Search of human proteins with 38708309

Search of human proteins with 38708309

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|38708309 PPPDE peptidase domain containing 1 [Homo sapiens]
         (194 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|38708309 PPPDE peptidase domain containing 1 [Homo sapiens]        397   e-111
gi|239757398 PREDICTED: similar to CGI-146 protein [Homo sapiens]     231   4e-61
gi|239751890 PREDICTED: hypothetical protein XP_002348023 [Homo ...   227   4e-60
gi|239746380 PREDICTED: hypothetical protein XP_002343701 [Homo ...   227   4e-60
gi|63055040 PPPDE peptidase domain containing 2 [Homo sapiens]         57   8e-09
gi|4503811 fucosyltransferase 4 [Homo sapiens]                         31   0.58 
gi|32484979 adaptor-related protein complex 3, beta 1 subunit [H...    31   0.58 
gi|217272874 coiled-coil domain containing 37 [Homo sapiens]           30   0.99 
gi|62526031 neurochondrin isoform 2 [Homo sapiens]                     30   1.7  
gi|24307949 neurochondrin isoform 1 [Homo sapiens]                     30   1.7  
gi|62526029 neurochondrin isoform 1 [Homo sapiens]                     30   1.7  
gi|238859658 LIM and senescent cell antigen-like domains 2 isofo...    29   2.2  
gi|238776788 LIM and senescent cell antigen-like domains 2 isofo...    29   2.2  
gi|238776786 LIM and senescent cell antigen-like domains 2 isofo...    29   2.2  
gi|40804748 LIM and senescent cell antigen-like domains 2 isofor...    29   2.2  
gi|193083163 roundabout, axon guidance receptor, homolog 2 isofo...    29   2.2  
gi|61888896 roundabout, axon guidance receptor, homolog 2 isofor...    29   2.2  
gi|109134349 coatomer protein complex, subunit gamma 2 [Homo sap...    29   2.2  
gi|32455260 peroxiredoxin 5 isoform b precursor [Homo sapiens]         29   2.9  
gi|6912238 peroxiredoxin 5 isoform a precursor [Homo sapiens]          29   2.9  
gi|187608777 NF-kappa-B inhibitor-like protein 2 [Homo sapiens]        29   2.9  
gi|118498337 HECT domain containing 1 [Homo sapiens]                   29   2.9  
gi|225543215 antigen identified by monoclonal antibody Ki-67 iso...    28   3.7  
gi|103472005 antigen identified by monoclonal antibody Ki-67 iso...    28   3.7  
gi|148491106 zinc finger protein 295 isoform S [Homo sapiens]          28   4.9  
gi|148491088 zinc finger protein 295 isoform L [Homo sapiens]          28   4.9  
gi|50345873 zinc finger protein 295 isoform L [Homo sapiens]           28   4.9  
gi|7705726 thioredoxin domain containing 14 isoform 1 [Homo sapi...    28   4.9  
gi|221136848 neuroblastoma breakpoint family, member 6 isoform 2...    28   6.4  
gi|221136844 neuroblastoma breakpoint family, member 6 isoform 1...    28   6.4  

>gi|38708309 PPPDE peptidase domain containing 1 [Homo sapiens]
          Length = 194

 Score =  397 bits (1021), Expect = e-111
 Identities = 194/194 (100%), Positives = 194/194 (100%)

Query: 1   MGANQLVVLNVYDMYWMNEYTSSIGIGVFHSGIEVYGREFAYGGHPYPFSGIFEISPGNA 60
           MGANQLVVLNVYDMYWMNEYTSSIGIGVFHSGIEVYGREFAYGGHPYPFSGIFEISPGNA
Sbjct: 1   MGANQLVVLNVYDMYWMNEYTSSIGIGVFHSGIEVYGREFAYGGHPYPFSGIFEISPGNA 60

Query: 61  SELGETFKFKEAVVLGSTDFLEDDIEKIVEELGKEYKGNAYHLMHKNCNHFSSALSEILC 120
           SELGETFKFKEAVVLGSTDFLEDDIEKIVEELGKEYKGNAYHLMHKNCNHFSSALSEILC
Sbjct: 61  SELGETFKFKEAVVLGSTDFLEDDIEKIVEELGKEYKGNAYHLMHKNCNHFSSALSEILC 120

Query: 121 GKEIPRWINRLAYFSSCIPFLQSCLPKEWLTPAALQSSVSQELQDELEEAEDAAASASVA 180
           GKEIPRWINRLAYFSSCIPFLQSCLPKEWLTPAALQSSVSQELQDELEEAEDAAASASVA
Sbjct: 121 GKEIPRWINRLAYFSSCIPFLQSCLPKEWLTPAALQSSVSQELQDELEEAEDAAASASVA 180

Query: 181 STAAGSRPGRHTKL 194
           STAAGSRPGRHTKL
Sbjct: 181 STAAGSRPGRHTKL 194


>gi|239757398 PREDICTED: similar to CGI-146 protein [Homo sapiens]
          Length = 118

 Score =  231 bits (588), Expect = 4e-61
 Identities = 112/118 (94%), Positives = 113/118 (95%), Gaps = 1/118 (0%)

Query: 1   MGANQLVVLNVYDMYWMNEYTSSIGIGVFHSGIEVYGREFAYGGHPYPFSGIFEISPGNA 60
           MGANQLVVLNVYDMYWM EYTSSIGIGVFHS IEVYGREFAYGGHPYPFSGIFEISPGNA
Sbjct: 1   MGANQLVVLNVYDMYWMKEYTSSIGIGVFHSEIEVYGREFAYGGHPYPFSGIFEISPGNA 60

Query: 61  SELGETFKFKEAVVLGSTDFLEDDIEKIVEELGKEYKGNAYHLMHKNCNHFSSALSEI 118
           SELGE FKFKE VVLGSTDFLEDDIEKIVEELGKEYKGN YHLMHKNCNHFSSALSE+
Sbjct: 61  SELGEPFKFKE-VVLGSTDFLEDDIEKIVEELGKEYKGNVYHLMHKNCNHFSSALSEV 117


>gi|239751890 PREDICTED: hypothetical protein XP_002348023 [Homo
           sapiens]
          Length = 118

 Score =  227 bits (579), Expect = 4e-60
 Identities = 111/118 (94%), Positives = 112/118 (94%), Gaps = 1/118 (0%)

Query: 1   MGANQLVVLNVYDMYWMNEYTSSIGIGVFHSGIEVYGREFAYGGHPYPFSGIFEISPGNA 60
           MGANQLVVLNV DMYWM EYTSSIGIGVFHS IEVYGREFAYGGHPYPFSGIFEISPGNA
Sbjct: 1   MGANQLVVLNVCDMYWMKEYTSSIGIGVFHSEIEVYGREFAYGGHPYPFSGIFEISPGNA 60

Query: 61  SELGETFKFKEAVVLGSTDFLEDDIEKIVEELGKEYKGNAYHLMHKNCNHFSSALSEI 118
           SELGE FKFKE VVLGSTDFLEDDIEKIVEELGKEYKGN YHLMHKNCNHFSSALSE+
Sbjct: 61  SELGEPFKFKE-VVLGSTDFLEDDIEKIVEELGKEYKGNVYHLMHKNCNHFSSALSEV 117


>gi|239746380 PREDICTED: hypothetical protein XP_002343701 [Homo
           sapiens]
          Length = 118

 Score =  227 bits (579), Expect = 4e-60
 Identities = 111/118 (94%), Positives = 112/118 (94%), Gaps = 1/118 (0%)

Query: 1   MGANQLVVLNVYDMYWMNEYTSSIGIGVFHSGIEVYGREFAYGGHPYPFSGIFEISPGNA 60
           MGANQLVVLNV DMYWM EYTSSIGIGVFHS IEVYGREFAYGGHPYPFSGIFEISPGNA
Sbjct: 1   MGANQLVVLNVCDMYWMKEYTSSIGIGVFHSEIEVYGREFAYGGHPYPFSGIFEISPGNA 60

Query: 61  SELGETFKFKEAVVLGSTDFLEDDIEKIVEELGKEYKGNAYHLMHKNCNHFSSALSEI 118
           SELGE FKFKE VVLGSTDFLEDDIEKIVEELGKEYKGN YHLMHKNCNHFSSALSE+
Sbjct: 61  SELGEPFKFKE-VVLGSTDFLEDDIEKIVEELGKEYKGNVYHLMHKNCNHFSSALSEV 117


>gi|63055040 PPPDE peptidase domain containing 2 [Homo sapiens]
          Length = 168

 Score = 57.4 bits (137), Expect = 8e-09
 Identities = 39/121 (32%), Positives = 61/121 (50%), Gaps = 10/121 (8%)

Query: 27  GVFHSGIEVYGREFAYGGHPYPFSGIFEISPGNASELGETFKFKEAVVLGSTDFLEDDIE 86
           G++H+ I V+  EF +G       GI    PG    LG        V +GST+  E+   
Sbjct: 35  GIWHTSIVVHKDEFFFGS-----GGISSCPPGGTL-LGPP---DSVVDVGSTEVTEEIFL 85

Query: 87  KIVEELGKE-YKGNAYHLMHKNCNHFSSALSEILCGKEIPRWINRLAYFSSCIPFLQSCL 145
           + +  LG+  ++G AY+L   NCN FS+ +++ L G++IP +I  L       PF Q+  
Sbjct: 86  EYLSSLGESLFRGEAYNLFEHNCNTFSNEVAQFLTGRKIPSYITDLPSEVLSTPFGQALR 145

Query: 146 P 146
           P
Sbjct: 146 P 146


>gi|4503811 fucosyltransferase 4 [Homo sapiens]
          Length = 530

 Score = 31.2 bits (69), Expect = 0.58
 Identities = 13/45 (28%), Positives = 27/45 (60%)

Query: 146 PKEWLTPAALQSSVSQELQDELEEAEDAAASASVASTAAGSRPGR 190
           P +W  P  +Q+  ++E+   + + E+AAA+A   +T++   PG+
Sbjct: 246 PPDWPPPWGIQAHTAEEVDLRVLDYEEAAAAAEALATSSPRPPGQ 290


>gi|32484979 adaptor-related protein complex 3, beta 1 subunit [Homo
           sapiens]
          Length = 1094

 Score = 31.2 bits (69), Expect = 0.58
 Identities = 19/47 (40%), Positives = 29/47 (61%), Gaps = 3/47 (6%)

Query: 145 LPKEWLTPA--ALQSSVSQELQDELEEAEDAAASASVASTAAGSRPG 189
           L KEW TPA  A Q + +++   E EE ED++ S+S + + +GS  G
Sbjct: 656 LAKEW-TPAGKAKQENSAKKFYSESEEEEDSSDSSSDSESESGSESG 701


>gi|217272874 coiled-coil domain containing 37 [Homo sapiens]
          Length = 611

 Score = 30.4 bits (67), Expect = 0.99
 Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 4/67 (5%)

Query: 123 EIPRWINRLAYFSSCIPFLQSCLPKEWLTPAALQSSVSQELQDELEEAEDAAASASVAST 182
           EI R+ + L ++     FL    PKEWL     +         + +E  +A+  +SV ST
Sbjct: 245 EISRFEDTLKHYKVYKDFLYKLSPKEWLE----EQEKKHSFLKKAKEVSEASKESSVNST 300

Query: 183 AAGSRPG 189
                PG
Sbjct: 301 PGDKGPG 307


>gi|62526031 neurochondrin isoform 2 [Homo sapiens]
          Length = 712

 Score = 29.6 bits (65), Expect = 1.7
 Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 6/37 (16%)

Query: 127 WINRLAYFSSCIPFLQSCLPKEWLTPAALQSSVSQEL 163
           W   +  F+ C+P L       WL PAAL+S   QEL
Sbjct: 620 WFLGMQAFTGCVPLLP------WLAPAALRSRWPQEL 650


>gi|24307949 neurochondrin isoform 1 [Homo sapiens]
          Length = 729

 Score = 29.6 bits (65), Expect = 1.7
 Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 6/37 (16%)

Query: 127 WINRLAYFSSCIPFLQSCLPKEWLTPAALQSSVSQEL 163
           W   +  F+ C+P L       WL PAAL+S   QEL
Sbjct: 637 WFLGMQAFTGCVPLLP------WLAPAALRSRWPQEL 667


>gi|62526029 neurochondrin isoform 1 [Homo sapiens]
          Length = 729

 Score = 29.6 bits (65), Expect = 1.7
 Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 6/37 (16%)

Query: 127 WINRLAYFSSCIPFLQSCLPKEWLTPAALQSSVSQEL 163
           W   +  F+ C+P L       WL PAAL+S   QEL
Sbjct: 637 WFLGMQAFTGCVPLLP------WLAPAALRSRWPQEL 667


>gi|238859658 LIM and senescent cell antigen-like domains 2 isoform
           1 [Homo sapiens]
          Length = 363

 Score = 29.3 bits (64), Expect = 2.2
 Identities = 15/52 (28%), Positives = 23/52 (44%), Gaps = 9/52 (17%)

Query: 88  IVEELGKEYKGNAYHLMHKNCNHFSSALSEILCGKEIPRWINRLAYFSSCIP 139
           +++E    ++ +AYH  H NC H         CGKE+      L     C+P
Sbjct: 168 VIDEQPLMFRSDAYHPDHFNCTH---------CGKELTAEARELKGELYCLP 210


>gi|238776788 LIM and senescent cell antigen-like domains 2 isoform
           5 [Homo sapiens]
          Length = 336

 Score = 29.3 bits (64), Expect = 2.2
 Identities = 15/52 (28%), Positives = 23/52 (44%), Gaps = 9/52 (17%)

Query: 88  IVEELGKEYKGNAYHLMHKNCNHFSSALSEILCGKEIPRWINRLAYFSSCIP 139
           +++E    ++ +AYH  H NC H         CGKE+      L     C+P
Sbjct: 141 VIDEQPLMFRSDAYHPDHFNCTH---------CGKELTAEARELKGELYCLP 183


>gi|238776786 LIM and senescent cell antigen-like domains 2 isoform
           3 [Homo sapiens]
          Length = 341

 Score = 29.3 bits (64), Expect = 2.2
 Identities = 15/52 (28%), Positives = 23/52 (44%), Gaps = 9/52 (17%)

Query: 88  IVEELGKEYKGNAYHLMHKNCNHFSSALSEILCGKEIPRWINRLAYFSSCIP 139
           +++E    ++ +AYH  H NC H         CGKE+      L     C+P
Sbjct: 146 VIDEQPLMFRSDAYHPDHFNCTH---------CGKELTAEARELKGELYCLP 188


>gi|40804748 LIM and senescent cell antigen-like domains 2 isoform 2
           [Homo sapiens]
          Length = 365

 Score = 29.3 bits (64), Expect = 2.2
 Identities = 15/52 (28%), Positives = 23/52 (44%), Gaps = 9/52 (17%)

Query: 88  IVEELGKEYKGNAYHLMHKNCNHFSSALSEILCGKEIPRWINRLAYFSSCIP 139
           +++E    ++ +AYH  H NC H         CGKE+      L     C+P
Sbjct: 170 VIDEQPLMFRSDAYHPDHFNCTH---------CGKELTAEARELKGELYCLP 212


>gi|193083163 roundabout, axon guidance receptor, homolog 2 isoform
            ROBO2a [Homo sapiens]
          Length = 1394

 Score = 29.3 bits (64), Expect = 2.2
 Identities = 13/36 (36%), Positives = 20/36 (55%)

Query: 149  WLTPAALQSSVSQELQDELEEAEDAAASASVASTAA 184
            W  P  +Q+ + Q L+DELEE +D   +  V   A+
Sbjct: 1120 WCPPLPVQTYLHQGLEDELEEDDDRVPTPPVRGVAS 1155


>gi|61888896 roundabout, axon guidance receptor, homolog 2 isoform
            ROBO2b [Homo sapiens]
          Length = 1378

 Score = 29.3 bits (64), Expect = 2.2
 Identities = 13/36 (36%), Positives = 20/36 (55%)

Query: 149  WLTPAALQSSVSQELQDELEEAEDAAASASVASTAA 184
            W  P  +Q+ + Q L+DELEE +D   +  V   A+
Sbjct: 1104 WCPPLPVQTYLHQGLEDELEEDDDRVPTPPVRGVAS 1139


>gi|109134349 coatomer protein complex, subunit gamma 2 [Homo
           sapiens]
          Length = 871

 Score = 29.3 bits (64), Expect = 2.2
 Identities = 13/34 (38%), Positives = 21/34 (61%)

Query: 62  ELGETFKFKEAVVLGSTDFLEDDIEKIVEELGKE 95
           E+G+TF+ +E   L ST  LE+ +  I+  LG +
Sbjct: 775 EVGDTFEKEETFALSSTKTLEEAVNNIITFLGMQ 808


>gi|32455260 peroxiredoxin 5 isoform b precursor [Homo sapiens]
          Length = 170

 Score = 28.9 bits (63), Expect = 2.9
 Identities = 14/33 (42%), Positives = 17/33 (51%)

Query: 44 GHPYPFSGIFEISPGNASELGETFKFKEAVVLG 76
          G   P   +FE  PGN   L E FK K+ V+ G
Sbjct: 59 GDAIPAVEVFEGEPGNKVNLAELFKGKKGVLFG 91


>gi|6912238 peroxiredoxin 5 isoform a precursor [Homo sapiens]
          Length = 214

 Score = 28.9 bits (63), Expect = 2.9
 Identities = 14/33 (42%), Positives = 17/33 (51%)

Query: 44 GHPYPFSGIFEISPGNASELGETFKFKEAVVLG 76
          G   P   +FE  PGN   L E FK K+ V+ G
Sbjct: 59 GDAIPAVEVFEGEPGNKVNLAELFKGKKGVLFG 91


>gi|187608777 NF-kappa-B inhibitor-like protein 2 [Homo sapiens]
          Length = 1378

 Score = 28.9 bits (63), Expect = 2.9
 Identities = 36/123 (29%), Positives = 54/123 (43%), Gaps = 7/123 (5%)

Query: 64  GETFKFKEAVVLGSTDFLEDDIEKIVEELGKEYKGNAYHLMHKNCNHFSSALSEILCGKE 123
           G    ++E + L S + LE+    +   L +E  G+AY L+   C  F  ALS   C ++
Sbjct: 370 GAVRHYEEELRLRSGNVLEEAKTWLNIALSREEAGDAYELLAP-C--FQKALS---CAQQ 423

Query: 124 IPRWINRLAYFSSCIPFLQSCLPKEWL-TPAALQSSVSQELQDELEEAEDAAASASVAST 182
             R   +               P+E   T   L+     E +DE EEAE+AAA+A   + 
Sbjct: 424 AQRPQLQRQVLQHLHTVQLRLQPQEAPETETRLRELSVAEDEDEEEEAEEAAATAESEAL 483

Query: 183 AAG 185
            AG
Sbjct: 484 EAG 486


>gi|118498337 HECT domain containing 1 [Homo sapiens]
          Length = 2610

 Score = 28.9 bits (63), Expect = 2.9
 Identities = 27/110 (24%), Positives = 45/110 (40%), Gaps = 24/110 (21%)

Query: 102 HLMHKNCNHFSSALSEILCGKEIPRWINRLAYFSS------------------CIPFLQS 143
           HL+HK+  H + A+   LCGK  P+  +      S                  C   L  
Sbjct: 156 HLVHKDTLHSAMAVVSRLCGKMEPQDSSLEICVESLSSLLKHEDHQVSDGALRCFASLAD 215

Query: 144 CLPKEWLTPAAL-QSSVSQELQDELEEAEDAAASASVASTAAGSRPGRHT 192
              +  + PA L +  +++EL   +     AAA  +V+  ++  +PGR T
Sbjct: 216 RFTRRGVDPAPLAKHGLTEELLSRM-----AAAGGTVSGPSSACKPGRST 260


>gi|225543215 antigen identified by monoclonal antibody Ki-67
           isoform 2 [Homo sapiens]
          Length = 2896

 Score = 28.5 bits (62), Expect = 3.7
 Identities = 17/72 (23%), Positives = 35/72 (48%)

Query: 32  GIEVYGREFAYGGHPYPFSGIFEISPGNASELGETFKFKEAVVLGSTDFLEDDIEKIVEE 91
           GI +  R  ++GGH  P      + P    + GE    ++++V+ +   L+  I++  + 
Sbjct: 138 GIPLKRRRVSFGGHLRPELFDENLPPNTPLKRGEAPTKRKSLVMHTPPVLKKIIKEQPQP 197

Query: 92  LGKEYKGNAYHL 103
            GK+  G+  H+
Sbjct: 198 SGKQESGSEIHV 209


>gi|103472005 antigen identified by monoclonal antibody Ki-67
           isoform 1 [Homo sapiens]
          Length = 3256

 Score = 28.5 bits (62), Expect = 3.7
 Identities = 17/72 (23%), Positives = 35/72 (48%)

Query: 32  GIEVYGREFAYGGHPYPFSGIFEISPGNASELGETFKFKEAVVLGSTDFLEDDIEKIVEE 91
           GI +  R  ++GGH  P      + P    + GE    ++++V+ +   L+  I++  + 
Sbjct: 498 GIPLKRRRVSFGGHLRPELFDENLPPNTPLKRGEAPTKRKSLVMHTPPVLKKIIKEQPQP 557

Query: 92  LGKEYKGNAYHL 103
            GK+  G+  H+
Sbjct: 558 SGKQESGSEIHV 569


>gi|148491106 zinc finger protein 295 isoform S [Homo sapiens]
          Length = 865

 Score = 28.1 bits (61), Expect = 4.9
 Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 3/43 (6%)

Query: 143 SCLPKEWLTPAALQSSVSQELQDELEEAEDAAASASVASTAAG 185
           SCLP++      L+  V +E    +EEAE+ A  AS A   AG
Sbjct: 661 SCLPEDLSLSKQLKIQVKEE---PVEEAEEEAPEASTAPKEAG 700


>gi|148491088 zinc finger protein 295 isoform L [Homo sapiens]
          Length = 1066

 Score = 28.1 bits (61), Expect = 4.9
 Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 3/43 (6%)

Query: 143 SCLPKEWLTPAALQSSVSQELQDELEEAEDAAASASVASTAAG 185
           SCLP++      L+  V +E    +EEAE+ A  AS A   AG
Sbjct: 862 SCLPEDLSLSKQLKIQVKEE---PVEEAEEEAPEASTAPKEAG 901


>gi|50345873 zinc finger protein 295 isoform L [Homo sapiens]
          Length = 1066

 Score = 28.1 bits (61), Expect = 4.9
 Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 3/43 (6%)

Query: 143 SCLPKEWLTPAALQSSVSQELQDELEEAEDAAASASVASTAAG 185
           SCLP++      L+  V +E    +EEAE+ A  AS A   AG
Sbjct: 862 SCLPEDLSLSKQLKIQVKEE---PVEEAEEEAPEASTAPKEAG 901


>gi|7705726 thioredoxin domain containing 14 isoform 1 [Homo
           sapiens]
          Length = 296

 Score = 28.1 bits (61), Expect = 4.9
 Identities = 12/38 (31%), Positives = 21/38 (55%)

Query: 131 LAYFSSCIPFLQSCLPKEWLTPAALQSSVSQELQDELE 168
           L Y + CI FL +C P  ++ P  ++    + + +ELE
Sbjct: 114 LLYITLCIVFLMTCKPPLYMGPEYIKYFNDKTIDEELE 151


>gi|221136848 neuroblastoma breakpoint family, member 6 isoform 2
           [Homo sapiens]
          Length = 638

 Score = 27.7 bits (60), Expect = 6.4
 Identities = 21/91 (23%), Positives = 38/91 (41%), Gaps = 15/91 (16%)

Query: 85  IEKIVEELGKEYKGNAYH-LMHKNCNHFSSALSEILCGKEIPRWINRLAYFSSCIPFLQS 143
           +EK+ E+L +  +   Y  L+H      +    ++  G++  RW+N+             
Sbjct: 79  MEKLAEKLRQAEELRQYKALVHSQAKELTQLREKLREGRDASRWLNKHL----------- 127

Query: 144 CLPKEWLTPAALQSSVSQELQDELEEAEDAA 174
              K  LTP     S  Q+L+++L E    A
Sbjct: 128 ---KTLLTPDDPDKSQGQDLREQLAEGHRLA 155


>gi|221136844 neuroblastoma breakpoint family, member 6 isoform 1
           [Homo sapiens]
          Length = 667

 Score = 27.7 bits (60), Expect = 6.4
 Identities = 21/91 (23%), Positives = 38/91 (41%), Gaps = 15/91 (16%)

Query: 85  IEKIVEELGKEYKGNAYH-LMHKNCNHFSSALSEILCGKEIPRWINRLAYFSSCIPFLQS 143
           +EK+ E+L +  +   Y  L+H      +    ++  G++  RW+N+             
Sbjct: 79  MEKLAEKLRQAEELRQYKALVHSQAKELTQLREKLREGRDASRWLNKHL----------- 127

Query: 144 CLPKEWLTPAALQSSVSQELQDELEEAEDAA 174
              K  LTP     S  Q+L+++L E    A
Sbjct: 128 ---KTLLTPDDPDKSQGQDLREQLAEGHRLA 155


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.133    0.400 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,568,293
Number of Sequences: 37866
Number of extensions: 322327
Number of successful extensions: 1170
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 1150
Number of HSP's gapped (non-prelim): 35
length of query: 194
length of database: 18,247,518
effective HSP length: 97
effective length of query: 97
effective length of database: 14,574,516
effective search space: 1413728052
effective search space used: 1413728052
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.