Guide to the Human Genome
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Name: BID Sequence: fasta or formatted (195aa) NCBI GI: 4557361
Description:

BH3 interacting domain death agonist isoform 2

Referenced in:

BCL2 Pathways, Caspases, and Programmed Cell Death

Other entries for this name:
alt prot [241aa] BH3 interacting domain death agonist isoform 1
alt prot [99aa] BH3 interacting domain death agonist isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.7         13           1
 C cysteine            1.5          3           1
 D aspartate           7.7         15           1
 E glutamate           7.2         14           2
 F phenylalanine       2.6          5           1
 G glycine             5.1         10           1
 H histidine           2.6          5           1
 I isoleucine          3.6          7           2
 K lysine              2.1          4           2
 L leucine            14.4         28           3
 M methionine          2.6          5           1
 N asparagine          6.7         13           2
 P proline             3.1          6           2
 Q glutamine           4.6          9           1
 R arginine            9.2         18           2
 S serine              8.7         17           2
 T threonine           4.6          9           2
 V valine              5.1         10           1
 W tryptophan          0.5          1           1
 Y tyrosine            1.5          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   BH3 interacting domain death agonist isoform 2 
BID                   1.000   BH3 interacting domain death agonist isoform 1 [Homo...
BID                   0.467   BH3 interacting domain death agonist isoform 3 [Homo...
PDP2                  0.017   pyruvate dehydrogenase phosphatase isoenzyme 2 [Homo...
PHKB                  0.017   phosphorylase kinase, beta isoform b 
IMMT                  0.017   inner membrane protein, mitochondrial isoform 3 [Ho...
IMMT                  0.017   inner membrane protein, mitochondrial isoform 2 [Ho...
IMMT                  0.017   inner membrane protein, mitochondrial isoform 1 [Ho...
OIT3                  0.014   oncoprotein-induced transcript 3 
FGFR1OP2              0.014   FGFR1 oncogene partner 2 
PAWR                  0.014   PRKC, apoptosis, WT1, regulator 
GOLGA4                0.014   golgi autoantigen, golgin subfamily a, 4 
KIAA1602              0.011   hypothetical protein LOC57701 
MLLT4                 0.011   myeloid/lymphoid or mixed-lineage leukemia (trithora...
MLLT4                 0.011   myeloid/lymphoid or mixed-lineage leukemia (trithora...
MLLT4                 0.011   myeloid/lymphoid or mixed-lineage leukemia (trithora...
ANLN                  0.011   anillin, actin binding protein 
XPO1                  0.008   exportin 1 
CCDC57                0.008   coiled-coil domain containing 57 
DEF6                  0.008   differentially expressed in FDCP 6 homolog 
CGN                   0.008   cingulin 
SKI                   0.008   v-ski sarcoma viral oncogene homolog 
PCNT                  0.008   pericentrin 
FILIP1                0.008   filamin A interacting protein 1 
IQGAP3                0.008   IQ motif containing GTPase activating protein 3 [Hom...
MYT1                  0.006   myelin transcription factor 1 
JAKMIP2               0.006   Janus kinase and microtubule interacting protein 2 [...
NCAPD3                0.006   non-SMC condensin II complex, subunit D3 
PPFIA1                0.006   PTPRF interacting protein alpha 1 isoform a 
PPFIA1                0.006   PTPRF interacting protein alpha 1 isoform b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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