Search of human proteins with 40807482

Search of human proteins with 40807482

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|40807482 LPLUNC1 protein precursor [Homo sapiens]
         (484 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|40807482 LPLUNC1 protein precursor [Homo sapiens]                  927   0.0  
gi|7706119 palate, lung and nasal epithelium associated precurso...    75   2e-13
gi|18765705 palate, lung and nasal epithelium associated precurs...    75   2e-13
gi|223278377 antimicrobial peptide RY2G5 [Homo sapiens]                74   2e-13
gi|45592961 chromosome 20 open reading frame 70 [Homo sapiens]         58   2e-08
gi|28372551 bactericidal/permeability-increasing protein-like 2 ...    57   4e-08
gi|32964823 antimicrobial peptide RYA3 [Homo sapiens]                  50   6e-06
gi|31652249 lipopolysaccharide-binding protein precursor [Homo s...    47   3e-05
gi|157276599 bactericidal/permeability-increasing protein precur...    47   5e-05
gi|122937388 MAX gene associated [Homo sapiens]                        31   2.2  

>gi|40807482 LPLUNC1 protein precursor [Homo sapiens]
          Length = 484

 Score =  927 bits (2397), Expect = 0.0
 Identities = 484/484 (100%), Positives = 484/484 (100%)

Query: 1   MAGPWTFTLLCGLLAATLIQATLSPTAVLILGPKVIKEKLTQELKDHNATSILQQLPLLS 60
           MAGPWTFTLLCGLLAATLIQATLSPTAVLILGPKVIKEKLTQELKDHNATSILQQLPLLS
Sbjct: 1   MAGPWTFTLLCGLLAATLIQATLSPTAVLILGPKVIKEKLTQELKDHNATSILQQLPLLS 60

Query: 61  AMREKPAGGIPVLGSLVNTVLKHIIWLKVITANILQLQVKPSANDQELLVKIPLDMVAGF 120
           AMREKPAGGIPVLGSLVNTVLKHIIWLKVITANILQLQVKPSANDQELLVKIPLDMVAGF
Sbjct: 61  AMREKPAGGIPVLGSLVNTVLKHIIWLKVITANILQLQVKPSANDQELLVKIPLDMVAGF 120

Query: 121 NTPLVKTIVEFHMTTEAQATIRMDTSASGPTRLVLSDCATSHGSLRIQLLHKLSFLVNAL 180
           NTPLVKTIVEFHMTTEAQATIRMDTSASGPTRLVLSDCATSHGSLRIQLLHKLSFLVNAL
Sbjct: 121 NTPLVKTIVEFHMTTEAQATIRMDTSASGPTRLVLSDCATSHGSLRIQLLHKLSFLVNAL 180

Query: 181 AKQVMNLLVPSLPNLVKNQLCPVIEASFNGMYADLLQLVKVPISLSIDRLEFDLLYPAIK 240
           AKQVMNLLVPSLPNLVKNQLCPVIEASFNGMYADLLQLVKVPISLSIDRLEFDLLYPAIK
Sbjct: 181 AKQVMNLLVPSLPNLVKNQLCPVIEASFNGMYADLLQLVKVPISLSIDRLEFDLLYPAIK 240

Query: 241 GDTIQLYLGAKLLDSQGKVTKWFNNSAASLTMPTLDNIPFSLIVSQDVVKAAVAAVLSPE 300
           GDTIQLYLGAKLLDSQGKVTKWFNNSAASLTMPTLDNIPFSLIVSQDVVKAAVAAVLSPE
Sbjct: 241 GDTIQLYLGAKLLDSQGKVTKWFNNSAASLTMPTLDNIPFSLIVSQDVVKAAVAAVLSPE 300

Query: 301 EFMVLLDSVLPESAHRLKSSIGLINEKAADKLGSTQIVKILTQDTPEFFIDQGHAKVAQL 360
           EFMVLLDSVLPESAHRLKSSIGLINEKAADKLGSTQIVKILTQDTPEFFIDQGHAKVAQL
Sbjct: 301 EFMVLLDSVLPESAHRLKSSIGLINEKAADKLGSTQIVKILTQDTPEFFIDQGHAKVAQL 360

Query: 361 IVLEVFPSSEALRPLFTLGIEASSEAQFYTKGDQLILNLNNISSDRIQLMNSGIGWFQPD 420
           IVLEVFPSSEALRPLFTLGIEASSEAQFYTKGDQLILNLNNISSDRIQLMNSGIGWFQPD
Sbjct: 361 IVLEVFPSSEALRPLFTLGIEASSEAQFYTKGDQLILNLNNISSDRIQLMNSGIGWFQPD 420

Query: 421 VLKNIITEIIHSILLPNQNGKLRSGVPVSLVKALGFEAAESSLTKDALVLTPASLWKPSS 480
           VLKNIITEIIHSILLPNQNGKLRSGVPVSLVKALGFEAAESSLTKDALVLTPASLWKPSS
Sbjct: 421 VLKNIITEIIHSILLPNQNGKLRSGVPVSLVKALGFEAAESSLTKDALVLTPASLWKPSS 480

Query: 481 PVSQ 484
           PVSQ
Sbjct: 481 PVSQ 484


>gi|7706119 palate, lung and nasal epithelium associated precursor
           [Homo sapiens]
          Length = 256

 Score = 74.7 bits (182), Expect = 2e-13
 Identities = 75/246 (30%), Positives = 109/246 (44%), Gaps = 30/246 (12%)

Query: 12  GLLAATLIQ-----------ATLSPTAVLILGPKVIKEKLTQELKDH----NATSILQQL 56
           GLLA T+ Q             L+    L L P  +   LT  L +         IL+ L
Sbjct: 12  GLLAQTMAQFGGLPVPLDQTLPLNVNPALPLSPTGLAGSLTNALSNGLLSGGLLGILENL 71

Query: 57  PLLSAMREKPAGGIP--VLGSLVNTV------LKHIIWLKVITANILQLQVKPSANDQEL 108
           PLL  +  KP GG    +LG L+  V      L +II +KV    +L+L +  S +   L
Sbjct: 72  PLLDIL--KPGGGTSGGLLGGLLGKVTSVIPGLNNIIDIKVTDPQLLELGLVQSPDGHRL 129

Query: 109 LVKIPLDMVAGFNTPLV-KTIVEFHMTTEAQATIRMDTSASGPTRLVLSDCATSHGSLRI 167
            V IPL +    NTPLV  +++   +  +  A I           LVL DC  S GSL+I
Sbjct: 130 YVTIPLGIKLQVNTPLVGASLLRLAVKLDITAEILAVRDKQERIHLVLGDCTHSPGSLQI 189

Query: 168 QLLHKLSFL-VNALAKQVMNLLVPSLPNLVKNQLCPVIEASFNGMYADLLQLVKVPISLS 226
            LL  L  L +  L   +  +L   LP LV+  +CP++     G+    + LV   +++ 
Sbjct: 190 SLLDGLGPLPIQGLLDSLTGILNKVLPELVQGNVCPLVNEVLRGLD---ITLVHDIVNML 246

Query: 227 IDRLEF 232
           I  L+F
Sbjct: 247 IHGLQF 252


>gi|18765705 palate, lung and nasal epithelium associated precursor
           [Homo sapiens]
          Length = 256

 Score = 74.7 bits (182), Expect = 2e-13
 Identities = 75/246 (30%), Positives = 109/246 (44%), Gaps = 30/246 (12%)

Query: 12  GLLAATLIQ-----------ATLSPTAVLILGPKVIKEKLTQELKDH----NATSILQQL 56
           GLLA T+ Q             L+    L L P  +   LT  L +         IL+ L
Sbjct: 12  GLLAQTMAQFGGLPVPLDQTLPLNVNPALPLSPTGLAGSLTNALSNGLLSGGLLGILENL 71

Query: 57  PLLSAMREKPAGGIP--VLGSLVNTV------LKHIIWLKVITANILQLQVKPSANDQEL 108
           PLL  +  KP GG    +LG L+  V      L +II +KV    +L+L +  S +   L
Sbjct: 72  PLLDIL--KPGGGTSGGLLGGLLGKVTSVIPGLNNIIDIKVTDPQLLELGLVQSPDGHRL 129

Query: 109 LVKIPLDMVAGFNTPLV-KTIVEFHMTTEAQATIRMDTSASGPTRLVLSDCATSHGSLRI 167
            V IPL +    NTPLV  +++   +  +  A I           LVL DC  S GSL+I
Sbjct: 130 YVTIPLGIKLQVNTPLVGASLLRLAVKLDITAEILAVRDKQERIHLVLGDCTHSPGSLQI 189

Query: 168 QLLHKLSFL-VNALAKQVMNLLVPSLPNLVKNQLCPVIEASFNGMYADLLQLVKVPISLS 226
            LL  L  L +  L   +  +L   LP LV+  +CP++     G+    + LV   +++ 
Sbjct: 190 SLLDGLGPLPIQGLLDSLTGILNKVLPELVQGNVCPLVNEVLRGLD---ITLVHDIVNML 246

Query: 227 IDRLEF 232
           I  L+F
Sbjct: 247 IHGLQF 252


>gi|223278377 antimicrobial peptide RY2G5 [Homo sapiens]
          Length = 614

 Score = 74.3 bits (181), Expect = 2e-13
 Identities = 83/348 (23%), Positives = 157/348 (45%), Gaps = 25/348 (7%)

Query: 139 ATIRMDTSASGPTRLVLSDCATSHGSLRIQLLHKLSFLVNALAKQVMNLLVPSLPNLVKN 198
           A +R+    +G  RLV+  C T  G ++++LL  L  L N +   V  +L   LP+L   
Sbjct: 276 AKVRLTMDRTGYPRLVIERCDTLLGGIKVKLLRGL--LPNLVDNLVNRVLADVLPDL--- 330

Query: 199 QLCPVIEASFNGMYADLLQLVKVPISLSI---DRLEFDLLYPAIKGDTIQLYLGAKLLDS 255
            LCP+++    G+  D L LV   I L I    +  F  L P + G+ ++L L   + ++
Sbjct: 331 -LCPIVDVVL-GLVNDQLGLVDSLIPLGILGSVQYTFSSL-PLVTGEFLELDLNTLVGEA 387

Query: 256 QGKVTKWFNN--SAASLTMPTL----DNIPFSLIVSQDVVKAAVAAVLSPEEFMVL--LD 307
            G +  +     + +   MP L    DN    L +S + +  +V  +L  +  + L   +
Sbjct: 388 GGGLIDYPLGWPAVSPKPMPELPPMGDNTKSQLAMSANFL-GSVLTLLQKQHALDLDITN 446

Query: 308 SVLPESAHRLKSSIGLINEKAADKLGST--QIVKILTQDTPEFFIDQGHAKVAQLIVLEV 365
            +  E      +++G +  K   +   +   I++I   + P   + +  A V  L   EV
Sbjct: 447 GMFEELPPLTTATLGALIPKVFQQYPESCPLIIRIQVLNPPSVMLQKDKALVKVLATAEV 506

Query: 366 FPSS--EALRPLFTLGIEASSEAQFYTKGDQLILNLNNISSDRIQLMNSGIGWFQPDVLK 423
             S   +    +  + ++    A F T+GD+L+++   +    + L  S +G F   +++
Sbjct: 507 MVSQPKDLETTICLIDVDTEFLASFSTEGDKLMIDAK-LEKTSLNLRTSNVGNFDIGLME 565

Query: 424 NIITEIIHSILLPNQNGKLRSGVPVSLVKALGFEAAESSLTKDALVLT 471
            ++ +I     +P  N  L SGVP+  +  + F  A+  + +D LVL+
Sbjct: 566 VLVEKIFDLAFMPAMNAVLGSGVPLPKILNIDFSNADIDVLEDLLVLS 613


>gi|45592961 chromosome 20 open reading frame 70 [Homo sapiens]
          Length = 249

 Score = 57.8 bits (138), Expect = 2e-08
 Identities = 51/232 (21%), Positives = 99/232 (42%), Gaps = 18/232 (7%)

Query: 5   WTFTLLCGLLAAT-----------LIQATLSPTAVLILGPKVIKEKLTQELKDHNA-TSI 52
           W   LLCG+L  T           L         VL  G + +   L   L+       +
Sbjct: 5   WKLVLLCGVLTGTSESLLDNLGNDLSNVVDKLEPVLHEGLETVDNTLKGILEKLKVDLGV 64

Query: 53  LQQLPLLSAMREKPAGGIPVLGSLVNTVL---KHIIWLKVITANILQLQVKPSANDQELL 109
           LQ+       ++K      +L ++++ +L     I  LK+  + IL ++ +P  + + L 
Sbjct: 65  LQKSSAWQLAKQKAQEAEKLLNNVISKLLPTNTDIFGLKISNSLILDVKAEPIDDGKGLN 124

Query: 110 VKIPLDMVAGFNTPLVKTIVEFHMTTE--AQATIRMDTSASGPTRLVLSDCATSHGSLRI 167
           +  P+        P++  I+    + +     TI  D     P   VL +CA+   S+ +
Sbjct: 125 LSFPVTANVTVAGPIIGQIINLKASLDLLTAVTIETDPQTHQPV-AVLGECASDPTSISL 183

Query: 168 QLLHKLSFLVNALAKQVMNLLVPSLPNLVKNQLCPVIEASFNGMYADLLQLV 219
            LL K S ++N     V+N L  ++ +L++ ++CP+I    + +  +++Q V
Sbjct: 184 SLLDKHSQIINKFVNSVINTLKSTVSSLLQKEICPLIRIFIHSLDVNVIQQV 235


>gi|28372551 bactericidal/permeability-increasing protein-like 2
           [Homo sapiens]
          Length = 507

 Score = 57.0 bits (136), Expect = 4e-08
 Identities = 76/339 (22%), Positives = 144/339 (42%), Gaps = 15/339 (4%)

Query: 149 GPTRLVLSDCATSHGSLRIQLLHKLSFLVNALAKQVMNLLVPSLPNLVKNQLCPVIEASF 208
           G   L L DC        +    +LS L N+ A+ +     P L NL    LCP+I +  
Sbjct: 152 GHPTLKLQDCYAQLSHAHVSFSGELSVLYNSFAEPMEK---PILKNL-NEMLCPIIASEV 207

Query: 209 NGMYADLLQLVKVPISLSIDRLEFDLLY-PAIKGDTIQLYLGAKLLDSQGKVTKWFNNSA 267
             + A+L  L  +    +   L++ L+  P I  + + L L       +      F  S 
Sbjct: 208 KALNANLSTLEVLTKIDNYTLLDYSLISSPEITENYLDLNLKGVFYPLENLTDPPF--SP 265

Query: 268 ASLTMPTLDNIPFSLIVSQDVVKAAVAAVLSPEEFMVLLDSVLPESAHRLKSSIGLIN-- 325
               +P   N    + +++   K+A  A  +   F V L S    S H +++S GL N  
Sbjct: 266 VPFVLPERSNSMLYIGIAEYFFKSASFAHFTAGVFNVTL-STEEISNHFVQNSQGLGNVL 324

Query: 326 EKAADK--LGSTQIVKILTQDTPEFFIDQGH--AKVAQLIVLEVFPSSEALRPLFTLGIE 381
            + A+   L    +V+I+  + P   +  G+    +   I++   P +  +  + ++   
Sbjct: 325 SRIAEIYILSQPFMVRIMATEPPIINLQPGNFTLDIPASIMMLTQPKNSTVETIVSMDFV 384

Query: 382 ASSEAQFYTKGDQLILNLNNISSDRIQLMNSGIGWFQPDVLKNIITEIIHSILLPNQNGK 441
           AS+       G +L+ +L+ ++  R+ L  S     +    +NI++ I+H  +LP  N K
Sbjct: 385 ASTSVGLVILGQRLVCSLS-LNRFRLALPESNRSNIEVLRFENILSSILHFGVLPLANAK 443

Query: 442 LRSGVPVSLVKALGFEAAESSLTKDALVLTPASLWKPSS 480
           L+ G P+S      F  ++  + +  L+++    ++ SS
Sbjct: 444 LQQGFPLSNPHKFLFVNSDIEVLEGFLLISTDLKYETSS 482


>gi|32964823 antimicrobial peptide RYA3 [Homo sapiens]
          Length = 476

 Score = 49.7 bits (117), Expect = 6e-06
 Identities = 86/399 (21%), Positives = 158/399 (39%), Gaps = 57/399 (14%)

Query: 109 LVKIPLDMVAGFNTPL-VKTIVEFH----------MTTEAQATIR--MDTSASGPTRLVL 155
           L K+ L ++ GF   L + T V  H          +  E   T R  +  S+ G   L+L
Sbjct: 102 LPKVLLKLLPGFGVQLSLHTKVGMHCSGPLGGLLQLAAEVNVTSRVALAVSSRGTPILIL 161

Query: 156 SDCATSHGSLRIQLLHKLSFLVNALAKQVMNLLVPSLPNLVKNQLCPVIEASFNGMYADL 215
             C+T        LL  +S     L   +  ++   L  ++   LCPV++ S  G+  +L
Sbjct: 162 KRCST--------LLGHISLFSGLLPTPLFGVVEQMLFKVLPGLLCPVVD-SVLGVVNEL 212

Query: 216 LQLVKVPISL-SIDRLEFDLL-YPAIKGDTIQLYLGAKLLDSQGKVTKWFNNSAASLTMP 273
           L  V   +SL ++  +EF L   P I    I+L +   +    G +  +  + A +   P
Sbjct: 213 LGAVLGLVSLGALGSVEFSLATLPLISNQYIELDINPIVKSVAGDIIDFPKSRAPAKVPP 272

Query: 274 TLD------------NIPFSLIVSQDVVKAAVAAVLSPEEFMVL---LDSVLPESAHRLK 318
             D            N  F L+ +   +   +   L P +  +    L ++LPE+  +L 
Sbjct: 273 KKDHTSQVMVPLYLFNTTFGLLQTNGALDMDITPELVPSDVPLTTTDLAALLPEALGKLP 332

Query: 319 SSIGLINEKAADKLGSTQIVKILTQDTPEFFIDQGHAKV---AQLIVLEVFPSSEALRPL 375
                        L    ++ +  ++ P   +    A V   A + VL   P       L
Sbjct: 333 -------------LHQQLLLFLRVREAPTVTLHNKKALVSLPANIHVLFYVPKGTP-ESL 378

Query: 376 FTLGIEASSEAQFYTKGDQLILNLNNISSDRIQLMNSGIGWFQPDVLKNIITEIIHSILL 435
           F L    +  AQ      +L ++L+ +    +++ +S    F    L+  ++ ++ ++  
Sbjct: 379 FELNSVMTVRAQLAPSATKLHISLS-LERLSVKVASSFTHAFDGSRLEEWLSHVVGAVYA 437

Query: 436 PNQNGKLRSGVPVSLVKALGFEAAESSLTKDALVLTPAS 474
           P  N  L  G+P+  V  + F  +   + ++A+VLT AS
Sbjct: 438 PKLNVALDVGIPLPKVLNINFSNSVLEIVENAVVLTVAS 476


>gi|31652249 lipopolysaccharide-binding protein precursor [Homo
           sapiens]
          Length = 481

 Score = 47.4 bits (111), Expect = 3e-05
 Identities = 71/344 (20%), Positives = 140/344 (40%), Gaps = 31/344 (9%)

Query: 143 MDTSASGPTRLVLSDCATSHGSLRIQLLHKLSFLVNALAKQVMNLLVPSLPNLVKNQLCP 202
           + + +SG   +  S C++    + + +   L +L+N    Q+ +        ++++++C 
Sbjct: 144 LGSESSGRPTVTASSCSSDIADVEVDMSGDLGWLLNLFHNQIES----KFQKVLESRICE 199

Query: 203 VIEASFNGMYADLLQLVKVPISLSIDRLEFDLLYPAIKGDTIQLYLGAKLLDSQGKVTKW 262
           +I+ S +      LQ   +P++  ID    D+ Y  ++         A++L+   K   +
Sbjct: 200 MIQKSVSSDLQPYLQ--TLPVTTEIDSFA-DIDYSLVEAPRAT----AQMLEVMFKGEIF 252

Query: 263 FNNS-------AASLTMPTLDNIPFSLIVSQDVVKAAVAAVLSPEE----FMVLLDSVLP 311
             N        AA +++P   N      +S  V     A+++  EE    F +  D + P
Sbjct: 253 HRNHRSPVTLLAAVMSLPEEHNKMVYFAISDYVFN--TASLVYHEEGYLNFSITDDMIPP 310

Query: 312 ESAHRL--KSSIGLINEKAADKLGSTQIVKILTQDTPEFFIDQGHAKVAQLIVLEVF--- 366
           +S  RL  KS    +   A         ++      P      G+  V   + ++ F   
Sbjct: 311 DSNIRLTTKSFRPFVPRLARLYPNMNLELQGSVPSAPLLNFSPGNLSVDPYMEIDAFVLL 370

Query: 367 PSSEALRPLFTLGIEASSEAQFYTKGDQLILNLNNISSDRIQLMNSGIGWFQPDVLKNII 426
           PSS +  P+F L + A++ +   T     I         +++L  S +G F  ++L+ ++
Sbjct: 371 PSS-SKEPVFRLSV-ATNVSATLTFNTSKITGFLKPGKVKVELKESKVGLFNAELLEALL 428

Query: 427 TEIIHSILLPNQNGKLRSGVPVSLVKALGFEAAESSLTKDALVL 470
              I +   P  N KL  G P+ L+K +        + KD L L
Sbjct: 429 NYYILNTFYPKFNDKLAEGFPLPLLKRVQLYDLGLQIHKDFLFL 472


>gi|157276599 bactericidal/permeability-increasing protein precursor
           [Homo sapiens]
          Length = 487

 Score = 46.6 bits (109), Expect = 5e-05
 Identities = 68/317 (21%), Positives = 134/317 (42%), Gaps = 30/317 (9%)

Query: 148 SGPTRLVLSDCATSHGSLRIQLLH-KLSFLVNALAKQVMNLLVPSLPNLVKNQLCPVIEA 206
           SG   +  S C++   S+ + +   K+ +L+    K++ +    +L N + +Q+C  +  
Sbjct: 156 SGKPTITCSSCSSHINSVHVHISKSKVGWLIQLFHKKIES----ALRNKMNSQVCEKVTN 211

Query: 207 SFNGMYADLLQLVKVPISL-SIDRLEFDLLYP-AIKGDTIQLYLGAKLLDSQGKVTKWFN 264
           S +       Q + V   + S+  + + L+ P A   +T+ + +  +           F 
Sbjct: 212 SVSSELQPYFQTLPVMTKIDSVAGINYGLVAPPATTAETLDVQMKGEFYSENHHNPPPF- 270

Query: 265 NSAASLTMPTLDNIPFSLIVSQDVVKAA-----VAAVLSPEEFMVLLDSVLP-ESAHRLK 318
            +   +  P   +    L +S      A      A VL     M L D ++P ES  RL 
Sbjct: 271 -APPVMEFPAAHDRMVYLGLSDYFFNTAGLVYQEAGVLK----MTLRDDMIPKESKFRLT 325

Query: 319 SSI-GLINEKAADKLGSTQIVKILTQDTPEFFIDQGHA----KVAQLIVLEVFPSSEALR 373
           +   G    + A K  + +I   ++  TP     Q           +    V P+S +L 
Sbjct: 326 TKFFGTFLPEVAKKFPNMKIQIHVSASTPPHLSVQPTGLTFYPAVDVQAFAVLPNS-SLA 384

Query: 374 PLFTLGIEASSEAQFYTKGDQLILNLNNISSDRI--QLMNSGIGWFQPDVLKNIITEIIH 431
            LF +G+  +   +   + ++L+     +  DR+  +L +S IG F  ++L++I+  I+ 
Sbjct: 385 SLFLIGMHTTGSMEVSAESNRLV---GELKLDRLLLELKHSNIGPFPVELLQDIMNYIVP 441

Query: 432 SILLPNQNGKLRSGVPV 448
            ++LP  N KL+ G P+
Sbjct: 442 ILVLPRVNEKLQKGFPL 458


>gi|122937388 MAX gene associated [Homo sapiens]
          Length = 3114

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 55/227 (24%), Positives = 93/227 (40%), Gaps = 24/227 (10%)

Query: 233  DLLYPAIKGDTIQLYLGAKLLDSQGKVTKWFNNSAASLTMPTLDNIPFSLIVSQDVVKAA 292
            + L   I GD   +    K  +S+G+  K  ++S   L M  L +    + + + V  A 
Sbjct: 2790 EFLPKKISGDMRGIQYKWKESESRGERVKSKDSSFHKLKMKDLKDSSIEMELRK-VTSAI 2848

Query: 293  VAAVLSPEEFMVLLDSV--LPESAHRLKSSIGLINEKAAD-KLGSTQIVKILTQDTPEFF 349
              A L   E +  ++      E+   L + I  +N++  D  +G  ++   +  + P   
Sbjct: 2849 EEAALDSSELLTNMEDEDDTDETLTSLLNEIAFLNQQLNDDSVGLAELPSSMDTEFP--- 2905

Query: 350  IDQGHAKVAQLIVLEVFPSSEALRPLFTLGIEASSEAQFYTKGDQ---LILNL--NNISS 404
               G A+ A   + +V P S A   +  LG           + D    L+L+L  ++ S 
Sbjct: 2906 ---GDARRA--FISKVPPGSRATFQVEHLGTGLKELPDVQGESDSISPLLLHLEDDDFSE 2960

Query: 405  DRIQLMNSGIGWFQPDVLKNIITEIIHSILLPNQ----NGKLRSGVP 447
            +  QL        +PDVLK +I   I   LL N+     GK  SG+P
Sbjct: 2961 NEKQLAEPAS---EPDVLKIVIDSEIKDSLLSNKKAIDGGKNTSGLP 3004


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.134    0.375 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,821,256
Number of Sequences: 37866
Number of extensions: 616857
Number of successful extensions: 1433
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 1417
Number of HSP's gapped (non-prelim): 11
length of query: 484
length of database: 18,247,518
effective HSP length: 106
effective length of query: 378
effective length of database: 14,233,722
effective search space: 5380346916
effective search space used: 5380346916
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.