USP4 27554

Name: USP4	Sequence: fasta or formatted (963aa)		NCBI GI: 40795665
Description: ubiquitin specific protease 4 isoform a		Referenced in: Ubiquitin and Related Protein Modifications
Other entries for this name: alt prot [916aa] ubiquitin specific protease 4 isoform b
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.6 54 2 C cysteine 2.7 26 1 D aspartate 6.1 59 2 E glutamate 7.4 71 3 F phenylalanine 3.7 36 1 G glycine 6.2 60 3 H histidine 2.4 23 1 I isoleucine 2.7 26 1 K lysine 6.1 59 4 L leucine 9.4 91 3 M methionine 2.3 22 1 N asparagine 4.5 43 1 P proline 5.4 52 2 Q glutamine 4.4 42 3 R arginine 4.7 45 2 S serine 9.2 89 3 T threonine 5.3 51 2 V valine 6.0 58 2 W tryptophan 1.6 15 1 Y tyrosine 4.3 41 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 ubiquitin specific protease 4 isoform a USP4 0.941 ubiquitin specific protease 4 isoform b USP15 0.547 ubiquitin specific peptidase 15 USP11 0.388 ubiquitin specific peptidase 11 USP19 0.191 ubiquitin thioesterase 19 USP32 0.128 ubiquitin specific protease 32 USP6 0.118 ubiquitin specific protease 6 USP8 0.084 ubiquitin specific peptidase 8 USP8 0.084 ubiquitin specific peptidase 8 USP8 0.084 ubiquitin specific peptidase 8 USP43 0.072 ubiquitin specific protease 43 USP31 0.071 ubiquitin specific peptidase 31 USP2 0.068 ubiquitin specific peptidase 2 isoform a USP2 0.068 ubiquitin specific peptidase 2 isoform b USP3 0.059 ubiquitin thiolesterase 3 USP21 0.052 ubiquitin-specific protease 21 USP21 0.052 ubiquitin-specific protease 21 USP45 0.052 ubiquitin specific peptidase 45 USP33 0.047 ubiquitin specific protease 33 isoform 3 USP33 0.047 ubiquitin specific protease 33 isoform 1 USP33 0.047 ubiquitin specific protease 33 isoform 2 USP20 0.044 ubiquitin specific protease 20 USP20 0.044 ubiquitin specific protease 20 USP20 0.044 ubiquitin specific protease 20 LOC100294407 0.038 PREDICTED: similar to hCG2039376 USP50 0.036 ubiquitin specific protease 50 USP16 0.033 ubiquitin specific protease 16 isoform b USP16 0.033 ubiquitin specific protease 16 isoform a USP16 0.033 ubiquitin specific protease 16 isoform a USP22 0.032 ubiquitin thiolesterase 22 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.