Guide to the Human Genome
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Name: AVPR1A Sequence: fasta or formatted (418aa) NCBI GI: 4502331
Description:

arginine vasopressin receptor 1A

Referenced in:

Cardiovascular System
Peptide and Protein G-coupled Signals

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.6         36           3
 C cysteine            3.3         14           2
 D aspartate           2.9         12           1
 E glutamate           2.9         12           2
 F phenylalanine       5.7         24           2
 G glycine             5.5         23           2
 H histidine           1.4          6           1
 I isoleucine          5.3         22           2
 K lysine              4.3         18           1
 L leucine             7.4         31           2
 M methionine          3.8         16           1
 N asparagine          4.1         17           2
 P proline             5.5         23           2
 Q glutamine           3.6         15           2
 R arginine            5.7         24           2
 S serine              9.1         38           2
 T threonine           6.5         27           1
 V valine              8.4         35           2
 W tryptophan          3.6         15           2
 Y tyrosine            2.4         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   arginine vasopressin receptor 1A 
AVPR1B                0.407   arginine vasopressin receptor 1B 
OXTR                  0.399   oxytocin receptor 
AVPR2                 0.270   arginine vasopressin receptor 2 isoform 1 
AVPR2                 0.238   arginine vasopressin receptor 2 isoform 2 
NPSR1                 0.151   G protein-coupled receptor for asthma susceptibility...
NPSR1                 0.151   G protein-coupled receptor for asthma susceptibility...
GNRHR                 0.130   gonadotropin-releasing hormone receptor isoform 1 [Ho...
HCRTR2                0.105   orexin receptor 2 
CCKAR                 0.105   cholecystokinin A receptor 
QRFPR                 0.098   G protein-coupled receptor 103 
OPRD1                 0.093   opioid receptor, delta 1 
HCRTR1                0.089   orexin receptor 1 
SSTR4                 0.089   somatostatin receptor 4 
OPRM1                 0.087   opioid receptor, mu 1 isoform MOR-1O 
OPRM1                 0.086   opioid receptor, mu 1 isoform MOR-1B3 
OPRM1                 0.085   opioid receptor, mu 1 isoform MOR-1H 
OPRM1                 0.085   opioid receptor, mu 1 isoform MOR-1 
OPRM1                 0.085   opioid receptor, mu 1 isoform MOR-1B5 
OPRM1                 0.085   opioid receptor, mu 1 isoform MOR-1B2 
OPRM1                 0.085   opioid receptor, mu 1 isoform MOR-1B1 
OPRM1                 0.085   opioid receptor, mu 1 isoform MOR-1A 
OPRM1                 0.085   opioid receptor, mu 1 isoform MOR-1B4 
OPRM1                 0.085   opioid receptor, mu 1 isoform MOR-1X 
GALR1                 0.085   galanin receptor 1 
SSTR1                 0.085   somatostatin receptor 1 
SSTR5                 0.083   somatostatin receptor 5 
APLNR                 0.082   apelin receptor 
OPRL1                 0.082   opiate receptor-like 1 
OPRL1                 0.082   opiate receptor-like 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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