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Search of human proteins with 4502049
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4502049 aldo-keto reductase family 1, member B1 [Homo
sapiens]
(316 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4502049 aldo-keto reductase family 1, member B1 [Homo sapiens] 650 0.0
gi|223468663 aldo-keto reductase family 1, member B10 [Homo sapi... 475 e-134
gi|122937516 aldo-keto reductase family 1, member B10-like [Homo... 451 e-127
gi|93277124 aldo-keto reductase family 1, member C-like 2 [Homo ... 367 e-101
gi|5174695 aldo-keto reductase family 1, member D1 [Homo sapiens] 332 2e-91
gi|24497577 aldo-keto reductase family 1, member A1 [Homo sapiens] 325 3e-89
gi|5174391 aldo-keto reductase family 1, member A1 [Homo sapiens] 325 3e-89
gi|5453543 aldo-keto reductase family 1, member C1 [Homo sapiens] 322 4e-88
gi|45446745 aldo-keto reductase family 1, member C2 [Homo sapiens] 320 8e-88
gi|4503285 aldo-keto reductase family 1, member C2 [Homo sapiens] 320 8e-88
gi|24497585 aldo-keto reductase family 1, member C4 [Homo sapiens] 318 5e-87
gi|24497583 aldo-keto reductase family 1, member C3 [Homo sapiens] 315 4e-86
gi|207028673 hypothetical protein LOC100134257 [Homo sapiens] 119 3e-27
gi|27436962 potassium voltage-gated channel, shaker-related subf... 45 8e-05
gi|27436966 potassium voltage-gated channel, shaker-related subf... 44 2e-04
gi|27436969 potassium voltage-gated channel, shaker-related subf... 44 2e-04
gi|27436964 potassium voltage-gated channel, shaker-related subf... 43 3e-04
gi|4504825 potassium voltage-gated channel, shaker-related subfa... 43 4e-04
gi|56549117 dynamin 1 isoform 2 [Homo sapiens] 32 0.96
gi|59853099 dynamin 1 isoform 1 [Homo sapiens] 32 0.96
gi|149944410 hypothetical protein LOC57587 [Homo sapiens] 32 0.96
gi|27436971 potassium voltage-gated channel, shaker-related subf... 31 1.6
gi|219842266 usherin isoform B [Homo sapiens] 30 2.1
gi|4504011 glutamate-cysteine ligase regulatory protein [Homo sa... 30 2.8
gi|156938336 class II transactivator [Homo sapiens] 29 4.8
>gi|4502049 aldo-keto reductase family 1, member B1 [Homo sapiens]
Length = 316
Score = 650 bits (1677), Expect = 0.0
Identities = 316/316 (100%), Positives = 316/316 (100%)
Query: 1 MASRLLLNNGAKMPILGLGTWKSPPGQVTEAVKVAIDVGYRHIDCAHVYQNENEVGVAIQ 60
MASRLLLNNGAKMPILGLGTWKSPPGQVTEAVKVAIDVGYRHIDCAHVYQNENEVGVAIQ
Sbjct: 1 MASRLLLNNGAKMPILGLGTWKSPPGQVTEAVKVAIDVGYRHIDCAHVYQNENEVGVAIQ 60
Query: 61 EKLREQVVKREELFIVSKLWCTYHEKGLVKGACQKTLSDLKLDYLDLYLIHWPTGFKPGK 120
EKLREQVVKREELFIVSKLWCTYHEKGLVKGACQKTLSDLKLDYLDLYLIHWPTGFKPGK
Sbjct: 61 EKLREQVVKREELFIVSKLWCTYHEKGLVKGACQKTLSDLKLDYLDLYLIHWPTGFKPGK 120
Query: 121 EFFPLDESGNVVPSDTNILDTWAAMEELVDEGLVKAIGISNFNHLQVEMILNKPGLKYKP 180
EFFPLDESGNVVPSDTNILDTWAAMEELVDEGLVKAIGISNFNHLQVEMILNKPGLKYKP
Sbjct: 121 EFFPLDESGNVVPSDTNILDTWAAMEELVDEGLVKAIGISNFNHLQVEMILNKPGLKYKP 180
Query: 181 AVNQIECHPYLTQEKLIQYCQSKGIVVTAYSPLGSPDRPWAKPEDPSLLEDPRIKAIAAK 240
AVNQIECHPYLTQEKLIQYCQSKGIVVTAYSPLGSPDRPWAKPEDPSLLEDPRIKAIAAK
Sbjct: 181 AVNQIECHPYLTQEKLIQYCQSKGIVVTAYSPLGSPDRPWAKPEDPSLLEDPRIKAIAAK 240
Query: 241 HNKTTAQVLIRFPMQRNLVVIPKSVTPERIAENFKVFDFELSSQDMTTLLSYNRNWRVCA 300
HNKTTAQVLIRFPMQRNLVVIPKSVTPERIAENFKVFDFELSSQDMTTLLSYNRNWRVCA
Sbjct: 241 HNKTTAQVLIRFPMQRNLVVIPKSVTPERIAENFKVFDFELSSQDMTTLLSYNRNWRVCA 300
Query: 301 LLSCTSHKDYPFHEEF 316
LLSCTSHKDYPFHEEF
Sbjct: 301 LLSCTSHKDYPFHEEF 316
>gi|223468663 aldo-keto reductase family 1, member B10 [Homo
sapiens]
Length = 316
Score = 475 bits (1222), Expect = e-134
Identities = 223/316 (70%), Positives = 263/316 (83%)
Query: 1 MASRLLLNNGAKMPILGLGTWKSPPGQVTEAVKVAIDVGYRHIDCAHVYQNENEVGVAIQ 60
MA+ + L+ AKMPI+GLGTWKSP G+V EAVKVAID GYRHIDCA+VYQNE+EVG AIQ
Sbjct: 1 MATFVELSTKAKMPIVGLGTWKSPLGKVKEAVKVAIDAGYRHIDCAYVYQNEHEVGEAIQ 60
Query: 61 EKLREQVVKREELFIVSKLWCTYHEKGLVKGACQKTLSDLKLDYLDLYLIHWPTGFKPGK 120
EK++E+ VKRE+LFIVSKLW T+ E+ LV+ A +KTL DLKL YLD+YLIHWP GFK G
Sbjct: 61 EKIQEKAVKREDLFIVSKLWPTFFERPLVRKAFEKTLKDLKLSYLDVYLIHWPQGFKSGD 120
Query: 121 EFFPLDESGNVVPSDTNILDTWAAMEELVDEGLVKAIGISNFNHLQVEMILNKPGLKYKP 180
+ FP D+ GN + LD W AMEELVDEGLVKA+G+SNF+H Q+E +LNKPGLKYKP
Sbjct: 121 DLFPKDDKGNAIGGKATFLDAWEAMEELVDEGLVKALGVSNFSHFQIEKLLNKPGLKYKP 180
Query: 181 AVNQIECHPYLTQEKLIQYCQSKGIVVTAYSPLGSPDRPWAKPEDPSLLEDPRIKAIAAK 240
NQ+ECHPYLTQEKLIQYC SKGI VTAYSPLGSPDRPWAKPEDPSLLEDP+IK IAAK
Sbjct: 181 VTNQVECHPYLTQEKLIQYCHSKGITVTAYSPLGSPDRPWAKPEDPSLLEDPKIKEIAAK 240
Query: 241 HNKTTAQVLIRFPMQRNLVVIPKSVTPERIAENFKVFDFELSSQDMTTLLSYNRNWRVCA 300
H KT AQVLIRF +QRN++VIPKSVTP RI EN +VFDF+LS ++M T+LS+NRNWR C
Sbjct: 241 HKKTAAQVLIRFHIQRNVIVIPKSVTPARIVENIQVFDFKLSDEEMATILSFNRNWRACN 300
Query: 301 LLSCTSHKDYPFHEEF 316
+L + +DYPF+ E+
Sbjct: 301 VLQSSHLEDYPFNAEY 316
>gi|122937516 aldo-keto reductase family 1, member B10-like [Homo
sapiens]
Length = 316
Score = 451 bits (1161), Expect = e-127
Identities = 213/316 (67%), Positives = 256/316 (81%)
Query: 1 MASRLLLNNGAKMPILGLGTWKSPPGQVTEAVKVAIDVGYRHIDCAHVYQNENEVGVAIQ 60
MA+ + L+ AKMPI+GLGTW+S G+V EAVKVAID YRHIDCA+ Y+N++EVG AIQ
Sbjct: 1 MATFVELSTKAKMPIVGLGTWRSLLGKVKEAVKVAIDAEYRHIDCAYFYENQHEVGEAIQ 60
Query: 61 EKLREQVVKREELFIVSKLWCTYHEKGLVKGACQKTLSDLKLDYLDLYLIHWPTGFKPGK 120
EK++E+ V RE+LFIVSK+W T+ E+ LV+ A +KTL DLKL YLD+YLIHWP GFK G
Sbjct: 61 EKIQEKAVMREDLFIVSKVWPTFFERPLVRKAFEKTLKDLKLSYLDVYLIHWPQGFKTGD 120
Query: 121 EFFPLDESGNVVPSDTNILDTWAAMEELVDEGLVKAIGISNFNHLQVEMILNKPGLKYKP 180
+FFP D+ GN++ LD W AMEELVDEGLVKA+G+SNFNH Q+E +LNKPGLKYKP
Sbjct: 121 DFFPKDDKGNMISGKGTFLDAWEAMEELVDEGLVKALGVSNFNHFQIERLLNKPGLKYKP 180
Query: 181 AVNQIECHPYLTQEKLIQYCQSKGIVVTAYSPLGSPDRPWAKPEDPSLLEDPRIKAIAAK 240
NQ+ECHPYLTQEKLIQYC SKGI VTAYSPLGSPDRPWAKPEDPSLLEDP+IK IAAK
Sbjct: 181 VTNQVECHPYLTQEKLIQYCHSKGITVTAYSPLGSPDRPWAKPEDPSLLEDPKIKEIAAK 240
Query: 241 HNKTTAQVLIRFPMQRNLVVIPKSVTPERIAENFKVFDFELSSQDMTTLLSYNRNWRVCA 300
H KTTAQVLIRF +QRN+ VIPKS+TP I EN +VFDF+LS ++M T+LS+NRNWR
Sbjct: 241 HKKTTAQVLIRFHIQRNVTVIPKSMTPAHIVENIQVFDFKLSDEEMATILSFNRNWRAFD 300
Query: 301 LLSCTSHKDYPFHEEF 316
+ +D+PF E+
Sbjct: 301 FKEFSHLEDFPFDAEY 316
>gi|93277124 aldo-keto reductase family 1, member C-like 2 [Homo
sapiens]
Length = 320
Score = 367 bits (941), Expect = e-101
Identities = 180/323 (55%), Positives = 226/323 (69%), Gaps = 25/323 (7%)
Query: 13 MPILGLGTWKSPPGQVTEAVKVAIDVGYRHIDCAHVYQNENEVGVAIQEKLREQVVKREE 72
+P +GL +WK+ PG+VTEAVK AID GYRH DCA+ Y NE EVG I+ K++E V+RE+
Sbjct: 4 IPAVGLSSWKASPGKVTEAVKEAIDAGYRHFDCAYFYHNEREVGAGIRCKIKEGAVRRED 63
Query: 73 LFIVSKLWCTYHEKGLVKGACQKTLSDLKLDYLDLYLIHWPTGFKPGK------------ 120
LFI +KLWCT H+K LV+ AC+K+L LKL+YLDLYLIHWP GFKP
Sbjct: 64 LFIATKLWCTCHKKSLVETACRKSLKALKLNYLDLYLIHWPMGFKPPHPEWIMSCSELSF 123
Query: 121 -------EFFPLDESGNVVPSDTNILDTWAAMEELVDEGLVKAIGISNFNHLQVEMILNK 173
+ PLDES V+PSDT+ LDTW AME+LV GLVK IG+SNFNH Q+E +LNK
Sbjct: 124 CLSHPRVQDLPLDESNMVIPSDTDFLDTWEAMEDLVITGLVKNIGVSNFNHEQLERLLNK 183
Query: 174 PGLKYKPAVNQIECHPYLTQEKLIQYCQSKGIVVTAYSPLGSPDRPWAKPEDPSLLEDPR 233
PGL++KP NQIECHPYLTQ+ LI +CQS+ + VTAY PLG E L+++P
Sbjct: 184 PGLRFKPLTNQIECHPYLTQKNLISFCQSRDVSVTAYRPLG------GSCEGVDLIDNPV 237
Query: 234 IKAIAAKHNKTTAQVLIRFPMQRNLVVIPKSVTPERIAENFKVFDFELSSQDMTTLLSYN 293
IK IA +H K+ AQ+LIRF +QRN++VIP S+TP I EN +VFDFEL+ DM +LS N
Sbjct: 238 IKRIAKEHGKSPAQILIRFQIQRNVIVIPGSITPSHIKENIQVFDFELTQHDMDNILSLN 297
Query: 294 RNWRVCALLSCTSHKDYPFHEEF 316
RN R+ +HKDYPFH E+
Sbjct: 298 RNLRLAMFPITKNHKDYPFHIEY 320
>gi|5174695 aldo-keto reductase family 1, member D1 [Homo sapiens]
Length = 326
Score = 332 bits (852), Expect = 2e-91
Identities = 159/318 (50%), Positives = 221/318 (69%), Gaps = 5/318 (1%)
Query: 4 RLLLNNGAKMPILGLGTWK----SPPGQVTEAVKVAIDVGYRHIDCAHVYQNENEVGVAI 59
R+ L++G +PI+GLGT+ +P G +VKVAID GYRHID A++YQNE+EVG AI
Sbjct: 9 RIPLSDGNSIPIIGLGTYSEPKSTPKGACATSVKVAIDTGYRHIDGAYIYQNEHEVGEAI 68
Query: 60 QEKLREQVVKREELFIVSKLWCTYHEKGLVKGACQKTLSDLKLDYLDLYLIHWPTGFKPG 119
+EK+ E V+RE++F KLW T H +V+ ++TL L+LDY+DLY+I P FKPG
Sbjct: 69 REKIAEGKVRREDIFYCGKLWATNHVPEMVRPTLERTLRVLQLDYVDLYIIEVPMAFKPG 128
Query: 120 KEFFPLDESGNVVPSDTNILDTWAAMEELVDEGLVKAIGISNFNHLQVEMILNKPGLKYK 179
E +P DE+G + +N+ TW AME D GLVK++G+SNFN Q+E+ILNKPGLK+K
Sbjct: 129 DEIYPRDENGKWLYHKSNLCATWEAMEACKDAGLVKSLGVSNFNRRQLELILNKPGLKHK 188
Query: 180 PAVNQIECHPYLTQEKLIQYCQSKGIVVTAYSPLGSPDRP-WAKPEDPSLLEDPRIKAIA 238
P NQ+ECHPY TQ KL+++CQ IV+TAYSPLG+ P W P LL+D + ++
Sbjct: 189 PVSNQVECHPYFTQPKLLKFCQQHDIVITAYSPLGTSRNPIWVNVSSPPLLKDALLNSLG 248
Query: 239 AKHNKTTAQVLIRFPMQRNLVVIPKSVTPERIAENFKVFDFELSSQDMTTLLSYNRNWRV 298
++NKT AQ+++RF +QR +VVIPKS ERI ENF++FDF L+ ++M + + N+N R
Sbjct: 249 KRYNKTAAQIVLRFNIQRGVVVIPKSFNLERIKENFQIFDFSLTEEEMKDIEALNKNVRF 308
Query: 299 CALLSCTSHKDYPFHEEF 316
LL H +YPFH+E+
Sbjct: 309 VELLMWRDHPEYPFHDEY 326
>gi|24497577 aldo-keto reductase family 1, member A1 [Homo sapiens]
Length = 325
Score = 325 bits (833), Expect = 3e-89
Identities = 161/325 (49%), Positives = 226/325 (69%), Gaps = 12/325 (3%)
Query: 2 ASRLLLNNGAKMPILGLGTWKSPPGQVTEAVKVAIDVGYRHIDCAHVYQNENEVGVAIQE 61
AS +LL+ G KMP++GLGTWKS PGQV AVK A+ VGYRHIDCA +Y NE E+G A++E
Sbjct: 3 ASCVLLHTGQKMPLIGLGTWKSEPGQVKAAVKYALSVGYRHIDCAAIYGNEPEIGEALKE 62
Query: 62 KLRE-QVVKREELFIVSKLWCTYHEKGLVKGACQKTLSDLKLDYLDLYLIHWPTGFKPGK 120
+ + V REELF+ SKLW T H V+ A +KTL+DL+L+YLDLYL+HWP F+ G
Sbjct: 63 DVGPGKAVPREELFVTSKLWNTKHHPEDVEPALRKTLADLQLEYLDLYLMHWPYAFERGD 122
Query: 121 EFFPLDESGNVVPSDTNILDTWAAMEELVDEGLVKAIGISNFNHLQVEMILNKPGLKYKP 180
FP + G + T+ +TW A+E LV +GLV+A+G+SNFN Q++ IL+ ++ P
Sbjct: 123 NPFPKNADGTICYDSTHYKETWKALEALVAKGLVQALGLSNFNSRQIDDILSVASVR--P 180
Query: 181 AVNQIECHPYLTQEKLIQYCQSKGIVVTAYSPLGSPDRPWAKPEDPSLLEDPRIKAIAAK 240
AV Q+ECHPYL Q +LI +CQ++G+ VTAYSPLGS DR W P++P LLE+P + A+A K
Sbjct: 181 AVLQVECHPYLAQNELIAHCQARGLEVTAYSPLGSSDRAWRDPDEPVLLEEPVVLALAEK 240
Query: 241 HNKTTAQVLIRFPMQRNLVVIPKSVTPERIAENFKVFDFELSSQDMTTLLSYNRNWR-VC 299
+ ++ AQ+L+R+ +QR ++ IPKS+TP RI +N KVFDF S ++M L + N+NWR +
Sbjct: 241 YGRSPAQILLRWQVQRKVICIPKSITPSRILQNIKVFDFTFSPEEMKQLNALNKNWRYIV 300
Query: 300 ALLSC--------TSHKDYPFHEEF 316
+L+ H YPF++ +
Sbjct: 301 PMLTVDGKRVPRDAGHPLYPFNDPY 325
>gi|5174391 aldo-keto reductase family 1, member A1 [Homo sapiens]
Length = 325
Score = 325 bits (833), Expect = 3e-89
Identities = 161/325 (49%), Positives = 226/325 (69%), Gaps = 12/325 (3%)
Query: 2 ASRLLLNNGAKMPILGLGTWKSPPGQVTEAVKVAIDVGYRHIDCAHVYQNENEVGVAIQE 61
AS +LL+ G KMP++GLGTWKS PGQV AVK A+ VGYRHIDCA +Y NE E+G A++E
Sbjct: 3 ASCVLLHTGQKMPLIGLGTWKSEPGQVKAAVKYALSVGYRHIDCAAIYGNEPEIGEALKE 62
Query: 62 KLRE-QVVKREELFIVSKLWCTYHEKGLVKGACQKTLSDLKLDYLDLYLIHWPTGFKPGK 120
+ + V REELF+ SKLW T H V+ A +KTL+DL+L+YLDLYL+HWP F+ G
Sbjct: 63 DVGPGKAVPREELFVTSKLWNTKHHPEDVEPALRKTLADLQLEYLDLYLMHWPYAFERGD 122
Query: 121 EFFPLDESGNVVPSDTNILDTWAAMEELVDEGLVKAIGISNFNHLQVEMILNKPGLKYKP 180
FP + G + T+ +TW A+E LV +GLV+A+G+SNFN Q++ IL+ ++ P
Sbjct: 123 NPFPKNADGTICYDSTHYKETWKALEALVAKGLVQALGLSNFNSRQIDDILSVASVR--P 180
Query: 181 AVNQIECHPYLTQEKLIQYCQSKGIVVTAYSPLGSPDRPWAKPEDPSLLEDPRIKAIAAK 240
AV Q+ECHPYL Q +LI +CQ++G+ VTAYSPLGS DR W P++P LLE+P + A+A K
Sbjct: 181 AVLQVECHPYLAQNELIAHCQARGLEVTAYSPLGSSDRAWRDPDEPVLLEEPVVLALAEK 240
Query: 241 HNKTTAQVLIRFPMQRNLVVIPKSVTPERIAENFKVFDFELSSQDMTTLLSYNRNWR-VC 299
+ ++ AQ+L+R+ +QR ++ IPKS+TP RI +N KVFDF S ++M L + N+NWR +
Sbjct: 241 YGRSPAQILLRWQVQRKVICIPKSITPSRILQNIKVFDFTFSPEEMKQLNALNKNWRYIV 300
Query: 300 ALLSC--------TSHKDYPFHEEF 316
+L+ H YPF++ +
Sbjct: 301 PMLTVDGKRVPRDAGHPLYPFNDPY 325
>gi|5453543 aldo-keto reductase family 1, member C1 [Homo sapiens]
Length = 323
Score = 322 bits (824), Expect = 4e-88
Identities = 153/314 (48%), Positives = 215/314 (68%), Gaps = 4/314 (1%)
Query: 7 LNNGAKMPILGLGTW---KSPPGQVTEAVKVAIDVGYRHIDCAHVYQNENEVGVAIQEKL 63
LN+G MP+LG GT+ + P + EA K+AI+ G+RHID AH+Y NE +VG+AI+ K+
Sbjct: 10 LNDGHFMPVLGFGTYAPAEVPKSKALEATKLAIEAGFRHIDSAHLYNNEEQVGLAIRSKI 69
Query: 64 REQVVKREELFIVSKLWCTYHEKGLVKGACQKTLSDLKLDYLDLYLIHWPTGFKPGKEFF 123
+ VKRE++F SKLWC H LV+ A +++L +L+LDY+DLYLIH+P KPG+E
Sbjct: 70 ADGSVKREDIFYTSKLWCNSHRPELVRPALERSLKNLQLDYVDLYLIHFPVSVKPGEEVI 129
Query: 124 PLDESGNVVPSDTNILDTWAAMEELVDEGLVKAIGISNFNHLQVEMILNKPGLKYKPAVN 183
P DE+G ++ ++ TW A+E+ D GL K+IG+SNFN Q+EMILNKPGLKYKP N
Sbjct: 130 PKDENGKILFDTVDLCATWEAVEKCKDAGLAKSIGVSNFNRRQLEMILNKPGLKYKPVCN 189
Query: 184 QIECHPYLTQEKLIQYCQSKGIVVTAYSPLGS-PDRPWAKPEDPSLLEDPRIKAIAAKHN 242
Q+ECHPY Q KL+ +C+SK IV+ AYS LGS + PW P P LLEDP + A+A KH
Sbjct: 190 QVECHPYFNQRKLLDFCKSKDIVLVAYSALGSHREEPWVDPNSPVLLEDPVLCALAKKHK 249
Query: 243 KTTAQVLIRFPMQRNLVVIPKSVTPERIAENFKVFDFELSSQDMTTLLSYNRNWRVCALL 302
+T A + +R+ +QR +VV+ KS +RI +N +VF+F+L+S++M + NRN R L
Sbjct: 250 RTPALIALRYQLQRGVVVLAKSYNEQRIRQNVQVFEFQLTSEEMKAIDGLNRNVRYLTLD 309
Query: 303 SCTSHKDYPFHEEF 316
+YPF +E+
Sbjct: 310 IFAGPPNYPFSDEY 323
>gi|45446745 aldo-keto reductase family 1, member C2 [Homo sapiens]
Length = 323
Score = 320 bits (821), Expect = 8e-88
Identities = 154/314 (49%), Positives = 214/314 (68%), Gaps = 4/314 (1%)
Query: 7 LNNGAKMPILGLGTW---KSPPGQVTEAVKVAIDVGYRHIDCAHVYQNENEVGVAIQEKL 63
LN+G MP+LG GT+ + P + EAVK+AI+ G+ HID AHVY NE +VG+AI+ K+
Sbjct: 10 LNDGHFMPVLGFGTYAPAEVPKSKALEAVKLAIEAGFHHIDSAHVYNNEEQVGLAIRSKI 69
Query: 64 REQVVKREELFIVSKLWCTYHEKGLVKGACQKTLSDLKLDYLDLYLIHWPTGFKPGKEFF 123
+ VKRE++F SKLW H LV+ A +++L +L+LDY+DLYLIH+P KPG+E
Sbjct: 70 ADGSVKREDIFYTSKLWSNSHRPELVRPALERSLKNLQLDYVDLYLIHFPVSVKPGEEVI 129
Query: 124 PLDESGNVVPSDTNILDTWAAMEELVDEGLVKAIGISNFNHLQVEMILNKPGLKYKPAVN 183
P DE+G ++ ++ TW AME+ D GL K+IG+SNFNH +EMILNKPGLKYKP N
Sbjct: 130 PKDENGKILFDTVDLCATWEAMEKCKDAGLAKSIGVSNFNHRLLEMILNKPGLKYKPVCN 189
Query: 184 QIECHPYLTQEKLIQYCQSKGIVVTAYSPLGS-PDRPWAKPEDPSLLEDPRIKAIAAKHN 242
Q+ECHPY Q KL+ +C+SK IV+ AYS LGS + PW P P LLEDP + A+A KH
Sbjct: 190 QVECHPYFNQRKLLDFCKSKDIVLVAYSALGSHREEPWVDPNSPVLLEDPVLCALAKKHK 249
Query: 243 KTTAQVLIRFPMQRNLVVIPKSVTPERIAENFKVFDFELSSQDMTTLLSYNRNWRVCALL 302
+T A + +R+ +QR +VV+ KS +RI +N +VF+F+L+S++M + NRN R L
Sbjct: 250 RTPALIALRYQLQRGVVVLAKSYNEQRIRQNVQVFEFQLTSEEMKAIDGLNRNVRYLTLD 309
Query: 303 SCTSHKDYPFHEEF 316
+YPF +E+
Sbjct: 310 IFAGPPNYPFSDEY 323
>gi|4503285 aldo-keto reductase family 1, member C2 [Homo sapiens]
Length = 323
Score = 320 bits (821), Expect = 8e-88
Identities = 154/314 (49%), Positives = 214/314 (68%), Gaps = 4/314 (1%)
Query: 7 LNNGAKMPILGLGTW---KSPPGQVTEAVKVAIDVGYRHIDCAHVYQNENEVGVAIQEKL 63
LN+G MP+LG GT+ + P + EAVK+AI+ G+ HID AHVY NE +VG+AI+ K+
Sbjct: 10 LNDGHFMPVLGFGTYAPAEVPKSKALEAVKLAIEAGFHHIDSAHVYNNEEQVGLAIRSKI 69
Query: 64 REQVVKREELFIVSKLWCTYHEKGLVKGACQKTLSDLKLDYLDLYLIHWPTGFKPGKEFF 123
+ VKRE++F SKLW H LV+ A +++L +L+LDY+DLYLIH+P KPG+E
Sbjct: 70 ADGSVKREDIFYTSKLWSNSHRPELVRPALERSLKNLQLDYVDLYLIHFPVSVKPGEEVI 129
Query: 124 PLDESGNVVPSDTNILDTWAAMEELVDEGLVKAIGISNFNHLQVEMILNKPGLKYKPAVN 183
P DE+G ++ ++ TW AME+ D GL K+IG+SNFNH +EMILNKPGLKYKP N
Sbjct: 130 PKDENGKILFDTVDLCATWEAMEKCKDAGLAKSIGVSNFNHRLLEMILNKPGLKYKPVCN 189
Query: 184 QIECHPYLTQEKLIQYCQSKGIVVTAYSPLGS-PDRPWAKPEDPSLLEDPRIKAIAAKHN 242
Q+ECHPY Q KL+ +C+SK IV+ AYS LGS + PW P P LLEDP + A+A KH
Sbjct: 190 QVECHPYFNQRKLLDFCKSKDIVLVAYSALGSHREEPWVDPNSPVLLEDPVLCALAKKHK 249
Query: 243 KTTAQVLIRFPMQRNLVVIPKSVTPERIAENFKVFDFELSSQDMTTLLSYNRNWRVCALL 302
+T A + +R+ +QR +VV+ KS +RI +N +VF+F+L+S++M + NRN R L
Sbjct: 250 RTPALIALRYQLQRGVVVLAKSYNEQRIRQNVQVFEFQLTSEEMKAIDGLNRNVRYLTLD 309
Query: 303 SCTSHKDYPFHEEF 316
+YPF +E+
Sbjct: 310 IFAGPPNYPFSDEY 323
>gi|24497585 aldo-keto reductase family 1, member C4 [Homo sapiens]
Length = 323
Score = 318 bits (814), Expect = 5e-87
Identities = 152/317 (47%), Positives = 215/317 (67%), Gaps = 4/317 (1%)
Query: 4 RLLLNNGAKMPILGLGTWKSPP---GQVTEAVKVAIDVGYRHIDCAHVYQNENEVGVAIQ 60
R+ LN+G MP+LG GT+ P + E K+AI+ G+RHID A++Y NE +VG+AI+
Sbjct: 7 RVELNDGHFMPVLGFGTYAPPEVPRNRAVEVTKLAIEAGFRHIDSAYLYNNEEQVGLAIR 66
Query: 61 EKLREQVVKREELFIVSKLWCTYHEKGLVKGACQKTLSDLKLDYLDLYLIHWPTGFKPGK 120
K+ + VKRE++F SKLWCT+ + +V+ A + +L L+LDY+DLYL+H+P KPG+
Sbjct: 67 SKIADGSVKREDIFYTSKLWCTFFQPQMVQPALESSLKKLQLDYVDLYLLHFPMALKPGE 126
Query: 121 EFFPLDESGNVVPSDTNILDTWAAMEELVDEGLVKAIGISNFNHLQVEMILNKPGLKYKP 180
P DE+G V+ ++ TW ME+ D GL K+IG+SNFN Q+EMILNKPGLKYKP
Sbjct: 127 TPLPKDENGKVIFDTVDLSATWEVMEKCKDAGLAKSIGVSNFNCRQLEMILNKPGLKYKP 186
Query: 181 AVNQIECHPYLTQEKLIQYCQSKGIVVTAYSPLGSP-DRPWAKPEDPSLLEDPRIKAIAA 239
NQ+ECHPYL Q KL+ +C+SK IV+ A+S LG+ + W P P LLEDP + A+A
Sbjct: 187 VCNQVECHPYLNQSKLLDFCKSKDIVLVAHSALGTQRHKLWVDPNSPVLLEDPVLCALAK 246
Query: 240 KHNKTTAQVLIRFPMQRNLVVIPKSVTPERIAENFKVFDFELSSQDMTTLLSYNRNWRVC 299
KH +T A + +R+ +QR +VV+ KS +RI EN +VF+F+L+S+DM L NRN+R
Sbjct: 247 KHKQTPALIALRYQLQRGVVVLAKSYNEQRIRENIQVFEFQLTSEDMKVLDGLNRNYRYV 306
Query: 300 ALLSCTSHKDYPFHEEF 316
+ H DYPF +E+
Sbjct: 307 VMDFLMDHPDYPFSDEY 323
>gi|24497583 aldo-keto reductase family 1, member C3 [Homo sapiens]
Length = 323
Score = 315 bits (806), Expect = 4e-86
Identities = 151/314 (48%), Positives = 211/314 (67%), Gaps = 4/314 (1%)
Query: 7 LNNGAKMPILGLGTWKSPP---GQVTEAVKVAIDVGYRHIDCAHVYQNENEVGVAIQEKL 63
LN+G MP+LG GT+ P + E K+AI+ G+RHID AH+Y NE +VG+AI+ K+
Sbjct: 10 LNDGHFMPVLGFGTYAPPEVPRSKALEVTKLAIEAGFRHIDSAHLYNNEEQVGLAIRSKI 69
Query: 64 REQVVKREELFIVSKLWCTYHEKGLVKGACQKTLSDLKLDYLDLYLIHWPTGFKPGKEFF 123
+ VKRE++F SKLW T+H LV+ A + +L +LDY+DLYLIH P KPG+E
Sbjct: 70 ADGSVKREDIFYTSKLWSTFHRPELVRPALENSLKKAQLDYVDLYLIHSPMSLKPGEELS 129
Query: 124 PLDESGNVVPSDTNILDTWAAMEELVDEGLVKAIGISNFNHLQVEMILNKPGLKYKPAVN 183
P DE+G V+ ++ TW AME+ D GL K+IG+SNFN Q+EMILNKPGLKYKP N
Sbjct: 130 PTDENGKVIFDIVDLCTTWEAMEKCKDAGLAKSIGVSNFNRRQLEMILNKPGLKYKPVCN 189
Query: 184 QIECHPYLTQEKLIQYCQSKGIVVTAYSPLGSP-DRPWAKPEDPSLLEDPRIKAIAAKHN 242
Q+ECHPY + KL+ +C+SK IV+ AYS LGS D+ W P P LLEDP + A+A KH
Sbjct: 190 QVECHPYFNRSKLLDFCKSKDIVLVAYSALGSQRDKRWVDPNSPVLLEDPVLCALAKKHK 249
Query: 243 KTTAQVLIRFPMQRNLVVIPKSVTPERIAENFKVFDFELSSQDMTTLLSYNRNWRVCALL 302
+T A + +R+ +QR +VV+ KS +RI +N +VF+F+L+++DM + +RN
Sbjct: 250 RTPALIALRYQLQRGVVVLAKSYNEQRIRQNVQVFEFQLTAEDMKAIDGLDRNLHYFNSD 309
Query: 303 SCTSHKDYPFHEEF 316
S SH +YP+ +E+
Sbjct: 310 SFASHPNYPYSDEY 323
>gi|207028673 hypothetical protein LOC100134257 [Homo sapiens]
Length = 139
Score = 119 bits (299), Expect = 3e-27
Identities = 57/114 (50%), Positives = 80/114 (70%), Gaps = 3/114 (2%)
Query: 7 LNNGAKMPILGLGTW---KSPPGQVTEAVKVAIDVGYRHIDCAHVYQNENEVGVAIQEKL 63
LN+G MP+LG GT+ + P + EAVK+AI+ G+ HID AHVY NE +VG+AI+ K+
Sbjct: 10 LNDGHFMPVLGFGTYAPAEVPKSKALEAVKLAIEAGFHHIDSAHVYNNEEQVGLAIRSKI 69
Query: 64 REQVVKREELFIVSKLWCTYHEKGLVKGACQKTLSDLKLDYLDLYLIHWPTGFK 117
+ VKRE++F SKLW H LV+ A +++L +L+LDY+DLYLIH+P K
Sbjct: 70 ADGSVKREDIFYTSKLWSNSHRPELVRPALERSLKNLQLDYVDLYLIHFPVSVK 123
>gi|27436962 potassium voltage-gated channel, shaker-related
subfamily, beta member 1 isoform 2 [Homo sapiens]
Length = 408
Score = 45.1 bits (105), Expect = 8e-05
Identities = 53/234 (22%), Positives = 100/234 (42%), Gaps = 45/234 (19%)
Query: 1 MASRLLLNNGAKMPILGLGTWKSPPGQVTEAV-----KVAIDVGYRHIDCAHVYQNENEV 55
MA R L +G ++ LGLGTW + GQ+++ V +A + G D A VY +
Sbjct: 78 MAYRNLGKSGLRVSCLGLGTWVTFGGQISDEVAERLMTIAYESGVNLFDTAEVYA-AGKA 136
Query: 56 GVAIQEKLREQVVKREELFIVSKLWC---TYHEKGL--------VKGACQKTLSDLKLDY 104
V + ++++ +R L I +KL+ E+GL +KG+ Q+ L+L+Y
Sbjct: 137 EVILGSIIKKKGWRRSSLVITTKLYWGGKAETERGLSRKHIIEGLKGSLQR----LQLEY 192
Query: 105 LDLYLIHWPTGFKPGKEFFPLDESGNVVPSDTNILDTWAAMEELVDEGLVKAIGISNFNH 164
+D+ + P P +E AM ++++G+ G S ++
Sbjct: 193 VDVVFANRPDSNTPMEEIV-------------------RAMTHVINQGMAMYWGTSRWSA 233
Query: 165 LQV--EMILNKPGLKYKPAVNQIECHPYLTQE---KLIQYCQSKGIVVTAYSPL 213
+++ + + P Q E H + ++ +L + G+ +SPL
Sbjct: 234 MEIMEAYSVARQFNMIPPVCEQAEYHLFQREKVEVQLPELYHKIGVGAMTWSPL 287
>gi|27436966 potassium voltage-gated channel, shaker-related
subfamily, beta member 1 isoform 1 [Homo sapiens]
Length = 419
Score = 43.5 bits (101), Expect = 2e-04
Identities = 52/234 (22%), Positives = 99/234 (42%), Gaps = 45/234 (19%)
Query: 1 MASRLLLNNGAKMPILGLGTWKSPPGQVTEAV-----KVAIDVGYRHIDCAHVYQNENEV 55
M R L +G ++ LGLGTW + GQ+++ V +A + G D A VY +
Sbjct: 89 MPHRNLGKSGLRVSCLGLGTWVTFGGQISDEVAERLMTIAYESGVNLFDTAEVYA-AGKA 147
Query: 56 GVAIQEKLREQVVKREELFIVSKLWC---TYHEKGL--------VKGACQKTLSDLKLDY 104
V + ++++ +R L I +KL+ E+GL +KG+ Q+ L+L+Y
Sbjct: 148 EVILGSIIKKKGWRRSSLVITTKLYWGGKAETERGLSRKHIIEGLKGSLQR----LQLEY 203
Query: 105 LDLYLIHWPTGFKPGKEFFPLDESGNVVPSDTNILDTWAAMEELVDEGLVKAIGISNFNH 164
+D+ + P P +E AM ++++G+ G S ++
Sbjct: 204 VDVVFANRPDSNTPMEEIV-------------------RAMTHVINQGMAMYWGTSRWSA 244
Query: 165 LQV--EMILNKPGLKYKPAVNQIECHPYLTQE---KLIQYCQSKGIVVTAYSPL 213
+++ + + P Q E H + ++ +L + G+ +SPL
Sbjct: 245 MEIMEAYSVARQFNMIPPVCEQAEYHLFQREKVEVQLPELYHKIGVGAMTWSPL 298
>gi|27436969 potassium voltage-gated channel, shaker-related
subfamily, beta member 2 isoform 2 [Homo sapiens]
Length = 353
Score = 43.5 bits (101), Expect = 2e-04
Identities = 42/179 (23%), Positives = 80/179 (44%), Gaps = 32/179 (17%)
Query: 1 MASRLLLNNGAKMPILGLGTWKSPPGQVT-----EAVKVAIDVGYRHIDCAHVYQNENEV 55
M R L +G ++ LGLGTW + GQ+T + + +A D G D A VY +
Sbjct: 23 MIYRNLGKSGLRVSCLGLGTWVTFGGQITDEMAEQLMTLAYDNGINLFDTAEVYA-AGKA 81
Query: 56 GVAIQEKLREQVVKREELFIVSKLWC---TYHEKGL----VKGACQKTLSDLKLDYLDLY 108
V + ++++ +R L I +K++ E+GL + + +L L+L+Y+D+
Sbjct: 82 EVVLGNIIKKKGWRRSSLVITTKIFWGGKAETERGLSRKHIIEGLKASLERLQLEYVDVV 141
Query: 109 LIHWPTGFKPGKEFFPLDESGNVVPSDTNILDTWAAMEELVDEGLVKAIGISNFNHLQV 167
+ P P +E T AM ++++G+ G S ++ +++
Sbjct: 142 FANRPDPNTPMEE-------------------TVRAMTHVINQGMAMYWGTSRWSSMEI 181
>gi|27436964 potassium voltage-gated channel, shaker-related
subfamily, beta member 1 isoform 3 [Homo sapiens]
Length = 401
Score = 43.1 bits (100), Expect = 3e-04
Identities = 52/234 (22%), Positives = 99/234 (42%), Gaps = 45/234 (19%)
Query: 1 MASRLLLNNGAKMPILGLGTWKSPPGQVTEAV-----KVAIDVGYRHIDCAHVYQNENEV 55
M R L +G ++ LGLGTW + GQ+++ V +A + G D A VY +
Sbjct: 71 MKYRNLGKSGLRVSCLGLGTWVTFGGQISDEVAERLMTIAYESGVNLFDTAEVYA-AGKA 129
Query: 56 GVAIQEKLREQVVKREELFIVSKLWC---TYHEKGL--------VKGACQKTLSDLKLDY 104
V + ++++ +R L I +KL+ E+GL +KG+ Q+ L+L+Y
Sbjct: 130 EVILGSIIKKKGWRRSSLVITTKLYWGGKAETERGLSRKHIIEGLKGSLQR----LQLEY 185
Query: 105 LDLYLIHWPTGFKPGKEFFPLDESGNVVPSDTNILDTWAAMEELVDEGLVKAIGISNFNH 164
+D+ + P P +E AM ++++G+ G S ++
Sbjct: 186 VDVVFANRPDSNTPMEEIV-------------------RAMTHVINQGMAMYWGTSRWSA 226
Query: 165 LQV--EMILNKPGLKYKPAVNQIECHPYLTQE---KLIQYCQSKGIVVTAYSPL 213
+++ + + P Q E H + ++ +L + G+ +SPL
Sbjct: 227 MEIMEAYSVARQFNMIPPVCEQAEYHLFQREKVEVQLPELYHKIGVGAMTWSPL 280
>gi|4504825 potassium voltage-gated channel, shaker-related
subfamily, beta member 2 isoform 1 [Homo sapiens]
Length = 367
Score = 42.7 bits (99), Expect = 4e-04
Identities = 41/176 (23%), Positives = 79/176 (44%), Gaps = 32/176 (18%)
Query: 4 RLLLNNGAKMPILGLGTWKSPPGQVT-----EAVKVAIDVGYRHIDCAHVYQNENEVGVA 58
R L +G ++ LGLGTW + GQ+T + + +A D G D A VY + V
Sbjct: 40 RNLGKSGLRVSCLGLGTWVTFGGQITDEMAEQLMTLAYDNGINLFDTAEVYA-AGKAEVV 98
Query: 59 IQEKLREQVVKREELFIVSKLWC---TYHEKGL----VKGACQKTLSDLKLDYLDLYLIH 111
+ ++++ +R L I +K++ E+GL + + +L L+L+Y+D+ +
Sbjct: 99 LGNIIKKKGWRRSSLVITTKIFWGGKAETERGLSRKHIIEGLKASLERLQLEYVDVVFAN 158
Query: 112 WPTGFKPGKEFFPLDESGNVVPSDTNILDTWAAMEELVDEGLVKAIGISNFNHLQV 167
P P +E T AM ++++G+ G S ++ +++
Sbjct: 159 RPDPNTPMEE-------------------TVRAMTHVINQGMAMYWGTSRWSSMEI 195
>gi|56549117 dynamin 1 isoform 2 [Homo sapiens]
Length = 851
Score = 31.6 bits (70), Expect = 0.96
Identities = 21/89 (23%), Positives = 43/89 (48%), Gaps = 10/89 (11%)
Query: 26 GQVTEAVKVAIDVGYRHIDCAHVYQNENEVGVAIQEKLREQVVKR------EELFIVSKL 79
G+ E V + ID+ +++ H E+ +G A ++ Q+ K+ +E+ ++ K
Sbjct: 469 GRTKEQVMLLIDIELAYMNTNH----EDFIGFANAQQRSNQMNKKKTSGNQDEILVIRKG 524
Query: 80 WCTYHEKGLVKGACQKTLSDLKLDYLDLY 108
W T + G++KG ++ L + L Y
Sbjct: 525 WLTINNIGIMKGGSKEYWFVLTAENLSWY 553
>gi|59853099 dynamin 1 isoform 1 [Homo sapiens]
Length = 864
Score = 31.6 bits (70), Expect = 0.96
Identities = 21/89 (23%), Positives = 43/89 (48%), Gaps = 10/89 (11%)
Query: 26 GQVTEAVKVAIDVGYRHIDCAHVYQNENEVGVAIQEKLREQVVKR------EELFIVSKL 79
G+ E V + ID+ +++ H E+ +G A ++ Q+ K+ +E+ ++ K
Sbjct: 469 GRTKEQVMLLIDIELAYMNTNH----EDFIGFANAQQRSNQMNKKKTSGNQDEILVIRKG 524
Query: 80 WCTYHEKGLVKGACQKTLSDLKLDYLDLY 108
W T + G++KG ++ L + L Y
Sbjct: 525 WLTINNIGIMKGGSKEYWFVLTAENLSWY 553
>gi|149944410 hypothetical protein LOC57587 [Homo sapiens]
Length = 532
Score = 31.6 bits (70), Expect = 0.96
Identities = 19/65 (29%), Positives = 27/65 (41%)
Query: 171 LNKPGLKYKPAVNQIECHPYLTQEKLIQYCQSKGIVVTAYSPLGSPDRPWAKPEDPSLLE 230
L P KYK + E P T K Y + VT SPL +PD + + +
Sbjct: 216 LLSPKHKYKSGIKSTETQPSSTTPKCGHYPEESEDTVTDVSPLSTPDISPLQSFELGIAN 275
Query: 231 DPRIK 235
D ++K
Sbjct: 276 DQKVK 280
>gi|27436971 potassium voltage-gated channel, shaker-related
subfamily, beta member 3 [Homo sapiens]
Length = 404
Score = 30.8 bits (68), Expect = 1.6
Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 13/119 (10%)
Query: 1 MASRLLLNNGAKMPILGLGTWKSPPGQVT-EAVKVAIDVGYRH----IDCAHVYQNENEV 55
M R L +G ++ LGLGTW + Q++ E + + V Y H D A VY +
Sbjct: 78 MKYRNLGKSGLRVSCLGLGTWVTFGSQISDETAEDVLTVAYEHGVNLFDTAEVYA-AGKA 136
Query: 56 GVAIQEKLREQVVKREELFIVSKLWC---TYHEKGL----VKGACQKTLSDLKLDYLDL 107
+ L+ + +R I +K++ E+GL + + +L L+L Y+D+
Sbjct: 137 ERTLGNILKSKGWRRSSYVITTKIFWGGQAETERGLSRKHIIEGLRGSLERLQLGYVDI 195
>gi|219842266 usherin isoform B [Homo sapiens]
Length = 5202
Score = 30.4 bits (67), Expect = 2.1
Identities = 40/172 (23%), Positives = 71/172 (41%), Gaps = 26/172 (15%)
Query: 126 DESGNVVPSDTNILDTWAAMEELVDEGLVKAIG-ISNFN-HLQVEMILNKPGLKYKPAVN 183
D+ G VVP +LD + M + + K+ G I+++N +L + L PG V
Sbjct: 2531 DKPGPVVPPI--LLDVKSRMMLVTWQHPRKSNGVITHYNIYLHGRLYLRTPGNVTNCTVM 2588
Query: 184 QIECHPYLTQEKLIQYCQSKGIVVTAYSPLGSPDRPWAKPEDPSLLEDPRIKAIAAKHNK 243
+ HPY + ++ C SKG ++ S W P P + P + +
Sbjct: 2589 HL--HPYTAYKFQVEACTSKGCSLSPES-----QTVWTLPGAPEGIPSPEL------FSD 2635
Query: 244 TTAQVLIRFPMQRNLVVIPKSVTPERIAENFKVFDFELSSQDMTTLLSYNRN 295
T V+I + + P + ENF + +++TTL++ R+
Sbjct: 2636 TPTSVIISWQPPTH---------PNGLVENFTIERRVKGKEEVTTLVTLPRS 2678
>gi|4504011 glutamate-cysteine ligase regulatory protein [Homo
sapiens]
Length = 274
Score = 30.0 bits (66), Expect = 2.8
Identities = 29/118 (24%), Positives = 52/118 (44%), Gaps = 15/118 (12%)
Query: 69 KREELFIVSKLWCTY-HEKGLVKGACQKTLSDLKLDYLDLYLIHWPTGFKPGKEFFPLDE 127
+REE+ + +KL+ + + A S L + LD +I P P+++
Sbjct: 85 EREEMKVSAKLFIVESNSSSSTRSAVDMACSVLGVAQLDSVIIASP----------PIED 134
Query: 128 SGNVVPSDTNILDTWAAMEELVDEGLVKAIGISNFNHLQVEMILNKPGLKYKPAVNQI 185
N+ S ++ W +E LV + AIG S+ + Q+E + + KP NQ+
Sbjct: 135 GVNL--SLEHLQPYWEELENLVQSKKIVAIGTSDLDKTQLEQLYQ--WAQVKPNSNQV 188
>gi|156938336 class II transactivator [Homo sapiens]
Length = 1130
Score = 29.3 bits (64), Expect = 4.8
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 10 GAKMPILGLGTWKSPPGQVTEAVKVAIDVGYRH 42
G + +LG SPPG + E K+A ++G RH
Sbjct: 639 GLYVGLLGRAALDSPPGALAELAKLAWELGRRH 671
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.136 0.416
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,708,857
Number of Sequences: 37866
Number of extensions: 554623
Number of successful extensions: 1269
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 1234
Number of HSP's gapped (non-prelim): 25
length of query: 316
length of database: 18,247,518
effective HSP length: 102
effective length of query: 214
effective length of database: 14,385,186
effective search space: 3078429804
effective search space used: 3078429804
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.