Guide to the Human Genome
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Name: DNAJA1 Sequence: fasta or formatted (397aa) NCBI GI: 4504511
Description:

DnaJ (Hsp40) homolog, subfamily A, member 1

Referenced in:

Heat-Shock Proteins and Chaperonins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.3         13           1
 C cysteine            3.3         13           2
 D aspartate           6.5         26           2
 E glutamate           9.3         37           2
 F phenylalanine       3.3         13           2
 G glycine            10.8         43           4
 H histidine           3.0         12           2
 I isoleucine          6.3         25           3
 K lysine              9.1         36           2
 L leucine             6.8         27           2
 M methionine          3.0         12           1
 N asparagine          3.5         14           1
 P proline             4.5         18           1
 Q glutamine           5.8         23           2
 R arginine            6.3         25           3
 S serine              3.0         12           1
 T threonine           3.3         13           2
 V valine              6.0         24           2
 W tryptophan          0.0          0           0
 Y tyrosine            2.8         11           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   DnaJ (Hsp40) homolog, subfamily A, member 1 
DNAJA4                0.731   DnaJ (Hsp40) homolog, subfamily A, member 4 isoform...
DNAJA4                0.731   DnaJ (Hsp40) homolog, subfamily A, member 4 isoform...
DNAJA4                0.633   DnaJ (Hsp40) homolog, subfamily A, member 4 isoform...
DNAJA2                0.529   DnaJ subfamily A member 2 
DNAJB5                0.206   DnaJ (Hsp40) homolog, subfamily B, member 5 isoform...
DNAJB5                0.206   DnaJ (Hsp40) homolog, subfamily B, member 5 isoform...
DNAJB5                0.206   DnaJ (Hsp40) homolog, subfamily B, member 5 isoform ...
DNAJB11               0.203   DnaJ (Hsp40) homolog, subfamily B, member 11 precurso...
DNAJB4                0.199   DnaJ (Hsp40) homolog, subfamily B, member 4 
DNAJB1                0.198   DnaJ (Hsp40) homolog, subfamily B, member 1 
DNAJB13               0.149   testis spermatogenesis apoptosis-related protein 6 [...
DNAJA3                0.127   DnaJ (Hsp40) homolog, subfamily A, member 3 isoform...
DNAJA3                0.127   DnaJ (Hsp40) homolog, subfamily A, member 3 isoform...
DNAJB6                0.108   DnaJ (Hsp40) homolog, subfamily B, member 6 isoform ...
DNAJB6                0.108   DnaJ (Hsp40) homolog, subfamily B, member 6 isoform b...
DNAJB3                0.102   DnaJ (Hsp40) homolog, subfamily B, member 3 
DNAJB8                0.096   DnaJ homolog, subfamily B, member 8 
DNAJB12               0.088   DnaJ (Hsp40) homolog, subfamily B, member 12 
DNAJB12               0.088   DnaJ (Hsp40) homolog, subfamily B, member 12 
DNAJB7                0.083   DnaJ (Hsp40) homolog, subfamily B, member 7 
DNAJB2                0.083   DnaJ (Hsp40) homolog, subfamily B, member 2 isoform ...
DNAJB2                0.083   DnaJ (Hsp40) homolog, subfamily B, member 2 isoform ...
DNAJC7                0.078   DnaJ (Hsp40) homolog, subfamily C, member 7 isoform...
DNAJC7                0.078   DnaJ (Hsp40) homolog, subfamily C, member 7 isoform...
DNAJB14               0.078   DnaJ (Hsp40) homolog, subfamily B, member 14 isoform...
DNAJB9                0.075   DnaJ (Hsp40) homolog, subfamily B, member 9 
DNAJC5                0.070   DnaJ (Hsp40) homolog, subfamily C, member 5 
DNAJC18               0.068   DnaJ (Hsp40) homolog, subfamily C, member 18 
DNAJC21               0.066   DnaJ homology subfamily A member 5 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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