Guide to the Human Genome
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Name: CRYAA Sequence: fasta or formatted (173aa) NCBI GI: 4503055
Description:

crystallin, alpha A

Referenced in:

Crystallins and Other Eye Proteins
Heat-Shock Proteins and Chaperonins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.5          6           1
 C cysteine            1.2          2           1
 D aspartate           8.7         15           2
 E glutamate           5.8         10           2
 F phenylalanine       8.1         14           2
 G glycine             5.2          9           1
 H histidine           4.0          7           1
 I isoleucine          4.6          8           1
 K lysine              4.0          7           1
 L leucine             8.7         15           2
 M methionine          1.2          2           1
 N asparagine          1.2          2           1
 P proline             6.4         11           1
 Q glutamine           4.0          7           1
 R arginine            7.5         13           2
 S serine             11.0         19           2
 T threonine           5.2          9           1
 V valine              5.8         10           1
 W tryptophan          0.6          1           1
 Y tyrosine            3.5          6           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   crystallin, alpha A 
CRYAB                 0.491   crystallin, alpha B 
HSPB6                 0.316   heat shock protein, alpha-crystallin-related, B6 [Ho...
HSPB1                 0.250   heat shock protein beta-1 
HSPB2                 0.208   heat shock 27kDa protein 2 
HSPB8                 0.127   heat shock 22kDa protein 8 
HSPB3                 0.120   heat shock 27kDa protein 3 
HSPB7                 0.063   cardiovascular heat shock protein 
HSPB9                 0.060   heat shock protein, alpha-crystallin-related, B9 [Ho...
PLCXD3                0.012   phosphatidylinositol-specific phospholipase C, X dom...
SNX6                  0.009   sorting nexin 6 isoform b 
CHRNB2                0.006   neuronal nicotinic acetylcholine receptor beta 2 prec...
FAM65A                0.006   hypothetical protein LOC79567 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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