BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|13236549 major facilitator superfamily domain containing 11 [Homo sapiens] (449 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|13236549 major facilitator superfamily domain containing 11 [... 885 0.0 gi|221139828 unc-93 homolog A isoform 2 [Homo sapiens] 88 2e-17 gi|29336077 unc-93 homolog A isoform 1 [Homo sapiens] 86 7e-17 gi|4502381 BCL2-like 1 isoform 2 [Homo sapiens] 35 0.14 gi|46361976 solute carrier family 37 (glycerol-3-phosphate trans... 34 0.24 gi|45580709 unc-93 homolog B1 [Homo sapiens] 34 0.31 gi|225543525 solute carrier organic anion transporter family, me... 33 0.53 gi|4502415 Burkitt lymphoma receptor 1 isoform 1 [Homo sapiens] 32 1.5 gi|14589869 Burkitt lymphoma receptor 1 isoform 2 [Homo sapiens] 32 1.5 gi|53828674 olfactory receptor, family 13, subfamily C, member 4... 30 3.4 gi|111378393 sodium channel, voltage-gated, type VII, alpha [Hom... 30 4.4 gi|185136021 spinster homolog 2 [Homo sapiens] 29 7.6 gi|239755577 PREDICTED: similar to unc-93 homolog B1 (C. elegans... 29 7.6 gi|239750109 PREDICTED: similar to unc-93 homolog B1 (C. elegans... 29 7.6 gi|116235487 chromodomain protein, Y-like 2 [Homo sapiens] 29 7.6 gi|110825978 DNA-damage regulated autophagy modulator 1 [Homo sa... 29 9.9 gi|21361834 solute carrier family 22, member 17 isoform a [Homo ... 29 9.9 >gi|13236549 major facilitator superfamily domain containing 11 [Homo sapiens] Length = 449 Score = 885 bits (2288), Expect = 0.0 Identities = 449/449 (100%), Positives = 449/449 (100%) Query: 1 MSPESKKLFNIIILGVAFMFMFTAFQTCGNVAQTVIRSLNRTDFHGSGYTSMAIIYGVFS 60 MSPESKKLFNIIILGVAFMFMFTAFQTCGNVAQTVIRSLNRTDFHGSGYTSMAIIYGVFS Sbjct: 1 MSPESKKLFNIIILGVAFMFMFTAFQTCGNVAQTVIRSLNRTDFHGSGYTSMAIIYGVFS 60 Query: 61 ASNLITPSVVAIVGPQLSMFASGLFYSMYIAVFIQPFPWSFYTASVFIGIAAAVLWTAQG 120 ASNLITPSVVAIVGPQLSMFASGLFYSMYIAVFIQPFPWSFYTASVFIGIAAAVLWTAQG Sbjct: 61 ASNLITPSVVAIVGPQLSMFASGLFYSMYIAVFIQPFPWSFYTASVFIGIAAAVLWTAQG 120 Query: 121 NCLTINSDEHSIGRNSGIFWALLQSSLFFGNLYIYFAWQGKTQISESDRRTVFIALTVIS 180 NCLTINSDEHSIGRNSGIFWALLQSSLFFGNLYIYFAWQGKTQISESDRRTVFIALTVIS Sbjct: 121 NCLTINSDEHSIGRNSGIFWALLQSSLFFGNLYIYFAWQGKTQISESDRRTVFIALTVIS 180 Query: 181 LVGTVLFFLIRKPDSENVLGEDESSDDQDMEVNESAQNNLTKAVDAFKKSFKLCVTKEML 240 LVGTVLFFLIRKPDSENVLGEDESSDDQDMEVNESAQNNLTKAVDAFKKSFKLCVTKEML Sbjct: 181 LVGTVLFFLIRKPDSENVLGEDESSDDQDMEVNESAQNNLTKAVDAFKKSFKLCVTKEML 240 Query: 241 LLSITTAYTGLELTFFSGVYGTCIGATNKFGAEEKSLIGLSGIFIGIGEILGGSLFGLLS 300 LLSITTAYTGLELTFFSGVYGTCIGATNKFGAEEKSLIGLSGIFIGIGEILGGSLFGLLS Sbjct: 241 LLSITTAYTGLELTFFSGVYGTCIGATNKFGAEEKSLIGLSGIFIGIGEILGGSLFGLLS 300 Query: 301 KNNRFGRNPVVLLGILVHFIAFYLIFLNMPGDAPIAPVKGTDSSAYIKSSKEVAILCSFL 360 KNNRFGRNPVVLLGILVHFIAFYLIFLNMPGDAPIAPVKGTDSSAYIKSSKEVAILCSFL Sbjct: 301 KNNRFGRNPVVLLGILVHFIAFYLIFLNMPGDAPIAPVKGTDSSAYIKSSKEVAILCSFL 360 Query: 361 LGLGDSCFNTQLLSILGFLYSEDSAPAFAIFKFVQSICAAVAFFYSNYLLLHWQLLVMVI 420 LGLGDSCFNTQLLSILGFLYSEDSAPAFAIFKFVQSICAAVAFFYSNYLLLHWQLLVMVI Sbjct: 361 LGLGDSCFNTQLLSILGFLYSEDSAPAFAIFKFVQSICAAVAFFYSNYLLLHWQLLVMVI 420 Query: 421 FGFFGTISFFTVEWEAAAFVARGSDYRSI 449 FGFFGTISFFTVEWEAAAFVARGSDYRSI Sbjct: 421 FGFFGTISFFTVEWEAAAFVARGSDYRSI 449 >gi|221139828 unc-93 homolog A isoform 2 [Homo sapiens] Length = 415 Score = 87.8 bits (216), Expect = 2e-17 Identities = 95/428 (22%), Positives = 179/428 (41%), Gaps = 71/428 (16%) Query: 6 KKLFNIIILGVAFMFMFTAFQTCGNVAQTVIRSLNRTDFHGSGYTSMAIIYG-VFSASNL 64 + L N++++ F+ +FTA+ ++ ++ G G T+++ +YG + +S Sbjct: 3 RSLRNVLVVSFGFLLLFTAYGGLQSLQSSLYSE------EGLGVTALSTLYGGMLLSSMF 56 Query: 65 ITPSVVAIVGPQLSMFASGLFYSMYIAVFIQPFPWSFYT---ASVFIGIAAAVLWTAQGN 121 + P ++ +G + ++ S Y+A + F S+YT S+ +G+ AA LW+AQ Sbjct: 57 LPPLLIERLGCKGTIILS---MCGYVAFSVGNFFASWYTLIPTSILLGLGAAPLWSAQCT 113 Query: 122 CLTINSDEHS----------IGRNSGIFWALLQSSLFFGNLYIYFAWQGKTQISESDRRT 171 LTI + H+ + + GIF+ + QSS +GNL + G+T S Sbjct: 114 YLTITGNTHAEKAGKRGKDMVNQYFGIFFLIFQSSGVWGNLISSLVF-GQTPSQGSGVLA 172 Query: 172 VFIALTVISLVGTVLFFLIRKPDSENVLGEDESSDDQDMEVNESAQNNLTKAVDAFKKSF 231 V + + + +D++ + +F Sbjct: 173 VLMIAAFLQPI-------------------------RDVQRESEGEKKSVPFWSTLLSTF 207 Query: 232 KLCVTKEMLLLSITTAYTGLELTFFSGVYGTCIGATNKFGAEEKSLIGLSGIFIGIGEIL 291 KL K + LL + Y+GL+ F S Y T T G + +G I + L Sbjct: 208 KLYRDKRLCLLILLPLYSGLQQGFLSSEY-TRSYVTCTLGIQ---FVGYVMICFSATDAL 263 Query: 292 GGSLFGLLSKNNRFGRNPVVLLGILVHFIAFYLIFLNMPGDAPIAPVKGTDSSAYIKSSK 351 L+G +S+ GR + +LG + H + L P +A Sbjct: 264 CSVLYGKVSQYT--GRAVLYVLGAVTHVSCMIALLLWRPRADHLA--------------- 306 Query: 352 EVAILCSFLLGLGDSCFNTQLLSILGFLYSEDSAPAFAIFKFVQSICAAVAFFYSNYLLL 411 V + S L G+ D+ + TQ ++ G L+ + AFA ++ +++ +AF YS +L + Sbjct: 307 -VFFVFSGLWGVADAVWQTQNNALYGVLFEKSKEAAFANYRLWEALGFVIAFGYSMFLCV 365 Query: 412 HWQLLVMV 419 H +L +++ Sbjct: 366 HVKLYILL 373 >gi|29336077 unc-93 homolog A isoform 1 [Homo sapiens] Length = 457 Score = 85.9 bits (211), Expect = 7e-17 Identities = 100/445 (22%), Positives = 188/445 (42%), Gaps = 63/445 (14%) Query: 6 KKLFNIIILGVAFMFMFTAFQTCGNVAQTVIRSLNRTDFHGSGYTSMAIIYG-VFSASNL 64 + L N++++ F+ +FTA+ ++ ++ G G T+++ +YG + +S Sbjct: 3 RSLRNVLVVSFGFLLLFTAYGGLQSLQSSLYSE------EGLGVTALSTLYGGMLLSSMF 56 Query: 65 ITPSVVAIVGPQLSMFASGLFYSMYIAVFIQPFPWSFYT---ASVFIGIAAAVLWTAQGN 121 + P ++ +G + ++ S Y+A + F S+YT S+ +G+ AA LW+AQ Sbjct: 57 LPPLLIERLGCKGTIILS---MCGYVAFSVGNFFASWYTLIPTSILLGLGAAPLWSAQCT 113 Query: 122 CLTINSDEHS----------IGRNSGIFWALLQSSLFFGNLYIYFAWQGKT--------- 162 LTI + H+ + + GIF+ + QSS +GNL + G+T Sbjct: 114 YLTITGNTHAEKAGKRGKDMVNQYFGIFFLIFQSSGVWGNLISSLVF-GQTPSQETLPEE 172 Query: 163 QISESDRRTVFIALTVIS--------LVGTVLFFLIRKPDSENVLGEDESSDDQDMEVNE 214 Q++ +A T + LV T+L ++ +D++ Sbjct: 173 QLTSCGASDCLMATTTTNSTQRPSQQLVYTLLGIYTGSGVLAVLMIAAFLQPIRDVQRES 232 Query: 215 SAQNNLTKAVDAFKKSFKLCVTKEMLLLSITTAYTGLELTFFSGVYGTCIGATNKFGAEE 274 + +FKL K + LL + Y+GL+ F S Y T T G + Sbjct: 233 EGEKKSVPFWSTLLSTFKLYRDKRLCLLILLPLYSGLQQGFLSSEY-TRSYVTCTLGIQ- 290 Query: 275 KSLIGLSGIFIGIGEILGGSLFGLLSKNNRFGRNPVVLLGILVHFIAFYLIFLNMPGDAP 334 +G I + L L+G +S+ GR + +LG + H + L P Sbjct: 291 --FVGYVMICFSATDALCSVLYGKVSQYT--GRAVLYVLGAVTHVSCMIALLLWRPRADH 346 Query: 335 IAPVKGTDSSAYIKSSKEVAILCSFLLGLGDSCFNTQLLSILGFLYSEDSAPAFAIFKFV 394 +A V + S L G+ D+ + TQ ++ G L+ + AFA ++ Sbjct: 347 LA----------------VFFVFSGLWGVADAVWQTQNNALYGVLFEKSKEAAFANYRLW 390 Query: 395 QSICAAVAFFYSNYLLLHWQLLVMV 419 +++ +AF YS +L +H +L +++ Sbjct: 391 EALGFVIAFGYSMFLCVHVKLYILL 415 >gi|4502381 BCL2-like 1 isoform 2 [Homo sapiens] Length = 170 Score = 35.0 bits (79), Expect = 0.14 Identities = 32/122 (26%), Positives = 53/122 (43%), Gaps = 3/122 (2%) Query: 177 TVISLVGTVLFFLIRKPDSENVLGEDESSDDQDMEVNESAQNNLTKAVDAFKKSFKLCVT 236 T ++ G + L P G S D +++ + + L +A D F+ ++ + Sbjct: 47 TPSAINGNPSWHLADSPAVNGATGHSSSLDAREVIPMAAVKQALREAGDEFELRYRRAFS 106 Query: 237 KEMLLLSIT--TAYTGLELTFFSGVYGTCIGATNKFGAEEKSLIGLSGIFIGIGEILGGS 294 L IT TAY E F +YG A ++ G E + L+G+ + G +L GS Sbjct: 107 DLTSQLHITPGTAYQSFEQDTFVELYGNNAAAESRKGQERFNRWFLTGMTVA-GVVLLGS 165 Query: 295 LF 296 LF Sbjct: 166 LF 167 >gi|46361976 solute carrier family 37 (glycerol-3-phosphate transporter), member 3 isoform 1 [Homo sapiens] Length = 494 Score = 34.3 bits (77), Expect = 0.24 Identities = 40/151 (26%), Positives = 71/151 (47%), Gaps = 20/151 (13%) Query: 183 GTVLFF-LIRKPDSENVLG-------EDES--------SDDQDMEVNESAQNNLTKAVDA 226 G V+FF L+ P+ + G E++S ++ + E N S Q++ + A Sbjct: 220 GIVIFFGLLVSPEEIGLSGIEAEENFEEDSHRPLINGGENEDEYEPNYSIQDDSSVAQVK 279 Query: 227 FKKSFKLCVTKEMLLLSITTAYTGLELTFFSGVYGTCIGATNKFGAEEKSLIGLSGIFIG 286 ++ C ++ S+ AY L+L +S + +N FG +E LS I+ Sbjct: 280 AISFYQACCLPGVIPYSL--AYACLKLVNYSFFFWLPFYLSNNFGWKEAEADKLS-IWYD 336 Query: 287 IGEILGGSLFGLLSKNNRFGRNPVVLLGILV 317 +G I+GG+L G +S + R PV+ L +L+ Sbjct: 337 VGGIIGGTLQGFISDVLQ-KRAPVLALSLLL 366 >gi|45580709 unc-93 homolog B1 [Homo sapiens] Length = 597 Score = 33.9 bits (76), Expect = 0.31 Identities = 16/64 (25%), Positives = 34/64 (53%) Query: 61 ASNLITPSVVAIVGPQLSMFASGLFYSMYIAVFIQPFPWSFYTASVFIGIAAAVLWTAQG 120 A+ L TP ++ G + MF + Y+++++ ++ ++V +G+A LW + G Sbjct: 121 AALLYTPVLIRFFGTKWMMFLAVGIYALFVSTNYWERYYTLVPSAVALGMAIVPLWASMG 180 Query: 121 NCLT 124 N +T Sbjct: 181 NYIT 184 Score = 33.5 bits (75), Expect = 0.40 Identities = 45/197 (22%), Positives = 81/197 (41%), Gaps = 25/197 (12%) Query: 248 YTGLELTFFSGVYGTCIGATNKFGAEEKSLIGLSGIFIGIGEILGGSLFGLLSKNNRFGR 307 Y+G E+ F C G +G L L+ + + LG S LL + Sbjct: 349 YSGFEVLF------ACTGIALGYGVCSVGLERLAYLLVAYS--LGASAASLLGLLGLWLP 400 Query: 308 NPVVLL-GILVHFIAFYLIFLNMPGDAPIAPVKGTDSSAYIKSSKEVAILCSFLLGLGDS 366 PV L+ G VH + +++F AP+ V Y+ ++ L G+G + Sbjct: 401 RPVPLVAGAGVHLLLTFILFFW----APVPRVLQHSWILYVAAA---------LWGVGSA 447 Query: 367 CFNTQLLSILGFLYSEDSAP--AFAIFKFVQSICAAVAFFYSNYLLLHWQLLVMVIFGFF 424 T L ++LG LY + F I+ + Q++ A + + L + +L V+++ Sbjct: 448 LNKTGLSTLLGILYEDKERQDFIFTIYHWWQAV-AIFTVYLGSSLHMKAKLAVLLVTLVA 506 Query: 425 GTISFFTVEWEAAAFVA 441 +S+ +E + VA Sbjct: 507 AAVSYLRMEQKLRRGVA 523 >gi|225543525 solute carrier organic anion transporter family, member 1B1 [Homo sapiens] Length = 691 Score = 33.1 bits (74), Expect = 0.53 Identities = 28/113 (24%), Positives = 55/113 (48%), Gaps = 17/113 (15%) Query: 163 QISESDRRTV------FIALTVISLVGTVLFFLI----RKPDSENVLGED----ESSDDQ 208 +I+ +D R V F+ + S++ ++ FF + KP E E++D++ Sbjct: 246 RITPTDSRWVGAWWLNFLVSGLFSIISSIPFFFLPQTPNKPQKERKASLSLHVLETNDEK 305 Query: 209 DMEVNESAQN-NLTKAVDAFKKSFKLCVTKEMLLLSITTAYTGLELTFFSGVY 260 D N + Q N+TK V F +SFK +T + ++ + T L+++ + G + Sbjct: 306 DQTANLTNQGKNITKNVTGFFQSFKSILTNPLYVMFV--LLTLLQVSSYIGAF 356 >gi|4502415 Burkitt lymphoma receptor 1 isoform 1 [Homo sapiens] Length = 372 Score = 31.6 bits (70), Expect = 1.5 Identities = 28/98 (28%), Positives = 39/98 (39%), Gaps = 12/98 (12%) Query: 293 GSLFGLLSKNNRFGRNPVVLLGILVHFIAFY-------LIFLNMPGDAPIAPVKGTDSSA 345 G + L R R V + ILV I F +IFL+ +A +K D++ Sbjct: 240 GVVHRLRQAQRRPQRQKAVRVAILVTSIFFLCWSPYHIVIFLDT-----LARLKAVDNTC 294 Query: 346 YIKSSKEVAILCSFLLGLGDSCFNTQLLSILGFLYSED 383 + S VAI LGL C N L + G + D Sbjct: 295 KLNGSLPVAITMCEFLGLAHCCLNPMLYTFAGVKFRSD 332 >gi|14589869 Burkitt lymphoma receptor 1 isoform 2 [Homo sapiens] Length = 327 Score = 31.6 bits (70), Expect = 1.5 Identities = 28/98 (28%), Positives = 39/98 (39%), Gaps = 12/98 (12%) Query: 293 GSLFGLLSKNNRFGRNPVVLLGILVHFIAFY-------LIFLNMPGDAPIAPVKGTDSSA 345 G + L R R V + ILV I F +IFL+ +A +K D++ Sbjct: 195 GVVHRLRQAQRRPQRQKAVRVAILVTSIFFLCWSPYHIVIFLDT-----LARLKAVDNTC 249 Query: 346 YIKSSKEVAILCSFLLGLGDSCFNTQLLSILGFLYSED 383 + S VAI LGL C N L + G + D Sbjct: 250 KLNGSLPVAITMCEFLGLAHCCLNPMLYTFAGVKFRSD 287 >gi|53828674 olfactory receptor, family 13, subfamily C, member 4 [Homo sapiens] Length = 318 Score = 30.4 bits (67), Expect = 3.4 Identities = 27/141 (19%), Positives = 63/141 (44%), Gaps = 5/141 (3%) Query: 64 LITPSVVAIVGPQLSMFASGLFYSMYIAVFIQPFPWSFYTASVFIGIAAAVLWTAQGNCL 123 +I VV ++ +S + G+ ++ ++ ++ W F ++ +L + C Sbjct: 134 IIMNKVVYVLLTSVSWLSGGINSTVQTSLAMR---WPFCGNNIINHFLCEILAVLKLACS 190 Query: 124 TINSDEHSIGRNSGIFWALLQSSLFFGNLYIYFAWQGKTQISESDRR--TVFIALTVISL 181 I+ + ++ ++ F L +FF ++I + + + T LTV+ + Sbjct: 191 DISVNIVTLAVSNIAFLVLPLLVIFFSYMFILYTILRTNSATGRHKAFSTCSAHLTVVII 250 Query: 182 VGTVLFFLIRKPDSENVLGED 202 +FF+ KP S+++LG+D Sbjct: 251 FYGTIFFMYAKPKSQDLLGKD 271 >gi|111378393 sodium channel, voltage-gated, type VII, alpha [Homo sapiens] Length = 1682 Score = 30.0 bits (66), Expect = 4.4 Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 3/57 (5%) Query: 56 YGVFSASNLITPSVVAIVGPQLSMFASGLFYSMYIAVFIQPFPWSFYTASVFIGIAA 112 + +F+ L+ ++ Q+ ++ASG Y ++ V F +SFY AS+F+GI A Sbjct: 341 WALFALFRLMAQDYPEVLYHQI-LYASGKVYMIFFVVV--SFLFSFYMASLFLGILA 394 >gi|185136021 spinster homolog 2 [Homo sapiens] Length = 549 Score = 29.3 bits (64), Expect = 7.6 Identities = 37/182 (20%), Positives = 75/182 (41%), Gaps = 30/182 (16%) Query: 259 VYGTCIGATNKFGAEEKSLIGLSGIFIGIGEILGGSLFGLLSKNNRFGRNPVVLLGILVH 318 V G + FG +++ L +FI ++ +FG L +RF R ++ GI Sbjct: 122 VAGVLLDIQQHFGVKDRGAGLLQSVFI-CSFMVAAPIFGYLG--DRFNRKVILSCGIFFW 178 Query: 319 FIAFYLIFLNMPGDAPIAPVKGTDSSAYIKSSKE-VAILCSFLLGLGDSCFNTQLLSILG 377 T SS++I + +L L+G+G++ ++T +I+G Sbjct: 179 SAV-------------------TFSSSFIPQQYFWLLVLSRGLVGIGEASYSTIAPTIIG 219 Query: 378 FLYSEDSAP-AFAIFKFVQSICAAVAFFYSNYLL-----LHWQLLVMVIFGFF-GTISFF 430 L+++++ ++F F + + + + + + HW L V + G GT+ Sbjct: 220 DLFTKNTRTLMLSVFYFAIPLGSGLGYITGSSVKQAAGDWHWALRVSPVLGMITGTLILI 279 Query: 431 TV 432 V Sbjct: 280 LV 281 >gi|239755577 PREDICTED: similar to unc-93 homolog B1 (C. elegans) [Homo sapiens] Length = 312 Score = 29.3 bits (64), Expect = 7.6 Identities = 36/154 (23%), Positives = 67/154 (43%), Gaps = 17/154 (11%) Query: 291 LGGSLFGLLSKNNRFGRNPVVLL-GILVHFIAFYLIFLNMPGDAPIAPVKGTDSSAYIKS 349 LG S LL + PV L+ G VH + +++F APV ++I Sbjct: 5 LGTSAASLLGLLGLWLPRPVPLVAGAGVHLLLTFILFF-------WAPVPRVLQHSWI-- 55 Query: 350 SKEVAILCSFLLGLGDSCFNTQLLSILGFLYSEDSAP--AFAIFKFVQSICAAVAFFYSN 407 + + L G+G + NT L ++LG LY + F I+ + Q++ A + + Sbjct: 56 ----LCVAAALWGVGSALNNTGLSTLLGILYKDKERQDFIFTIYHWWQAV-AIFTVYLGS 110 Query: 408 YLLLHWQLLVMVIFGFFGTISFFTVEWEAAAFVA 441 L + +L ++++ +S+ +E + VA Sbjct: 111 SLHMKAKLAMLLVTLVAAAVSYLRMEQKLRRGVA 144 >gi|239750109 PREDICTED: similar to unc-93 homolog B1 (C. elegans) [Homo sapiens] Length = 529 Score = 29.3 bits (64), Expect = 7.6 Identities = 36/154 (23%), Positives = 67/154 (43%), Gaps = 17/154 (11%) Query: 291 LGGSLFGLLSKNNRFGRNPVVLL-GILVHFIAFYLIFLNMPGDAPIAPVKGTDSSAYIKS 349 LG S LL + PV L+ G VH + +++F APV ++I Sbjct: 5 LGTSAASLLGLLGLWLPRPVPLVAGAGVHLLLTFILFF-------WAPVPRVLQHSWI-- 55 Query: 350 SKEVAILCSFLLGLGDSCFNTQLLSILGFLYSEDSAP--AFAIFKFVQSICAAVAFFYSN 407 + + L G+G + NT L ++LG LY + F I+ + Q++ A + + Sbjct: 56 ----LCVAAALWGVGSALNNTGLSTLLGILYKDKERQDFIFTIYHWWQAV-AIFTVYLGS 110 Query: 408 YLLLHWQLLVMVIFGFFGTISFFTVEWEAAAFVA 441 L + +L ++++ +S+ +E + VA Sbjct: 111 SLHMKAKLAMLLVTLVAAAVSYLRMEQKLRRGVA 144 >gi|116235487 chromodomain protein, Y-like 2 [Homo sapiens] Length = 506 Score = 29.3 bits (64), Expect = 7.6 Identities = 28/87 (32%), Positives = 36/87 (41%), Gaps = 14/87 (16%) Query: 67 PSVVAIVGPQLSMFASGL-------------FYSMYIAVFIQPFPWSFYTASVFIGIAAA 113 P VVAI GP L + AS L F + Y + + P S YT +G+A A Sbjct: 348 PIVVAINGPALGLGASILPLCDIVWASEKAWFQTPYATIRLTPAGCSSYTFPQILGVALA 407 Query: 114 VLWTAQGNCLTINSDEHSIGRNSGIFW 140 G LT + S G S +FW Sbjct: 408 NEMLFCGRKLTA-QEACSRGLVSQVFW 433 >gi|110825978 DNA-damage regulated autophagy modulator 1 [Homo sapiens] Length = 238 Score = 28.9 bits (63), Expect = 9.9 Identities = 25/88 (28%), Positives = 38/88 (43%), Gaps = 6/88 (6%) Query: 99 WSFYTASVFIGIAAAVLWTAQGNCLTINSDEHSIGRNSGIFWALLQSSLFFGNLYIYFAW 158 WS +A+ I AVL L SD + SGIF ++ S F G +Y + Sbjct: 18 WS--SAAFIISYVVAVLSGHVNPFLPYISDTGTTPPESGIFGFMINFSAFLGAATMYTRY 75 Query: 159 QGKTQISESDRRTVFIALTVISLVGTVL 186 +I + +T + + V +LV VL Sbjct: 76 ----KIVQKQNQTCYFSTPVFNLVSLVL 99 >gi|21361834 solute carrier family 22, member 17 isoform a [Homo sapiens] Length = 538 Score = 28.9 bits (63), Expect = 9.9 Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 4/84 (4%) Query: 303 NRFGRNPVVLLGILVHFIAFYLIFLNMPGDAPIAPVKGTDSSAYIKSSKEVAILCSFLLG 362 +RFGR ++LL + + IA ++ + PI P + E AI +LG Sbjct: 360 DRFGRRGILLLSMTLTGIASLVLLGLWDCEHPIFPTVWAQQGNPNRDLNEAAITTFSVLG 419 Query: 363 LGDSCFNTQLLSILGFLYSEDSAP 386 L F++Q +IL L + + P Sbjct: 420 L----FSSQAAAILSTLLAAEVIP 439 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.326 0.140 0.418 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 14,661,543 Number of Sequences: 37866 Number of extensions: 588155 Number of successful extensions: 1820 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 6 Number of HSP's successfully gapped in prelim test: 11 Number of HSP's that attempted gapping in prelim test: 1802 Number of HSP's gapped (non-prelim): 24 length of query: 449 length of database: 18,247,518 effective HSP length: 106 effective length of query: 343 effective length of database: 14,233,722 effective search space: 4882166646 effective search space used: 4882166646 T: 11 A: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.7 bits) S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.