Guide to the Human Genome
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Name: C10orf96 Sequence: fasta or formatted (258aa) NCBI GI: 38348344
Description:

hypothetical protein LOC374355

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.5          9           1
 C cysteine            1.2          3           1
 D aspartate           3.9         10           2
 E glutamate          18.6         48           3
 F phenylalanine       4.7         12           2
 G glycine             0.0          0           0
 H histidine           1.9          5           1
 I isoleucine          7.0         18           2
 K lysine             12.4         32           2
 L leucine            12.0         31           2
 M methionine          3.5          9           1
 N asparagine          4.7         12           2
 P proline             0.4          1           1
 Q glutamine           7.0         18           2
 R arginine            3.9         10           2
 S serine              6.6         17           2
 T threonine           5.0         13           2
 V valine              1.9          5           1
 W tryptophan          0.0          0           0
 Y tyrosine            1.9          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC374355 
MYH9                  0.082   myosin, heavy polypeptide 9, non-muscle 
ERC1                  0.070   RAB6-interacting protein 2 isoform epsilon 
MYO5A                 0.068   myosin VA isoform 2 
MYO5A                 0.068   myosin VA isoform 1 
CCDC88A               0.068   coiled-coil domain containing 88A isoform 2 
CCDC88A               0.068   coiled-coil domain containing 88A isoform 1 
MYH14                 0.068   myosin, heavy chain 14 isoform 1 
MYH14                 0.068   myosin, heavy chain 14 isoform 2 
MYH14                 0.068   myosin, heavy chain 14 isoform 3 
MYH10                 0.066   myosin, heavy polypeptide 10, non-muscle 
CENPF                 0.063   centromere protein F 
GOLGA4                0.063   golgi autoantigen, golgin subfamily a, 4 
PPFIBP2               0.061   PTPRF interacting protein, binding protein 2 (lipri...
FHAD1                 0.061   forkhead-associated (FHA) phosphopeptide binding do...
AKAP9                 0.061   A-kinase anchor protein 9 isoform 3 
RB1CC1                0.061   Rb1-inducible coiled coil protein 1 isoform 2 [Homo...
RB1CC1                0.061   Rb1-inducible coiled coil protein 1 isoform 1 [Homo...
CEP110                0.061   centrosomal protein 110kDa 
CCDC30                0.059   coiled-coil domain containing 30 
FILIP1                0.059   filamin A interacting protein 1 
FAM184A               0.059   hypothetical protein LOC79632 isoform 2 
FAM184A               0.059   hypothetical protein LOC79632 isoform 1 
LOC400352             0.057   PREDICTED: similar to Putative golgin subfamily A m...
LOC100132816          0.057   PREDICTED: similar to Putative golgin subfamily A m...
CCDC39                0.057   coiled-coil domain containing 39 
ANKRD18A              0.057   PREDICTED: ankyrin repeat domain 18A 
ANKRD18A              0.057   PREDICTED: ankyrin repeat domain 18A 
ANKRD18A              0.057   PREDICTED: ankyrin repeat domain 18A 
CCDC158               0.057   coiled-coil domain containing 158 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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