Guide to the Human Genome
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Name: TARSL2 Sequence: fasta or formatted (802aa) NCBI GI: 38570111
Description:

threonyl-tRNA synthetase-like 2

Referenced in:

tRNA Enzymes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.7         54           2
 C cysteine            2.2         18           1
 D aspartate           5.0         40           2
 E glutamate          10.1         81           3
 F phenylalanine       5.2         42           3
 G glycine             5.2         42           2
 H histidine           2.6         21           1
 I isoleucine          6.2         50           2
 K lysine              7.0         56           4
 L leucine             9.1         73           3
 M methionine          2.5         20           2
 N asparagine          4.4         35           1
 P proline             4.0         32           3
 Q glutamine           4.5         36           2
 R arginine            5.9         47           2
 S serine              5.7         46           2
 T threonine           4.5         36           3
 V valine              4.4         35           2
 W tryptophan          1.7         14           1
 Y tyrosine            3.0         24           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   threonyl-tRNA synthetase-like 2 
TARS                  0.661   threonyl-tRNA synthetase 
TARS2                 0.460   threonyl-tRNA synthetase 2, mitochondrial 
MRPL39                0.037   mitochondrial ribosomal protein L39 isoform b 
MRPL39                0.037   mitochondrial ribosomal protein L39 isoform a 
FHAD1                 0.009   forkhead-associated (FHA) phosphopeptide binding do...
CNTROB                0.009   centrobin, centrosomal BRCA2 interacting protein is...
CNTROB                0.009   centrobin, centrosomal BRCA2 interacting protein iso...
RARS                  0.007   arginyl-tRNA synthetase 
ODF2L                 0.007   outer dense fiber of sperm tails 2-like isoform b [H...
ODF2L                 0.007   outer dense fiber of sperm tails 2-like isoform a [H...
DCTN1                 0.006   dynactin 1 isoform 4 
DCTN1                 0.006   dynactin 1 isoform 3 
DCTN1                 0.006   dynactin 1 isoform 2 
DCTN1                 0.006   dynactin 1 isoform 1 
CCDC88A               0.006   coiled-coil domain containing 88A isoform 2 
CCDC88A               0.006   coiled-coil domain containing 88A isoform 1 
JAKMIP2               0.005   Janus kinase and microtubule interacting protein 2 [...
PDE4DIP               0.005   phosphodiesterase 4D interacting protein isoform 1 ...
PLEC1                 0.005   plectin 1 isoform 11 
PLEC1                 0.005   plectin 1 isoform 10 
PLEC1                 0.005   plectin 1 isoform 8 
PLEC1                 0.005   plectin 1 isoform 7 
PLEC1                 0.005   plectin 1 isoform 6 
PLEC1                 0.005   plectin 1 isoform 3 
PLEC1                 0.005   plectin 1 isoform 2 
PLEC1                 0.005   plectin 1 isoform 1 
JAKMIP3               0.005   Janus kinase and microtubule interacting protein 3 ...
CEP250                0.005   centrosomal protein 2 
LOC730658             0.005   PREDICTED: similar to UPF0634 protein KIAA1641 [Hom...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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