Guide to the Human Genome
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Search of human proteins with 13236549

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|13236549 major facilitator superfamily domain containing 11
[Homo sapiens]
         (449 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|13236549 major facilitator superfamily domain containing 11 [...   885   0.0  
gi|221139828 unc-93 homolog A isoform 2 [Homo sapiens]                 88   2e-17
gi|29336077 unc-93 homolog A isoform 1 [Homo sapiens]                  86   7e-17
gi|4502381 BCL2-like 1 isoform 2 [Homo sapiens]                        35   0.14 
gi|46361976 solute carrier family 37 (glycerol-3-phosphate trans...    34   0.24 
gi|45580709 unc-93 homolog B1 [Homo sapiens]                           34   0.31 
gi|225543525 solute carrier organic anion transporter family, me...    33   0.53 
gi|4502415 Burkitt lymphoma receptor 1 isoform 1 [Homo sapiens]        32   1.5  
gi|14589869 Burkitt lymphoma receptor 1 isoform 2 [Homo sapiens]       32   1.5  
gi|53828674 olfactory receptor, family 13, subfamily C, member 4...    30   3.4  
gi|111378393 sodium channel, voltage-gated, type VII, alpha [Hom...    30   4.4  
gi|185136021 spinster homolog 2 [Homo sapiens]                         29   7.6  
gi|239755577 PREDICTED: similar to unc-93 homolog B1 (C. elegans...    29   7.6  
gi|239750109 PREDICTED: similar to unc-93 homolog B1 (C. elegans...    29   7.6  
gi|116235487 chromodomain protein, Y-like 2 [Homo sapiens]             29   7.6  
gi|110825978 DNA-damage regulated autophagy modulator 1 [Homo sa...    29   9.9  
gi|21361834 solute carrier family 22, member 17 isoform a [Homo ...    29   9.9  

>gi|13236549 major facilitator superfamily domain containing 11
           [Homo sapiens]
          Length = 449

 Score =  885 bits (2288), Expect = 0.0
 Identities = 449/449 (100%), Positives = 449/449 (100%)

Query: 1   MSPESKKLFNIIILGVAFMFMFTAFQTCGNVAQTVIRSLNRTDFHGSGYTSMAIIYGVFS 60
           MSPESKKLFNIIILGVAFMFMFTAFQTCGNVAQTVIRSLNRTDFHGSGYTSMAIIYGVFS
Sbjct: 1   MSPESKKLFNIIILGVAFMFMFTAFQTCGNVAQTVIRSLNRTDFHGSGYTSMAIIYGVFS 60

Query: 61  ASNLITPSVVAIVGPQLSMFASGLFYSMYIAVFIQPFPWSFYTASVFIGIAAAVLWTAQG 120
           ASNLITPSVVAIVGPQLSMFASGLFYSMYIAVFIQPFPWSFYTASVFIGIAAAVLWTAQG
Sbjct: 61  ASNLITPSVVAIVGPQLSMFASGLFYSMYIAVFIQPFPWSFYTASVFIGIAAAVLWTAQG 120

Query: 121 NCLTINSDEHSIGRNSGIFWALLQSSLFFGNLYIYFAWQGKTQISESDRRTVFIALTVIS 180
           NCLTINSDEHSIGRNSGIFWALLQSSLFFGNLYIYFAWQGKTQISESDRRTVFIALTVIS
Sbjct: 121 NCLTINSDEHSIGRNSGIFWALLQSSLFFGNLYIYFAWQGKTQISESDRRTVFIALTVIS 180

Query: 181 LVGTVLFFLIRKPDSENVLGEDESSDDQDMEVNESAQNNLTKAVDAFKKSFKLCVTKEML 240
           LVGTVLFFLIRKPDSENVLGEDESSDDQDMEVNESAQNNLTKAVDAFKKSFKLCVTKEML
Sbjct: 181 LVGTVLFFLIRKPDSENVLGEDESSDDQDMEVNESAQNNLTKAVDAFKKSFKLCVTKEML 240

Query: 241 LLSITTAYTGLELTFFSGVYGTCIGATNKFGAEEKSLIGLSGIFIGIGEILGGSLFGLLS 300
           LLSITTAYTGLELTFFSGVYGTCIGATNKFGAEEKSLIGLSGIFIGIGEILGGSLFGLLS
Sbjct: 241 LLSITTAYTGLELTFFSGVYGTCIGATNKFGAEEKSLIGLSGIFIGIGEILGGSLFGLLS 300

Query: 301 KNNRFGRNPVVLLGILVHFIAFYLIFLNMPGDAPIAPVKGTDSSAYIKSSKEVAILCSFL 360
           KNNRFGRNPVVLLGILVHFIAFYLIFLNMPGDAPIAPVKGTDSSAYIKSSKEVAILCSFL
Sbjct: 301 KNNRFGRNPVVLLGILVHFIAFYLIFLNMPGDAPIAPVKGTDSSAYIKSSKEVAILCSFL 360

Query: 361 LGLGDSCFNTQLLSILGFLYSEDSAPAFAIFKFVQSICAAVAFFYSNYLLLHWQLLVMVI 420
           LGLGDSCFNTQLLSILGFLYSEDSAPAFAIFKFVQSICAAVAFFYSNYLLLHWQLLVMVI
Sbjct: 361 LGLGDSCFNTQLLSILGFLYSEDSAPAFAIFKFVQSICAAVAFFYSNYLLLHWQLLVMVI 420

Query: 421 FGFFGTISFFTVEWEAAAFVARGSDYRSI 449
           FGFFGTISFFTVEWEAAAFVARGSDYRSI
Sbjct: 421 FGFFGTISFFTVEWEAAAFVARGSDYRSI 449


>gi|221139828 unc-93 homolog A isoform 2 [Homo sapiens]
          Length = 415

 Score = 87.8 bits (216), Expect = 2e-17
 Identities = 95/428 (22%), Positives = 179/428 (41%), Gaps = 71/428 (16%)

Query: 6   KKLFNIIILGVAFMFMFTAFQTCGNVAQTVIRSLNRTDFHGSGYTSMAIIYG-VFSASNL 64
           + L N++++   F+ +FTA+    ++  ++          G G T+++ +YG +  +S  
Sbjct: 3   RSLRNVLVVSFGFLLLFTAYGGLQSLQSSLYSE------EGLGVTALSTLYGGMLLSSMF 56

Query: 65  ITPSVVAIVGPQLSMFASGLFYSMYIAVFIQPFPWSFYT---ASVFIGIAAAVLWTAQGN 121
           + P ++  +G + ++  S      Y+A  +  F  S+YT    S+ +G+ AA LW+AQ  
Sbjct: 57  LPPLLIERLGCKGTIILS---MCGYVAFSVGNFFASWYTLIPTSILLGLGAAPLWSAQCT 113

Query: 122 CLTINSDEHS----------IGRNSGIFWALLQSSLFFGNLYIYFAWQGKTQISESDRRT 171
            LTI  + H+          + +  GIF+ + QSS  +GNL     + G+T    S    
Sbjct: 114 YLTITGNTHAEKAGKRGKDMVNQYFGIFFLIFQSSGVWGNLISSLVF-GQTPSQGSGVLA 172

Query: 172 VFIALTVISLVGTVLFFLIRKPDSENVLGEDESSDDQDMEVNESAQNNLTKAVDAFKKSF 231
           V +    +  +                         +D++     +            +F
Sbjct: 173 VLMIAAFLQPI-------------------------RDVQRESEGEKKSVPFWSTLLSTF 207

Query: 232 KLCVTKEMLLLSITTAYTGLELTFFSGVYGTCIGATNKFGAEEKSLIGLSGIFIGIGEIL 291
           KL   K + LL +   Y+GL+  F S  Y T    T   G +    +G   I     + L
Sbjct: 208 KLYRDKRLCLLILLPLYSGLQQGFLSSEY-TRSYVTCTLGIQ---FVGYVMICFSATDAL 263

Query: 292 GGSLFGLLSKNNRFGRNPVVLLGILVHFIAFYLIFLNMPGDAPIAPVKGTDSSAYIKSSK 351
              L+G +S+    GR  + +LG + H      + L  P    +A               
Sbjct: 264 CSVLYGKVSQYT--GRAVLYVLGAVTHVSCMIALLLWRPRADHLA--------------- 306

Query: 352 EVAILCSFLLGLGDSCFNTQLLSILGFLYSEDSAPAFAIFKFVQSICAAVAFFYSNYLLL 411
            V  + S L G+ D+ + TQ  ++ G L+ +    AFA ++  +++   +AF YS +L +
Sbjct: 307 -VFFVFSGLWGVADAVWQTQNNALYGVLFEKSKEAAFANYRLWEALGFVIAFGYSMFLCV 365

Query: 412 HWQLLVMV 419
           H +L +++
Sbjct: 366 HVKLYILL 373


>gi|29336077 unc-93 homolog A isoform 1 [Homo sapiens]
          Length = 457

 Score = 85.9 bits (211), Expect = 7e-17
 Identities = 100/445 (22%), Positives = 188/445 (42%), Gaps = 63/445 (14%)

Query: 6   KKLFNIIILGVAFMFMFTAFQTCGNVAQTVIRSLNRTDFHGSGYTSMAIIYG-VFSASNL 64
           + L N++++   F+ +FTA+    ++  ++          G G T+++ +YG +  +S  
Sbjct: 3   RSLRNVLVVSFGFLLLFTAYGGLQSLQSSLYSE------EGLGVTALSTLYGGMLLSSMF 56

Query: 65  ITPSVVAIVGPQLSMFASGLFYSMYIAVFIQPFPWSFYT---ASVFIGIAAAVLWTAQGN 121
           + P ++  +G + ++  S      Y+A  +  F  S+YT    S+ +G+ AA LW+AQ  
Sbjct: 57  LPPLLIERLGCKGTIILS---MCGYVAFSVGNFFASWYTLIPTSILLGLGAAPLWSAQCT 113

Query: 122 CLTINSDEHS----------IGRNSGIFWALLQSSLFFGNLYIYFAWQGKT--------- 162
            LTI  + H+          + +  GIF+ + QSS  +GNL     + G+T         
Sbjct: 114 YLTITGNTHAEKAGKRGKDMVNQYFGIFFLIFQSSGVWGNLISSLVF-GQTPSQETLPEE 172

Query: 163 QISESDRRTVFIALTVIS--------LVGTVLFFLIRKPDSENVLGEDESSDDQDMEVNE 214
           Q++        +A T  +        LV T+L           ++        +D++   
Sbjct: 173 QLTSCGASDCLMATTTTNSTQRPSQQLVYTLLGIYTGSGVLAVLMIAAFLQPIRDVQRES 232

Query: 215 SAQNNLTKAVDAFKKSFKLCVTKEMLLLSITTAYTGLELTFFSGVYGTCIGATNKFGAEE 274
             +            +FKL   K + LL +   Y+GL+  F S  Y T    T   G + 
Sbjct: 233 EGEKKSVPFWSTLLSTFKLYRDKRLCLLILLPLYSGLQQGFLSSEY-TRSYVTCTLGIQ- 290

Query: 275 KSLIGLSGIFIGIGEILGGSLFGLLSKNNRFGRNPVVLLGILVHFIAFYLIFLNMPGDAP 334
              +G   I     + L   L+G +S+    GR  + +LG + H      + L  P    
Sbjct: 291 --FVGYVMICFSATDALCSVLYGKVSQYT--GRAVLYVLGAVTHVSCMIALLLWRPRADH 346

Query: 335 IAPVKGTDSSAYIKSSKEVAILCSFLLGLGDSCFNTQLLSILGFLYSEDSAPAFAIFKFV 394
           +A                V  + S L G+ D+ + TQ  ++ G L+ +    AFA ++  
Sbjct: 347 LA----------------VFFVFSGLWGVADAVWQTQNNALYGVLFEKSKEAAFANYRLW 390

Query: 395 QSICAAVAFFYSNYLLLHWQLLVMV 419
           +++   +AF YS +L +H +L +++
Sbjct: 391 EALGFVIAFGYSMFLCVHVKLYILL 415


>gi|4502381 BCL2-like 1 isoform 2 [Homo sapiens]
          Length = 170

 Score = 35.0 bits (79), Expect = 0.14
 Identities = 32/122 (26%), Positives = 53/122 (43%), Gaps = 3/122 (2%)

Query: 177 TVISLVGTVLFFLIRKPDSENVLGEDESSDDQDMEVNESAQNNLTKAVDAFKKSFKLCVT 236
           T  ++ G   + L   P      G   S D +++    + +  L +A D F+  ++   +
Sbjct: 47  TPSAINGNPSWHLADSPAVNGATGHSSSLDAREVIPMAAVKQALREAGDEFELRYRRAFS 106

Query: 237 KEMLLLSIT--TAYTGLELTFFSGVYGTCIGATNKFGAEEKSLIGLSGIFIGIGEILGGS 294
                L IT  TAY   E   F  +YG    A ++ G E  +   L+G+ +  G +L GS
Sbjct: 107 DLTSQLHITPGTAYQSFEQDTFVELYGNNAAAESRKGQERFNRWFLTGMTVA-GVVLLGS 165

Query: 295 LF 296
           LF
Sbjct: 166 LF 167


>gi|46361976 solute carrier family 37 (glycerol-3-phosphate
           transporter), member 3 isoform 1 [Homo sapiens]
          Length = 494

 Score = 34.3 bits (77), Expect = 0.24
 Identities = 40/151 (26%), Positives = 71/151 (47%), Gaps = 20/151 (13%)

Query: 183 GTVLFF-LIRKPDSENVLG-------EDES--------SDDQDMEVNESAQNNLTKAVDA 226
           G V+FF L+  P+   + G       E++S         ++ + E N S Q++ + A   
Sbjct: 220 GIVIFFGLLVSPEEIGLSGIEAEENFEEDSHRPLINGGENEDEYEPNYSIQDDSSVAQVK 279

Query: 227 FKKSFKLCVTKEMLLLSITTAYTGLELTFFSGVYGTCIGATNKFGAEEKSLIGLSGIFIG 286
               ++ C    ++  S+  AY  L+L  +S  +      +N FG +E     LS I+  
Sbjct: 280 AISFYQACCLPGVIPYSL--AYACLKLVNYSFFFWLPFYLSNNFGWKEAEADKLS-IWYD 336

Query: 287 IGEILGGSLFGLLSKNNRFGRNPVVLLGILV 317
           +G I+GG+L G +S   +  R PV+ L +L+
Sbjct: 337 VGGIIGGTLQGFISDVLQ-KRAPVLALSLLL 366


>gi|45580709 unc-93 homolog B1 [Homo sapiens]
          Length = 597

 Score = 33.9 bits (76), Expect = 0.31
 Identities = 16/64 (25%), Positives = 34/64 (53%)

Query: 61  ASNLITPSVVAIVGPQLSMFASGLFYSMYIAVFIQPFPWSFYTASVFIGIAAAVLWTAQG 120
           A+ L TP ++   G +  MF +   Y+++++       ++   ++V +G+A   LW + G
Sbjct: 121 AALLYTPVLIRFFGTKWMMFLAVGIYALFVSTNYWERYYTLVPSAVALGMAIVPLWASMG 180

Query: 121 NCLT 124
           N +T
Sbjct: 181 NYIT 184



 Score = 33.5 bits (75), Expect = 0.40
 Identities = 45/197 (22%), Positives = 81/197 (41%), Gaps = 25/197 (12%)

Query: 248 YTGLELTFFSGVYGTCIGATNKFGAEEKSLIGLSGIFIGIGEILGGSLFGLLSKNNRFGR 307
           Y+G E+ F       C G    +G     L  L+ + +     LG S   LL     +  
Sbjct: 349 YSGFEVLF------ACTGIALGYGVCSVGLERLAYLLVAYS--LGASAASLLGLLGLWLP 400

Query: 308 NPVVLL-GILVHFIAFYLIFLNMPGDAPIAPVKGTDSSAYIKSSKEVAILCSFLLGLGDS 366
            PV L+ G  VH +  +++F      AP+  V       Y+ ++         L G+G +
Sbjct: 401 RPVPLVAGAGVHLLLTFILFFW----APVPRVLQHSWILYVAAA---------LWGVGSA 447

Query: 367 CFNTQLLSILGFLYSEDSAP--AFAIFKFVQSICAAVAFFYSNYLLLHWQLLVMVIFGFF 424
              T L ++LG LY +       F I+ + Q++ A    +  + L +  +L V+++    
Sbjct: 448 LNKTGLSTLLGILYEDKERQDFIFTIYHWWQAV-AIFTVYLGSSLHMKAKLAVLLVTLVA 506

Query: 425 GTISFFTVEWEAAAFVA 441
             +S+  +E +    VA
Sbjct: 507 AAVSYLRMEQKLRRGVA 523


>gi|225543525 solute carrier organic anion transporter family,
           member 1B1 [Homo sapiens]
          Length = 691

 Score = 33.1 bits (74), Expect = 0.53
 Identities = 28/113 (24%), Positives = 55/113 (48%), Gaps = 17/113 (15%)

Query: 163 QISESDRRTV------FIALTVISLVGTVLFFLI----RKPDSENVLGED----ESSDDQ 208
           +I+ +D R V      F+   + S++ ++ FF +     KP  E          E++D++
Sbjct: 246 RITPTDSRWVGAWWLNFLVSGLFSIISSIPFFFLPQTPNKPQKERKASLSLHVLETNDEK 305

Query: 209 DMEVNESAQN-NLTKAVDAFKKSFKLCVTKEMLLLSITTAYTGLELTFFSGVY 260
           D   N + Q  N+TK V  F +SFK  +T  + ++ +    T L+++ + G +
Sbjct: 306 DQTANLTNQGKNITKNVTGFFQSFKSILTNPLYVMFV--LLTLLQVSSYIGAF 356


>gi|4502415 Burkitt lymphoma receptor 1 isoform 1 [Homo sapiens]
          Length = 372

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 28/98 (28%), Positives = 39/98 (39%), Gaps = 12/98 (12%)

Query: 293 GSLFGLLSKNNRFGRNPVVLLGILVHFIAFY-------LIFLNMPGDAPIAPVKGTDSSA 345
           G +  L     R  R   V + ILV  I F        +IFL+      +A +K  D++ 
Sbjct: 240 GVVHRLRQAQRRPQRQKAVRVAILVTSIFFLCWSPYHIVIFLDT-----LARLKAVDNTC 294

Query: 346 YIKSSKEVAILCSFLLGLGDSCFNTQLLSILGFLYSED 383
            +  S  VAI     LGL   C N  L +  G  +  D
Sbjct: 295 KLNGSLPVAITMCEFLGLAHCCLNPMLYTFAGVKFRSD 332


>gi|14589869 Burkitt lymphoma receptor 1 isoform 2 [Homo sapiens]
          Length = 327

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 28/98 (28%), Positives = 39/98 (39%), Gaps = 12/98 (12%)

Query: 293 GSLFGLLSKNNRFGRNPVVLLGILVHFIAFY-------LIFLNMPGDAPIAPVKGTDSSA 345
           G +  L     R  R   V + ILV  I F        +IFL+      +A +K  D++ 
Sbjct: 195 GVVHRLRQAQRRPQRQKAVRVAILVTSIFFLCWSPYHIVIFLDT-----LARLKAVDNTC 249

Query: 346 YIKSSKEVAILCSFLLGLGDSCFNTQLLSILGFLYSED 383
            +  S  VAI     LGL   C N  L +  G  +  D
Sbjct: 250 KLNGSLPVAITMCEFLGLAHCCLNPMLYTFAGVKFRSD 287


>gi|53828674 olfactory receptor, family 13, subfamily C, member 4
           [Homo sapiens]
          Length = 318

 Score = 30.4 bits (67), Expect = 3.4
 Identities = 27/141 (19%), Positives = 63/141 (44%), Gaps = 5/141 (3%)

Query: 64  LITPSVVAIVGPQLSMFASGLFYSMYIAVFIQPFPWSFYTASVFIGIAAAVLWTAQGNCL 123
           +I   VV ++   +S  + G+  ++  ++ ++   W F   ++       +L   +  C 
Sbjct: 134 IIMNKVVYVLLTSVSWLSGGINSTVQTSLAMR---WPFCGNNIINHFLCEILAVLKLACS 190

Query: 124 TINSDEHSIGRNSGIFWALLQSSLFFGNLYIYFAWQGKTQISESDRR--TVFIALTVISL 181
            I+ +  ++  ++  F  L    +FF  ++I +        +   +   T    LTV+ +
Sbjct: 191 DISVNIVTLAVSNIAFLVLPLLVIFFSYMFILYTILRTNSATGRHKAFSTCSAHLTVVII 250

Query: 182 VGTVLFFLIRKPDSENVLGED 202
               +FF+  KP S+++LG+D
Sbjct: 251 FYGTIFFMYAKPKSQDLLGKD 271


>gi|111378393 sodium channel, voltage-gated, type VII, alpha [Homo
           sapiens]
          Length = 1682

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 3/57 (5%)

Query: 56  YGVFSASNLITPSVVAIVGPQLSMFASGLFYSMYIAVFIQPFPWSFYTASVFIGIAA 112
           + +F+   L+      ++  Q+ ++ASG  Y ++  V    F +SFY AS+F+GI A
Sbjct: 341 WALFALFRLMAQDYPEVLYHQI-LYASGKVYMIFFVVV--SFLFSFYMASLFLGILA 394


>gi|185136021 spinster homolog 2 [Homo sapiens]
          Length = 549

 Score = 29.3 bits (64), Expect = 7.6
 Identities = 37/182 (20%), Positives = 75/182 (41%), Gaps = 30/182 (16%)

Query: 259 VYGTCIGATNKFGAEEKSLIGLSGIFIGIGEILGGSLFGLLSKNNRFGRNPVVLLGILVH 318
           V G  +     FG +++    L  +FI    ++   +FG L   +RF R  ++  GI   
Sbjct: 122 VAGVLLDIQQHFGVKDRGAGLLQSVFI-CSFMVAAPIFGYLG--DRFNRKVILSCGIFFW 178

Query: 319 FIAFYLIFLNMPGDAPIAPVKGTDSSAYIKSSKE-VAILCSFLLGLGDSCFNTQLLSILG 377
                                 T SS++I      + +L   L+G+G++ ++T   +I+G
Sbjct: 179 SAV-------------------TFSSSFIPQQYFWLLVLSRGLVGIGEASYSTIAPTIIG 219

Query: 378 FLYSEDSAP-AFAIFKFVQSICAAVAFFYSNYLL-----LHWQLLVMVIFGFF-GTISFF 430
            L+++++     ++F F   + + + +   + +       HW L V  + G   GT+   
Sbjct: 220 DLFTKNTRTLMLSVFYFAIPLGSGLGYITGSSVKQAAGDWHWALRVSPVLGMITGTLILI 279

Query: 431 TV 432
            V
Sbjct: 280 LV 281


>gi|239755577 PREDICTED: similar to unc-93 homolog B1 (C. elegans)
           [Homo sapiens]
          Length = 312

 Score = 29.3 bits (64), Expect = 7.6
 Identities = 36/154 (23%), Positives = 67/154 (43%), Gaps = 17/154 (11%)

Query: 291 LGGSLFGLLSKNNRFGRNPVVLL-GILVHFIAFYLIFLNMPGDAPIAPVKGTDSSAYIKS 349
           LG S   LL     +   PV L+ G  VH +  +++F         APV      ++I  
Sbjct: 5   LGTSAASLLGLLGLWLPRPVPLVAGAGVHLLLTFILFF-------WAPVPRVLQHSWI-- 55

Query: 350 SKEVAILCSFLLGLGDSCFNTQLLSILGFLYSEDSAP--AFAIFKFVQSICAAVAFFYSN 407
                 + + L G+G +  NT L ++LG LY +       F I+ + Q++ A    +  +
Sbjct: 56  ----LCVAAALWGVGSALNNTGLSTLLGILYKDKERQDFIFTIYHWWQAV-AIFTVYLGS 110

Query: 408 YLLLHWQLLVMVIFGFFGTISFFTVEWEAAAFVA 441
            L +  +L ++++      +S+  +E +    VA
Sbjct: 111 SLHMKAKLAMLLVTLVAAAVSYLRMEQKLRRGVA 144


>gi|239750109 PREDICTED: similar to unc-93 homolog B1 (C. elegans)
           [Homo sapiens]
          Length = 529

 Score = 29.3 bits (64), Expect = 7.6
 Identities = 36/154 (23%), Positives = 67/154 (43%), Gaps = 17/154 (11%)

Query: 291 LGGSLFGLLSKNNRFGRNPVVLL-GILVHFIAFYLIFLNMPGDAPIAPVKGTDSSAYIKS 349
           LG S   LL     +   PV L+ G  VH +  +++F         APV      ++I  
Sbjct: 5   LGTSAASLLGLLGLWLPRPVPLVAGAGVHLLLTFILFF-------WAPVPRVLQHSWI-- 55

Query: 350 SKEVAILCSFLLGLGDSCFNTQLLSILGFLYSEDSAP--AFAIFKFVQSICAAVAFFYSN 407
                 + + L G+G +  NT L ++LG LY +       F I+ + Q++ A    +  +
Sbjct: 56  ----LCVAAALWGVGSALNNTGLSTLLGILYKDKERQDFIFTIYHWWQAV-AIFTVYLGS 110

Query: 408 YLLLHWQLLVMVIFGFFGTISFFTVEWEAAAFVA 441
            L +  +L ++++      +S+  +E +    VA
Sbjct: 111 SLHMKAKLAMLLVTLVAAAVSYLRMEQKLRRGVA 144


>gi|116235487 chromodomain protein, Y-like 2 [Homo sapiens]
          Length = 506

 Score = 29.3 bits (64), Expect = 7.6
 Identities = 28/87 (32%), Positives = 36/87 (41%), Gaps = 14/87 (16%)

Query: 67  PSVVAIVGPQLSMFASGL-------------FYSMYIAVFIQPFPWSFYTASVFIGIAAA 113
           P VVAI GP L + AS L             F + Y  + + P   S YT    +G+A A
Sbjct: 348 PIVVAINGPALGLGASILPLCDIVWASEKAWFQTPYATIRLTPAGCSSYTFPQILGVALA 407

Query: 114 VLWTAQGNCLTINSDEHSIGRNSGIFW 140
                 G  LT   +  S G  S +FW
Sbjct: 408 NEMLFCGRKLTA-QEACSRGLVSQVFW 433


>gi|110825978 DNA-damage regulated autophagy modulator 1 [Homo
           sapiens]
          Length = 238

 Score = 28.9 bits (63), Expect = 9.9
 Identities = 25/88 (28%), Positives = 38/88 (43%), Gaps = 6/88 (6%)

Query: 99  WSFYTASVFIGIAAAVLWTAQGNCLTINSDEHSIGRNSGIFWALLQSSLFFGNLYIYFAW 158
           WS  +A+  I    AVL       L   SD  +    SGIF  ++  S F G   +Y  +
Sbjct: 18  WS--SAAFIISYVVAVLSGHVNPFLPYISDTGTTPPESGIFGFMINFSAFLGAATMYTRY 75

Query: 159 QGKTQISESDRRTVFIALTVISLVGTVL 186
               +I +   +T + +  V +LV  VL
Sbjct: 76  ----KIVQKQNQTCYFSTPVFNLVSLVL 99


>gi|21361834 solute carrier family 22, member 17 isoform a [Homo
           sapiens]
          Length = 538

 Score = 28.9 bits (63), Expect = 9.9
 Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 4/84 (4%)

Query: 303 NRFGRNPVVLLGILVHFIAFYLIFLNMPGDAPIAPVKGTDSSAYIKSSKEVAILCSFLLG 362
           +RFGR  ++LL + +  IA  ++      + PI P          +   E AI    +LG
Sbjct: 360 DRFGRRGILLLSMTLTGIASLVLLGLWDCEHPIFPTVWAQQGNPNRDLNEAAITTFSVLG 419

Query: 363 LGDSCFNTQLLSILGFLYSEDSAP 386
           L    F++Q  +IL  L + +  P
Sbjct: 420 L----FSSQAAAILSTLLAAEVIP 439


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.326    0.140    0.418 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,661,543
Number of Sequences: 37866
Number of extensions: 588155
Number of successful extensions: 1820
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 1802
Number of HSP's gapped (non-prelim): 24
length of query: 449
length of database: 18,247,518
effective HSP length: 106
effective length of query: 343
effective length of database: 14,233,722
effective search space: 4882166646
effective search space used: 4882166646
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 63 (28.9 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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