Search of human proteins with 47106052

Search of human proteins with 47106052

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|47106052 coiled-coil domain containing 103 [Homo sapiens]
         (242 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|47106052 coiled-coil domain containing 103 [Homo sapiens]          483   e-137
gi|157738667 FYVE and coiled-coil domain containing 1 [Homo sapi...    33   0.22 
gi|57165366 G4 protein [Homo sapiens]                                  33   0.29 
gi|116812616 RecQ protein-like 4 [Homo sapiens]                        31   1.1  
gi|239756284 PREDICTED: similar to GOLGA8B protein, partial [Hom...    30   1.9  
gi|209954788 activating transcription factor 6 beta isoform b [H...    30   1.9  
gi|20631977 activating transcription factor 6 beta isoform a [Ho...    30   1.9  
gi|5454084 serine palmitoyltransferase subunit 1 isoform a [Homo...    30   2.5  
gi|195947367 golgi autoantigen, golgin subfamily a, 8B [Homo sap...    29   3.2  
gi|31083099 golgi autoantigen, golgin subfamily a, 8A [Homo sapi...    29   3.2  
gi|122937347 pleckstrin homology domain containing, family M, me...    29   3.2  
gi|4557880 interferon gamma receptor 1 precursor [Homo sapiens]        29   4.2  
gi|205360962 polycystin 1 isoform 2 precursor [Homo sapiens]           29   4.2  
gi|205360954 polycystin 1 isoform 1 precursor [Homo sapiens]           29   4.2  
gi|194097460 zinc finger protein 562 isoform a [Homo sapiens]          29   4.2  
gi|194097458 zinc finger protein 562 isoform a [Homo sapiens]          29   4.2  
gi|105990535 coagulation factor V precursor [Homo sapiens]             28   5.5  
gi|239756241 PREDICTED: golgi autoantigen, golgin subfamily a-li...    28   5.5  
gi|239748997 PREDICTED: hypothetical protein XP_002346878 [Homo ...    28   5.5  
gi|239745089 PREDICTED: golgi autoantigen, golgin subfamily a-li...    28   5.5  
gi|239743019 PREDICTED: hypothetical protein XP_002342720 [Homo ...    28   5.5  
gi|34996489 pleckstrin homology domain interacting protein [Homo...    28   5.5  
gi|109715825 zinc finger protein 690 [Homo sapiens]                    28   5.5  
gi|59889558 neurotrophic tyrosine kinase, receptor, type 1 isofo...    28   7.2  
gi|4585712 neurotrophic tyrosine kinase, receptor, type 1 isofor...    28   7.2  
gi|56118210 neurotrophic tyrosine kinase, receptor, type 1 isofo...    28   7.2  
gi|221219020 NYD-SP11 protein [Homo sapiens]                           28   7.2  
gi|22325356 PALM2-AKAP2 protein isoform 2 [Homo sapiens]               28   7.2  
gi|6005709 PALM2-AKAP2 protein isoform 1 [Homo sapiens]                28   7.2  
gi|211971074 A kinase (PRKA) anchor protein 2 isoform 2 [Homo sa...    28   7.2  

>gi|47106052 coiled-coil domain containing 103 [Homo sapiens]
          Length = 242

 Score =  483 bits (1243), Expect = e-137
 Identities = 242/242 (100%), Positives = 242/242 (100%)

Query: 1   MERNDIINFKALEKELQAALTADEKYKRENAAKLRAVEQRVASYEEFRGIVLASHLKPLE 60
           MERNDIINFKALEKELQAALTADEKYKRENAAKLRAVEQRVASYEEFRGIVLASHLKPLE
Sbjct: 1   MERNDIINFKALEKELQAALTADEKYKRENAAKLRAVEQRVASYEEFRGIVLASHLKPLE 60

Query: 61  RKDKMGGKRTVPWNCHTIQGRTFQDVATEISPEKAPLQPETSADFYRDWRRHLPSGPERY 120
           RKDKMGGKRTVPWNCHTIQGRTFQDVATEISPEKAPLQPETSADFYRDWRRHLPSGPERY
Sbjct: 61  RKDKMGGKRTVPWNCHTIQGRTFQDVATEISPEKAPLQPETSADFYRDWRRHLPSGPERY 120

Query: 121 QALLQLGGPRLGCLFQTDVGFGLLGELLVALADHVGPADRAAVLGILCSLASTGRFTLNL 180
           QALLQLGGPRLGCLFQTDVGFGLLGELLVALADHVGPADRAAVLGILCSLASTGRFTLNL
Sbjct: 121 QALLQLGGPRLGCLFQTDVGFGLLGELLVALADHVGPADRAAVLGILCSLASTGRFTLNL 180

Query: 181 SLLSRAERESCKGLFQKLQAMGNPRSVKEGLSWEEQGLEEQSGGLQEEERLLQELLELYQ 240
           SLLSRAERESCKGLFQKLQAMGNPRSVKEGLSWEEQGLEEQSGGLQEEERLLQELLELYQ
Sbjct: 181 SLLSRAERESCKGLFQKLQAMGNPRSVKEGLSWEEQGLEEQSGGLQEEERLLQELLELYQ 240

Query: 241 VD 242
           VD
Sbjct: 241 VD 242


>gi|157738667 FYVE and coiled-coil domain containing 1 [Homo
           sapiens]
          Length = 1478

 Score = 33.1 bits (74), Expect = 0.22
 Identities = 16/33 (48%), Positives = 21/33 (63%)

Query: 205 RSVKEGLSWEEQGLEEQSGGLQEEERLLQELLE 237
           +  KE  S E +GLE Q  GLQ+E+  LQE L+
Sbjct: 934 QDAKEAASREREGLERQVAGLQQEKESLQEKLK 966


>gi|57165366 G4 protein [Homo sapiens]
          Length = 294

 Score = 32.7 bits (73), Expect = 0.29
 Identities = 45/155 (29%), Positives = 58/155 (37%), Gaps = 29/155 (18%)

Query: 95  APLQPETSADFYRDWRRHLPSGPERYQALLQLGGPRLGCLFQTDVGFGLLGELLVALADH 154
           APL+     +    W R  P  P RY     LGGP       T++   LL  L  AL   
Sbjct: 143 APLEKPGRREKLLGWLRGEPGAPSRY-----LGGPEECLQISTNLTLHLLELLASALLAL 197

Query: 155 VGPADRAA-------------VLGILCSLASTGRFTLNLSLLSRAERESCKGLFQKLQA- 200
                RAA             + G+L  LA+       LSLL+ A       LF  LQA 
Sbjct: 198 CSRPLRAALDTLGLRGPLGLWLHGLLSFLAALHGLHAVLSLLT-AHPLHFACLFGLLQAL 256

Query: 201 -----MGNPRSVKEGLSWEEQGLEEQSGGLQEEER 230
                +  P   +    WE +GLE +     EE+R
Sbjct: 257 VLAVSLREPNGDEAATDWESEGLEREG----EEQR 287


>gi|116812616 RecQ protein-like 4 [Homo sapiens]
          Length = 1208

 Score = 30.8 bits (68), Expect = 1.1
 Identities = 42/142 (29%), Positives = 55/142 (38%), Gaps = 11/142 (7%)

Query: 38   EQRVASYEEFRGIVLASHLKPLERKDKMGGKRTVPWNCHTIQGRTFQDVATEISPEKAPL 97
            E+ V  Y       L+    P  R+  MG +R +P    T+Q     + A E       L
Sbjct: 871  ERPVPKYPPQEAEQLSHQAAPGPRRVCMGHERALPIQL-TVQALDMPEEAIETLLCYLEL 929

Query: 98   QP----ETSADFYRDWRRHLPSGPERYQALLQLGGPRLGCLFQ---TDVGFGLLGEL--L 148
             P    E  A  Y   R + P GP + QAL     P   CL Q    D G G       +
Sbjct: 930  HPHHWLELLATTYTHCRLNCPGGPAQLQALAHRCPPLAVCLAQQLPEDPGQGSSSVEFDM 989

Query: 149  VALADHVGPADRAAVLGILCSL 170
            V L D +G  + A+V   LC L
Sbjct: 990  VKLVDSMG-WELASVRRALCQL 1010


>gi|239756284 PREDICTED: similar to GOLGA8B protein, partial [Homo
           sapiens]
          Length = 314

 Score = 30.0 bits (66), Expect = 1.9
 Identities = 15/33 (45%), Positives = 22/33 (66%)

Query: 205 RSVKEGLSWEEQGLEEQSGGLQEEERLLQELLE 237
           R  KE L  +E+ L+EQ   L+E+E+ LQ+L E
Sbjct: 41  RGQKERLREQEERLQEQQERLREQEKRLQQLAE 73


>gi|209954788 activating transcription factor 6 beta isoform b [Homo
           sapiens]
          Length = 700

 Score = 30.0 bits (66), Expect = 1.9
 Identities = 15/39 (38%), Positives = 23/39 (58%)

Query: 10  KALEKELQAALTADEKYKRENAAKLRAVEQRVASYEEFR 48
           + LE  LQA L  +++ +RENAA  R +E  +A   E +
Sbjct: 348 QGLEARLQAVLADNQQLRRENAALRRRLEALLAENSELK 386


>gi|20631977 activating transcription factor 6 beta isoform a [Homo
           sapiens]
          Length = 703

 Score = 30.0 bits (66), Expect = 1.9
 Identities = 15/39 (38%), Positives = 23/39 (58%)

Query: 10  KALEKELQAALTADEKYKRENAAKLRAVEQRVASYEEFR 48
           + LE  LQA L  +++ +RENAA  R +E  +A   E +
Sbjct: 351 QGLEARLQAVLADNQQLRRENAALRRRLEALLAENSELK 389


>gi|5454084 serine palmitoyltransferase subunit 1 isoform a [Homo
           sapiens]
          Length = 473

 Score = 29.6 bits (65), Expect = 2.5
 Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 1/51 (1%)

Query: 188 RESCKGLFQKLQAMGNPRSVKEGLSWE-EQGLEEQSGGLQEEERLLQELLE 237
           +E C  + + LQ +   + V E LS      LEE +G  +++ RLLQE+++
Sbjct: 367 KEKCGQIHKALQGISGLKVVGESLSPAFHLQLEESTGSREQDVRLLQEIVD 417


>gi|195947367 golgi autoantigen, golgin subfamily a, 8B [Homo
           sapiens]
          Length = 603

 Score = 29.3 bits (64), Expect = 3.2
 Identities = 15/33 (45%), Positives = 21/33 (63%)

Query: 205 RSVKEGLSWEEQGLEEQSGGLQEEERLLQELLE 237
           R  KE L  +E+ L+EQ   L+E E+ LQ+L E
Sbjct: 329 RGQKERLREQEERLQEQQERLREREKRLQQLAE 361


>gi|31083099 golgi autoantigen, golgin subfamily a, 8A [Homo
           sapiens]
          Length = 603

 Score = 29.3 bits (64), Expect = 3.2
 Identities = 15/33 (45%), Positives = 21/33 (63%)

Query: 205 RSVKEGLSWEEQGLEEQSGGLQEEERLLQELLE 237
           R  KE L  +E+ L+EQ   L+E E+ LQ+L E
Sbjct: 329 RGQKERLREQEERLQEQQERLREREKRLQQLAE 361


>gi|122937347 pleckstrin homology domain containing, family M,
           member 3 [Homo sapiens]
          Length = 761

 Score = 29.3 bits (64), Expect = 3.2
 Identities = 19/86 (22%), Positives = 36/86 (41%), Gaps = 9/86 (10%)

Query: 144 LGELLVALADHVGPADRAAVLGILCSLASTGRFTLNLSLLSRAERESCKGLFQ---KLQA 200
           LG+++     HV      +  G +C + + G        +S +  ESC  +F    K ++
Sbjct: 660 LGKVIKFATSHVYSCSLCSQKGFICEICNNGEILYPFEDISTSRCESCGAVFHSECKEKS 719

Query: 201 MGNPRSVKEGLS------WEEQGLEE 220
           +  PR V+  L       W+   ++E
Sbjct: 720 VPCPRCVRRELQKKQKSFWQRLNMDE 745


>gi|4557880 interferon gamma receptor 1 precursor [Homo sapiens]
          Length = 489

 Score = 28.9 bits (63), Expect = 4.2
 Identities = 14/42 (33%), Positives = 23/42 (54%)

Query: 21  TADEKYKRENAAKLRAVEQRVASYEEFRGIVLASHLKPLERK 62
           T D   K E+  +L ++ + V + E    +V  SHL P+ER+
Sbjct: 336 TEDNPGKVEHTEELSSITEVVTTEENIPDVVPGSHLTPIERE 377


>gi|205360962 polycystin 1 isoform 2 precursor [Homo sapiens]
          Length = 4302

 Score = 28.9 bits (63), Expect = 4.2
 Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 2/64 (3%)

Query: 160 RAAVLGILCSLASTGRFTLNLSLLSRAERESCKGLFQ--KLQAMGNPRSVKEGLSWEEQG 217
           RA  +G+L +L++     ++ + +S  E      LF   ++   GNP     GL+W  + 
Sbjct: 80  RALDVGLLANLSALAELDISNNKISTLEEGIFANLFNLSEINLSGNPFECDCGLAWLPRW 139

Query: 218 LEEQ 221
            EEQ
Sbjct: 140 AEEQ 143


>gi|205360954 polycystin 1 isoform 1 precursor [Homo sapiens]
          Length = 4303

 Score = 28.9 bits (63), Expect = 4.2
 Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 2/64 (3%)

Query: 160 RAAVLGILCSLASTGRFTLNLSLLSRAERESCKGLFQ--KLQAMGNPRSVKEGLSWEEQG 217
           RA  +G+L +L++     ++ + +S  E      LF   ++   GNP     GL+W  + 
Sbjct: 80  RALDVGLLANLSALAELDISNNKISTLEEGIFANLFNLSEINLSGNPFECDCGLAWLPRW 139

Query: 218 LEEQ 221
            EEQ
Sbjct: 140 AEEQ 143


>gi|194097460 zinc finger protein 562 isoform a [Homo sapiens]
          Length = 426

 Score = 28.9 bits (63), Expect = 4.2
 Identities = 19/68 (27%), Positives = 29/68 (42%)

Query: 41  VASYEEFRGIVLASHLKPLERKDKMGGKRTVPWNCHTIQGRTFQDVATEISPEKAPLQPE 100
           +++++   G      + P E K K+G       +       TF DVA E +PE+  L   
Sbjct: 1   MSAFDMSHGFFPREPICPFEEKTKIGTMVEDHRSNSYQDSVTFDDVAVEFTPEEWALLDT 60

Query: 101 TSADFYRD 108
           T    YRD
Sbjct: 61  TQKYLYRD 68


>gi|194097458 zinc finger protein 562 isoform a [Homo sapiens]
          Length = 426

 Score = 28.9 bits (63), Expect = 4.2
 Identities = 19/68 (27%), Positives = 29/68 (42%)

Query: 41  VASYEEFRGIVLASHLKPLERKDKMGGKRTVPWNCHTIQGRTFQDVATEISPEKAPLQPE 100
           +++++   G      + P E K K+G       +       TF DVA E +PE+  L   
Sbjct: 1   MSAFDMSHGFFPREPICPFEEKTKIGTMVEDHRSNSYQDSVTFDDVAVEFTPEEWALLDT 60

Query: 101 TSADFYRD 108
           T    YRD
Sbjct: 61  TQKYLYRD 68


>gi|105990535 coagulation factor V precursor [Homo sapiens]
          Length = 2224

 Score = 28.5 bits (62), Expect = 5.5
 Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 2/71 (2%)

Query: 79   QGRTFQDVATEISPEKAPLQPETSADFYRDWRRHLPSGPERYQALLQLGGPRLGCLFQTD 138
            +G+T++D + E   E   +QP +S  +   W     SGPE   +  +          + D
Sbjct: 1682 EGKTYEDDSPEWFKEDNAVQPNSSYTYV--WHATERSGPESPGSACRAWAYYSAVNPEKD 1739

Query: 139  VGFGLLGELLV 149
            +  GL+G LL+
Sbjct: 1740 IHSGLIGPLLI 1750


>gi|239756241 PREDICTED: golgi autoantigen, golgin subfamily a-like
           [Homo sapiens]
          Length = 899

 Score = 28.5 bits (62), Expect = 5.5
 Identities = 14/56 (25%), Positives = 30/56 (53%)

Query: 185 RAERESCKGLFQKLQAMGNPRSVKEGLSWEEQGLEEQSGGLQEEERLLQELLELYQ 240
           R E E+ +   +K+Q        +E   W++Q L EQ   L E+E++ ++  ++++
Sbjct: 460 REEEETMREQEEKMQKQEENMWEQEEKEWQQQRLPEQKEKLWEQEKMQEQEEKIWE 515


>gi|239748997 PREDICTED: hypothetical protein XP_002346878 [Homo
           sapiens]
          Length = 297

 Score = 28.5 bits (62), Expect = 5.5
 Identities = 14/24 (58%), Positives = 17/24 (70%)

Query: 210 GLSWEEQGLEEQSGGLQEEERLLQ 233
           GL  E+ GL+ + GGLQ EER LQ
Sbjct: 249 GLQVEKGGLQVEKGGLQVEERDLQ 272



 Score = 28.1 bits (61), Expect = 7.2
 Identities = 14/26 (53%), Positives = 17/26 (65%)

Query: 208 KEGLSWEEQGLEEQSGGLQEEERLLQ 233
           K GL  EE+ L+ + G LQ EER LQ
Sbjct: 261 KGGLQVEERDLQVEEGSLQVEERSLQ 286


>gi|239745089 PREDICTED: golgi autoantigen, golgin subfamily a-like
           [Homo sapiens]
          Length = 828

 Score = 28.5 bits (62), Expect = 5.5
 Identities = 14/56 (25%), Positives = 30/56 (53%)

Query: 185 RAERESCKGLFQKLQAMGNPRSVKEGLSWEEQGLEEQSGGLQEEERLLQELLELYQ 240
           R E E+ +   +K+Q        +E   W++Q L EQ   L E+E++ ++  ++++
Sbjct: 402 REEEETMREQEEKMQKQEENMWEQEEKEWQQQRLPEQKEKLWEQEKMQEQEEKIWE 457


>gi|239743019 PREDICTED: hypothetical protein XP_002342720 [Homo
           sapiens]
          Length = 487

 Score = 28.5 bits (62), Expect = 5.5
 Identities = 14/24 (58%), Positives = 17/24 (70%)

Query: 210 GLSWEEQGLEEQSGGLQEEERLLQ 233
           GL  E+ GL+ + GGLQ EER LQ
Sbjct: 439 GLQVEKGGLQVEKGGLQVEERDLQ 462



 Score = 28.1 bits (61), Expect = 7.2
 Identities = 14/26 (53%), Positives = 17/26 (65%)

Query: 208 KEGLSWEEQGLEEQSGGLQEEERLLQ 233
           K GL  EE+ L+ + G LQ EER LQ
Sbjct: 451 KGGLQVEERDLQVEEGSLQVEERSLQ 476


>gi|34996489 pleckstrin homology domain interacting protein [Homo
           sapiens]
          Length = 1821

 Score = 28.5 bits (62), Expect = 5.5
 Identities = 21/93 (22%), Positives = 39/93 (41%)

Query: 14  KELQAALTADEKYKRENAAKLRAVEQRVASYEEFRGIVLASHLKPLERKDKMGGKRTVPW 73
           K  +A  ++DE+ + E   + +  +++    EE  G +     KP ERK K      +  
Sbjct: 873 KTKKAESSSDEEEESEKQKQKQIKKEKKKVNEEKDGPISPKKKKPKERKQKRLAVGELTE 932

Query: 74  NCHTIQGRTFQDVATEISPEKAPLQPETSADFY 106
           N  T++        T+  P + P  P+   + Y
Sbjct: 933 NGLTLEEWLPSTWITDTIPRRCPFVPQMGDEVY 965


>gi|109715825 zinc finger protein 690 [Homo sapiens]
          Length = 852

 Score = 28.5 bits (62), Expect = 5.5
 Identities = 15/41 (36%), Positives = 25/41 (60%)

Query: 190 SCKGLFQKLQAMGNPRSVKEGLSWEEQGLEEQSGGLQEEER 230
           S KG   +L+ M  P+S +E LS  ++ +E Q  G+ ++ER
Sbjct: 110 SVKGQEVRLEKMTPPKSSQELLSVRQESVEPQPRGVPKKER 150


>gi|59889558 neurotrophic tyrosine kinase, receptor, type 1 isoform
           1 [Homo sapiens]
          Length = 790

 Score = 28.1 bits (61), Expect = 7.2
 Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)

Query: 175 RFTLNLSLLSRAERESCKGL-FQKLQAMGNPRSVKEGLSWEEQGLEEQSGGLQEEE 229
           R  L+ + L     ++ +GL  Q+L   GNP      L W ++  EE  GG+ E++
Sbjct: 119 RLNLSFNALESLSWKTVQGLSLQELVLSGNPLHCSCALRWLQRWEEEGLGGVPEQK 174


>gi|4585712 neurotrophic tyrosine kinase, receptor, type 1 isoform 2
           [Homo sapiens]
          Length = 796

 Score = 28.1 bits (61), Expect = 7.2
 Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)

Query: 175 RFTLNLSLLSRAERESCKGL-FQKLQAMGNPRSVKEGLSWEEQGLEEQSGGLQEEE 229
           R  L+ + L     ++ +GL  Q+L   GNP      L W ++  EE  GG+ E++
Sbjct: 119 RLNLSFNALESLSWKTVQGLSLQELVLSGNPLHCSCALRWLQRWEEEGLGGVPEQK 174


>gi|56118210 neurotrophic tyrosine kinase, receptor, type 1 isoform
           3 [Homo sapiens]
          Length = 760

 Score = 28.1 bits (61), Expect = 7.2
 Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)

Query: 175 RFTLNLSLLSRAERESCKGL-FQKLQAMGNPRSVKEGLSWEEQGLEEQSGGLQEEE 229
           R  L+ + L     ++ +GL  Q+L   GNP      L W ++  EE  GG+ E++
Sbjct: 89  RLNLSFNALESLSWKTVQGLSLQELVLSGNPLHCSCALRWLQRWEEEGLGGVPEQK 144


>gi|221219020 NYD-SP11 protein [Homo sapiens]
          Length = 2873

 Score = 28.1 bits (61), Expect = 7.2
 Identities = 12/26 (46%), Positives = 18/26 (69%)

Query: 209  EGLSWEEQGLEEQSGGLQEEERLLQE 234
            E LSW+E+ L ++ G L EE++ L E
Sbjct: 1726 EELSWKEEELNQEEGKLVEEKKKLAE 1751



 Score = 27.7 bits (60), Expect = 9.4
 Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 1/34 (2%)

Query: 208  KEGLSWEEQGLEEQSGGL-QEEERLLQELLELYQ 240
            +E L+W+ + L E+   L QEEE L+QE  +L Q
Sbjct: 1753 EEALAWQREKLSEEETKLAQEEELLIQEKEKLAQ 1786


>gi|22325356 PALM2-AKAP2 protein isoform 2 [Homo sapiens]
          Length = 1090

 Score = 28.1 bits (61), Expect = 7.2
 Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 2/60 (3%)

Query: 181  SLLSRAERESCKGLFQKLQAMGNPRSVKEGLSWEEQGLEEQSGGLQEEERLLQELLELYQ 240
            SL SR   ++  G  +K++   +P +  EG S +     E++ G Q  + L+Q L+E Y+
Sbjct: 987  SLPSRTCYKTAPGKIEKVKPPPSPTT--EGPSLQPDLAPEEAAGTQRPKNLMQTLMEDYE 1044


>gi|6005709 PALM2-AKAP2 protein isoform 1 [Homo sapiens]
          Length = 1103

 Score = 28.1 bits (61), Expect = 7.2
 Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 2/60 (3%)

Query: 181  SLLSRAERESCKGLFQKLQAMGNPRSVKEGLSWEEQGLEEQSGGLQEEERLLQELLELYQ 240
            SL SR   ++  G  +K++   +P +  EG S +     E++ G Q  + L+Q L+E Y+
Sbjct: 987  SLPSRTCYKTAPGKIEKVKPPPSPTT--EGPSLQPDLAPEEAAGTQRPKNLMQTLMEDYE 1044


>gi|211971074 A kinase (PRKA) anchor protein 2 isoform 2 [Homo
           sapiens]
          Length = 859

 Score = 28.1 bits (61), Expect = 7.2
 Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 2/60 (3%)

Query: 181 SLLSRAERESCKGLFQKLQAMGNPRSVKEGLSWEEQGLEEQSGGLQEEERLLQELLELYQ 240
           SL SR   ++  G  +K++   +P +  EG S +     E++ G Q  + L+Q L+E Y+
Sbjct: 756 SLPSRTCYKTAPGKIEKVKPPPSPTT--EGPSLQPDLAPEEAAGTQRPKNLMQTLMEDYE 813


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.317    0.135    0.391 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,339,098
Number of Sequences: 37866
Number of extensions: 428975
Number of successful extensions: 1870
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 1788
Number of HSP's gapped (non-prelim): 100
length of query: 242
length of database: 18,247,518
effective HSP length: 99
effective length of query: 143
effective length of database: 14,498,784
effective search space: 2073326112
effective search space used: 2073326112
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.