Guide to the Human Genome
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Name: CRYBB1 Sequence: fasta or formatted (252aa) NCBI GI: 4503061
Description:

crystallin, beta B1

Referenced in:

Crystallins and Other Eye Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.3         21           2
 C cysteine            0.4          1           1
 D aspartate           4.0         10           2
 E glutamate           6.3         16           1
 F phenylalanine       5.6         14           1
 G glycine             9.5         24           1
 H histidine           1.2          3           1
 I isoleucine          3.2          8           2
 K lysine              4.4         11           1
 L leucine             6.0         15           2
 M methionine          2.0          5           1
 N asparagine          3.6          9           1
 P proline             7.9         20           2
 Q glutamine           4.4         11           1
 R arginine            6.7         17           2
 S serine              9.5         24           3
 T threonine           4.8         12           2
 V valine              5.6         14           2
 W tryptophan          3.2          8           1
 Y tyrosine            3.6          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   crystallin, beta B1 
CRYBB3                0.455   crystallin, beta B3 
CRYBB2                0.427   crystallin, beta B2 
CRYBA1                0.341   crystallin, beta A3 
CRYBA2                0.281   crystallin, beta A2 
CRYBA2                0.281   crystallin, beta A2 
CRYBA2                0.281   crystallin, beta A2 
CRYBA4                0.279   crystallin, beta A4 
CRYGS                 0.188   crystallin, gamma S 
AIM1L                 0.174   absent in melanoma 1-like 
CRYGC                 0.174   crystallin, gamma C 
CRYGA                 0.166   crystallin, gamma A 
CRYGB                 0.164   crystallin, gamma B 
CRYBG3                0.162   beta-gamma crystallin domain containing 3 
CRYGD                 0.156   crystallin, gamma D 
CRYGN                 0.148   gammaN-crystallin 
AIM1                  0.146   absent in melanoma 1 
TMEM108               0.018   transmembrane protein 108 
TMEM108               0.018   transmembrane protein 108 
MUC2                  0.014   mucin 2 precursor 
YLPM1                 0.014   YLP motif containing 1 
PLXNB1                0.014   plexin B1 
PLXNB1                0.014   plexin B1 
ARMCX2                0.014   ALEX2 protein 
ARMCX2                0.014   ALEX2 protein 
SMARCC1               0.014   SWI/SNF-related matrix-associated actin-dependent r...
C15orf39              0.012   hypothetical protein LOC56905 
NACA                  0.012   nascent polypeptide-associated complex alpha subuni...
LOC100132635          0.012   PREDICTED: similar to mucin 5, partial 
PRR12                 0.012   proline rich 12 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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