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Search of human proteins with 4506261
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4506261 prostaglandin F receptor isoform a precursor [Homo
sapiens]
(359 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4506261 prostaglandin F receptor isoform a precursor [Homo sa... 714 0.0
gi|88758606 prostaglandin F receptor isoform b precursor [Homo s... 531 e-151
gi|38505194 prostaglandin E receptor 1, subtype EP1 [Homo sapiens] 224 9e-59
gi|38505180 prostaglandin E receptor 3, subtype EP3 isoform 5 [H... 199 4e-51
gi|89276764 prostaglandin E receptor 3, subtype EP3 isoform 2 [H... 197 1e-50
gi|38505188 prostaglandin E receptor 3, subtype EP3 isoform 4 [H... 197 1e-50
gi|38505186 prostaglandin E receptor 3, subtype EP3 isoform 8 [H... 197 1e-50
gi|38505182 prostaglandin E receptor 3, subtype EP3 isoform 6 [H... 197 1e-50
gi|38505178 prostaglandin E receptor 3, subtype EP3 isoform 4 [H... 197 1e-50
gi|38505172 prostaglandin E receptor 3, subtype EP3 isoform 1 [H... 197 1e-50
gi|186659506 prostaglandin E receptor 3, subtype EP3 isoform 4 [... 197 1e-50
gi|38505184 prostaglandin E receptor 3, subtype EP3 isoform 7 [H... 197 2e-50
gi|38505176 prostaglandin E receptor 3, subtype EP3 isoform 3 [H... 197 2e-50
gi|4507381 thromboxane A2 receptor [Homo sapiens] 189 3e-48
gi|4506263 prostaglandin I2 (prostacyclin) receptor (IP) [Homo s... 110 2e-24
gi|31881630 prostaglandin E receptor 2 (subtype EP2), 53kDa [Hom... 100 3e-21
gi|4506259 prostaglandin E receptor 4, subtype EP4 [Homo sapiens] 90 3e-18
gi|28466969 prostaglandin D2 receptor [Homo sapiens] 83 4e-16
gi|5729798 cysteinyl leukotriene receptor 1 [Homo sapiens] 57 3e-08
gi|34577052 coagulation factor II (thrombin) receptor-like 1 pre... 57 3e-08
gi|4826706 EBV-induced G protein-coupled receptor 2 [Homo sapiens] 56 4e-08
gi|71999131 opsin 3 [Homo sapiens] 54 2e-07
gi|4758326 coagulation factor II (thrombin) receptor-like 2 prec... 52 6e-07
gi|4506241 platelet-activating factor receptor [Homo sapiens] 50 2e-06
gi|5730019 peropsin [Homo sapiens] 50 3e-06
gi|4885311 lysophosphatidic acid receptor 4 [Homo sapiens] 50 4e-06
gi|29029605 purinergic receptor P2Y12 [Homo sapiens] 49 5e-06
gi|12232483 purinergic receptor P2Y12 [Homo sapiens] 49 5e-06
gi|4502387 opsin 1 (cone pigments), short-wave-sensitive [Homo s... 49 5e-06
gi|157426873 tachykinin receptor 2 [Homo sapiens] 48 1e-05
>gi|4506261 prostaglandin F receptor isoform a precursor [Homo
sapiens]
Length = 359
Score = 714 bits (1844), Expect = 0.0
Identities = 359/359 (100%), Positives = 359/359 (100%)
Query: 1 MSMNNSKQLVSPAAALLSNTTCQTENRLSVFFSVIFMTVGILSNSLAIAILMKAYQRFRQ 60
MSMNNSKQLVSPAAALLSNTTCQTENRLSVFFSVIFMTVGILSNSLAIAILMKAYQRFRQ
Sbjct: 1 MSMNNSKQLVSPAAALLSNTTCQTENRLSVFFSVIFMTVGILSNSLAIAILMKAYQRFRQ 60
Query: 61 KSKASFLLLASGLVITDFFGHLINGAIAVFVYASDKEWIRFDQSNVLCSIFGICMVFSGL 120
KSKASFLLLASGLVITDFFGHLINGAIAVFVYASDKEWIRFDQSNVLCSIFGICMVFSGL
Sbjct: 61 KSKASFLLLASGLVITDFFGHLINGAIAVFVYASDKEWIRFDQSNVLCSIFGICMVFSGL 120
Query: 121 CPLLLGSVMAIERCIGVTKPIFHSTKITSKHVKMMLSGVCLFAVFIALLPILGHRDYKIQ 180
CPLLLGSVMAIERCIGVTKPIFHSTKITSKHVKMMLSGVCLFAVFIALLPILGHRDYKIQ
Sbjct: 121 CPLLLGSVMAIERCIGVTKPIFHSTKITSKHVKMMLSGVCLFAVFIALLPILGHRDYKIQ 180
Query: 181 ASRTWCFYNTEDIKDWEDRFYLLLFSFLGLLALGVSLLCNAITGITLLRVKFKSQQHRQG 240
ASRTWCFYNTEDIKDWEDRFYLLLFSFLGLLALGVSLLCNAITGITLLRVKFKSQQHRQG
Sbjct: 181 ASRTWCFYNTEDIKDWEDRFYLLLFSFLGLLALGVSLLCNAITGITLLRVKFKSQQHRQG 240
Query: 241 RSHHLEMVIQLLAIMCVSCICWSPFLVTMANIGINGNHSLETCETTLFALRMATWNQILD 300
RSHHLEMVIQLLAIMCVSCICWSPFLVTMANIGINGNHSLETCETTLFALRMATWNQILD
Sbjct: 241 RSHHLEMVIQLLAIMCVSCICWSPFLVTMANIGINGNHSLETCETTLFALRMATWNQILD 300
Query: 301 PWVYILLRKAVLKNLYKLASQCCGVHVISLHIWELSSIKNSLKVAAISESPVAEKSAST 359
PWVYILLRKAVLKNLYKLASQCCGVHVISLHIWELSSIKNSLKVAAISESPVAEKSAST
Sbjct: 301 PWVYILLRKAVLKNLYKLASQCCGVHVISLHIWELSSIKNSLKVAAISESPVAEKSAST 359
>gi|88758606 prostaglandin F receptor isoform b precursor [Homo
sapiens]
Length = 297
Score = 531 bits (1369), Expect = e-151
Identities = 272/295 (92%), Positives = 274/295 (92%), Gaps = 2/295 (0%)
Query: 1 MSMNNSKQLVSPAAALLSNTTCQTENRLSVFFSVIFMTVGILSNSLAIAILMKAYQRFRQ 60
MSMNNSKQLVSPAAALLSNTTCQTENRLSVFFSVIFMTVGILSNSLAIAILMKAYQRFRQ
Sbjct: 1 MSMNNSKQLVSPAAALLSNTTCQTENRLSVFFSVIFMTVGILSNSLAIAILMKAYQRFRQ 60
Query: 61 KSKASFLLLASGLVITDFFGHLINGAIAVFVYASDKEWIRFDQSNVLCSIFGICMVFSGL 120
KSKASFLLLASGLVITDFFGHLINGAIAVFVYASDKEWIRFDQSNVLCSIFGICMVFSGL
Sbjct: 61 KSKASFLLLASGLVITDFFGHLINGAIAVFVYASDKEWIRFDQSNVLCSIFGICMVFSGL 120
Query: 121 CPLLLGSVMAIERCIGVTKPIFHSTKITSKHVKMMLSGVCLFAVFIALLPILGHRDYKIQ 180
CPLLLGSVMAIERCIGVTKPIFHSTKITSKHVKMMLSGVCLFAVFIALLPILGHRDYKIQ
Sbjct: 121 CPLLLGSVMAIERCIGVTKPIFHSTKITSKHVKMMLSGVCLFAVFIALLPILGHRDYKIQ 180
Query: 181 ASRTWCFYNTEDIKDWEDRFYLLLFSFLGLLALGVSLLCNAITGITLLRVKFKSQQHRQG 240
ASRTWCFYNTEDIKDWEDRFYLLLFSFLGLLALGVSLLCNAITGITLLRVKFKSQQHRQG
Sbjct: 181 ASRTWCFYNTEDIKDWEDRFYLLLFSFLGLLALGVSLLCNAITGITLLRVKFKSQQHRQG 240
Query: 241 RSHHLEMVIQLLAIMCVSCICWSPFLVTMANIGINGNHSLETCETTLFALRMATW 295
RSHHLEMVIQLLAIMCVSCICWSPFL I +NG + E L W
Sbjct: 241 RSHHLEMVIQLLAIMCVSCICWSPFL--GYRIILNGKEKYKVYEEQSDFLHRLQW 293
>gi|38505194 prostaglandin E receptor 1, subtype EP1 [Homo sapiens]
Length = 402
Score = 224 bits (571), Expect = 9e-59
Identities = 135/394 (34%), Positives = 207/394 (52%), Gaps = 59/394 (14%)
Query: 1 MSMNNSKQLVSPAAALLSNTTCQTENRLSVFFSVIFMTVGILSNSLAIAILMKAYQRFRQ 60
++++ + + + AA + NT+ + S + MT+G +SN LA+A+L +A R R+
Sbjct: 7 LNLSLAGEATTCAAPWVPNTSAVPPSGASPALPIFSMTLGAVSNLLALALLAQAAGRLRR 66
Query: 61 K-SKASFLLLASGLVITDFFGHLINGAIAVFVYASDKEWIRFDQSNVLCSIFGICMVFSG 119
+ S A+FLL + L+ TD GH+I GA+ + +Y + + + C G CMVF G
Sbjct: 67 RRSAATFLLFVASLLATDLAGHVIPGALVLRLYTAGRA-----PAGGACHFLGGCMVFFG 121
Query: 120 LCPLLLGSVMAIERCIGVTKPIFHSTKITSKHVKMMLSGVCLFAVFIALLPILGHRDYKI 179
LCPLLLG MA+ERC+GVT+P+ H+ +++ ++ L+ V A+ +ALLP+ Y++
Sbjct: 122 LCPLLLGCGMAVERCVGVTRPLLHAARVSVARARLALAAVAAVALAVALLPLARVGRYEL 181
Query: 180 QASRTWCFYNTEDIKDWEDRFYLLLFSFLGLLALGVSLLCNAITGITLLRVKFK------ 233
Q TWCF W LF+ LGL+AL +L+CN ++G+ LLR +++
Sbjct: 182 QYPGTWCFIGLGPPGGWRQALLAGLFASLGLVALLAALVCNTLSGLALLRARWRRRSRRP 241
Query: 234 ----------------------------------------SQQHRQGRSHHLEMVIQLLA 253
S R+ R+H +EMV QL+
Sbjct: 242 PPASGPDSRRRWGAHGPRSASASSASSIASASTFFGGSRSSGSARRARAHDVEMVGQLVG 301
Query: 254 IMCVSCICWSPFLVTMANIGINGNHSLETCETTLFALRMATWNQILDPWVYILLRKAVLK 313
IM VSCICWSP LV +A + + G S A+R+A+WNQILDPWVYILLR+AVL+
Sbjct: 302 IMVVSCICWSPMLVLVA-LAVGGWSSTSLQRPLFLAVRLASWNQILDPWVYILLRQAVLR 360
Query: 314 NLYKLASQCCGVH------VISLHIWELSSIKNS 341
L +L G ++ WE SS+++S
Sbjct: 361 QLLRLLPPRAGAKGGPAGLGLTPSAWEASSLRSS 394
>gi|38505180 prostaglandin E receptor 3, subtype EP3 isoform 5 [Homo
sapiens]
Length = 388
Score = 199 bits (505), Expect = 4e-51
Identities = 115/314 (36%), Positives = 172/314 (54%), Gaps = 22/314 (7%)
Query: 28 LSVFFSVIFMTVGILSNSLAIAILMKAYQRFRQKSKASFLLLASGLVITDFFGHLINGAI 87
+SV F + + G + N+LA+ ++ ++Y+R K K SFLL L +TD G L+ +
Sbjct: 50 VSVAFPITMLLTGFVGNALAMLLVSRSYRRRESKRKKSFLLCIGWLALTDLVGQLLTTPV 109
Query: 88 AVFVYASDKEWIRFDQSNVLCSIFGICMVFSGLCPLLLGSVMAIERCIGVTKPIFHSTKI 147
+ VY S + W D S LC+ FG+ M GL L + S MA+ER + + P ++++ +
Sbjct: 110 VIVVYLSKQRWEHIDPSGRLCTFFGLTMTVFGLSSLFIASAMAVERALAIRAPHWYASHM 169
Query: 148 TSKHVKMMLSGVCLFAVFIALLPILGHRDYKIQASRTWCFYN-------TEDIKDWEDRF 200
++ + +L GV L + ALLP+LG Y +Q TWCF + T +W + F
Sbjct: 170 KTRATRAVLLGVWLAVLAFALLPVLGVGQYTVQWPGTWCFISTGRGGNGTSSSHNWGNLF 229
Query: 201 YLLLFSFLGLLALGVSLLCNAITGITLL-RVKFK---SQQHRQGRSHHLEMVIQLLAIMC 256
+ F+FLGLLAL V+ CN T L+ R + K SQ Q E IQL+ IMC
Sbjct: 230 FASAFAFLGLLALTVTFSCNLATIKALVSRCRAKATASQSSAQWGRITTETAIQLMGIMC 289
Query: 257 VSCICWSPFLVTMANIGINGNHSLETCET----------TLFALRMATWNQILDPWVYIL 306
V +CWSP L+ M + N S+E C+T L A+R+A+ NQILDPWVY+L
Sbjct: 290 VLSVCWSPLLIMMLKMIFN-QTSVEHCKTHTEKQKECNFFLIAVRLASLNQILDPWVYLL 348
Query: 307 LRKAVLKNLYKLAS 320
LRK +L+ ++A+
Sbjct: 349 LRKILLRKFCQVAN 362
>gi|89276764 prostaglandin E receptor 3, subtype EP3 isoform 2 [Homo
sapiens]
Length = 402
Score = 197 bits (501), Expect = 1e-50
Identities = 114/312 (36%), Positives = 170/312 (54%), Gaps = 22/312 (7%)
Query: 28 LSVFFSVIFMTVGILSNSLAIAILMKAYQRFRQKSKASFLLLASGLVITDFFGHLINGAI 87
+SV F + + G + N+LA+ ++ ++Y+R K K SFLL L +TD G L+ +
Sbjct: 50 VSVAFPITMLLTGFVGNALAMLLVSRSYRRRESKRKKSFLLCIGWLALTDLVGQLLTTPV 109
Query: 88 AVFVYASDKEWIRFDQSNVLCSIFGICMVFSGLCPLLLGSVMAIERCIGVTKPIFHSTKI 147
+ VY S + W D S LC+ FG+ M GL L + S MA+ER + + P ++++ +
Sbjct: 110 VIVVYLSKQRWEHIDPSGRLCTFFGLTMTVFGLSSLFIASAMAVERALAIRAPHWYASHM 169
Query: 148 TSKHVKMMLSGVCLFAVFIALLPILGHRDYKIQASRTWCFYN-------TEDIKDWEDRF 200
++ + +L GV L + ALLP+LG Y +Q TWCF + T +W + F
Sbjct: 170 KTRATRAVLLGVWLAVLAFALLPVLGVGQYTVQWPGTWCFISTGRGGNGTSSSHNWGNLF 229
Query: 201 YLLLFSFLGLLALGVSLLCNAITGITLL-RVKFK---SQQHRQGRSHHLEMVIQLLAIMC 256
+ F+FLGLLAL V+ CN T L+ R + K SQ Q E IQL+ IMC
Sbjct: 230 FASAFAFLGLLALTVTFSCNLATIKALVSRCRAKATASQSSAQWGRITTETAIQLMGIMC 289
Query: 257 VSCICWSPFLVTMANIGINGNHSLETCET----------TLFALRMATWNQILDPWVYIL 306
V +CWSP L+ M + N S+E C+T L A+R+A+ NQILDPWVY+L
Sbjct: 290 VLSVCWSPLLIMMLKMIFN-QTSVEHCKTHTEKQKECNFFLIAVRLASLNQILDPWVYLL 348
Query: 307 LRKAVLKNLYKL 318
LRK +L+ ++
Sbjct: 349 LRKILLRKFCQM 360
>gi|38505188 prostaglandin E receptor 3, subtype EP3 isoform 4 [Homo
sapiens]
Length = 390
Score = 197 bits (501), Expect = 1e-50
Identities = 114/312 (36%), Positives = 170/312 (54%), Gaps = 22/312 (7%)
Query: 28 LSVFFSVIFMTVGILSNSLAIAILMKAYQRFRQKSKASFLLLASGLVITDFFGHLINGAI 87
+SV F + + G + N+LA+ ++ ++Y+R K K SFLL L +TD G L+ +
Sbjct: 50 VSVAFPITMLLTGFVGNALAMLLVSRSYRRRESKRKKSFLLCIGWLALTDLVGQLLTTPV 109
Query: 88 AVFVYASDKEWIRFDQSNVLCSIFGICMVFSGLCPLLLGSVMAIERCIGVTKPIFHSTKI 147
+ VY S + W D S LC+ FG+ M GL L + S MA+ER + + P ++++ +
Sbjct: 110 VIVVYLSKQRWEHIDPSGRLCTFFGLTMTVFGLSSLFIASAMAVERALAIRAPHWYASHM 169
Query: 148 TSKHVKMMLSGVCLFAVFIALLPILGHRDYKIQASRTWCFYN-------TEDIKDWEDRF 200
++ + +L GV L + ALLP+LG Y +Q TWCF + T +W + F
Sbjct: 170 KTRATRAVLLGVWLAVLAFALLPVLGVGQYTVQWPGTWCFISTGRGGNGTSSSHNWGNLF 229
Query: 201 YLLLFSFLGLLALGVSLLCNAITGITLL-RVKFK---SQQHRQGRSHHLEMVIQLLAIMC 256
+ F+FLGLLAL V+ CN T L+ R + K SQ Q E IQL+ IMC
Sbjct: 230 FASAFAFLGLLALTVTFSCNLATIKALVSRCRAKATASQSSAQWGRITTETAIQLMGIMC 289
Query: 257 VSCICWSPFLVTMANIGINGNHSLETCET----------TLFALRMATWNQILDPWVYIL 306
V +CWSP L+ M + N S+E C+T L A+R+A+ NQILDPWVY+L
Sbjct: 290 VLSVCWSPLLIMMLKMIFN-QTSVEHCKTHTEKQKECNFFLIAVRLASLNQILDPWVYLL 348
Query: 307 LRKAVLKNLYKL 318
LRK +L+ ++
Sbjct: 349 LRKILLRKFCQI 360
>gi|38505186 prostaglandin E receptor 3, subtype EP3 isoform 8 [Homo
sapiens]
Length = 418
Score = 197 bits (501), Expect = 1e-50
Identities = 114/312 (36%), Positives = 170/312 (54%), Gaps = 22/312 (7%)
Query: 28 LSVFFSVIFMTVGILSNSLAIAILMKAYQRFRQKSKASFLLLASGLVITDFFGHLINGAI 87
+SV F + + G + N+LA+ ++ ++Y+R K K SFLL L +TD G L+ +
Sbjct: 50 VSVAFPITMLLTGFVGNALAMLLVSRSYRRRESKRKKSFLLCIGWLALTDLVGQLLTTPV 109
Query: 88 AVFVYASDKEWIRFDQSNVLCSIFGICMVFSGLCPLLLGSVMAIERCIGVTKPIFHSTKI 147
+ VY S + W D S LC+ FG+ M GL L + S MA+ER + + P ++++ +
Sbjct: 110 VIVVYLSKQRWEHIDPSGRLCTFFGLTMTVFGLSSLFIASAMAVERALAIRAPHWYASHM 169
Query: 148 TSKHVKMMLSGVCLFAVFIALLPILGHRDYKIQASRTWCFYN-------TEDIKDWEDRF 200
++ + +L GV L + ALLP+LG Y +Q TWCF + T +W + F
Sbjct: 170 KTRATRAVLLGVWLAVLAFALLPVLGVGQYTVQWPGTWCFISTGRGGNGTSSSHNWGNLF 229
Query: 201 YLLLFSFLGLLALGVSLLCNAITGITLL-RVKFK---SQQHRQGRSHHLEMVIQLLAIMC 256
+ F+FLGLLAL V+ CN T L+ R + K SQ Q E IQL+ IMC
Sbjct: 230 FASAFAFLGLLALTVTFSCNLATIKALVSRCRAKATASQSSAQWGRITTETAIQLMGIMC 289
Query: 257 VSCICWSPFLVTMANIGINGNHSLETCET----------TLFALRMATWNQILDPWVYIL 306
V +CWSP L+ M + N S+E C+T L A+R+A+ NQILDPWVY+L
Sbjct: 290 VLSVCWSPLLIMMLKMIFN-QTSVEHCKTHTEKQKECNFFLIAVRLASLNQILDPWVYLL 348
Query: 307 LRKAVLKNLYKL 318
LRK +L+ ++
Sbjct: 349 LRKILLRKFCQM 360
>gi|38505182 prostaglandin E receptor 3, subtype EP3 isoform 6 [Homo
sapiens]
Length = 374
Score = 197 bits (501), Expect = 1e-50
Identities = 114/312 (36%), Positives = 170/312 (54%), Gaps = 22/312 (7%)
Query: 28 LSVFFSVIFMTVGILSNSLAIAILMKAYQRFRQKSKASFLLLASGLVITDFFGHLINGAI 87
+SV F + + G + N+LA+ ++ ++Y+R K K SFLL L +TD G L+ +
Sbjct: 50 VSVAFPITMLLTGFVGNALAMLLVSRSYRRRESKRKKSFLLCIGWLALTDLVGQLLTTPV 109
Query: 88 AVFVYASDKEWIRFDQSNVLCSIFGICMVFSGLCPLLLGSVMAIERCIGVTKPIFHSTKI 147
+ VY S + W D S LC+ FG+ M GL L + S MA+ER + + P ++++ +
Sbjct: 110 VIVVYLSKQRWEHIDPSGRLCTFFGLTMTVFGLSSLFIASAMAVERALAIRAPHWYASHM 169
Query: 148 TSKHVKMMLSGVCLFAVFIALLPILGHRDYKIQASRTWCFYN-------TEDIKDWEDRF 200
++ + +L GV L + ALLP+LG Y +Q TWCF + T +W + F
Sbjct: 170 KTRATRAVLLGVWLAVLAFALLPVLGVGQYTVQWPGTWCFISTGRGGNGTSSSHNWGNLF 229
Query: 201 YLLLFSFLGLLALGVSLLCNAITGITLL-RVKFK---SQQHRQGRSHHLEMVIQLLAIMC 256
+ F+FLGLLAL V+ CN T L+ R + K SQ Q E IQL+ IMC
Sbjct: 230 FASAFAFLGLLALTVTFSCNLATIKALVSRCRAKATASQSSAQWGRITTETAIQLMGIMC 289
Query: 257 VSCICWSPFLVTMANIGINGNHSLETCET----------TLFALRMATWNQILDPWVYIL 306
V +CWSP L+ M + N S+E C+T L A+R+A+ NQILDPWVY+L
Sbjct: 290 VLSVCWSPLLIMMLKMIFN-QTSVEHCKTHTEKQKECNFFLIAVRLASLNQILDPWVYLL 348
Query: 307 LRKAVLKNLYKL 318
LRK +L+ ++
Sbjct: 349 LRKILLRKFCQM 360
>gi|38505178 prostaglandin E receptor 3, subtype EP3 isoform 4 [Homo
sapiens]
Length = 390
Score = 197 bits (501), Expect = 1e-50
Identities = 114/312 (36%), Positives = 170/312 (54%), Gaps = 22/312 (7%)
Query: 28 LSVFFSVIFMTVGILSNSLAIAILMKAYQRFRQKSKASFLLLASGLVITDFFGHLINGAI 87
+SV F + + G + N+LA+ ++ ++Y+R K K SFLL L +TD G L+ +
Sbjct: 50 VSVAFPITMLLTGFVGNALAMLLVSRSYRRRESKRKKSFLLCIGWLALTDLVGQLLTTPV 109
Query: 88 AVFVYASDKEWIRFDQSNVLCSIFGICMVFSGLCPLLLGSVMAIERCIGVTKPIFHSTKI 147
+ VY S + W D S LC+ FG+ M GL L + S MA+ER + + P ++++ +
Sbjct: 110 VIVVYLSKQRWEHIDPSGRLCTFFGLTMTVFGLSSLFIASAMAVERALAIRAPHWYASHM 169
Query: 148 TSKHVKMMLSGVCLFAVFIALLPILGHRDYKIQASRTWCFYN-------TEDIKDWEDRF 200
++ + +L GV L + ALLP+LG Y +Q TWCF + T +W + F
Sbjct: 170 KTRATRAVLLGVWLAVLAFALLPVLGVGQYTVQWPGTWCFISTGRGGNGTSSSHNWGNLF 229
Query: 201 YLLLFSFLGLLALGVSLLCNAITGITLL-RVKFK---SQQHRQGRSHHLEMVIQLLAIMC 256
+ F+FLGLLAL V+ CN T L+ R + K SQ Q E IQL+ IMC
Sbjct: 230 FASAFAFLGLLALTVTFSCNLATIKALVSRCRAKATASQSSAQWGRITTETAIQLMGIMC 289
Query: 257 VSCICWSPFLVTMANIGINGNHSLETCET----------TLFALRMATWNQILDPWVYIL 306
V +CWSP L+ M + N S+E C+T L A+R+A+ NQILDPWVY+L
Sbjct: 290 VLSVCWSPLLIMMLKMIFN-QTSVEHCKTHTEKQKECNFFLIAVRLASLNQILDPWVYLL 348
Query: 307 LRKAVLKNLYKL 318
LRK +L+ ++
Sbjct: 349 LRKILLRKFCQI 360
>gi|38505172 prostaglandin E receptor 3, subtype EP3 isoform 1 [Homo
sapiens]
Length = 425
Score = 197 bits (501), Expect = 1e-50
Identities = 114/312 (36%), Positives = 170/312 (54%), Gaps = 22/312 (7%)
Query: 28 LSVFFSVIFMTVGILSNSLAIAILMKAYQRFRQKSKASFLLLASGLVITDFFGHLINGAI 87
+SV F + + G + N+LA+ ++ ++Y+R K K SFLL L +TD G L+ +
Sbjct: 50 VSVAFPITMLLTGFVGNALAMLLVSRSYRRRESKRKKSFLLCIGWLALTDLVGQLLTTPV 109
Query: 88 AVFVYASDKEWIRFDQSNVLCSIFGICMVFSGLCPLLLGSVMAIERCIGVTKPIFHSTKI 147
+ VY S + W D S LC+ FG+ M GL L + S MA+ER + + P ++++ +
Sbjct: 110 VIVVYLSKQRWEHIDPSGRLCTFFGLTMTVFGLSSLFIASAMAVERALAIRAPHWYASHM 169
Query: 148 TSKHVKMMLSGVCLFAVFIALLPILGHRDYKIQASRTWCFYN-------TEDIKDWEDRF 200
++ + +L GV L + ALLP+LG Y +Q TWCF + T +W + F
Sbjct: 170 KTRATRAVLLGVWLAVLAFALLPVLGVGQYTVQWPGTWCFISTGRGGNGTSSSHNWGNLF 229
Query: 201 YLLLFSFLGLLALGVSLLCNAITGITLL-RVKFK---SQQHRQGRSHHLEMVIQLLAIMC 256
+ F+FLGLLAL V+ CN T L+ R + K SQ Q E IQL+ IMC
Sbjct: 230 FASAFAFLGLLALTVTFSCNLATIKALVSRCRAKATASQSSAQWGRITTETAIQLMGIMC 289
Query: 257 VSCICWSPFLVTMANIGINGNHSLETCET----------TLFALRMATWNQILDPWVYIL 306
V +CWSP L+ M + N S+E C+T L A+R+A+ NQILDPWVY+L
Sbjct: 290 VLSVCWSPLLIMMLKMIFN-QTSVEHCKTHTEKQKECNFFLIAVRLASLNQILDPWVYLL 348
Query: 307 LRKAVLKNLYKL 318
LRK +L+ ++
Sbjct: 349 LRKILLRKFCQM 360
>gi|186659506 prostaglandin E receptor 3, subtype EP3 isoform 4
[Homo sapiens]
Length = 390
Score = 197 bits (501), Expect = 1e-50
Identities = 114/312 (36%), Positives = 170/312 (54%), Gaps = 22/312 (7%)
Query: 28 LSVFFSVIFMTVGILSNSLAIAILMKAYQRFRQKSKASFLLLASGLVITDFFGHLINGAI 87
+SV F + + G + N+LA+ ++ ++Y+R K K SFLL L +TD G L+ +
Sbjct: 50 VSVAFPITMLLTGFVGNALAMLLVSRSYRRRESKRKKSFLLCIGWLALTDLVGQLLTTPV 109
Query: 88 AVFVYASDKEWIRFDQSNVLCSIFGICMVFSGLCPLLLGSVMAIERCIGVTKPIFHSTKI 147
+ VY S + W D S LC+ FG+ M GL L + S MA+ER + + P ++++ +
Sbjct: 110 VIVVYLSKQRWEHIDPSGRLCTFFGLTMTVFGLSSLFIASAMAVERALAIRAPHWYASHM 169
Query: 148 TSKHVKMMLSGVCLFAVFIALLPILGHRDYKIQASRTWCFYN-------TEDIKDWEDRF 200
++ + +L GV L + ALLP+LG Y +Q TWCF + T +W + F
Sbjct: 170 KTRATRAVLLGVWLAVLAFALLPVLGVGQYTVQWPGTWCFISTGRGGNGTSSSHNWGNLF 229
Query: 201 YLLLFSFLGLLALGVSLLCNAITGITLL-RVKFK---SQQHRQGRSHHLEMVIQLLAIMC 256
+ F+FLGLLAL V+ CN T L+ R + K SQ Q E IQL+ IMC
Sbjct: 230 FASAFAFLGLLALTVTFSCNLATIKALVSRCRAKATASQSSAQWGRITTETAIQLMGIMC 289
Query: 257 VSCICWSPFLVTMANIGINGNHSLETCET----------TLFALRMATWNQILDPWVYIL 306
V +CWSP L+ M + N S+E C+T L A+R+A+ NQILDPWVY+L
Sbjct: 290 VLSVCWSPLLIMMLKMIFN-QTSVEHCKTHTEKQKECNFFLIAVRLASLNQILDPWVYLL 348
Query: 307 LRKAVLKNLYKL 318
LRK +L+ ++
Sbjct: 349 LRKILLRKFCQI 360
>gi|38505184 prostaglandin E receptor 3, subtype EP3 isoform 7 [Homo
sapiens]
Length = 365
Score = 197 bits (500), Expect = 2e-50
Identities = 114/307 (37%), Positives = 168/307 (54%), Gaps = 22/307 (7%)
Query: 28 LSVFFSVIFMTVGILSNSLAIAILMKAYQRFRQKSKASFLLLASGLVITDFFGHLINGAI 87
+SV F + + G + N+LA+ ++ ++Y+R K K SFLL L +TD G L+ +
Sbjct: 50 VSVAFPITMLLTGFVGNALAMLLVSRSYRRRESKRKKSFLLCIGWLALTDLVGQLLTTPV 109
Query: 88 AVFVYASDKEWIRFDQSNVLCSIFGICMVFSGLCPLLLGSVMAIERCIGVTKPIFHSTKI 147
+ VY S + W D S LC+ FG+ M GL L + S MA+ER + + P ++++ +
Sbjct: 110 VIVVYLSKQRWEHIDPSGRLCTFFGLTMTVFGLSSLFIASAMAVERALAIRAPHWYASHM 169
Query: 148 TSKHVKMMLSGVCLFAVFIALLPILGHRDYKIQASRTWCFYN-------TEDIKDWEDRF 200
++ + +L GV L + ALLP+LG Y +Q TWCF + T +W + F
Sbjct: 170 KTRATRAVLLGVWLAVLAFALLPVLGVGQYTVQWPGTWCFISTGRGGNGTSSSHNWGNLF 229
Query: 201 YLLLFSFLGLLALGVSLLCNAITGITLL-RVKFK---SQQHRQGRSHHLEMVIQLLAIMC 256
+ F+FLGLLAL V+ CN T L+ R + K SQ Q E IQL+ IMC
Sbjct: 230 FASAFAFLGLLALTVTFSCNLATIKALVSRCRAKATASQSSAQWGRITTETAIQLMGIMC 289
Query: 257 VSCICWSPFLVTMANIGINGNHSLETCET----------TLFALRMATWNQILDPWVYIL 306
V +CWSP L+ M + N S+E C+T L A+R+A+ NQILDPWVY+L
Sbjct: 290 VLSVCWSPLLIMMLKMIFN-QTSVEHCKTHTEKQKECNFFLIAVRLASLNQILDPWVYLL 348
Query: 307 LRKAVLK 313
LRK +L+
Sbjct: 349 LRKILLR 355
>gi|38505176 prostaglandin E receptor 3, subtype EP3 isoform 3 [Homo
sapiens]
Length = 393
Score = 197 bits (500), Expect = 2e-50
Identities = 114/307 (37%), Positives = 168/307 (54%), Gaps = 22/307 (7%)
Query: 28 LSVFFSVIFMTVGILSNSLAIAILMKAYQRFRQKSKASFLLLASGLVITDFFGHLINGAI 87
+SV F + + G + N+LA+ ++ ++Y+R K K SFLL L +TD G L+ +
Sbjct: 50 VSVAFPITMLLTGFVGNALAMLLVSRSYRRRESKRKKSFLLCIGWLALTDLVGQLLTTPV 109
Query: 88 AVFVYASDKEWIRFDQSNVLCSIFGICMVFSGLCPLLLGSVMAIERCIGVTKPIFHSTKI 147
+ VY S + W D S LC+ FG+ M GL L + S MA+ER + + P ++++ +
Sbjct: 110 VIVVYLSKQRWEHIDPSGRLCTFFGLTMTVFGLSSLFIASAMAVERALAIRAPHWYASHM 169
Query: 148 TSKHVKMMLSGVCLFAVFIALLPILGHRDYKIQASRTWCFYN-------TEDIKDWEDRF 200
++ + +L GV L + ALLP+LG Y +Q TWCF + T +W + F
Sbjct: 170 KTRATRAVLLGVWLAVLAFALLPVLGVGQYTVQWPGTWCFISTGRGGNGTSSSHNWGNLF 229
Query: 201 YLLLFSFLGLLALGVSLLCNAITGITLL-RVKFK---SQQHRQGRSHHLEMVIQLLAIMC 256
+ F+FLGLLAL V+ CN T L+ R + K SQ Q E IQL+ IMC
Sbjct: 230 FASAFAFLGLLALTVTFSCNLATIKALVSRCRAKATASQSSAQWGRITTETAIQLMGIMC 289
Query: 257 VSCICWSPFLVTMANIGINGNHSLETCET----------TLFALRMATWNQILDPWVYIL 306
V +CWSP L+ M + N S+E C+T L A+R+A+ NQILDPWVY+L
Sbjct: 290 VLSVCWSPLLIMMLKMIFN-QTSVEHCKTHTEKQKECNFFLIAVRLASLNQILDPWVYLL 348
Query: 307 LRKAVLK 313
LRK +L+
Sbjct: 349 LRKILLR 355
>gi|4507381 thromboxane A2 receptor [Homo sapiens]
Length = 343
Score = 189 bits (480), Expect = 3e-48
Identities = 120/302 (39%), Positives = 166/302 (54%), Gaps = 14/302 (4%)
Query: 25 ENRL--SVFFSVIFMTVGILSNSLAIAILMKAYQRFRQKSKASFLLLASGLVITDFFGHL 82
E RL S +F+ F VG+ SN LA+++L A Q +++SFL GLV+TDF G L
Sbjct: 21 ERRLIASPWFAASFCVVGLASNLLALSVLAGARQG-GSHTRSSFLTFLCGLVLTDFLGLL 79
Query: 83 INGAIAVFVYASDKEWIRFDQSNVLCSIFGICMVFSGLCPLLLGSVMAIERCIGVTKPIF 142
+ G I V +A+ EW D LC G+ M+F GL PLLLG+ MA ER +G+T+P
Sbjct: 80 VTGTIVVSQHAALFEWHAVDPGCRLCRFMGVVMIFFGLSPLLLGAAMASERYLGITRPFS 139
Query: 143 HSTKITSKHVKMMLSGVCLFAVFIALLPILGHRDYKIQASRTWCFYNTEDIKDWEDRFYL 202
+ + + V A+ + LLP+LG Y +Q +WCF + D +
Sbjct: 140 RPAVASQRRAWATVGLVWAAALALGLLPLLGVGRYTVQYPGSWCFLTLG--AESGDVAFG 197
Query: 203 LLFSFLGLLALGVSLLCNAITGITLLRVKFKSQQHRQ-GRSHHLEMVIQLLAIMCVSCIC 261
LLFS LG L++G+S L N ++ TL V + +Q R +EM+ QLL IM V+ +C
Sbjct: 198 LLFSMLGGLSVGLSFLLNTVSVATLCHVYHGQEAAQQRPRDSEVEMMAQLLGIMVVASVC 257
Query: 262 WSPFLVTMANIGIN--------GNHSLETCETTLFALRMATWNQILDPWVYILLRKAVLK 313
W P LV +A + G S T + L LR+ATWNQILDPWVYIL R+AVL+
Sbjct: 258 WLPLLVFIAQTVLRNPPAMSPAGQLSRTTEKELLIYLRVATWNQILDPWVYILFRRAVLR 317
Query: 314 NL 315
L
Sbjct: 318 RL 319
>gi|4506263 prostaglandin I2 (prostacyclin) receptor (IP) [Homo
sapiens]
Length = 386
Score = 110 bits (275), Expect = 2e-24
Identities = 80/294 (27%), Positives = 130/294 (44%), Gaps = 21/294 (7%)
Query: 33 SVIFMTVGILSNSLAIAILMKAYQRFRQKSKASFLLLASGLVITDFFGHLINGAIAVFVY 92
S + G++ N LA+ IL R ++F +L +GL TD G Y
Sbjct: 20 STLMFVAGVVGNGLALGILSAR----RPARPSAFAVLVTGLAATDLLGTSFLSPAVFVAY 75
Query: 93 ASDKEWIRFDQSN-VLCSIFGICMVFSGLCPLLLGSVMAIERCIGVTKPIFHSTKITSKH 151
A + + + LC F M F GL +L+ MA+ERC+ ++ P ++ +
Sbjct: 76 ARNSSLLGLARGGPALCDAFAFAMTFFGLASMLILFAMAVERCLALSHPYLYAQLDGPRC 135
Query: 152 VKMMLSGVCLFAVFIALLPILGHRDYKIQASRTWCFYNTEDIKDWEDRFYLLLFSFLGLL 211
++ L + F V LP+LG ++ +WCF + F L ++ GL+
Sbjct: 136 ARLALPAIYAFCVLFCALPLLGLGQHQQYCPGSWCFLRMRWAQPGGAAFSL---AYAGLV 192
Query: 212 ALGVS--LLCNAITGITLLRVKFKSQQHRQGR--------SHHLEMVIQLLAIMCVSCIC 261
AL V+ LCN ++L R+ ++ Q+ QG ++ +I L + V +C
Sbjct: 193 ALLVAAIFLCNGSVTLSLCRM-YRQQKRHQGSLGPRPRTGEDEVDHLILLALMTVVMAVC 251
Query: 262 WSPFLVTMANIGINGNHSLETCETTLFALRMATWNQILDPWVYILLRKAVLKNL 315
P + + + S E + L A R +N ILDPWV+IL RKAV + L
Sbjct: 252 SLPLTIRCFTQAVAPDSSSEMGD--LLAFRFYAFNPILDPWVFILFRKAVFQRL 303
>gi|31881630 prostaglandin E receptor 2 (subtype EP2), 53kDa [Homo
sapiens]
Length = 358
Score = 100 bits (248), Expect = 3e-21
Identities = 84/334 (25%), Positives = 145/334 (43%), Gaps = 42/334 (12%)
Query: 22 CQTENRL----SVFFSVIFMTVGILSNSLAIAILMKAYQ------RFRQKSKASFLLLAS 71
C+T L S S + + G+L N +A+A+L + ++ R+ S + F +L +
Sbjct: 13 CETRQWLPPGESPAISSVMFSAGVLGNLIALALLARRWRGDVGCSAGRRSSLSLFHVLVT 72
Query: 72 GLVITDFFGHLINGAIAVFVYASDKEWIRFDQSNVLCSIFGICMVFSGLCPLLLGSVMAI 131
LV TD G + + + YA ++ + + C+ F M F L +L+ MA+
Sbjct: 73 ELVFTDLLGTCLISPVVLASYARNQTLVALAPESRACTYFAFAMTFFSLATMLMLFAMAL 132
Query: 132 ERCIGVTKPIFHSTKITSKHVKMMLSGVCLFAVFIALLPILGHRDYKIQASRTWCFYNTE 191
ER + + P F+ +++ +L + ++ LP+L + Y TWCF
Sbjct: 133 ERYLSIGHPYFYQRRVSRSGGLAVLPVIYAVSLLFCSLPLLDYGQYVQYCPGTWCFIRHG 192
Query: 192 DIKDWEDRFYLLLFSFLGLLALGVSLLCNAITGITLLRVKFKSQQHRQG----------- 240
YL L++ L LL + L CN + L+R+ +S++ R G
Sbjct: 193 RTA------YLQLYATLLLLLIVSVLACNFSVILNLIRMHRRSRRSRCGPSLGSGRGGPG 246
Query: 241 ---RSHHLEMV-----IQLLAIMCVS-CICWSPFLVTMANIGINGNHSLETCETTLFALR 291
R + M + LLAIM ++ +C PF + S + L ALR
Sbjct: 247 ARRRGERVSMAEETDHLILLAIMTITFAVCSLPFTI----FAYMNETSSRKEKWDLQALR 302
Query: 292 MATWNQILDPWVYILLRKAVLKNLYKLASQCCGV 325
+ N I+DPWV+ +LR VL+ + + CC +
Sbjct: 303 FLSINSIIDPWVFAILRPPVLRLMRSVL--CCRI 334
>gi|4506259 prostaglandin E receptor 4, subtype EP4 [Homo sapiens]
Length = 488
Score = 90.1 bits (222), Expect = 3e-18
Identities = 89/350 (25%), Positives = 144/350 (41%), Gaps = 73/350 (20%)
Query: 30 VFFSVIFMTVGILSNSLAIAILMKAYQRFRQKSKASFLLLASGLVITDFFGHLINGAIAV 89
V + G++ N +AI +L K+ +++ + +F L GL +TD G L+ + +
Sbjct: 21 VTIPAVMFIFGVVGNLVAIVVLCKSR---KEQKETTFYTLVCGLAVTDLLGTLLVSPVTI 77
Query: 90 FVYASDKEWIRFDQSNVLCSIFGICMVFSGLCPLLLGSVMAIERCIGVTKPIFHSTKITS 149
Y + + LC ++F L L + M++ER + + F+S
Sbjct: 78 ATYMKGQ----WPGGQPLCEYSTFILLFFSLSGLSIICAMSVERYLAINHAYFYS----- 128
Query: 150 KHVKMMLSGVCLFAVFIA-----LLPILGHRDYKIQASRTWCFYNTEDIKDWEDRF---- 200
+V L+G+ LFAV+ + LP +G ++Q TWCF DW
Sbjct: 129 HYVDKRLAGLTLFAVYASNVLFCALPNMGLGSSRLQYPDTWCFI------DWTTNVTAHA 182
Query: 201 -YLLLFSFLGLLALGVSLLCNAITGITLLRV--------KFKSQQHR-------QGRSH- 243
Y +++ + ++LCN + LLR+ ++QH R H
Sbjct: 183 AYSYMYAGFSSFLILATVLCNVLVCGALLRMHRQFMRRTSLGTEQHHAAAAASVASRGHP 242
Query: 244 ------------------------HLEMVIQLLAIMCVSCICWSPFLVTMANIGINGNHS 279
++MVI L+A V IC P LV + S
Sbjct: 243 AASPALPRLSDFRRRRSFRRIAGAEIQMVILLIATSLVVLICSIP-LVVRVFVNQLYQPS 301
Query: 280 LE---TCETTLFALRMATWNQILDPWVYILLRKAVL-KNLYKLASQCCGV 325
LE + L A+R+A+ N ILDPW+YILLRK VL K + K+ C +
Sbjct: 302 LEREVSKNPDLQAIRIASVNPILDPWIYILLRKTVLSKAIEKIKCLFCRI 351
>gi|28466969 prostaglandin D2 receptor [Homo sapiens]
Length = 359
Score = 82.8 bits (203), Expect = 4e-16
Identities = 84/325 (25%), Positives = 136/325 (41%), Gaps = 32/325 (9%)
Query: 19 NTTCQTENRLSVFFSVIFMTVGILSNSLAIAILMKA-----YQRFRQKSKASFLLLASGL 73
NTT + +V V+F T G+L N LA+ +L ++ +R + + F +L GL
Sbjct: 10 NTTSVEKGNSAVMGGVLFST-GLLGNLLALGLLARSGLGWCSRRPLRPLPSVFYMLVCGL 68
Query: 74 VITDFFGHLINGAIAVFVYASDKEW--IRFDQSNVLCSIFGICMVFSGLCPLLLGSVMAI 131
+TD G + + + YA ++ + N LC F M F GL L MA+
Sbjct: 69 TVTDLLGKCLLSPVVLAAYAQNRSLRVLAPALDNSLCQAFAFFMSFFGLSSTLQLLAMAL 128
Query: 132 ERCIGVTKPIFHSTKITSKHVKMMLSGVCLFAVFIALLPILGHRDYKIQASRTWCFYN-T 190
E + + P F+ IT + ++ V F++ LP +G + TWCF
Sbjct: 129 ECWLSLGHPFFYRRHITLRLGALVAPVVSAFSLAFCALPFMGFGKFVQYCPGTWCFIQMV 188
Query: 191 EDIKDWEDRFYLLLFSFLGLLALGVSLLCNAITGITLLRVKFKSQQH------------- 237
+ Y +L+S L L + ++LCN L + + Q+H
Sbjct: 189 HEEGSLSVLGYSVLYSSLMALLVLATVLCNLGAMRNLYAMHRRLQRHPRSCTRDCAEPRA 248
Query: 238 --RQGRSHHLEMV--IQLLAIMCVSCICWSPFLVTMANIGI-----NGNHSLETCETTLF 288
R+ LE + + LLA+M V S ++ A G N + E E L
Sbjct: 249 DGREASPQPLEELDHLLLLALMTVLFTMCSLPVIYRAYYGAFKDVKEKNRTSEEAE-DLR 307
Query: 289 ALRMATWNQILDPWVYILLRKAVLK 313
ALR + I+DPW++I+ R V +
Sbjct: 308 ALRFLSVISIVDPWIFIIFRSPVFR 332
>gi|5729798 cysteinyl leukotriene receptor 1 [Homo sapiens]
Length = 337
Score = 57.0 bits (136), Expect = 3e-08
Identities = 58/289 (20%), Positives = 123/289 (42%), Gaps = 33/289 (11%)
Query: 29 SVFFSVIFMTVGILSNSLAIAILMKAYQRFRQKSKASFLLLASGLVITDFFGHLINGAIA 88
S +S+I + VG N + +L+K Y + K++F + L + D + +
Sbjct: 27 STLYSMISV-VGFFGNGFVLYVLIKTYHK-----KSAFQVYMINLAVADLLC-VCTLPLR 79
Query: 89 VFVYASDKEWIRFDQSNVLCSIFGICMVFSGLCPLLLGSVMAIERCIGVTKPIFHSTKIT 148
V Y W+ D LC + + + C + + M+ RCI + P+ + +T
Sbjct: 80 VVYYVHKGIWLFGD---FLCRLSTYALYVNLYCSIFFMTAMSFFRCIAIVFPVQNINLVT 136
Query: 149 SKHVKMMLSGVCLFAVFIALLPILGHRDYKIQASRTWCFYNTEDIKDWEDRFYLLLFSFL 208
K + + G+ +F V + P L + K + + T CF E +D + + ++L+ ++
Sbjct: 137 QKKARFVCVGIWIF-VILTSSPFLMAKPQKDEKNNTKCF---EPPQDNQTKNHVLVLHYV 192
Query: 209 GL-----LALGVSLLCNAITGITLLRVKFKSQQHRQGRSHHLEMVIQLLAIMCVSCICWS 263
L + + ++C + +TLL+ K + S H + + ++ + + +
Sbjct: 193 SLFVGFIIPFVIIIVCYTMIILTLLKKSMK-----KNLSSHKKAIGMIMVVTAAFLVSFM 247
Query: 264 PFLVTMANIGINGNHS-LETCETTL-------FALRMATWNQILDPWVY 304
P+ + I ++ H+ + C++ L L +A N DP +Y
Sbjct: 248 PYHI-QRTIHLHFLHNETKPCDSVLRMQKSVVITLSLAASNCCFDPLLY 295
>gi|34577052 coagulation factor II (thrombin) receptor-like 1
precursor [Homo sapiens]
Length = 397
Score = 56.6 bits (135), Expect = 3e-08
Identities = 68/338 (20%), Positives = 143/338 (42%), Gaps = 27/338 (7%)
Query: 28 LSVFFSVIFMTVGILSNSLAIAILMKAYQRFRQKSKASFLLLASGLVITDFFGHLINGAI 87
L + ++++F+ VG+ SN +A+ + + FR K K ++ + L + D +I +
Sbjct: 78 LPIVYTIVFV-VGLPSNGMALWVFL-----FRTKKKHPAVIYMANLALADLLS-VIWFPL 130
Query: 88 AVFVYASDKEWIRFDQSNVLCSIFGICMVFSGLCPLLLGSVMAIERCIGVTKPIFHSTKI 147
+ + WI LC++ + C +L + ++++R + P+ HS K
Sbjct: 131 KIAYHIHGNNWI---YGEALCNVLIGFFYGNMYCSILFMTCLSVQRYWVIVNPMGHSRK- 186
Query: 148 TSKHVKMMLSGVCLFAVFIALLPILGHRDYKIQASRTWCFYNTEDIKDWEDRFYLL--LF 205
++ + +S + + +P+ Y ++ + N D L+ +F
Sbjct: 187 -KANIAIGISLAIWLLILLVTIPL-----YVVKQTIFIPALNITTCHDVLPEQLLVGDMF 240
Query: 206 SFLGLLALGVSLLCNAITG------ITLLRVKFKSQQHRQGRSHHLEMVIQLLAIMCVSC 259
++ LA+GV L +T I +LR + + R +++++ +LA+ + C
Sbjct: 241 NYFLSLAIGVFLFPAFLTASAYVLMIRMLRSSAMDENSEKKRKRAIKLIVTVLAMYLI-C 299
Query: 260 ICWSPFLVTMANIGINGNHSLETCETTLFALRMATWNQILDPWVYILLRKAVLKNLYKLA 319
S L+ + I + AL ++T N +DP+VY + ++ K A
Sbjct: 300 FTPSNLLLVVHYFLIKSQGQSHVYALYIVALCLSTLNSCIDPFVYYFVSHD-FRDHAKNA 358
Query: 320 SQCCGVHVISLHIWELSSIKNSLKVAAISESPVAEKSA 357
C V + L+S K+S K ++ S S K++
Sbjct: 359 LLCRSVRTVKQMQVSLTSKKHSRKSSSYSSSSTTVKTS 396
>gi|4826706 EBV-induced G protein-coupled receptor 2 [Homo sapiens]
Length = 361
Score = 56.2 bits (134), Expect = 4e-08
Identities = 71/321 (22%), Positives = 143/321 (44%), Gaps = 40/321 (12%)
Query: 28 LSVFFSVIFMTVGILSNSLAIAILMKAYQRFRQKSKASFLLLASGLVITDFFGHLINGAI 87
+ + +S++F+ +G++ N LA+ ++++ +K S L ++ LVI+D L A+
Sbjct: 34 MPLHYSLVFI-IGLVGNLLALVVIVQ-----NRKKINSTTLYSTNLVISDI---LFTTAL 84
Query: 88 AVFV--YASDKEWIRFDQSNVLCSIFGICMVFSGLCPLLLGSVMAIERCIGVTKPIFHST 145
+ YA +W D LC I + + + + ++I+R I V P+ ++
Sbjct: 85 PTRIAYYAMGFDWRIGD---ALCRITALVFYINTYAGVNFMTCLSIDRFIAVVHPLRYNK 141
Query: 146 KITSKHVKMMLSGVCLFA---VFIALLPILGHRDYKIQASRTWC--FYNTEDIKDWEDRF 200
+H K GVC+F VF LP+L + K +A R C + N E+ K +
Sbjct: 142 IKRIEHAK----GVCIFVWILVFAQTLPLLINPMSKQEAERITCMEYPNFEETKSLP--W 195
Query: 201 YLLLFSFLG-LLALGVSLLCNAITGITLLRVKFKSQQHRQGRSHHLEMVIQLLAIMCVSC 259
LL F+G +L L + L+C + L R K + + + + ++ I+ V
Sbjct: 196 ILLGACFIGYVLPLIIILICYSQICCKLFRTA-KQNPLTEKSGVNKKALNTIILIIVVFV 254
Query: 260 ICWSPFLVTMAN-----------IGINGNHSLETCETTLFALRMATWNQILDPWVYILLR 308
+C++P+ V + + + HS + + F + + +N +DP++Y
Sbjct: 255 LCFTPYHVAIIQHMIKKLRFSNFLECSQRHSFQI--SLHFTVCLMNFNCCMDPFIYFFAC 312
Query: 309 KAVLKNLYKLASQCCGVHVIS 329
K + + ++ + V + S
Sbjct: 313 KGYKRKVMRMLKRQVSVSISS 333
>gi|71999131 opsin 3 [Homo sapiens]
Length = 402
Score = 53.9 bits (128), Expect = 2e-07
Identities = 67/294 (22%), Positives = 127/294 (43%), Gaps = 23/294 (7%)
Query: 33 SVIFMTVGILS--NSLAIAILMKAYQRFRQKSKASFLLLASGLVITDFFGHLINGAIAVF 90
+++ ++G+L N+L + +L +QR R + LL + ++D L G F
Sbjct: 45 ALLLGSIGLLGVGNNLLVLVLYYKFQRLRTPTH----LLLVNISLSDLLVSLF-GVTFTF 99
Query: 91 VYASDKEWIRFDQSNVLCSIFGICMVFSGLCPLLLGSVMAIERCIGVTKPIFHSTKITSK 150
V W+ V C G G+ + +V+A ER I V H+ I
Sbjct: 100 VSCLRNGWV---WDTVGCVWDGFSGSLFGIVSIATLTVLAYERYIRVV----HARVINFS 152
Query: 151 HVKMMLSGVCLFAVFIALLPILGHRDYKIQASRTWCFYNTEDIKDWEDRFYLLLFSFLGL 210
++ + L+++ A P+LG Y + C + + KD D ++L F FLG
Sbjct: 153 WAWRAITYIWLYSLAWAGAPLLGWNRYILDVHGLGCTVDWKS-KDANDSSFVL-FLFLGC 210
Query: 211 LA--LGVSLLC--NAITGITLLRVKFKSQQHRQGRSHHLEMVIQLLAIMCVSC--ICWSP 264
L LGV C + + I +LR Q + + E + + + + +CW P
Sbjct: 211 LVVPLGVIAHCYGHILYSIRMLRCVEDLQTIQVIKILKYEKKLAKMCFLMIFTFLVCWMP 270
Query: 265 FLVTMANIGINGNHSLETCETTLFALRMATWNQILDPWVYILLRKAVLKNLYKL 318
++V + + +NG+ L T ++ + A N + +P +Y+ + + ++L +L
Sbjct: 271 YIV-ICFLVVNGHGHLVTPTISIVSYLFAKSNTVYNPVIYVFMIRKFRRSLLQL 323
>gi|4758326 coagulation factor II (thrombin) receptor-like 2
precursor [Homo sapiens]
Length = 374
Score = 52.4 bits (124), Expect = 6e-07
Identities = 71/305 (23%), Positives = 126/305 (41%), Gaps = 34/305 (11%)
Query: 15 ALLSNTTCQTENRLSVFFSVIFMTVGILSNSLAIAILMKAYQRFRQKSKASFLLLASGLV 74
A + T +L ++ VG+ +N++ + +L FR +S + + + L
Sbjct: 83 ATMGYLTSSLSTKLIPAIYLLVFVVGVPANAVTLWMLF-----FRTRSICTTVFYTN-LA 136
Query: 75 ITDFFGHLINGAIAVFVYASDKEWIRFDQSNVLCSIFGICMVFSGLCPLLLGSVMAIERC 134
I DF + + + + W+ VLC + + C +LL + ++I R
Sbjct: 137 IADFL-FCVTLPFKIAYHLNGNNWVF---GEVLCRATTVIFYGNMYCSILLLACISINRY 192
Query: 135 IGVTKPIFHSTKITSKHVKMMLS-GVCLFAVFIALLP--ILGHRDYKIQASRTWCF--YN 189
+ + P + + KH +++ G+ VF+ +LP IL Y +Q T C +N
Sbjct: 193 LAIVHPFTY--RGLPKHTYALVTCGLVWATVFLYMLPFFILKQEYYLVQPDITTCHDVHN 250
Query: 190 TEDIKDWEDRFYLLLFSFLGLLALGVSLL-CNAITGITLLRVKFKSQQHRQGRSHHLEMV 248
T + +Y + +F G L V ++ C A TL + HR L V
Sbjct: 251 TCESSSPFQLYYFISLAFFGFLIPFVLIIYCYAAIIRTL-----NAYDHRW-----LWYV 300
Query: 249 IQLLAIMCVSCICWSP----FLVTMANIGINGNHSLETCETTLFALRMATWNQILDPWVY 304
L I+ + IC++P ++ AN N L L AL + + N LDP++Y
Sbjct: 301 KASLLILVIFTICFAPSNIILIIHHANYYYNNTDGLYFIY--LIALCLGSLNSCLDPFLY 358
Query: 305 ILLRK 309
L+ K
Sbjct: 359 FLMSK 363
>gi|4506241 platelet-activating factor receptor [Homo sapiens]
Length = 342
Score = 50.4 bits (119), Expect = 2e-06
Identities = 72/308 (23%), Positives = 123/308 (39%), Gaps = 45/308 (14%)
Query: 30 VFFSVIFMTVGILSNSLAIAILMKAYQRFRQKSKASFLLLASGLVITDFFGHLINGAIAV 89
+ +S+IF+ +G+++N + + + Y + F++ L + D LI + +
Sbjct: 20 IVYSIIFV-LGVIANGYVLWVFARLYPCKKFNEIKIFMV---NLTMADML-FLITLPLWI 74
Query: 90 FVYASDKEWIRFDQSNVLCSIFGICMVFSGLCPLLLGSVMAIERCIGVTKPIFHSTKITS 149
Y + WI LC++ G + C + V+ R VT+PI + T
Sbjct: 75 VYYQNQGNWIL---PKFLCNVAGCLFFINTYCSVAFLGVITYNRFQAVTRPIKTAQANTR 131
Query: 150 KHVKMMLSGVCLFAV------FIALLPILGHRDYKIQASRTWCF--YNTEDIKDWEDRFY 201
K + LS V A+ F+ L D + T CF Y + +
Sbjct: 132 KR-GISLSLVIWVAIVGAASYFLILDSTNTVPDSAGSGNVTRCFEHYEKGSVPVLIIHIF 190
Query: 202 LLLFSFLGLLALGVSLLCNAITGITLLRVKFKSQQHRQGRSHHLEMVIQLLAIMCVSCIC 261
++ FL L + L CN + TLL + Q++ + + L MV +LA+ IC
Sbjct: 191 IVFSFFLVFLII---LFCNLVIIRTLLMQPVQQQRNAEVKRRALWMVCTVLAVF---IIC 244
Query: 262 WSPFLV-----TMANIG---------INGNHSLETCETTLFALRMATWNQILDPWVYILL 307
+ P V T+A +G IN H + C + + N +LDP +Y L
Sbjct: 245 FVPHHVVQLPWTLAELGFQDSKFHQAINDAHQVTLC--------LLSTNCVLDPVIYCFL 296
Query: 308 RKAVLKNL 315
K K+L
Sbjct: 297 TKKFRKHL 304
>gi|5730019 peropsin [Homo sapiens]
Length = 337
Score = 50.1 bits (118), Expect = 3e-06
Identities = 46/247 (18%), Positives = 108/247 (43%), Gaps = 12/247 (4%)
Query: 23 QTENRLSVFFSVIFMTVGILSNSLAIAILMKAYQRFRQKSKASFLLLASGLVITDFFGHL 82
QTE+ + + ++ + I+SN + + I +K Y+ R + A + LA + G+
Sbjct: 22 QTEHNIVATYLIMAGMISIISNIIVLGIFIK-YKELRTPTNAIIINLAVTDIGVSSIGYP 80
Query: 83 INGAIAVFVYASDKEWIRFDQSNVLCSIFGICMVFSGLCPLLLGSVMAIERCIGVTKPIF 142
++ A ++ W +F + C ++ +F G+ + L +V+A++R + + P
Sbjct: 81 MSAASDLY-----GSW-KFGYAG--CQVYAGLNIFFGMASIGLLTVVAVDRYLTICLPDV 132
Query: 143 HSTKITSKHVKMMLSGVCLFAVFIALLPILGHRDYKIQASRTWCFYNTEDIKDWEDRFYL 202
T+ ++ ++L G + +F AL+PI+G Y + C N + +
Sbjct: 133 GRRMTTNTYIGLIL-GAWINGLFWALMPIIGWASYAPDPTGATCTINWRKNDRSFVSYTM 191
Query: 203 LLFSFLGLLALGVSLLC--NAITGITLLRVKFKSQQHRQGRSHHLEMVIQLLAIMCVSCI 260
+ + ++ L V C + I ++ + S +++ + ++C+ +
Sbjct: 192 TVIAINFIVPLTVMFYCYYHVTLSIKHHTTSDCTESLNRDWSDQIDVTKMSVIMICMFLV 251
Query: 261 CWSPFLV 267
WSP+ +
Sbjct: 252 AWSPYSI 258
>gi|4885311 lysophosphatidic acid receptor 4 [Homo sapiens]
Length = 370
Score = 49.7 bits (117), Expect = 4e-06
Identities = 58/311 (18%), Positives = 131/311 (42%), Gaps = 26/311 (8%)
Query: 18 SNTTCQTE-----NRLSVFFSVIFMTVGILSNSLAIAILMKAYQRFRQKSKASFLLLASG 72
+N TC + N +SV+F+ +G+++NS+++ + FR K ++ + +
Sbjct: 27 ANNTCIVDDSFKYNLNGAVYSVVFI-LGLITNSVSLFVFC-----FRMKMRSETAIFITN 80
Query: 73 LVITDFFGHLINGAIAVFVYASDKEWIRFDQSNVLCSIFGICMVFSGLCPLLLGSVMAIE 132
L ++D + +F Y ++ W D LC I G + + +L + ++++
Sbjct: 81 LAVSDLL-FVCTLPFKIF-YNFNRHWPFGD---TLCKISGTAFLTNIYGSMLFLTCISVD 135
Query: 133 RCIGVTKPIFHSTKITSKHVKMMLSGVCLFAVFIALLPILGHRDYKIQASRTWCFYNTED 192
R + + P T T ++ ++ +GV + + + L + + T CF
Sbjct: 136 RFLAIVYPFRSRTIRTRRNSAIVCAGVWILVLSGGISASL-FSTTNVNNATTTCFEGFSK 194
Query: 193 IKDWEDRFYLLLFSFLGLLALGVSLLCNAITGITLLRVKFKSQQHRQGRSHHLEMVIQLL 252
+ W+ + + F+ ++ + L+ N +LR K Q ++ +++ +
Sbjct: 195 -RVWKT-YLSKITIFIEVVGFIIPLILNVSCSSVVLRTLRKPATLSQIGTNKKKVLKMIT 252
Query: 253 AIMCVSCICWSPFLVTMANIGINGNHSLETCETTLFA-------LRMATWNQILDPWVYI 305
M V +C+ P+ + + + ++ C FA L +AT N DP++Y
Sbjct: 253 VHMAVFVVCFVPYNSVLFLYALVRSQAITNCFLERFAKIMYPITLCLATLNCCFDPFIYY 312
Query: 306 LLRKAVLKNLY 316
++ K+ Y
Sbjct: 313 FTLESFQKSFY 323
>gi|29029605 purinergic receptor P2Y12 [Homo sapiens]
Length = 342
Score = 49.3 bits (116), Expect = 5e-06
Identities = 64/306 (20%), Positives = 132/306 (43%), Gaps = 28/306 (9%)
Query: 24 TENRLSVFFSVIFMTVGILSNSLAIAILMKAYQRFRQKSKASFLLLASGLVITDFFGHLI 83
T+ + ++V+F VG+++N LA+ I F+ +SK++F++ VI+D L+
Sbjct: 24 TQVLFPLLYTVLFF-VGLITNGLAMRIF------FQIRSKSNFIIFLKNTVISD----LL 72
Query: 84 NGAIAVFVYASDKEWIRFDQSNVLCSIFGICMVFSGLCPLLLGSVMAIERCIGVTKPIFH 143
F SD + +C + + F+ + ++ I+R T+P
Sbjct: 73 MILTFPFKILSDAKLGTGPLRTFVCQVTSVIFYFTMYISISFLGLITIDRYQKTTRPFKT 132
Query: 144 STKITSKHVKMMLSGVCLFAVFIALLP--ILGHRDYKIQASRTWCFYNTEDIKDWEDRFY 201
S K+ LS V +F+ LP IL +R + + + F +E W +
Sbjct: 133 SNPKNLLGAKI-LSVVIWAFMFLLSLPNMILTNRQPRDKNVKKCSFLKSEFGLVWHE--- 188
Query: 202 LLLFSFLGLLALGVSLLCNAITGITLLRVKFKSQQHRQG--RSHHLEMVIQLLAIMCVSC 259
+ +++ + ++ L + + + ++S +G + ++ +++ I+ V
Sbjct: 189 --IVNYICQVIFWINFLIVIVCYTLITKELYRSYVRTRGVGKVPRKKVNVKVFIIIAVFF 246
Query: 260 ICWSPFLVTMANIGINGNHSLETC--ETTLFALRMAT-W----NQILDPWVYILLRKAVL 312
IC+ PF ++ + C E TLF ++ +T W N LDP++Y L K+
Sbjct: 247 ICFVPFHFARIPYTLSQTRDVFDCTAENTLFYVKESTLWLTSLNACLDPFIYFFLCKSFR 306
Query: 313 KNLYKL 318
+L +
Sbjct: 307 NSLISM 312
>gi|12232483 purinergic receptor P2Y12 [Homo sapiens]
Length = 342
Score = 49.3 bits (116), Expect = 5e-06
Identities = 64/306 (20%), Positives = 132/306 (43%), Gaps = 28/306 (9%)
Query: 24 TENRLSVFFSVIFMTVGILSNSLAIAILMKAYQRFRQKSKASFLLLASGLVITDFFGHLI 83
T+ + ++V+F VG+++N LA+ I F+ +SK++F++ VI+D L+
Sbjct: 24 TQVLFPLLYTVLFF-VGLITNGLAMRIF------FQIRSKSNFIIFLKNTVISD----LL 72
Query: 84 NGAIAVFVYASDKEWIRFDQSNVLCSIFGICMVFSGLCPLLLGSVMAIERCIGVTKPIFH 143
F SD + +C + + F+ + ++ I+R T+P
Sbjct: 73 MILTFPFKILSDAKLGTGPLRTFVCQVTSVIFYFTMYISISFLGLITIDRYQKTTRPFKT 132
Query: 144 STKITSKHVKMMLSGVCLFAVFIALLP--ILGHRDYKIQASRTWCFYNTEDIKDWEDRFY 201
S K+ LS V +F+ LP IL +R + + + F +E W +
Sbjct: 133 SNPKNLLGAKI-LSVVIWAFMFLLSLPNMILTNRQPRDKNVKKCSFLKSEFGLVWHE--- 188
Query: 202 LLLFSFLGLLALGVSLLCNAITGITLLRVKFKSQQHRQG--RSHHLEMVIQLLAIMCVSC 259
+ +++ + ++ L + + + ++S +G + ++ +++ I+ V
Sbjct: 189 --IVNYICQVIFWINFLIVIVCYTLITKELYRSYVRTRGVGKVPRKKVNVKVFIIIAVFF 246
Query: 260 ICWSPFLVTMANIGINGNHSLETC--ETTLFALRMAT-W----NQILDPWVYILLRKAVL 312
IC+ PF ++ + C E TLF ++ +T W N LDP++Y L K+
Sbjct: 247 ICFVPFHFARIPYTLSQTRDVFDCTAENTLFYVKESTLWLTSLNACLDPFIYFFLCKSFR 306
Query: 313 KNLYKL 318
+L +
Sbjct: 307 NSLISM 312
>gi|4502387 opsin 1 (cone pigments), short-wave-sensitive [Homo
sapiens]
Length = 348
Score = 49.3 bits (116), Expect = 5e-06
Identities = 68/304 (22%), Positives = 126/304 (41%), Gaps = 29/304 (9%)
Query: 29 SVFFSVIFMTVGILSNSLAIAILMKAYQRFRQKSKASFLLLASGLVITDFFGHL--INGA 86
+ F +F+ +G N++ + ++ Y++ RQ L LV F G L I
Sbjct: 38 AAFMGTVFL-IGFPLNAMVLVATLR-YKKLRQP-------LNYILVNVSFGGFLLCIFSV 88
Query: 87 IAVFVYASDKEWIRFDQSNVLCSIFGICMVFSGLCPLLLGSVMAIERCIGVTKPIFHSTK 146
VFV AS + F + +C++ G +GL + +A ER I + KP F + +
Sbjct: 89 FPVFV-ASCNGYFVFGRH--VCALEGFLGTVAGLVTGWSLAFLAFERYIVICKP-FGNFR 144
Query: 147 ITSKHVKMMLSGVCLFAVFIALLPILGHRDYKIQASRTWCF--YNTEDIKDWEDRFYLLL 204
+SKH ++ + +++ P G + + + C + T K + + L
Sbjct: 145 FSSKHALTVVLATWTIGIGVSIPPFFGWSRFIPEGLQCSCGPDWYTVGTKYRSESYTWFL 204
Query: 205 FSFLGLLALGVSLLCNAITGITLLRVKFKSQQHRQGRSHHLEMVIQLLAIMCVS--CICW 262
F F ++ L SL+C + T + +QQ + E + + ++ V C+C+
Sbjct: 205 FIFCFIVPL--SLICFSYTQLLRALKAVAAQQQESATTQKAEREVSRMVVVMVGSFCVCY 262
Query: 263 SPFLVTMANIGINGNHSLETCETTL--FALRMATWNQILDPWVYILLRKAVLKNLYKLAS 320
P+ + N NH L+ T+ F + A I +P +Y + K + K+
Sbjct: 263 VPYAAFAMYMVNNRNHGLDLRLVTIPSFFSKSAC---IYNPIIYCFMNKQFQACIMKMV- 318
Query: 321 QCCG 324
CG
Sbjct: 319 --CG 320
>gi|157426873 tachykinin receptor 2 [Homo sapiens]
Length = 398
Score = 48.1 bits (113), Expect = 1e-05
Identities = 60/295 (20%), Positives = 124/295 (42%), Gaps = 25/295 (8%)
Query: 39 VGILSNSLAIAILMKAYQRFRQKSKASFLLLASGLVITDFFGHLINGAIAVFVYASDKEW 98
V + N++ I I++ A++R R + + LA + F N FVYAS W
Sbjct: 46 VAVTGNAIVIWIIL-AHRRMRTVTNYFIVNLALADLCMAAFNAAFN-----FVYASHNIW 99
Query: 99 IRFDQSNVLCSIFGICMVFSGLCPLLLGSVMAIERCIGVTKPIFHSTKITSKHVKMMLSG 158
++F I +F + + + +A +R + + P ++++ K +++G
Sbjct: 100 YFGRAFCYFQNLFPITAMFVSIYSM---TAIAADRYMAIVHPF--QPRLSAPSTKAVIAG 154
Query: 159 VCLFAVFIALLPILGHRDYKIQASRTWCFYNTEDIKDWEDR--FYLLLFSFLGLLALGVS 216
+ L A+ +A P + + T C + + ++L++ + + L L V
Sbjct: 155 IWLVALALAS-PQCFYSTVTMDQGATKCVVAWPEDSGGKTLLLYHLVVIALIYFLPLAVM 213
Query: 217 LLCNAITGITLLRVKFKSQQHRQGRSHHLE----MVIQLLAIMCVSCICWSP----FLVT 268
+ ++ G+TL R Q HL+ V ++ ++ ICW P F++
Sbjct: 214 FVAYSVIGLTLWRRAVPGHQAHGANLRHLQAMKKFVKTMVLVVLTFAICWLPYHLYFILG 273
Query: 269 MANIGINGNHSLETCETTLFALRMATWNQILDPWVYILLRKAVLKNLYKLASQCC 323
I + ++ LF L M+ + + +P +Y L ++ ++LA +CC
Sbjct: 274 SFQEDIYCHKFIQQVYLALFWLAMS--STMYNPIIYCCLNHR-FRSGFRLAFRCC 325
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.328 0.137 0.422
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,367,942
Number of Sequences: 37866
Number of extensions: 428665
Number of successful extensions: 1637
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 150
Number of HSP's that attempted gapping in prelim test: 1472
Number of HSP's gapped (non-prelim): 234
length of query: 359
length of database: 18,247,518
effective HSP length: 103
effective length of query: 256
effective length of database: 14,347,320
effective search space: 3672913920
effective search space used: 3672913920
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.