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Search of human proteins with 40805864
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|40805864 tumor protein D52-like 2 isoform a [Homo sapiens]
(229 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|40805864 tumor protein D52-like 2 isoform a [Homo sapiens] 447 e-126
gi|40805868 tumor protein D52-like 2 isoform c [Homo sapiens] 420 e-118
gi|40805866 tumor protein D52-like 2 isoform b [Homo sapiens] 395 e-110
gi|40805860 tumor protein D52-like 2 isoform e [Homo sapiens] 388 e-108
gi|40805870 tumor protein D52-like 2 isoform d [Homo sapiens] 367 e-102
gi|40805862 tumor protein D52-like 2 isoform f [Homo sapiens] 335 1e-92
gi|70608174 tumor protein D52 isoform 2 [Homo sapiens] 190 8e-49
gi|51173744 tumor protein D52-like 1 isoform 2 [Homo sapiens] 166 1e-41
gi|4507641 tumor protein D52-like 1 isoform 1 [Homo sapiens] 166 1e-41
gi|4827038 tumor protein D52 isoform 3 [Homo sapiens] 146 2e-35
gi|70608172 tumor protein D52 isoform 1 [Homo sapiens] 146 2e-35
gi|51173746 tumor protein D52-like 1 isoform 3 [Homo sapiens] 140 1e-33
gi|49574214 protein kinase NYD-SP25 isoform 1 [Homo sapiens] 127 1e-29
gi|51173748 tumor protein D52-like 1 isoform 4 [Homo sapiens] 123 1e-28
gi|49574216 protein kinase NYD-SP25 isoform 3 [Homo sapiens] 115 3e-26
gi|49574212 protein kinase NYD-SP25 isoform 2 [Homo sapiens] 115 3e-26
gi|239753310 PREDICTED: hypothetical protein XP_002345618 [Homo ... 38 0.008
gi|239741764 PREDICTED: hypothetical protein XP_002342289 [Homo ... 37 0.014
gi|205277396 dynactin 1 isoform 4 [Homo sapiens] 36 0.024
gi|205277392 dynactin 1 isoform 3 [Homo sapiens] 36 0.024
gi|13259508 dynactin 1 isoform 2 [Homo sapiens] 36 0.024
gi|13259510 dynactin 1 isoform 1 [Homo sapiens] 36 0.024
gi|62899065 centrosomal protein 72 kDa [Homo sapiens] 34 0.12
gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin ... 34 0.12
gi|55770878 neuronal pentraxin I precursor [Homo sapiens] 32 0.35
gi|58535453 CDK5 regulatory subunit associated protein 2 isoform... 32 0.45
gi|58535451 CDK5 regulatory subunit associated protein 2 isoform... 32 0.45
gi|21361405 regulator of G-protein signalling 17 [Homo sapiens] 32 0.45
gi|38045898 RAB6-interacting protein 2 isoform epsilon [Homo sap... 32 0.59
gi|38045896 RAB6-interacting protein 2 isoform delta [Homo sapiens] 32 0.59
>gi|40805864 tumor protein D52-like 2 isoform a [Homo sapiens]
Length = 229
Score = 447 bits (1151), Expect = e-126
Identities = 229/229 (100%), Positives = 229/229 (100%)
Query: 1 MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI 60
MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI
Sbjct: 1 MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI 60
Query: 61 VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKV 120
VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKV
Sbjct: 61 VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKV 120
Query: 121 TQSDLYKKTQETLSQAGQKTSAALSTVGSAISRKLGDMRAHPFSHSFSSYSIRHSISMPA 180
TQSDLYKKTQETLSQAGQKTSAALSTVGSAISRKLGDMRAHPFSHSFSSYSIRHSISMPA
Sbjct: 121 TQSDLYKKTQETLSQAGQKTSAALSTVGSAISRKLGDMRAHPFSHSFSSYSIRHSISMPA 180
Query: 181 MRNSATFKSFEDRVGTIKSKVVGDRENGSDNLPSSAGSGDKPLSDPAPF 229
MRNSATFKSFEDRVGTIKSKVVGDRENGSDNLPSSAGSGDKPLSDPAPF
Sbjct: 181 MRNSATFKSFEDRVGTIKSKVVGDRENGSDNLPSSAGSGDKPLSDPAPF 229
>gi|40805868 tumor protein D52-like 2 isoform c [Homo sapiens]
Length = 220
Score = 420 bits (1079), Expect = e-118
Identities = 220/229 (96%), Positives = 220/229 (96%), Gaps = 9/229 (3%)
Query: 1 MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI 60
MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI
Sbjct: 1 MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI 60
Query: 61 VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKV 120
VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKV
Sbjct: 61 VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKV 120
Query: 121 TQSDLYKKTQETLSQAGQKTSAALSTVGSAISRKLGDMRAHPFSHSFSSYSIRHSISMPA 180
TQSDLYKKTQETLSQAGQKTSAALSTVGSAISRKLGDM SSYSIRHSISMPA
Sbjct: 121 TQSDLYKKTQETLSQAGQKTSAALSTVGSAISRKLGDM---------SSYSIRHSISMPA 171
Query: 181 MRNSATFKSFEDRVGTIKSKVVGDRENGSDNLPSSAGSGDKPLSDPAPF 229
MRNSATFKSFEDRVGTIKSKVVGDRENGSDNLPSSAGSGDKPLSDPAPF
Sbjct: 172 MRNSATFKSFEDRVGTIKSKVVGDRENGSDNLPSSAGSGDKPLSDPAPF 220
>gi|40805866 tumor protein D52-like 2 isoform b [Homo sapiens]
Length = 209
Score = 395 bits (1015), Expect = e-110
Identities = 209/229 (91%), Positives = 209/229 (91%), Gaps = 20/229 (8%)
Query: 1 MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI 60
MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI
Sbjct: 1 MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI 60
Query: 61 VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKV 120
VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSA
Sbjct: 61 VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSA--------------- 105
Query: 121 TQSDLYKKTQETLSQAGQKTSAALSTVGSAISRKLGDMRAHPFSHSFSSYSIRHSISMPA 180
YKKTQETLSQAGQKTSAALSTVGSAISRKLGDMRAHPFSHSFSSYSIRHSISMPA
Sbjct: 106 -----YKKTQETLSQAGQKTSAALSTVGSAISRKLGDMRAHPFSHSFSSYSIRHSISMPA 160
Query: 181 MRNSATFKSFEDRVGTIKSKVVGDRENGSDNLPSSAGSGDKPLSDPAPF 229
MRNSATFKSFEDRVGTIKSKVVGDRENGSDNLPSSAGSGDKPLSDPAPF
Sbjct: 161 MRNSATFKSFEDRVGTIKSKVVGDRENGSDNLPSSAGSGDKPLSDPAPF 209
>gi|40805860 tumor protein D52-like 2 isoform e [Homo sapiens]
Length = 206
Score = 388 bits (996), Expect = e-108
Identities = 206/229 (89%), Positives = 206/229 (89%), Gaps = 23/229 (10%)
Query: 1 MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI 60
MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI
Sbjct: 1 MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI 60
Query: 61 VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKV 120
VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKV
Sbjct: 61 VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKV 120
Query: 121 TQSDLYKKTQETLSQAGQKTSAALSTVGSAISRKLGDMRAHPFSHSFSSYSIRHSISMPA 180
TQSDLYKKTQETLSQAGQKTSAALSTVGSAISRKLGD
Sbjct: 121 TQSDLYKKTQETLSQAGQKTSAALSTVGSAISRKLGD----------------------- 157
Query: 181 MRNSATFKSFEDRVGTIKSKVVGDRENGSDNLPSSAGSGDKPLSDPAPF 229
MRNSATFKSFEDRVGTIKSKVVGDRENGSDNLPSSAGSGDKPLSDPAPF
Sbjct: 158 MRNSATFKSFEDRVGTIKSKVVGDRENGSDNLPSSAGSGDKPLSDPAPF 206
>gi|40805870 tumor protein D52-like 2 isoform d [Homo sapiens]
Length = 200
Score = 367 bits (943), Expect = e-102
Identities = 200/229 (87%), Positives = 200/229 (87%), Gaps = 29/229 (12%)
Query: 1 MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI 60
MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI
Sbjct: 1 MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI 60
Query: 61 VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKV 120
VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSA
Sbjct: 61 VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSA--------------- 105
Query: 121 TQSDLYKKTQETLSQAGQKTSAALSTVGSAISRKLGDMRAHPFSHSFSSYSIRHSISMPA 180
YKKTQETLSQAGQKTSAALSTVGSAISRKLGDM SSYSIRHSISMPA
Sbjct: 106 -----YKKTQETLSQAGQKTSAALSTVGSAISRKLGDM---------SSYSIRHSISMPA 151
Query: 181 MRNSATFKSFEDRVGTIKSKVVGDRENGSDNLPSSAGSGDKPLSDPAPF 229
MRNSATFKSFEDRVGTIKSKVVGDRENGSDNLPSSAGSGDKPLSDPAPF
Sbjct: 152 MRNSATFKSFEDRVGTIKSKVVGDRENGSDNLPSSAGSGDKPLSDPAPF 200
>gi|40805862 tumor protein D52-like 2 isoform f [Homo sapiens]
Length = 186
Score = 335 bits (860), Expect = 1e-92
Identities = 186/229 (81%), Positives = 186/229 (81%), Gaps = 43/229 (18%)
Query: 1 MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI 60
MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI
Sbjct: 1 MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEI 60
Query: 61 VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKV 120
VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSA
Sbjct: 61 VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSA--------------- 105
Query: 121 TQSDLYKKTQETLSQAGQKTSAALSTVGSAISRKLGDMRAHPFSHSFSSYSIRHSISMPA 180
YKKTQETLSQAGQKTSAALSTVGSAISRKLGD
Sbjct: 106 -----YKKTQETLSQAGQKTSAALSTVGSAISRKLGD----------------------- 137
Query: 181 MRNSATFKSFEDRVGTIKSKVVGDRENGSDNLPSSAGSGDKPLSDPAPF 229
MRNSATFKSFEDRVGTIKSKVVGDRENGSDNLPSSAGSGDKPLSDPAPF
Sbjct: 138 MRNSATFKSFEDRVGTIKSKVVGDRENGSDNLPSSAGSGDKPLSDPAPF 186
>gi|70608174 tumor protein D52 isoform 2 [Homo sapiens]
Length = 207
Score = 190 bits (483), Expect = 8e-49
Identities = 107/200 (53%), Positives = 134/200 (67%), Gaps = 22/200 (11%)
Query: 31 VAARTPAVEGLTEAEEEELRAELTKVEEEIVTLRQVLAAKERHCGELKRRLGLSTLGELK 90
VAA A E L+E E+EELR EL KVEEEI TL QVLAAKE+H E+KR+LG+++L ELK
Sbjct: 21 VAATISATETLSEEEQEELRRELAKVEEEIQTLSQVLAAKEKHLAEIKRKLGINSLQELK 80
Query: 91 QNLSRSWHDVQVSSAYVKTSEKLGEWNEKVTQSDLYKKTQETLSQAGQKTSAALSTVGSA 150
QN+++ W DV +SAY KKT ETLSQAGQK SAA S+VGS
Sbjct: 81 QNIAKGWQDVTATSAY--------------------KKTSETLSQAGQKASAAFSSVGSV 120
Query: 151 ISRKLGDMRAHPFSHSFSSYSIRHSISMPAMRNSATFKSFEDRVGTIKSKVVGDRENGSD 210
I++KL D++ FSHSFS SI+HSISMPAMRNS TFKSFE++V +KSKV G + G D
Sbjct: 121 ITKKLEDVKLQAFSHSFSIRSIQHSISMPAMRNSPTFKSFEEKVENLKSKVGGTKPAGGD 180
Query: 211 --NLPSSAGSGDKPLSDPAP 228
+ +SA + ++P P
Sbjct: 181 FGEVLNSAANASATTTEPLP 200
>gi|51173744 tumor protein D52-like 1 isoform 2 [Homo sapiens]
Length = 175
Score = 166 bits (421), Expect = 1e-41
Identities = 94/172 (54%), Positives = 117/172 (68%), Gaps = 34/172 (19%)
Query: 41 LTEAEEEELRAELTKVEEEIVTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDV 100
L+E E+EEL+AEL ++E+EI TLRQVL+AKERH E+K++LG++ + ELKQN S+SWHD+
Sbjct: 2 LSEEEKEELKAELVQLEDEITTLRQVLSAKERHLVEIKQKLGMNLMNELKQNFSKSWHDM 61
Query: 101 QVSSAYVKTSEKLGEWNEKVTQSDLYKKTQETLSQAGQKTSAALSTVGSAISRKLGDMRA 160
Q ++A YKKT ETLS AGQK +AA S VG+AIS+K GDM
Sbjct: 62 QTTTA--------------------YKKTHETLSHAGQKATAAFSNVGTAISKKFGDM-- 99
Query: 161 HPFSHSFSSYSIRHSISMPAMRNSATFKSFEDRVGT----IKSKVVGDRENG 208
SYSIRHSISMPAMRNS TFKSFE+RV T +K+KV G NG
Sbjct: 100 --------SYSIRHSISMPAMRNSPTFKSFEERVETTVTSLKTKVGGTNPNG 143
>gi|4507641 tumor protein D52-like 1 isoform 1 [Homo sapiens]
Length = 204
Score = 166 bits (421), Expect = 1e-41
Identities = 94/172 (54%), Positives = 117/172 (68%), Gaps = 34/172 (19%)
Query: 41 LTEAEEEELRAELTKVEEEIVTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDV 100
L+E E+EEL+AEL ++E+EI TLRQVL+AKERH E+K++LG++ + ELKQN S+SWHD+
Sbjct: 31 LSEEEKEELKAELVQLEDEITTLRQVLSAKERHLVEIKQKLGMNLMNELKQNFSKSWHDM 90
Query: 101 QVSSAYVKTSEKLGEWNEKVTQSDLYKKTQETLSQAGQKTSAALSTVGSAISRKLGDMRA 160
Q ++A YKKT ETLS AGQK +AA S VG+AIS+K GDM
Sbjct: 91 QTTTA--------------------YKKTHETLSHAGQKATAAFSNVGTAISKKFGDM-- 128
Query: 161 HPFSHSFSSYSIRHSISMPAMRNSATFKSFEDRVGT----IKSKVVGDRENG 208
SYSIRHSISMPAMRNS TFKSFE+RV T +K+KV G NG
Sbjct: 129 --------SYSIRHSISMPAMRNSPTFKSFEERVETTVTSLKTKVGGTNPNG 172
>gi|4827038 tumor protein D52 isoform 3 [Homo sapiens]
Length = 184
Score = 146 bits (368), Expect = 2e-35
Identities = 90/200 (45%), Positives = 116/200 (58%), Gaps = 45/200 (22%)
Query: 31 VAARTPAVEGLTEAEEEELRAELTKVEEEIVTLRQVLAAKERHCGELKRRLGLSTLGELK 90
VAA A E L+E E+EELR EL KVEEEI TL QVLAAKE+H E+KR+LG+++L ELK
Sbjct: 21 VAATISATETLSEEEQEELRRELAKVEEEIQTLSQVLAAKEKHLAEIKRKLGINSLQELK 80
Query: 91 QNLSRSWHDVQVSSAYVKTSEKLGEWNEKVTQSDLYKKTQETLSQAGQKTSAALSTVGSA 150
QN+++ W DV +SAY KKT ETLSQAGQK SAA S+VGS
Sbjct: 81 QNIAKGWQDVTATSAY--------------------KKTSETLSQAGQKASAAFSSVGSV 120
Query: 151 ISRKLGDMRAHPFSHSFSSYSIRHSISMPAMRNSATFKSFEDRVGTIKSKVVGDRENGSD 210
I++KL D ++NS TFKSFE++V +KSKV G + G D
Sbjct: 121 ITKKLED-----------------------VKNSPTFKSFEEKVENLKSKVGGTKPAGGD 157
Query: 211 --NLPSSAGSGDKPLSDPAP 228
+ +SA + ++P P
Sbjct: 158 FGEVLNSAANASATTTEPLP 177
>gi|70608172 tumor protein D52 isoform 1 [Homo sapiens]
Length = 224
Score = 146 bits (368), Expect = 2e-35
Identities = 90/200 (45%), Positives = 116/200 (58%), Gaps = 45/200 (22%)
Query: 31 VAARTPAVEGLTEAEEEELRAELTKVEEEIVTLRQVLAAKERHCGELKRRLGLSTLGELK 90
VAA A E L+E E+EELR EL KVEEEI TL QVLAAKE+H E+KR+LG+++L ELK
Sbjct: 61 VAATISATETLSEEEQEELRRELAKVEEEIQTLSQVLAAKEKHLAEIKRKLGINSLQELK 120
Query: 91 QNLSRSWHDVQVSSAYVKTSEKLGEWNEKVTQSDLYKKTQETLSQAGQKTSAALSTVGSA 150
QN+++ W DV +SAY KKT ETLSQAGQK SAA S+VGS
Sbjct: 121 QNIAKGWQDVTATSAY--------------------KKTSETLSQAGQKASAAFSSVGSV 160
Query: 151 ISRKLGDMRAHPFSHSFSSYSIRHSISMPAMRNSATFKSFEDRVGTIKSKVVGDRENGSD 210
I++KL D ++NS TFKSFE++V +KSKV G + G D
Sbjct: 161 ITKKLED-----------------------VKNSPTFKSFEEKVENLKSKVGGTKPAGGD 197
Query: 211 --NLPSSAGSGDKPLSDPAP 228
+ +SA + ++P P
Sbjct: 198 FGEVLNSAANASATTTEPLP 217
>gi|51173746 tumor protein D52-like 1 isoform 3 [Homo sapiens]
Length = 144
Score = 140 bits (352), Expect = 1e-33
Identities = 77/142 (54%), Positives = 97/142 (68%), Gaps = 30/142 (21%)
Query: 41 LTEAEEEELRAELTKVEEEIVTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDV 100
L+E E+EEL+AEL ++E+EI TLRQVL+AKERH E+K++LG++ + ELKQN S+SWHD+
Sbjct: 31 LSEEEKEELKAELVQLEDEITTLRQVLSAKERHLVEIKQKLGMNLMNELKQNFSKSWHDM 90
Query: 101 QVSSAYVKTSEKLGEWNEKVTQSDLYKKTQETLSQAGQKTSAALSTVGSAISRKLGDMRA 160
Q ++A YKKT ETLS AGQK +AA S VG+AIS+K GDM
Sbjct: 91 QTTTA--------------------YKKTHETLSHAGQKATAAFSNVGTAISKKFGDM-- 128
Query: 161 HPFSHSFSSYSIRHSISMPAMR 182
SYSIRHSISMPAMR
Sbjct: 129 --------SYSIRHSISMPAMR 142
>gi|49574214 protein kinase NYD-SP25 isoform 1 [Homo sapiens]
Length = 140
Score = 127 bits (318), Expect = 1e-29
Identities = 82/183 (44%), Positives = 101/183 (55%), Gaps = 52/183 (28%)
Query: 23 TDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEIVTLRQVLAAKERHCGELKRRLG 82
T+ V T + T +E LTE E+ EL+ +LTK+E EIVTLR VLAAKER CGELKR+LG
Sbjct: 6 TETSVGTYESHSTSELEDLTEPEQRELKTKLTKLEAEIVTLRHVLAAKERRCGELKRKLG 65
Query: 83 LSTLGELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKVTQSDLYKKTQETLSQAGQKTSA 142
L+ L L+QNLS+SW DVQVS+ YVK QKTSA
Sbjct: 66 LTALVGLRQNLSKSWLDVQVSNTYVK-----------------------------QKTSA 96
Query: 143 ALSTVGSAISRKLGDMRAHPFSHSFSSYSIRHSISMPAMRNSATFKSFEDRVGTIKSKVV 202
ALST+G+ I RKLG ++ SAT +SFE +GTIKSKV
Sbjct: 97 ALSTMGTLICRKLG-----------------------GVKKSATLRSFEGLMGTIKSKVS 133
Query: 203 GDR 205
G +
Sbjct: 134 GGK 136
>gi|51173748 tumor protein D52-like 1 isoform 4 [Homo sapiens]
Length = 131
Score = 123 bits (308), Expect = 1e-28
Identities = 64/119 (53%), Positives = 84/119 (70%), Gaps = 20/119 (16%)
Query: 41 LTEAEEEELRAELTKVEEEIVTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDV 100
L+E E+EEL+AEL ++E+EI TLRQVL+AKERH E+K++LG++ + ELKQN S+SWHD+
Sbjct: 31 LSEEEKEELKAELVQLEDEITTLRQVLSAKERHLVEIKQKLGMNLMNELKQNFSKSWHDM 90
Query: 101 QVSSAYVKTSEKLGEWNEKVTQSDLYKKTQETLSQAGQKTSAALSTVGSAISRKLGDMR 159
Q ++A YKKT ETLS AGQK +AA S VG+AIS+K GDMR
Sbjct: 91 QTTTA--------------------YKKTHETLSHAGQKATAAFSNVGTAISKKFGDMR 129
>gi|49574216 protein kinase NYD-SP25 isoform 3 [Homo sapiens]
Length = 132
Score = 115 bits (288), Expect = 3e-26
Identities = 70/145 (48%), Positives = 86/145 (59%), Gaps = 29/145 (20%)
Query: 23 TDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEIVTLRQVLAAKERHCGELKRRLG 82
T+ V T + T +E LTE E+ EL+ +LTK+E EIVTLR VLAAKER CGELKR+LG
Sbjct: 6 TETSVGTYESHSTSELEDLTEPEQRELKTKLTKLEAEIVTLRHVLAAKERRCGELKRKLG 65
Query: 83 LSTLGELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKVTQSDLYKKTQETLSQAGQKTSA 142
L+ L L+QNLS+SW DVQVS+ YVK QKTSA
Sbjct: 66 LTALVGLRQNLSKSWLDVQVSNTYVK-----------------------------QKTSA 96
Query: 143 ALSTVGSAISRKLGDMRAHPFSHSF 167
ALST+G+ I RKLG ++ SF
Sbjct: 97 ALSTMGTLICRKLGGVKKSATLRSF 121
>gi|49574212 protein kinase NYD-SP25 isoform 2 [Homo sapiens]
Length = 136
Score = 115 bits (288), Expect = 3e-26
Identities = 70/145 (48%), Positives = 86/145 (59%), Gaps = 29/145 (20%)
Query: 23 TDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEIVTLRQVLAAKERHCGELKRRLG 82
T+ V T + T +E LTE E+ EL+ +LTK+E EIVTLR VLAAKER CGELKR+LG
Sbjct: 6 TETSVGTYESHSTSELEDLTEPEQRELKTKLTKLEAEIVTLRHVLAAKERRCGELKRKLG 65
Query: 83 LSTLGELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKVTQSDLYKKTQETLSQAGQKTSA 142
L+ L L+QNLS+SW DVQVS+ YVK QKTSA
Sbjct: 66 LTALVGLRQNLSKSWLDVQVSNTYVK-----------------------------QKTSA 96
Query: 143 ALSTVGSAISRKLGDMRAHPFSHSF 167
ALST+G+ I RKLG ++ SF
Sbjct: 97 ALSTMGTLICRKLGGVKKSATLRSF 121
>gi|239753310 PREDICTED: hypothetical protein XP_002345618 [Homo
sapiens]
Length = 415
Score = 37.7 bits (86), Expect = 0.008
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 162 PFSHSFSSYSIRHSISMPAMRNSAT---FKSFEDRVGTIKSKVVGDRENGSDNLPSSAGS 218
P SHS++S+ ++ P RNS F +F + VG + + GDRE G + P G+
Sbjct: 289 PLSHSWASWVFLVCLATPDARNSGDSWDFLAFLESVGRTEPEEAGDREKGPQSAPGGIGN 348
Query: 219 GDKP 222
P
Sbjct: 349 LGPP 352
>gi|239741764 PREDICTED: hypothetical protein XP_002342289 [Homo
sapiens]
Length = 433
Score = 37.0 bits (84), Expect = 0.014
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Query: 162 PFSHSFSSYSIRHSISMPAMRNSAT---FKSFEDRVGTIKSKVVGDRENGSDNLPSSAGS 218
P SHS++S+ ++ P RNS F +F + VG + + GDRE G P G+
Sbjct: 289 PLSHSWASWVFLVCLATPDARNSGDSWDFLAFLESVGRTEPEEAGDREKGPQGQPGPRGA 348
Query: 219 GDK 221
K
Sbjct: 349 TGK 351
>gi|205277396 dynactin 1 isoform 4 [Homo sapiens]
Length = 1139
Score = 36.2 bits (82), Expect = 0.024
Identities = 40/144 (27%), Positives = 61/144 (42%), Gaps = 39/144 (27%)
Query: 12 SPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEA-----------EEEELRAELTKVEEEI 60
S + G LS S P T +AA LT EEE LRA++ +EE++
Sbjct: 38 SASAGELSSSEPSTPAQTPLAAPIIPTPVLTSPGAVPPLPSPSKEEEGLRAQVRDLEEKL 97
Query: 61 VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKV 120
TLR LKR + L EL++ H +Q+ E++ EW K+
Sbjct: 98 ETLR------------LKRAEDKAKLKELEK------HKIQL--------EQVQEWKSKM 131
Query: 121 --TQSDLYKKTQETLSQAGQKTSA 142
Q+DL ++ +E +A + A
Sbjct: 132 QEQQADLQRRLKEARKEAKEALEA 155
>gi|205277392 dynactin 1 isoform 3 [Homo sapiens]
Length = 1253
Score = 36.2 bits (82), Expect = 0.024
Identities = 40/144 (27%), Positives = 61/144 (42%), Gaps = 39/144 (27%)
Query: 12 SPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEA-----------EEEELRAELTKVEEEI 60
S + G LS S P T +AA LT EEE LRA++ +EE++
Sbjct: 152 SASAGELSSSEPSTPAQTPLAAPIIPTPVLTSPGAVPPLPSPSKEEEGLRAQVRDLEEKL 211
Query: 61 VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKV 120
TLR LKR + L EL++ H +Q+ E++ EW K+
Sbjct: 212 ETLR------------LKRAEDKAKLKELEK------HKIQL--------EQVQEWKSKM 245
Query: 121 --TQSDLYKKTQETLSQAGQKTSA 142
Q+DL ++ +E +A + A
Sbjct: 246 QEQQADLQRRLKEARKEAKEALEA 269
>gi|13259508 dynactin 1 isoform 2 [Homo sapiens]
Length = 1144
Score = 36.2 bits (82), Expect = 0.024
Identities = 40/144 (27%), Positives = 61/144 (42%), Gaps = 39/144 (27%)
Query: 12 SPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEA-----------EEEELRAELTKVEEEI 60
S + G LS S P T +AA LT EEE LRA++ +EE++
Sbjct: 38 SASAGELSSSEPSTPAQTPLAAPIIPTPVLTSPGAVPPLPSPSKEEEGLRAQVRDLEEKL 97
Query: 61 VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKV 120
TLR LKR + L EL++ H +Q+ E++ EW K+
Sbjct: 98 ETLR------------LKRAEDKAKLKELEK------HKIQL--------EQVQEWKSKM 131
Query: 121 --TQSDLYKKTQETLSQAGQKTSA 142
Q+DL ++ +E +A + A
Sbjct: 132 QEQQADLQRRLKEARKEAKEALEA 155
>gi|13259510 dynactin 1 isoform 1 [Homo sapiens]
Length = 1278
Score = 36.2 bits (82), Expect = 0.024
Identities = 40/144 (27%), Positives = 61/144 (42%), Gaps = 39/144 (27%)
Query: 12 SPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEA-----------EEEELRAELTKVEEEI 60
S + G LS S P T +AA LT EEE LRA++ +EE++
Sbjct: 172 SASAGELSSSEPSTPAQTPLAAPIIPTPVLTSPGAVPPLPSPSKEEEGLRAQVRDLEEKL 231
Query: 61 VTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKV 120
TLR LKR + L EL++ H +Q+ E++ EW K+
Sbjct: 232 ETLR------------LKRAEDKAKLKELEK------HKIQL--------EQVQEWKSKM 265
Query: 121 --TQSDLYKKTQETLSQAGQKTSA 142
Q+DL ++ +E +A + A
Sbjct: 266 QEQQADLQRRLKEARKEAKEALEA 289
>gi|62899065 centrosomal protein 72 kDa [Homo sapiens]
Length = 647
Score = 33.9 bits (76), Expect = 0.12
Identities = 32/116 (27%), Positives = 53/116 (45%), Gaps = 2/116 (1%)
Query: 45 EEEELRAELTKVEEEIVTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSS 104
E E+ AEL +E+ LRQ L LK L LS E+K + + ++Q++
Sbjct: 498 EMSEVTAELHHTHKELDDLRQHLDKSLEENSRLKSLL-LSMKKEVKSADTAATLNLQIAG 556
Query: 105 AYVKTSEKLGEWNEKVTQSDLYKKTQETLSQAGQKTSAALSTVGSAISRKLGDMRA 160
GE E + Y K QE L+Q Q++ ++L + + ++L +RA
Sbjct: 557 LQTSVKRLCGEIVELKQHLEHYDKIQE-LTQMLQESHSSLVSTNEHLLQELSQVRA 611
>gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin (with
transmembrane signal), 1 [Homo sapiens]
Length = 3259
Score = 33.9 bits (76), Expect = 0.12
Identities = 32/112 (28%), Positives = 56/112 (50%), Gaps = 9/112 (8%)
Query: 29 TGVAARTPAVEGLTEAEE---EELRAELTKVEEEIVTLRQVLAAKERHCGELKRRLGLST 85
T +AA T ++ L + + +E + K + I + + + KE +C LK +L +
Sbjct: 2185 TQLAAFTKSMSSLQDDRDRVIDEAKKWERKFSDAIQSKEEEIRLKEDNCSVLKDQLRQMS 2244
Query: 86 LG--ELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKVTQSDLYKKTQETLSQ 135
+ ELK N+SR HD Q+ + +T +L +KV + L + +E LSQ
Sbjct: 2245 IHMEELKINISRLEHDKQIWESKAQTEVQL---QQKVCDT-LQGENKELLSQ 2292
>gi|55770878 neuronal pentraxin I precursor [Homo sapiens]
Length = 432
Score = 32.3 bits (72), Expect = 0.35
Identities = 33/117 (28%), Positives = 51/117 (43%), Gaps = 15/117 (12%)
Query: 23 TDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEIVTLRQVLAAKERHCGELKRRLG 82
T VPVD + A + A G EELR+ + ++ E ++ ++ + +++ EL +LG
Sbjct: 33 TSVPVDADMCAASVAAGGA-----EELRSSVLQLRETVLQQKETILSQKETIRELTAKLG 87
Query: 83 LSTLGELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKVTQSDLYK-KTQETLSQAGQ 138
S+S D A K + K T DL + ETLSQ GQ
Sbjct: 88 RCE--------SQSTLDPGAGEARAGGGRK-QPGSGKNTMGDLSRTPAAETLSQLGQ 135
>gi|58535453 CDK5 regulatory subunit associated protein 2 isoform b
[Homo sapiens]
Length = 1814
Score = 32.0 bits (71), Expect = 0.45
Identities = 37/149 (24%), Positives = 60/149 (40%), Gaps = 15/149 (10%)
Query: 32 AARTPAVEGLTEAEEEELRAELTKVEEEIVTLRQVLAAKERHCGELKRRLGLSTLGELKQ 91
AA E TEA + E + E EE I L + L KER E K
Sbjct: 264 AAPREEKERETEAAQMEHQKERNSFEERIQALEEDLREKEREIAT-----------EKKN 312
Query: 92 NLSRSWHDVQVSSAYVKTSEKLGEWNEKVTQ-SDLYKKTQETLSQAGQKTSAALSTVGSA 150
+L R ++ A +K+ E N ++ + S + K +E L +A + +A
Sbjct: 313 SLKRDKAIQGLTMALKSKEKKVEELNSEIEKLSAAFAKAREALQKAQTQEFQGSEDYETA 372
Query: 151 ISRK---LGDMRAHPFSHSFSSYSIRHSI 176
+S K +R+ + S ++ +R SI
Sbjct: 373 LSGKEALSAALRSQNLTKSTENHRLRRSI 401
>gi|58535451 CDK5 regulatory subunit associated protein 2 isoform a
[Homo sapiens]
Length = 1893
Score = 32.0 bits (71), Expect = 0.45
Identities = 37/149 (24%), Positives = 60/149 (40%), Gaps = 15/149 (10%)
Query: 32 AARTPAVEGLTEAEEEELRAELTKVEEEIVTLRQVLAAKERHCGELKRRLGLSTLGELKQ 91
AA E TEA + E + E EE I L + L KER E K
Sbjct: 264 AAPREEKERETEAAQMEHQKERNSFEERIQALEEDLREKEREIAT-----------EKKN 312
Query: 92 NLSRSWHDVQVSSAYVKTSEKLGEWNEKVTQ-SDLYKKTQETLSQAGQKTSAALSTVGSA 150
+L R ++ A +K+ E N ++ + S + K +E L +A + +A
Sbjct: 313 SLKRDKAIQGLTMALKSKEKKVEELNSEIEKLSAAFAKAREALQKAQTQEFQGSEDYETA 372
Query: 151 ISRK---LGDMRAHPFSHSFSSYSIRHSI 176
+S K +R+ + S ++ +R SI
Sbjct: 373 LSGKEALSAALRSQNLTKSTENHRLRRSI 401
>gi|21361405 regulator of G-protein signalling 17 [Homo sapiens]
Length = 210
Score = 32.0 bits (71), Expect = 0.45
Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Query: 115 EWNEKVTQSDLYKKTQETLSQAGQKTSAALSTVGSAISRKLGDMRAHPFSHS-FSSYSIR 173
E N+KV + ++ +S K + S V I+R L D H + + Y++
Sbjct: 123 EQNKKVIEEKARMIYEDYISILSPKEVSLDSRVREVINRNLLDPNPHMYEDAQLQIYTLM 182
Query: 174 HSISMPAMRNSATFKSF 190
H S P NS +KSF
Sbjct: 183 HRDSFPRFLNSQIYKSF 199
>gi|38045898 RAB6-interacting protein 2 isoform epsilon [Homo
sapiens]
Length = 1116
Score = 31.6 bits (70), Expect = 0.59
Identities = 25/117 (21%), Positives = 51/117 (43%), Gaps = 5/117 (4%)
Query: 28 DTGVAARTPAVEGLTEAEEEELRAELTKVEEEIVTLRQVLAAKERHCGELKRRLGLSTLG 87
D+ P V LTE + L AE + +E+ LR+ L EL+ TL
Sbjct: 249 DSSSRTGEPCVAELTEENFQRLHAEHERQAKELFLLRKTLEEM-----ELRIETQKQTLN 303
Query: 88 ELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKVTQSDLYKKTQETLSQAGQKTSAAL 144
+++ + +Q K +E+ E ++ +++++ E+L + +K ++ L
Sbjct: 304 ARDESIKKLLEMLQSKGLSAKATEEDHERTRRLAEAEMHVHHLESLLEQKEKENSML 360
>gi|38045896 RAB6-interacting protein 2 isoform delta [Homo sapiens]
Length = 1088
Score = 31.6 bits (70), Expect = 0.59
Identities = 25/117 (21%), Positives = 51/117 (43%), Gaps = 5/117 (4%)
Query: 28 DTGVAARTPAVEGLTEAEEEELRAELTKVEEEIVTLRQVLAAKERHCGELKRRLGLSTLG 87
D+ P V LTE + L AE + +E+ LR+ L EL+ TL
Sbjct: 249 DSSSRTGEPCVAELTEENFQRLHAEHERQAKELFLLRKTLEEM-----ELRIETQKQTLN 303
Query: 88 ELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKVTQSDLYKKTQETLSQAGQKTSAAL 144
+++ + +Q K +E+ E ++ +++++ E+L + +K ++ L
Sbjct: 304 ARDESIKKLLEMLQSKGLSAKATEEDHERTRRLAEAEMHVHHLESLLEQKEKENSML 360
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.308 0.124 0.337
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,952,181
Number of Sequences: 37866
Number of extensions: 319558
Number of successful extensions: 1656
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 102
Number of HSP's that attempted gapping in prelim test: 1549
Number of HSP's gapped (non-prelim): 191
length of query: 229
length of database: 18,247,518
effective HSP length: 99
effective length of query: 130
effective length of database: 14,498,784
effective search space: 1884841920
effective search space used: 1884841920
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.