BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|4503327 cytochrome b5 reductase 3 isoform m [Homo sapiens] (301 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|4503327 cytochrome b5 reductase 3 isoform m [Homo sapiens] 623 e-179 gi|193794826 cytochrome b5 reductase 3 isoform s [Homo sapiens] 577 e-165 gi|6552328 cytochrome b5 reductase 3 isoform s [Homo sapiens] 577 e-165 gi|49574502 cytochrome b5 reductase 1 [Homo sapiens] 375 e-104 gi|47778923 cytochrome b5 reductase b5R.2 [Homo sapiens] 350 1e-96 gi|84875541 cytochrome b5 reductase 4 [Homo sapiens] 105 5e-23 gi|134133308 cytochrome b5 reductase-like [Homo sapiens] 94 1e-19 gi|19923907 oxidoreductase NAD-binding domain containing 1 [Homo... 41 0.001 gi|239753578 PREDICTED: similar to cartilage associated protein ... 31 1.5 gi|13994335 Mix-like homeobox protein 1 [Homo sapiens] 30 2.6 gi|21361380 EAP30 subunit of ELL complex [Homo sapiens] 29 4.4 gi|95147333 phospholipase C, beta 2 [Homo sapiens] 29 5.8 gi|113204617 skeletal muscle ryanodine receptor isoform 2 [Homo ... 29 5.8 gi|113204615 skeletal muscle ryanodine receptor isoform 1 [Homo ... 29 5.8 gi|21735569 claspin [Homo sapiens] 28 9.9 >gi|4503327 cytochrome b5 reductase 3 isoform m [Homo sapiens] Length = 301 Score = 623 bits (1607), Expect = e-179 Identities = 301/301 (100%), Positives = 301/301 (100%) Query: 1 MGAQLSTLGHMVLFPVWFLYSLLMKLFQRSTPAITLESPDIKYPLRLIDREIISHDTRRF 60 MGAQLSTLGHMVLFPVWFLYSLLMKLFQRSTPAITLESPDIKYPLRLIDREIISHDTRRF Sbjct: 1 MGAQLSTLGHMVLFPVWFLYSLLMKLFQRSTPAITLESPDIKYPLRLIDREIISHDTRRF 60 Query: 61 RFALPSPQHILGLPVGQHIYLSARIDGNLVVRPYTPISSDDDKGFVDLVIKVYFKDTHPK 120 RFALPSPQHILGLPVGQHIYLSARIDGNLVVRPYTPISSDDDKGFVDLVIKVYFKDTHPK Sbjct: 61 RFALPSPQHILGLPVGQHIYLSARIDGNLVVRPYTPISSDDDKGFVDLVIKVYFKDTHPK 120 Query: 121 FPAGGKMSQYLESMQIGDTIEFRGPSGLLVYQGKGKFAIRPDKKSNPIIRTVKSVGMIAG 180 FPAGGKMSQYLESMQIGDTIEFRGPSGLLVYQGKGKFAIRPDKKSNPIIRTVKSVGMIAG Sbjct: 121 FPAGGKMSQYLESMQIGDTIEFRGPSGLLVYQGKGKFAIRPDKKSNPIIRTVKSVGMIAG 180 Query: 181 GTGITPMLQVIRAIMKDPDDHTVCHLLFANQTEKDILLRPELEELRNKHSARFKLWYTLD 240 GTGITPMLQVIRAIMKDPDDHTVCHLLFANQTEKDILLRPELEELRNKHSARFKLWYTLD Sbjct: 181 GTGITPMLQVIRAIMKDPDDHTVCHLLFANQTEKDILLRPELEELRNKHSARFKLWYTLD 240 Query: 241 RAPEAWDYGQGFVNEEMIRDHLPPPEEEPLVLMCGPPPMIQYACLPNLDHVGHPTERCFV 300 RAPEAWDYGQGFVNEEMIRDHLPPPEEEPLVLMCGPPPMIQYACLPNLDHVGHPTERCFV Sbjct: 241 RAPEAWDYGQGFVNEEMIRDHLPPPEEEPLVLMCGPPPMIQYACLPNLDHVGHPTERCFV 300 Query: 301 F 301 F Sbjct: 301 F 301 >gi|193794826 cytochrome b5 reductase 3 isoform s [Homo sapiens] Length = 278 Score = 577 bits (1486), Expect = e-165 Identities = 278/278 (100%), Positives = 278/278 (100%) Query: 24 MKLFQRSTPAITLESPDIKYPLRLIDREIISHDTRRFRFALPSPQHILGLPVGQHIYLSA 83 MKLFQRSTPAITLESPDIKYPLRLIDREIISHDTRRFRFALPSPQHILGLPVGQHIYLSA Sbjct: 1 MKLFQRSTPAITLESPDIKYPLRLIDREIISHDTRRFRFALPSPQHILGLPVGQHIYLSA 60 Query: 84 RIDGNLVVRPYTPISSDDDKGFVDLVIKVYFKDTHPKFPAGGKMSQYLESMQIGDTIEFR 143 RIDGNLVVRPYTPISSDDDKGFVDLVIKVYFKDTHPKFPAGGKMSQYLESMQIGDTIEFR Sbjct: 61 RIDGNLVVRPYTPISSDDDKGFVDLVIKVYFKDTHPKFPAGGKMSQYLESMQIGDTIEFR 120 Query: 144 GPSGLLVYQGKGKFAIRPDKKSNPIIRTVKSVGMIAGGTGITPMLQVIRAIMKDPDDHTV 203 GPSGLLVYQGKGKFAIRPDKKSNPIIRTVKSVGMIAGGTGITPMLQVIRAIMKDPDDHTV Sbjct: 121 GPSGLLVYQGKGKFAIRPDKKSNPIIRTVKSVGMIAGGTGITPMLQVIRAIMKDPDDHTV 180 Query: 204 CHLLFANQTEKDILLRPELEELRNKHSARFKLWYTLDRAPEAWDYGQGFVNEEMIRDHLP 263 CHLLFANQTEKDILLRPELEELRNKHSARFKLWYTLDRAPEAWDYGQGFVNEEMIRDHLP Sbjct: 181 CHLLFANQTEKDILLRPELEELRNKHSARFKLWYTLDRAPEAWDYGQGFVNEEMIRDHLP 240 Query: 264 PPEEEPLVLMCGPPPMIQYACLPNLDHVGHPTERCFVF 301 PPEEEPLVLMCGPPPMIQYACLPNLDHVGHPTERCFVF Sbjct: 241 PPEEEPLVLMCGPPPMIQYACLPNLDHVGHPTERCFVF 278 >gi|6552328 cytochrome b5 reductase 3 isoform s [Homo sapiens] Length = 278 Score = 577 bits (1486), Expect = e-165 Identities = 278/278 (100%), Positives = 278/278 (100%) Query: 24 MKLFQRSTPAITLESPDIKYPLRLIDREIISHDTRRFRFALPSPQHILGLPVGQHIYLSA 83 MKLFQRSTPAITLESPDIKYPLRLIDREIISHDTRRFRFALPSPQHILGLPVGQHIYLSA Sbjct: 1 MKLFQRSTPAITLESPDIKYPLRLIDREIISHDTRRFRFALPSPQHILGLPVGQHIYLSA 60 Query: 84 RIDGNLVVRPYTPISSDDDKGFVDLVIKVYFKDTHPKFPAGGKMSQYLESMQIGDTIEFR 143 RIDGNLVVRPYTPISSDDDKGFVDLVIKVYFKDTHPKFPAGGKMSQYLESMQIGDTIEFR Sbjct: 61 RIDGNLVVRPYTPISSDDDKGFVDLVIKVYFKDTHPKFPAGGKMSQYLESMQIGDTIEFR 120 Query: 144 GPSGLLVYQGKGKFAIRPDKKSNPIIRTVKSVGMIAGGTGITPMLQVIRAIMKDPDDHTV 203 GPSGLLVYQGKGKFAIRPDKKSNPIIRTVKSVGMIAGGTGITPMLQVIRAIMKDPDDHTV Sbjct: 121 GPSGLLVYQGKGKFAIRPDKKSNPIIRTVKSVGMIAGGTGITPMLQVIRAIMKDPDDHTV 180 Query: 204 CHLLFANQTEKDILLRPELEELRNKHSARFKLWYTLDRAPEAWDYGQGFVNEEMIRDHLP 263 CHLLFANQTEKDILLRPELEELRNKHSARFKLWYTLDRAPEAWDYGQGFVNEEMIRDHLP Sbjct: 181 CHLLFANQTEKDILLRPELEELRNKHSARFKLWYTLDRAPEAWDYGQGFVNEEMIRDHLP 240 Query: 264 PPEEEPLVLMCGPPPMIQYACLPNLDHVGHPTERCFVF 301 PPEEEPLVLMCGPPPMIQYACLPNLDHVGHPTERCFVF Sbjct: 241 PPEEEPLVLMCGPPPMIQYACLPNLDHVGHPTERCFVF 278 >gi|49574502 cytochrome b5 reductase 1 [Homo sapiens] Length = 305 Score = 375 bits (963), Expect = e-104 Identities = 173/270 (64%), Positives = 218/270 (80%) Query: 32 PAITLESPDIKYPLRLIDREIISHDTRRFRFALPSPQHILGLPVGQHIYLSARIDGNLVV 91 P +TL P+ KY LRL+D+ +SH+T+RFRFALP+ H LGLPVG+HIYLS RIDG+LV+ Sbjct: 36 PQVTLLDPNEKYLLRLLDKTTVSHNTKRFRFALPTAHHTLGLPVGKHIYLSTRIDGSLVI 95 Query: 92 RPYTPISSDDDKGFVDLVIKVYFKDTHPKFPAGGKMSQYLESMQIGDTIEFRGPSGLLVY 151 RPYTP++SD+D+G+VDLVIKVY K HPKFP GGKMSQYL+S+++GD +EFRGPSGLL Y Sbjct: 96 RPYTPVTSDEDQGYVDLVIKVYLKGVHPKFPEGGKMSQYLDSLKVGDVVEFRGPSGLLTY 155 Query: 152 QGKGKFAIRPDKKSNPIIRTVKSVGMIAGGTGITPMLQVIRAIMKDPDDHTVCHLLFANQ 211 GKG F I+P+KKS P R K +GMIAGGTGITPMLQ+IRAI+K P+D T C LLFANQ Sbjct: 156 TGKGHFNIQPNKKSPPEPRVAKKLGMIAGGTGITPMLQLIRAILKVPEDPTQCFLLFANQ 215 Query: 212 TEKDILLRPELEELRNKHSARFKLWYTLDRAPEAWDYGQGFVNEEMIRDHLPPPEEEPLV 271 TEKDI+LR +LEEL+ ++ RFKLW+TLD P+ W Y +GFV +MIR+HLP P ++ LV Sbjct: 216 TEKDIILREDLEELQARYPNRFKLWFTLDHPPKDWAYSKGFVTADMIREHLPAPGDDVLV 275 Query: 272 LMCGPPPMIQYACLPNLDHVGHPTERCFVF 301 L+CGPPPM+Q AC PNLD +G+ + F + Sbjct: 276 LLCGPPPMVQLACHPNLDKLGYSQKMRFTY 305 >gi|47778923 cytochrome b5 reductase b5R.2 [Homo sapiens] Length = 276 Score = 350 bits (897), Expect = 1e-96 Identities = 163/273 (59%), Positives = 203/273 (74%) Query: 29 RSTPAITLESPDIKYPLRLIDREIISHDTRRFRFALPSPQHILGLPVGQHIYLSARIDGN 88 R ITL+ P+ KYPL LI++E ISH+TRRFRF LPSP H+LGLPVG ++ L A+ID Sbjct: 4 RRREPITLQDPEAKYPLPLIEKEKISHNTRRFRFGLPSPDHVLGLPVGNYVQLLAKIDNE 63 Query: 89 LVVRPYTPISSDDDKGFVDLVIKVYFKDTHPKFPAGGKMSQYLESMQIGDTIEFRGPSGL 148 LVVR YTP+SSDDD+GFVDL+IK+YFK+ HP++P GGKM+QYLE+M+IG+TI FRGP G Sbjct: 64 LVVRAYTPVSSDDDRGFVDLIIKIYFKNVHPQYPEGGKMTQYLENMKIGETIFFRGPRGR 123 Query: 149 LVYQGKGKFAIRPDKKSNPIIRTVKSVGMIAGGTGITPMLQVIRAIMKDPDDHTVCHLLF 208 L Y G G IRPD+ S P +GMIAGGTGITPMLQ+IR I KDP D T L+F Sbjct: 124 LFYHGPGNLGIRPDQTSEPKKTLADHLGMIAGGTGITPMLQLIRHITKDPSDRTRMSLIF 183 Query: 209 ANQTEKDILLRPELEELRNKHSARFKLWYTLDRAPEAWDYGQGFVNEEMIRDHLPPPEEE 268 ANQTE+DIL+R ELEE+ H +F LWYTLDR P W Y GFV +MI++HLPPP + Sbjct: 184 ANQTEEDILVRKELEEIARTHPDQFNLWYTLDRPPIGWKYSSGFVTADMIKEHLPPPAKS 243 Query: 269 PLVLMCGPPPMIQYACLPNLDHVGHPTERCFVF 301 L+L+CGPPP+IQ A PNL+ +G+ + F + Sbjct: 244 TLILVCGPPPLIQTAAHPNLEKLGYTQDMIFTY 276 >gi|84875541 cytochrome b5 reductase 4 [Homo sapiens] Length = 521 Score = 105 bits (262), Expect = 5e-23 Identities = 73/242 (30%), Positives = 119/242 (49%), Gaps = 26/242 (10%) Query: 46 RLIDREIISHDTRRFRFALPSPQHILGLPVGQHIYLSARIDGNLVVRPYTPISSDDDKGF 105 +LI +E ++HDTR F LP H L +P+GQH+YL I G +V+PYTP+S F Sbjct: 279 QLISKEDVTHDTRLFCLMLPPSTH-LQVPIGQHVYLKLPITGTEIVKPYTPVSGSLLSEF 337 Query: 106 VDLVIK----VYFKDTHPKFPAGGKMSQYLESMQIGDTIEFRGPSGLLVYQGKGKFAIRP 161 + V+ +YF K G + L+ +QIGD + P +G F I Sbjct: 338 KEPVLPNNKYIYFLI---KIYPTGLFTPELDRLQIGDFVSVSSP--------EGNFKISK 386 Query: 162 DKKSNPIIRTVKSVGMIAGGTGITPMLQVIRAIMKDPDDHTVCHLLFANQTEKDILLRPE 221 + ++ + ++A GTG TPM++++ + D L+F N+TE DI+ R + Sbjct: 387 -------FQELEDLFLLAAGTGFTPMVKILNYALTDIPSLRKVKLMFFNKTEDDIIWRSQ 439 Query: 222 LEELRNKHSARFKLWYTLDRAPEAWDYGQGFVNEEMIRDHLPP--PEEEPLVLMCGPPPM 279 LE+L K R + + L W+ QG ++ ++ + L + + LV +CGP P Sbjct: 440 LEKLAFK-DKRLDVEFVLSAPISEWNGKQGHISPALLSEFLKRNLDKSKVLVCICGPVPF 498 Query: 280 IQ 281 + Sbjct: 499 TE 500 >gi|134133308 cytochrome b5 reductase-like [Homo sapiens] Length = 315 Score = 94.4 bits (233), Expect = 1e-19 Identities = 68/244 (27%), Positives = 121/244 (49%), Gaps = 32/244 (13%) Query: 38 SPDIKYPLRLIDREIISHDTRRFRFALPSPQHILGLPVGQHIYLSARIDGNLVVRPYTPI 97 +P+ +I + ++ DT R RFALP LGL GQH+ L +D + R YTPI Sbjct: 73 NPETFVAFCIIAMDRLTKDTYRVRFALPGNSQ-LGLRPGQHLILRGIVDDLEIQRAYTPI 131 Query: 98 SSDDDKGFVDLVIKVYFKDTHPKFPAGGKMSQYLESMQIGDTIEFRGPSGLLVYQGKGKF 157 S + +G+ +++IK Y G MS+Y+ES ++GDT +RGP G F Sbjct: 132 SPANAEGYFEVLIKCY---------QMGLMSRYVESWRVGDTAFWRGPF--------GDF 174 Query: 158 AIRPDKKSNPIIRTVKSVGMIAGGTGITPMLQVIRAIMKDPDDHTVCHLLFANQTEKDIL 217 +P++ + ++A GTG+ PM+ ++++I + +D T L+ +T + I Sbjct: 175 FYKPNQYGELL--------LLAAGTGLAPMVPILQSITDNENDETFVTLVGCFKTFESIY 226 Query: 218 LRPELEELRNKHSARFKLWYTLDRAPE--AWDYGQ----GFVNEEMIRDHLPPPEEEPLV 271 L+ L+E + R + + + E W Y + G + +++I++ + +P Sbjct: 227 LKTFLQEQARFWNVRTFFVLSQESSSEQLPWSYQEKTHFGHLGQDLIKELVSCCRRKPFA 286 Query: 272 LMCG 275 L+CG Sbjct: 287 LVCG 290 >gi|19923907 oxidoreductase NAD-binding domain containing 1 [Homo sapiens] Length = 312 Score = 41.2 bits (95), Expect = 0.001 Identities = 31/125 (24%), Positives = 58/125 (46%), Gaps = 18/125 (14%) Query: 173 KSVGMIAGGTGITPMLQVIR---------AIMKDPDDHTVCHLLFANQTEKDILLRPELE 223 +++ +IAGG GI P+L ++R A ++ + L ++ + ++L + + Sbjct: 170 RNLVLIAGGVGINPLLSILRHAADLLREQANKRNGYEIGTIKLFYSAKNTSELLFKKNIL 229 Query: 224 ELRNKHSARFK-----LWYTLDRAPEAWDY-GQGFVNEEMIRDHLPPPEEEPLVLMCGPP 277 +L N+ + T E Y +G + E+ IRDH+ +E L +CGPP Sbjct: 230 DLVNEFPEKIACSLHVTKQTTQINAELKPYITEGRITEKEIRDHI---SKETLFYICGPP 286 Query: 278 PMIQY 282 PM + Sbjct: 287 PMTDF 291 >gi|239753578 PREDICTED: similar to cartilage associated protein [Homo sapiens] Length = 241 Score = 30.8 bits (68), Expect = 1.5 Identities = 17/54 (31%), Positives = 23/54 (42%), Gaps = 2/54 (3%) Query: 236 WYTLDRAPEAWDYGQGFVNEEMIRDHLPPPEEEPLVLMCGPPPMIQYACLPNLD 289 ++ + P+ WDY Q E MI H+ P +L GPP LP D Sbjct: 155 YFKANNLPKCWDYKQPGNRETMI--HVQSPRRVIKLLKAGPPDCSSKGSLPRED 206 >gi|13994335 Mix-like homeobox protein 1 [Homo sapiens] Length = 232 Score = 30.0 bits (66), Expect = 2.6 Identities = 26/90 (28%), Positives = 36/90 (40%), Gaps = 4/90 (4%) Query: 206 LLFANQTEKDILLRPELEELRNKHSARFKLWYTLDRAPEAWDYGQGF---VNEEMIRDHL 262 L+F DI LR L L +R ++W+ RA G+ F E+I +H Sbjct: 103 LVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQSGKSFQPLARPEIILNHC 162 Query: 263 PPPEEEPLVLMCGPPPMIQYACLPNLDHVG 292 P E L P + CLP + VG Sbjct: 163 APGTETK-CLKPQLPLEVDVNCLPEPNGVG 191 >gi|21361380 EAP30 subunit of ELL complex [Homo sapiens] Length = 258 Score = 29.3 bits (64), Expect = 4.4 Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 5/57 (8%) Query: 150 VYQGKGKFAIRPDKKSNPIIRTVKSVGMIAGGTGITPM--LQVIRAIMKDPD-DHTV 203 V +G+GKFA D + +IR +K + + G GI P+ +I+++ + + DHTV Sbjct: 128 VLKGRGKFA--QDVSQDDLIRAIKKLKALGTGFGIIPVGGTYLIQSVPAELNMDHTV 182 >gi|95147333 phospholipase C, beta 2 [Homo sapiens] Length = 1185 Score = 28.9 bits (63), Expect = 5.8 Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 11/48 (22%) Query: 141 EFRGPSGLLVYQGKGKFAIRPDKKSNP--------IIRTVKSVGMIAG 180 EF G SG L+ K +F RPDK+ NP ++ T S+ +I+G Sbjct: 647 EFNGQSGYLL---KHEFMRRPDKQFNPFSVDRIDVVVATTLSITVISG 691 >gi|113204617 skeletal muscle ryanodine receptor isoform 2 [Homo sapiens] Length = 5033 Score = 28.9 bits (63), Expect = 5.8 Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 10/68 (14%) Query: 216 ILLRPELEELRNKHSARFKLWYTLDRAPEAWDYGQGFVNEEMIRDH--------LPPPEE 267 I+L P LE +R K + + L R + W YG V ++ R H LP PE Sbjct: 860 IVLPPHLERIREKLAENIHELWALTRIEQGWTYGP--VRDDNKRLHPCLVDFHSLPEPER 917 Query: 268 EPLVLMCG 275 + M G Sbjct: 918 NYNLQMSG 925 >gi|113204615 skeletal muscle ryanodine receptor isoform 1 [Homo sapiens] Length = 5038 Score = 28.9 bits (63), Expect = 5.8 Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 10/68 (14%) Query: 216 ILLRPELEELRNKHSARFKLWYTLDRAPEAWDYGQGFVNEEMIRDH--------LPPPEE 267 I+L P LE +R K + + L R + W YG V ++ R H LP PE Sbjct: 860 IVLPPHLERIREKLAENIHELWALTRIEQGWTYGP--VRDDNKRLHPCLVDFHSLPEPER 917 Query: 268 EPLVLMCG 275 + M G Sbjct: 918 NYNLQMSG 925 >gi|21735569 claspin [Homo sapiens] Length = 1339 Score = 28.1 bits (61), Expect = 9.9 Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 1/76 (1%) Query: 217 LLRPELEELRNKHSARFKLWYTLDRAPEAWDYGQGFVNEEMIRDHLPPPEEEPLVLMCGP 276 +L+ E L N HS ++ + P A + G+G N E + + PE++ GP Sbjct: 427 VLQQESNFLGNNHSEECQVGGLVAFEPHALE-GEGPQNPEETDEKVEEPEQQNKSSAVGP 485 Query: 277 PPMIQYACLPNLDHVG 292 P ++ L L +G Sbjct: 486 PEKVRRFTLDRLKQLG 501 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.324 0.143 0.445 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 13,547,048 Number of Sequences: 37866 Number of extensions: 687366 Number of successful extensions: 1462 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 7 Number of HSP's successfully gapped in prelim test: 8 Number of HSP's that attempted gapping in prelim test: 1448 Number of HSP's gapped (non-prelim): 15 length of query: 301 length of database: 18,247,518 effective HSP length: 102 effective length of query: 199 effective length of database: 14,385,186 effective search space: 2862652014 effective search space used: 2862652014 T: 11 A: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (22.0 bits) S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.