Guide to the Human Genome
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Name: DIXDC1 Sequence: fasta or formatted (472aa) NCBI GI: 39930479
Description:

DIX domain containing 1 isoform b

Not currently referenced in the text

Other entries for this name:
alt prot {683aa} DIX domain containing 1 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.7         22           2
 C cysteine            1.1          5           1
 D aspartate           6.1         29           3
 E glutamate          11.2         53           2
 F phenylalanine       1.9          9           1
 G glycine             5.1         24           2
 H histidine           3.4         16           2
 I isoleucine          3.8         18           3
 K lysine              7.2         34           2
 L leucine            11.7         55           3
 M methionine          1.9          9           1
 N asparagine          4.0         19           1
 P proline             4.4         21           2
 Q glutamine           7.2         34           2
 R arginine            5.9         28           1
 S serine              8.3         39           2
 T threonine           4.9         23           1
 V valine              4.4         21           1
 W tryptophan          1.1          5           1
 Y tyrosine            1.7          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   DIX domain containing 1 isoform b 
DIXDC1                0.980   DIX domain containing 1 isoform a 
DVL2                  0.057   dishevelled 2 
DVL1                  0.051   dishevelled 1 
DVL3                  0.051   dishevelled 3 
CCDC18                0.033   sarcoma antigen NY-SAR-41 
CENPE                 0.032   centromere protein E 
PPFIA1                0.032   PTPRF interacting protein alpha 1 isoform a 
PPFIA1                0.032   PTPRF interacting protein alpha 1 isoform b 
TMF1                  0.029   TATA element modulatory factor 1 
MYH11                 0.029   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
MYH11                 0.029   smooth muscle myosin heavy chain 11 isoform SM1B [Ho...
MYH11                 0.029   smooth muscle myosin heavy chain 11 isoform SM2B [Ho...
MYH11                 0.029   smooth muscle myosin heavy chain 11 isoform SM2A [Ho...
EEA1                  0.029   early endosome antigen 1, 162kD 
ERC2                  0.029   cytomatrix protein p110 
FAM184B               0.029   hypothetical protein LOC27146 
KIF7                  0.028   kinesin family member 7 
TCHH                  0.028   trichohyalin 
AXIN2                 0.027   axin 2 
MYH2                  0.027   myosin, heavy chain 2, skeletal muscle, adult [Homo...
MYH2                  0.027   myosin, heavy chain 2, skeletal muscle, adult [Homo...
CEP110                0.027   centrosomal protein 110kDa 
CEP250                0.026   centrosomal protein 2 
AKAP9                 0.026   A-kinase anchor protein 9 isoform 2 
AKAP9                 0.026   A-kinase anchor protein 9 isoform 3 
MYH1                  0.026   myosin, heavy chain 1, skeletal muscle, adult [Homo...
PLEC1                 0.026   plectin 1 isoform 11 
PLEC1                 0.026   plectin 1 isoform 10 
PLEC1                 0.026   plectin 1 isoform 8 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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