Guide to the Human Genome
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Name: PGAM1 Sequence: fasta or formatted (254aa) NCBI GI: 4505753
Description:

bisphosphoglycerate mutase 1

Referenced in:

Additional Brain Proteins
Glycolysis

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.8         25           2
 C cysteine            0.8          2           1
 D aspartate           5.5         14           1
 E glutamate           8.7         22           2
 F phenylalanine       2.4          6           1
 G glycine             6.7         17           2
 H histidine           2.8          7           1
 I isoleucine          5.9         15           1
 K lysine              7.1         18           2
 L leucine             9.4         24           1
 M methionine          2.4          6           1
 N asparagine          3.5          9           1
 P proline             5.9         15           4
 Q glutamine           3.1          8           1
 R arginine            6.7         17           2
 S serine              4.3         11           1
 T threonine           3.9         10           1
 V valine              5.1         13           2
 W tryptophan          2.8          7           1
 Y tyrosine            3.1          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   bisphosphoglycerate mutase 1 
PGAM4                 0.952   bisphosphoglycerate mutase 4 
PGAM2                 0.825   bisphosphoglycerate mutase 2 
BPGM                  0.561   bisphosphoglycerate mutase 
BPGM                  0.561   bisphosphoglycerate mutase 
PFKFB4                0.038   6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4...
C12orf5               0.028   TP53-induced glycolysis and apoptosis regulator [Homo...
UBASH3B               0.022   ubiquitin associated and SH3 domain containing, B [H...
PFKFB3                0.016   6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3...
PFKFB3                0.016   6-phosphofructo-2-kinase/fructose-2,6-biphosphatase...
PFKFB1                0.016   6-phosphofructo-2-kinase/fructose-2,6-biphosphatase...
PFKFB2                0.014   6-phosphofructo-2-kinase/fructose-2,6-biphosphatase ...
PFKFB2                0.014   6-phosphofructo-2-kinase/fructose-2,6-biphosphatase ...
NAALADL1              0.008   N-acetylated alpha-linked acidic dipeptidase-like 1 ...
HIVEP2                0.006   human immunodeficiency virus type I enhancer bindin...
SH3D19                0.006   SH3 domain containing 19 isoform c 
SH3D19                0.006   SH3 domain containing 19 isoform b 
PGAM5                 0.006   phosphoglycerate mutase family member 5 
FMNL3                 0.006   formin-like 3 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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