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Search of human proteins with 46389556
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|46389556 endosulfine alpha isoform 5 [Homo sapiens]
(133 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|46389556 endosulfine alpha isoform 5 [Homo sapiens] 278 1e-75
gi|46389550 endosulfine alpha isoform 1 [Homo sapiens] 243 3e-65
gi|46389552 endosulfine alpha isoform 2 [Homo sapiens] 235 7e-63
gi|46389558 endosulfine alpha isoform 6 [Homo sapiens] 233 4e-62
gi|46389560 endosulfine alpha isoform 7 [Homo sapiens] 225 9e-60
gi|4758272 endosulfine alpha isoform 3 [Homo sapiens] 198 1e-51
gi|46389554 endosulfine alpha isoform 4 [Homo sapiens] 190 3e-49
gi|5729732 cyclic AMP phosphoprotein, 19 kD [Homo sapiens] 153 3e-38
gi|169163530 PREDICTED: similar to endosulfine alpha [Homo sapiens] 132 1e-31
gi|169164492 PREDICTED: similar to hCG2040272 [Homo sapiens] 130 2e-31
gi|169164903 PREDICTED: similar to hCG2040272 [Homo sapiens] 130 2e-31
gi|46389562 endosulfine alpha isoform 8 [Homo sapiens] 88 2e-18
gi|111955162 5-azacytidine induced 1 isoform b [Homo sapiens] 30 0.57
gi|111955084 5-azacytidine induced 1 isoform a [Homo sapiens] 30 0.57
gi|126032350 protein kinase, DNA-activated, catalytic polypeptid... 28 1.6
gi|13654237 protein kinase, DNA-activated, catalytic polypeptide... 28 1.6
gi|113430845 PREDICTED: similar to protein kinase, DNA-activated... 28 1.6
gi|170650643 solute carrier family 22, member 23 isoform a [Homo... 28 1.6
gi|48526516 solute carrier family 22, member 23 isoform b [Homo ... 28 1.6
gi|36029914 valosin containing protein (p97)/p47 complex interac... 28 2.2
gi|38373677 guanine nucleotide-releasing factor 2 isoform b [Hom... 28 2.8
gi|38373675 guanine nucleotide-releasing factor 2 isoform a [Hom... 28 2.8
gi|125625322 RALBP1 associated Eps domain containing 2 isoform 2... 27 3.7
gi|125625326 RALBP1 associated Eps domain containing 2 isoform 1... 27 3.7
gi|153791630 bromodomain and WD repeat domain containing 3 [Homo... 27 4.8
>gi|46389556 endosulfine alpha isoform 5 [Homo sapiens]
Length = 133
Score = 278 bits (710), Expect = 1e-75
Identities = 133/133 (100%), Positives = 133/133 (100%)
Query: 1 MAGGLGCDVCYWFVEDTQEKEGILPERAEEAKLKAKYPSLGQKPGGSDFLMKRLQKGDYK 60
MAGGLGCDVCYWFVEDTQEKEGILPERAEEAKLKAKYPSLGQKPGGSDFLMKRLQKGDYK
Sbjct: 1 MAGGLGCDVCYWFVEDTQEKEGILPERAEEAKLKAKYPSLGQKPGGSDFLMKRLQKGDYK 60
Query: 61 SLHWSVLLCADEMQKYFDSGDYNMAKAKMKNKQLPSAGPDKNLVTGDHIPTPQDLPQRKS 120
SLHWSVLLCADEMQKYFDSGDYNMAKAKMKNKQLPSAGPDKNLVTGDHIPTPQDLPQRKS
Sbjct: 61 SLHWSVLLCADEMQKYFDSGDYNMAKAKMKNKQLPSAGPDKNLVTGDHIPTPQDLPQRKS 120
Query: 121 SLVTSKLAGGQVE 133
SLVTSKLAGGQVE
Sbjct: 121 SLVTSKLAGGQVE 133
>gi|46389550 endosulfine alpha isoform 1 [Homo sapiens]
Length = 137
Score = 243 bits (620), Expect = 3e-65
Identities = 118/119 (99%), Positives = 119/119 (100%)
Query: 15 EDTQEKEGILPERAEEAKLKAKYPSLGQKPGGSDFLMKRLQKGDYKSLHWSVLLCADEMQ 74
+DTQEKEGILPERAEEAKLKAKYPSLGQKPGGSDFLMKRLQKGDYKSLHWSVLLCADEMQ
Sbjct: 19 QDTQEKEGILPERAEEAKLKAKYPSLGQKPGGSDFLMKRLQKGDYKSLHWSVLLCADEMQ 78
Query: 75 KYFDSGDYNMAKAKMKNKQLPSAGPDKNLVTGDHIPTPQDLPQRKSSLVTSKLAGGQVE 133
KYFDSGDYNMAKAKMKNKQLPSAGPDKNLVTGDHIPTPQDLPQRKSSLVTSKLAGGQVE
Sbjct: 79 KYFDSGDYNMAKAKMKNKQLPSAGPDKNLVTGDHIPTPQDLPQRKSSLVTSKLAGGQVE 137
>gi|46389552 endosulfine alpha isoform 2 [Homo sapiens]
Length = 133
Score = 235 bits (600), Expect = 7e-63
Identities = 114/115 (99%), Positives = 115/115 (100%)
Query: 15 EDTQEKEGILPERAEEAKLKAKYPSLGQKPGGSDFLMKRLQKGDYKSLHWSVLLCADEMQ 74
+DTQEKEGILPERAEEAKLKAKYPSLGQKPGGSDFLMKRLQKGDYKSLHWSVLLCADEMQ
Sbjct: 19 QDTQEKEGILPERAEEAKLKAKYPSLGQKPGGSDFLMKRLQKGDYKSLHWSVLLCADEMQ 78
Query: 75 KYFDSGDYNMAKAKMKNKQLPSAGPDKNLVTGDHIPTPQDLPQRKSSLVTSKLAG 129
KYFDSGDYNMAKAKMKNKQLPSAGPDKNLVTGDHIPTPQDLPQRKSSLVTSKLAG
Sbjct: 79 KYFDSGDYNMAKAKMKNKQLPSAGPDKNLVTGDHIPTPQDLPQRKSSLVTSKLAG 133
>gi|46389558 endosulfine alpha isoform 6 [Homo sapiens]
Length = 117
Score = 233 bits (593), Expect = 4e-62
Identities = 117/133 (87%), Positives = 117/133 (87%), Gaps = 16/133 (12%)
Query: 1 MAGGLGCDVCYWFVEDTQEKEGILPERAEEAKLKAKYPSLGQKPGGSDFLMKRLQKGDYK 60
MAGGLGCDVCYWFVEDTQEKEGILPERAEEAKLKAKYPSLGQKPGGSDFLMKRLQKG
Sbjct: 1 MAGGLGCDVCYWFVEDTQEKEGILPERAEEAKLKAKYPSLGQKPGGSDFLMKRLQKG--- 57
Query: 61 SLHWSVLLCADEMQKYFDSGDYNMAKAKMKNKQLPSAGPDKNLVTGDHIPTPQDLPQRKS 120
QKYFDSGDYNMAKAKMKNKQLPSAGPDKNLVTGDHIPTPQDLPQRKS
Sbjct: 58 -------------QKYFDSGDYNMAKAKMKNKQLPSAGPDKNLVTGDHIPTPQDLPQRKS 104
Query: 121 SLVTSKLAGGQVE 133
SLVTSKLAGGQVE
Sbjct: 105 SLVTSKLAGGQVE 117
>gi|46389560 endosulfine alpha isoform 7 [Homo sapiens]
Length = 113
Score = 225 bits (573), Expect = 9e-60
Identities = 113/129 (87%), Positives = 113/129 (87%), Gaps = 16/129 (12%)
Query: 1 MAGGLGCDVCYWFVEDTQEKEGILPERAEEAKLKAKYPSLGQKPGGSDFLMKRLQKGDYK 60
MAGGLGCDVCYWFVEDTQEKEGILPERAEEAKLKAKYPSLGQKPGGSDFLMKRLQKG
Sbjct: 1 MAGGLGCDVCYWFVEDTQEKEGILPERAEEAKLKAKYPSLGQKPGGSDFLMKRLQKG--- 57
Query: 61 SLHWSVLLCADEMQKYFDSGDYNMAKAKMKNKQLPSAGPDKNLVTGDHIPTPQDLPQRKS 120
QKYFDSGDYNMAKAKMKNKQLPSAGPDKNLVTGDHIPTPQDLPQRKS
Sbjct: 58 -------------QKYFDSGDYNMAKAKMKNKQLPSAGPDKNLVTGDHIPTPQDLPQRKS 104
Query: 121 SLVTSKLAG 129
SLVTSKLAG
Sbjct: 105 SLVTSKLAG 113
>gi|4758272 endosulfine alpha isoform 3 [Homo sapiens]
Length = 121
Score = 198 bits (503), Expect = 1e-51
Identities = 102/119 (85%), Positives = 103/119 (86%), Gaps = 16/119 (13%)
Query: 15 EDTQEKEGILPERAEEAKLKAKYPSLGQKPGGSDFLMKRLQKGDYKSLHWSVLLCADEMQ 74
+DTQEKEGILPERAEEAKLKAKYPSLGQKPGGSDFLMKRLQKG Q
Sbjct: 19 QDTQEKEGILPERAEEAKLKAKYPSLGQKPGGSDFLMKRLQKG----------------Q 62
Query: 75 KYFDSGDYNMAKAKMKNKQLPSAGPDKNLVTGDHIPTPQDLPQRKSSLVTSKLAGGQVE 133
KYFDSGDYNMAKAKMKNKQLPSAGPDKNLVTGDHIPTPQDLPQRKSSLVTSKLAGGQVE
Sbjct: 63 KYFDSGDYNMAKAKMKNKQLPSAGPDKNLVTGDHIPTPQDLPQRKSSLVTSKLAGGQVE 121
>gi|46389554 endosulfine alpha isoform 4 [Homo sapiens]
Length = 117
Score = 190 bits (483), Expect = 3e-49
Identities = 98/115 (85%), Positives = 99/115 (86%), Gaps = 16/115 (13%)
Query: 15 EDTQEKEGILPERAEEAKLKAKYPSLGQKPGGSDFLMKRLQKGDYKSLHWSVLLCADEMQ 74
+DTQEKEGILPERAEEAKLKAKYPSLGQKPGGSDFLMKRLQKG Q
Sbjct: 19 QDTQEKEGILPERAEEAKLKAKYPSLGQKPGGSDFLMKRLQKG----------------Q 62
Query: 75 KYFDSGDYNMAKAKMKNKQLPSAGPDKNLVTGDHIPTPQDLPQRKSSLVTSKLAG 129
KYFDSGDYNMAKAKMKNKQLPSAGPDKNLVTGDHIPTPQDLPQRKSSLVTSKLAG
Sbjct: 63 KYFDSGDYNMAKAKMKNKQLPSAGPDKNLVTGDHIPTPQDLPQRKSSLVTSKLAG 117
>gi|5729732 cyclic AMP phosphoprotein, 19 kD [Homo sapiens]
Length = 112
Score = 153 bits (387), Expect = 3e-38
Identities = 79/105 (75%), Positives = 82/105 (78%), Gaps = 16/105 (15%)
Query: 25 PERAEEAKLKAKYPSLGQKPGGSDFLMKRLQKGDYKSLHWSVLLCADEMQKYFDSGDYNM 84
PE+AEEAKLKA+YP LGQKPGGSDFL KRLQKG QKYFDSGDYNM
Sbjct: 24 PEKAEEAKLKARYPHLGQKPGGSDFLRKRLQKG----------------QKYFDSGDYNM 67
Query: 85 AKAKMKNKQLPSAGPDKNLVTGDHIPTPQDLPQRKSSLVTSKLAG 129
AKAKMKNKQLP+A PDK VTGDHIPTPQDLPQRK SLV SKLAG
Sbjct: 68 AKAKMKNKQLPTAAPDKTEVTGDHIPTPQDLPQRKPSLVASKLAG 112
>gi|169163530 PREDICTED: similar to endosulfine alpha [Homo sapiens]
Length = 164
Score = 132 bits (331), Expect = 1e-31
Identities = 73/112 (65%), Positives = 82/112 (73%), Gaps = 21/112 (18%)
Query: 18 QEKEGILPERAEEAKLKAKYPSLGQKPGGSDFLMKRLQKGDYKSLHWSVLLCADEMQKYF 77
Q+KEGIL ER EE KLK+KY SLGQ+PGGS+FLMKRLQKG ++YF
Sbjct: 74 QDKEGILSERVEEPKLKSKYLSLGQEPGGSNFLMKRLQKG----------------KRYF 117
Query: 78 DSGDYNMAKAKMKNKQLPSAGPDKNLVTGDHIPTPQDLPQRKSSLVTSKLAG 129
SGDYNMAKAKMK+KQLPSA P KNLVTGDHI LP RKS ++TSKLAG
Sbjct: 118 VSGDYNMAKAKMKSKQLPSAEPKKNLVTGDHI-----LPHRKSLVITSKLAG 164
>gi|169164492 PREDICTED: similar to hCG2040272 [Homo sapiens]
Length = 164
Score = 130 bits (328), Expect = 2e-31
Identities = 72/112 (64%), Positives = 82/112 (73%), Gaps = 21/112 (18%)
Query: 18 QEKEGILPERAEEAKLKAKYPSLGQKPGGSDFLMKRLQKGDYKSLHWSVLLCADEMQKYF 77
Q+KEGIL ER EE KLK+KY +LGQ+PGGS+FLMKRLQKG ++YF
Sbjct: 74 QDKEGILSERVEEPKLKSKYLNLGQEPGGSNFLMKRLQKG----------------KRYF 117
Query: 78 DSGDYNMAKAKMKNKQLPSAGPDKNLVTGDHIPTPQDLPQRKSSLVTSKLAG 129
SGDYNMAKAKMK+KQLPSA P KNLVTGDHI LP RKS ++TSKLAG
Sbjct: 118 VSGDYNMAKAKMKSKQLPSAEPKKNLVTGDHI-----LPHRKSLVITSKLAG 164
>gi|169164903 PREDICTED: similar to hCG2040272 [Homo sapiens]
Length = 164
Score = 130 bits (328), Expect = 2e-31
Identities = 72/112 (64%), Positives = 82/112 (73%), Gaps = 21/112 (18%)
Query: 18 QEKEGILPERAEEAKLKAKYPSLGQKPGGSDFLMKRLQKGDYKSLHWSVLLCADEMQKYF 77
Q+KEGIL ER EE KLK+KY +LGQ+PGGS+FLMKRLQKG ++YF
Sbjct: 74 QDKEGILSERVEEPKLKSKYLNLGQEPGGSNFLMKRLQKG----------------KRYF 117
Query: 78 DSGDYNMAKAKMKNKQLPSAGPDKNLVTGDHIPTPQDLPQRKSSLVTSKLAG 129
SGDYNMAKAKMK+KQLPSA P KNLVTGDHI LP RKS ++TSKLAG
Sbjct: 118 VSGDYNMAKAKMKSKQLPSAEPKKNLVTGDHI-----LPHRKSLVITSKLAG 164
>gi|46389562 endosulfine alpha isoform 8 [Homo sapiens]
Length = 105
Score = 88.2 bits (217), Expect = 2e-18
Identities = 42/43 (97%), Positives = 43/43 (100%)
Query: 15 EDTQEKEGILPERAEEAKLKAKYPSLGQKPGGSDFLMKRLQKG 57
+DTQEKEGILPERAEEAKLKAKYPSLGQKPGGSDFLMKRLQKG
Sbjct: 19 QDTQEKEGILPERAEEAKLKAKYPSLGQKPGGSDFLMKRLQKG 61
>gi|111955162 5-azacytidine induced 1 isoform b [Homo sapiens]
Length = 1044
Score = 30.0 bits (66), Expect = 0.57
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 86 KAKMKNKQLPSAGP-DKNLVTGDHIPTPQDLPQRKSSLVTSKLAGG 130
KA LP+AGP D+ L T D P PQ P+ ++ V ++ A G
Sbjct: 393 KANNTGGGLPAAGPGDRCLPTSDSSPEPQQPPEDRTQDVLAQDAAG 438
>gi|111955084 5-azacytidine induced 1 isoform a [Homo sapiens]
Length = 1080
Score = 30.0 bits (66), Expect = 0.57
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 86 KAKMKNKQLPSAGP-DKNLVTGDHIPTPQDLPQRKSSLVTSKLAGG 130
KA LP+AGP D+ L T D P PQ P+ ++ V ++ A G
Sbjct: 393 KANNTGGGLPAAGPGDRCLPTSDSSPEPQQPPEDRTQDVLAQDAAG 438
>gi|126032350 protein kinase, DNA-activated, catalytic polypeptide
isoform 2 [Homo sapiens]
Length = 4097
Score = 28.5 bits (62), Expect = 1.6
Identities = 26/96 (27%), Positives = 39/96 (40%), Gaps = 10/96 (10%)
Query: 13 FVEDTQEKEGILPERAEEAKLKAKYPSLGQ---KPGGSDFLMKRLQKGDYKSLHWSVLLC 69
FVE TQ +G L R +E L A++P GQ DF + + G S W
Sbjct: 2606 FVE-TQASQGTLQTRTQEGSLSARWPVAGQIRATQQQHDFTLTQTADG-RSSFDWLTGSS 2663
Query: 70 ADEMQKYFDSGDYNMAKA-----KMKNKQLPSAGPD 100
D + + ++ A +++ L S GPD
Sbjct: 2664 TDPLVDHTSPSSDSLLFAHKRSERLQRAPLKSVGPD 2699
>gi|13654237 protein kinase, DNA-activated, catalytic polypeptide
isoform 1 [Homo sapiens]
Length = 4128
Score = 28.5 bits (62), Expect = 1.6
Identities = 26/96 (27%), Positives = 39/96 (40%), Gaps = 10/96 (10%)
Query: 13 FVEDTQEKEGILPERAEEAKLKAKYPSLGQ---KPGGSDFLMKRLQKGDYKSLHWSVLLC 69
FVE TQ +G L R +E L A++P GQ DF + + G S W
Sbjct: 2606 FVE-TQASQGTLQTRTQEGSLSARWPVAGQIRATQQQHDFTLTQTADG-RSSFDWLTGSS 2663
Query: 70 ADEMQKYFDSGDYNMAKA-----KMKNKQLPSAGPD 100
D + + ++ A +++ L S GPD
Sbjct: 2664 TDPLVDHTSPSSDSLLFAHKRSERLQRAPLKSVGPD 2699
>gi|113430845 PREDICTED: similar to protein kinase, DNA-activated,
catalytic polypeptide [Homo sapiens]
Length = 4096
Score = 28.5 bits (62), Expect = 1.6
Identities = 26/96 (27%), Positives = 39/96 (40%), Gaps = 10/96 (10%)
Query: 13 FVEDTQEKEGILPERAEEAKLKAKYPSLGQ---KPGGSDFLMKRLQKGDYKSLHWSVLLC 69
FVE TQ +G L R +E L A++P GQ DF + + G S W
Sbjct: 2605 FVE-TQASQGTLQTRTQEGSLSARWPVAGQIRATQQQHDFTLTQTADG-RSSFDWLTGSS 2662
Query: 70 ADEMQKYFDSGDYNMAKA-----KMKNKQLPSAGPD 100
D + + ++ A +++ L S GPD
Sbjct: 2663 TDPLVDHTSPSSDSLLFAHKRSERLQRAPLKSVGPD 2698
>gi|170650643 solute carrier family 22, member 23 isoform a [Homo
sapiens]
Length = 686
Score = 28.5 bits (62), Expect = 1.6
Identities = 14/57 (24%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Query: 7 CDVCYWFVEDTQEKEGILPERAEEAKLKAKYPSLGQKPGGSDFLMKRLQKGDYKSLH 63
C +C + +++++ LPE + + P L K G L+ + DY LH
Sbjct: 611 CIICILLLPESRDQN--LPENISNGEHYTRQPLLPHKKGEQPLLLTNAELKDYSGLH 665
>gi|48526516 solute carrier family 22, member 23 isoform b [Homo
sapiens]
Length = 405
Score = 28.5 bits (62), Expect = 1.6
Identities = 14/57 (24%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Query: 7 CDVCYWFVEDTQEKEGILPERAEEAKLKAKYPSLGQKPGGSDFLMKRLQKGDYKSLH 63
C +C + +++++ LPE + + P L K G L+ + DY LH
Sbjct: 330 CIICILLLPESRDQN--LPENISNGEHYTRQPLLPHKKGEQPLLLTNAELKDYSGLH 384
>gi|36029914 valosin containing protein (p97)/p47 complex interacting
protein 1 [Homo sapiens]
Length = 1222
Score = 28.1 bits (61), Expect = 2.2
Identities = 13/37 (35%), Positives = 21/37 (56%)
Query: 97 AGPDKNLVTGDHIPTPQDLPQRKSSLVTSKLAGGQVE 133
A D++L +P DLPQRK+ +V+S G ++
Sbjct: 1118 ASMDRHLRDQSTEQSPSDLPQRKTEVVSSSAKSGSLQ 1154
>gi|38373677 guanine nucleotide-releasing factor 2 isoform b [Homo
sapiens]
Length = 1095
Score = 27.7 bits (60), Expect = 2.8
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 3/41 (7%)
Query: 93 QLPSAG---PDKNLVTGDHIPTPQDLPQRKSSLVTSKLAGG 130
QLP G PD L G TP LP++K S+ A G
Sbjct: 449 QLPLGGHPQPDGPLAPGQQTDTPPALPEKKRRSAASQTADG 489
>gi|38373675 guanine nucleotide-releasing factor 2 isoform a [Homo
sapiens]
Length = 1077
Score = 27.7 bits (60), Expect = 2.8
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 3/41 (7%)
Query: 93 QLPSAG---PDKNLVTGDHIPTPQDLPQRKSSLVTSKLAGG 130
QLP G PD L G TP LP++K S+ A G
Sbjct: 431 QLPLGGHPQPDGPLAPGQQTDTPPALPEKKRRSAASQTADG 471
>gi|125625322 RALBP1 associated Eps domain containing 2 isoform 2
[Homo sapiens]
Length = 659
Score = 27.3 bits (59), Expect = 3.7
Identities = 13/45 (28%), Positives = 23/45 (51%)
Query: 81 DYNMAKAKMKNKQLPSAGPDKNLVTGDHIPTPQDLPQRKSSLVTS 125
D N KA+ +++ S ++ + G+ PTP PQ+ S +S
Sbjct: 448 DSNSLKARPRSRSYSSTSIEEAMKRGEDPPTPPPRPQKTHSRASS 492
>gi|125625326 RALBP1 associated Eps domain containing 2 isoform 1
[Homo sapiens]
Length = 660
Score = 27.3 bits (59), Expect = 3.7
Identities = 13/45 (28%), Positives = 23/45 (51%)
Query: 81 DYNMAKAKMKNKQLPSAGPDKNLVTGDHIPTPQDLPQRKSSLVTS 125
D N KA+ +++ S ++ + G+ PTP PQ+ S +S
Sbjct: 449 DSNSLKARPRSRSYSSTSIEEAMKRGEDPPTPPPRPQKTHSRASS 493
>gi|153791630 bromodomain and WD repeat domain containing 3 [Homo
sapiens]
Length = 1802
Score = 26.9 bits (58), Expect = 4.8
Identities = 11/47 (23%), Positives = 24/47 (51%)
Query: 15 EDTQEKEGILPERAEEAKLKAKYPSLGQKPGGSDFLMKRLQKGDYKS 61
++ + E ++PER +++ L Y + P + + L+ G+Y S
Sbjct: 1340 QEGESSESVVPERQQDSSLSEDYQDVIDTPVDFSTVKETLEAGNYGS 1386
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.133 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,855,005
Number of Sequences: 37866
Number of extensions: 255849
Number of successful extensions: 468
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 437
Number of HSP's gapped (non-prelim): 26
length of query: 133
length of database: 18,247,518
effective HSP length: 91
effective length of query: 42
effective length of database: 14,801,712
effective search space: 621671904
effective search space used: 621671904
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.