OPN5 27120

Name: OPN5	Sequence: fasta or formatted (354aa)		NCBI GI: 38678524
Description: opsin 5 isoform 1		Referenced in: Photoreceptors and Related Functions
Other entries for this name: alt prot [189aa] opsin 5 isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.5 30 2 C cysteine 3.4 12 2 D aspartate 3.1 11 1 E glutamate 3.1 11 2 F phenylalanine 5.6 20 3 G glycine 6.8 24 2 H histidine 2.5 9 1 I isoleucine 7.9 28 2 K lysine 5.9 21 3 L leucine 10.7 38 3 M methionine 2.3 8 1 N asparagine 1.4 5 1 P proline 4.0 14 1 Q glutamine 1.7 6 1 R arginine 3.7 13 2 S serine 7.9 28 3 T threonine 5.4 19 2 V valine 7.9 28 2 W tryptophan 3.7 13 2 Y tyrosine 4.5 16 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 opsin 5 isoform 1 OPN5 0.503 opsin 5 isoform 2 RRH 0.201 peropsin OPN4 0.189 opsin 4 isoform 1 OPN4 0.179 opsin 4 isoform 2 OPN3 0.165 opsin 3 RHO 0.143 rhodopsin OPN1MW2 0.140 opsin 1 (cone pigments), medium-wave-sensitive 2 [H... OPN1MW 0.140 opsin 1 (cone pigments), medium-wave-sensitive OPN1LW 0.137 opsin 1 (cone pigments), long-wave-sensitive OPN1SW 0.119 opsin 1 (cone pigments), short-wave-sensitive RGR 0.110 retinal G-protein coupled receptor isoform 1 RGR 0.110 retinal G-protein coupled receptor isoform 2 SSTR2 0.089 somatostatin receptor 2 RGR 0.085 retinal G-protein coupled receptor isoform 3 SSTR1 0.082 somatostatin receptor 1 SSTR4 0.082 somatostatin receptor 4 NPY2R 0.081 neuropeptide Y receptor Y2 SSTR5 0.078 somatostatin receptor 5 SSTR3 0.076 somatostatin receptor 3 OPRL1 0.075 opiate receptor-like 1 OPRL1 0.075 opiate receptor-like 1 TACR2 0.073 tachykinin receptor 2 MTNR1A 0.073 melatonin receptor 1A TACR1 0.071 tachykinin receptor 1 isoform long GALR1 0.071 galanin receptor 1 CYSLTR1 0.071 cysteinyl leukotriene receptor 1 TAAR9 0.071 trace amine associated receptor 9 TACR1 0.069 tachykinin receptor 1 isoform short OPRK1 0.069 opioid receptor, kappa 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.