Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: YARS Sequence: fasta or formatted (528aa) NCBI GI: 4507947
Description:

tyrosyl-tRNA synthetase

Referenced in:

Domain Structure of Proteins
tRNA Enzymes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.2         33           2
 C cysteine            1.1          6           1
 D aspartate           5.1         27           1
 E glutamate           9.7         51           3
 F phenylalanine       3.4         18           1
 G glycine             6.4         34           2
 H histidine           1.9         10           1
 I isoleucine          4.7         25           2
 K lysine             11.6         61           3
 L leucine            11.2         59           2
 M methionine          2.1         11           1
 N asparagine          3.0         16           2
 P proline             6.1         32           2
 Q glutamine           3.2         17           1
 R arginine            2.8         15           1
 S serine              6.1         32           3
 T threonine           3.2         17           2
 V valine              8.1         43           3
 W tryptophan          0.8          4           1
 Y tyrosine            3.2         17           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   tyrosyl-tRNA synthetase 
AIMP1                 0.141   small inducible cytokine subfamily E, member 1 isof...
AIMP1                 0.141   small inducible cytokine subfamily E, member 1 isof...
AIMP1                 0.141   small inducible cytokine subfamily E, member 1 isofo...
WARS                  0.014   tryptophanyl-tRNA synthetase isoform b 
WARS                  0.014   tryptophanyl-tRNA synthetase isoform b 
WARS                  0.014   tryptophanyl-tRNA synthetase isoform a 
WARS                  0.014   tryptophanyl-tRNA synthetase isoform a 
BCAS1                 0.011   breast carcinoma amplified sequence 1 
TTN                   0.010   titin isoform N2-A 
ATR                   0.008   ataxia telangiectasia and Rad3 related protein [Hom...
LOC651921             0.008   PREDICTED: similar to ataxia telangiectasia and Rad...
SYTL2                 0.007   synaptotagmin-like 2 isoform d 
SYTL2                 0.007   synaptotagmin-like 2 isoform c 
AP2A1                 0.007   adaptor-related protein complex 2, alpha 1 subunit i...
AP2A1                 0.007   adaptor-related protein complex 2, alpha 1 subunit i...
ALDH1A1               0.007   aldehyde dehydrogenase 1A1 
UBE2O                 0.006   ubiquitin-conjugating enzyme E2O 
SIRPB1                0.005   signal-regulatory protein beta 1 isoform 1 precurso...
SIRPB1                0.005   signal-regulatory protein beta 1 isoform 2 precurso...
SIRPB1                0.005   signal-regulatory protein beta 1 isoform 3 precurso...
MAML1                 0.005   mastermind-like 1 
LOC100292102          0.005   PREDICTED: hypothetical protein XP_002346214 
LOC100291247          0.005   PREDICTED: hypothetical protein XP_002347102 
BOD1L                 0.004   biorientation of chromosomes in cell division 1-like...
SGK3                  0.004   serum/glucocorticoid regulated kinase 3 isoform 2 [H...
SGK3                  0.004   serum/glucocorticoid regulated kinase 3 isoform 1 [H...
SGK3                  0.004   serum/glucocorticoid regulated kinase 3 isoform 1 [H...
PCDHAC1               0.004   protocadherin alpha subfamily C, 1 isoform 1 precurs...
PCDHAC1               0.004   protocadherin alpha subfamily C, 1 isoform 2 precurs...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press