
Query: 187 ARL 189
+ L
Sbjct: 1563 SHL 1565
>gi|189217874 neurensin 1 [Homo sapiens]
Length = 195
Score = 28.5 bits (62), Expect = 9.1
Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 15/56 (26%)
Query: 241 FWRNALVAGTVPVVLG----------PPRATYEAFVPADAFV---HVDDFGSAREL 283
FW+ L++GTV V+LG PP+ EAF AD V H F SA ++
Sbjct: 61 FWKVGLISGTVFVILGLTVLAVGFLVPPK--IEAFGEADFVVVDTHAVQFNSALDM 114
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.326 0.139 0.470
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,286,561
Number of Sequences: 37866
Number of extensions: 754946
Number of successful extensions: 2442
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 2377
Number of HSP's gapped (non-prelim): 19
length of query: 342
length of database: 18,247,518
effective HSP length: 103
effective length of query: 239
effective length of database: 14,347,320
effective search space: 3429009480
effective search space used: 3429009480
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.