Guide to the Human Genome
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Name: ZNF444 Sequence: fasta or formatted (327aa) NCBI GI: 37537687
Description:

zinc finger protein 444

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.6         38           3
 C cysteine            3.4         11           2
 D aspartate           3.1         10           1
 E glutamate           7.3         24           2
 F phenylalanine       2.8          9           1
 G glycine            11.0         36           3
 H histidine           5.2         17           1
 I isoleucine          0.6          2           1
 K lysine              4.0         13           1
 L leucine             9.2         30           2
 M methionine          0.9          3           1
 N asparagine          0.0          0           0
 P proline            12.2         40           2
 Q glutamine           4.0         13           1
 R arginine            8.6         28           2
 S serine              5.8         19           2
 T threonine           3.7         12           2
 V valine              4.0         13           1
 W tryptophan          2.1          7           1
 Y tyrosine            0.6          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 444 
ZSCAN22               0.253   zinc finger and SCAN domain containing 22 
ZNF232                0.222   zinc finger protein 232 
ZSCAN2                0.212   zinc finger protein 29 isoform 1 
ZNF187                0.194   zinc finger protein 187 isoform a 
ZNF187                0.192   zinc finger protein 187 isoform b 
ZNF500                0.167   zinc finger protein 500 
ZKSCAN5               0.158   zinc finger with KRAB and SCAN domains 5 
ZKSCAN5               0.158   zinc finger with KRAB and SCAN domains 5 
ZNF497                0.158   zinc finger protein 497 
ZNF629                0.154   zinc finger protein 629 
PRDM9                 0.154   PR domain containing 9 
ZNF467                0.154   zinc finger protein 467 
ZNF697                0.152   zinc finger protein 697 
ZFP92                 0.151   zinc finger protein 92 homolog 
ZNF777                0.151   zinc finger protein 777 
ZNF436                0.151   zinc finger protein 436 
ZNF436                0.151   zinc finger protein 436 
ZNF534                0.149   zinc finger protein 534 isoform 2 
ZNF534                0.149   zinc finger protein 534 isoform 1 
ZNF837                0.146   zinc finger protein 837 isoform 1 
ZNF837                0.146   zinc finger protein 837 isoform 2 
ZNF835                0.146   zinc finger protein 835 
ZNF48                 0.146   zinc finger protein 48 
ZNF358                0.146   zinc finger protein 358 
LOC100291520          0.143   PREDICTED: hypothetical protein XP_002347973 isofor...
LOC100291520          0.143   PREDICTED: hypothetical protein XP_002347974 isofor...
LOC100291520          0.143   PREDICTED: hypothetical protein XP_002347975 isofor...
ZNF594                0.143   zinc finger protein 594 
ZNF774                0.143   zinc finger protein 774 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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